Citrus Sinensis ID: 003049
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 853 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LT02 | 1179 | Probable cation-transport | yes | no | 0.976 | 0.706 | 0.811 | 0.0 | |
| Q9HD20 | 1204 | Probable cation-transport | yes | no | 0.927 | 0.656 | 0.457 | 0.0 | |
| Q9EPE9 | 1200 | Probable cation-transport | yes | no | 0.926 | 0.658 | 0.454 | 0.0 | |
| P39986 | 1215 | Probable cation-transport | yes | no | 0.941 | 0.660 | 0.433 | 1e-178 | |
| P90747 | 1178 | Probable cation-transport | yes | no | 0.928 | 0.672 | 0.436 | 1e-177 | |
| O14072 | 1211 | Cation-transporting ATPas | yes | no | 0.929 | 0.654 | 0.428 | 1e-177 | |
| O74431 | 1315 | Probable cation-transport | no | no | 0.744 | 0.482 | 0.299 | 2e-82 | |
| Q12697 | 1472 | Vacuolar cation-transport | no | no | 0.742 | 0.430 | 0.287 | 1e-78 | |
| Q5XF89 | 1219 | Probable cation-transport | no | no | 0.764 | 0.534 | 0.298 | 7e-76 | |
| Q9H7F0 | 1226 | Probable cation-transport | no | no | 0.745 | 0.518 | 0.294 | 4e-74 |
| >sp|Q9LT02|ATY1_ARATH Probable cation-transporting ATPase OS=Arabidopsis thaliana GN=At5g23630 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 1407 bits (3642), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 678/835 (81%), Positives = 739/835 (88%), Gaps = 2/835 (0%)
Query: 1 MLSFHVGGKVVDRVDLLRKKHWVWRLDVWPFAILYSGWLIAIVPSIDFGDAAIVLGGLVA 60
M SF VGGKVV++VDL RKK VWRLDVWPFAILY+ WL IVPSIDF DA I LGGL A
Sbjct: 1 MSSFRVGGKVVEKVDLCRKKQLVWRLDVWPFAILYTVWLTTIVPSIDFSDACIALGGLSA 60
Query: 61 FHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSST 120
FHILV LFT WSVDFKCF +SK+N I ADACK+TP KF GSKEVVPL F Q S++
Sbjct: 61 FHILVLLFTTWSVDFKCFVQFSKVNSIDQADACKVTPAKFSGSKEVVPLHFRSQMTDSAS 120
Query: 121 PVDEDEICFDFRKQHFIYSREKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGR 180
D +EI FDFRKQ FIYS+E G F KLPYPTKETFG+YLKCTGH TEAKIA ATEKWGR
Sbjct: 121 SGDMEEIFFDFRKQRFIYSKELGAFSKLPYPTKETFGHYLKCTGHGTEAKIATATEKWGR 180
Query: 181 NVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 240
NVF+YPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDE+WYYS+FTLFMLFMFESTMAKSR
Sbjct: 181 NVFDYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEFWYYSVFTLFMLFMFESTMAKSR 240
Query: 241 LKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTG-EDKSVPADML 299
LKTLT++R VRVD+QT+MV+R GKWVKL GTDL+PGDVVSIGR S QTG EDK+VPADML
Sbjct: 241 LKTLTDLRSVRVDSQTVMVYRSGKWVKLLGTDLLPGDVVSIGRPSTQTGGEDKTVPADML 300
Query: 300 ILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFP 359
+L GSAIVNEAILTGESTPQWKV I+G+ + EKLS +R+K+HVLFGGTKILQH+PDK+F
Sbjct: 301 LLVGSAIVNEAILTGESTPQWKVPIVGQRSDEKLSIKRNKNHVLFGGTKILQHSPDKSFS 360
Query: 360 LKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYV 419
LKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYV
Sbjct: 361 LKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYV 420
Query: 420 LKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIP 479
L KG+EDPTRSKYKL L CSLIITSVIPPELPMELSIAVNTSL+AL RRGIFCTEPFRIP
Sbjct: 421 LVKGLEDPTRSKYKLLLGCSLIITSVIPPELPMELSIAVNTSLLALVRRGIFCTEPFRIP 480
Query: 480 FAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAE-LEDDMTKVPVRTQEILASCHALVFVD 538
FAGKVD+CCFDKTGTLTSDDMEFRGV GLSN E E DM+KVPVRT EILASCHALVFV+
Sbjct: 481 FAGKVDLCCFDKTGTLTSDDMEFRGVGGLSNCEEAETDMSKVPVRTLEILASCHALVFVE 540
Query: 539 NKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEE 598
NKLVGDPLEKAALKGIDWSYK+DEKA+P+RG GN+VQI+QR+HFASHLKRMSV+VR+QEE
Sbjct: 541 NKLVGDPLEKAALKGIDWSYKADEKALPRRGNGNSVQIMQRYHFASHLKRMSVIVRIQEE 600
Query: 599 FFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDE 658
+ AFVKGAPETIQ+RL D+P+ YIETYK+YT QGSRVLALA+K LPDM VS+AR + RD
Sbjct: 601 YLAFVKGAPETIQERLVDVPAQYIETYKRYTRQGSRVLALAYKRLPDMMVSEARDMDRDA 660
Query: 659 VENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPV 718
VE+ LTFAGFAVFNCPIR DSA +L ELKNSS DL MITGDQALTAC+VA QVHIV+ PV
Sbjct: 661 VESDLTFAGFAVFNCPIRPDSAPVLLELKNSSHDLVMITGDQALTACHVAGQVHIVSNPV 720
Query: 719 LILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIP 778
LIL +G Y+WVSPDE E I YSEKE+E L + HDLCIGGD EMLQ TSAVLRVIP
Sbjct: 721 LILGRSGSGNEYKWVSPDEKEIIPYSEKEIETLAETHDLCIGGDSIEMLQATSAVLRVIP 780
Query: 779 YVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPP 833
+VKVFARVAP+QKELILTTFKAVGR TLMCGDGTNDVGALKQAHVGVALLN P
Sbjct: 781 FVKVFARVAPQQKELILTTFKAVGRGTLMCGDGTNDVGALKQAHVGVALLNNKLP 835
|
Involved in transport of cations. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: - |
| >sp|Q9HD20|AT131_HUMAN Probable cation-transporting ATPase 13A1 OS=Homo sapiens GN=ATP13A1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/826 (45%), Positives = 517/826 (62%), Gaps = 35/826 (4%)
Query: 28 VWPFA-ILYSGWLIAIVPS--------IDFGDAAI-VLGGLVAFHILVWLFTAWSVDFKC 77
V PFA +LY WL A + +AA+ VL + H L L WSV C
Sbjct: 67 VLPFAGLLYPAWLGAAAAGCWGWGSSWVQIPEAALLVLATICLAHALTVLSGHWSVHAHC 126
Query: 78 FAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSSTPVDEDEICFDFRKQHFI 137
+ D A K+ P GS E+V L + V + F+F+K +
Sbjct: 127 ALTCTPEYDPSKATFVKVVPTPNNGSTELVALH--RNEGEDGLEV----LSFEFQKIKYS 180
Query: 138 Y-SREKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKE 196
Y + EK F + +P F YY G +++I A +K+G N E P F +L KE
Sbjct: 181 YDALEKKQFLPVAFPVGNAFSYYQSNRGFQEDSEIRAAEKKFGSNKAEMVVPDFSELFKE 240
Query: 197 NCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRVDNQT 256
PFFVFQVFCVGLWCLDEYWYYS+FTL ML FE+++ + +++ ++EIR++
Sbjct: 241 RATAPFFVFQVFCVGLWCLDEYWYYSVFTLSMLVAFEASLVQQQMRNMSEIRKMGNKPHM 300
Query: 257 IMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGES 316
I V+R KW +A ++VPGD+VSIGRS ++ VP D+L+L G IV+EA+LTGES
Sbjct: 301 IQVYRSRKWRPIASDEIVPGDIVSIGRSP----QENLVPCDVLLLRGRCIVDEAMLTGES 356
Query: 317 TPQWKVSIMGRETGEKLSARRD-KSHVLFGGTKILQHTPDK--TFPLKTPDGGCLAVVLR 373
PQ K I L + D + HV+FGGTK++QH P + T LK D GC+A VLR
Sbjct: 357 VPQMKEPIEDLSPDRVLDLQADSRLHVIFGGTKVVQHIPPQKATTGLKPVDSGCVAYVLR 416
Query: 374 TGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYK 433
TGF TSQGKL+RTILF +RVTAN+ E+ +FILFL+VFA+ AA YV +G +DP+R++YK
Sbjct: 417 TGFNTSQGKLLRTILFGVKRVTANNLETFIFILFLLVFAIAAAAYVWIEGTKDPSRNRYK 476
Query: 434 LFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTG 493
LFL C+LI+TSV+PPELP+ELS+AVNTSLIALA+ ++CTEPFRIPFAGKV++CCFDKTG
Sbjct: 477 LFLECTLILTSVVPPELPIELSLAVNTSLIALAKLYMYCTEPFRIPFAGKVEVCCFDKTG 536
Query: 494 TLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDN-KLVGDPLEKAALK 552
TLTSD + RGV GL + + ++ +PV T LASCH+L+ +D+ LVGDPLEKA L
Sbjct: 537 TLTSDSLVVRGVAGLRDGKEVTPVSSIPVETHRALASCHSLMQLDDGTLVGDPLEKAMLT 596
Query: 553 GIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEE------FFAFVKGA 606
+DW+ DEK P+ ++I QR HFAS LKRMSV+ ++ + A VKGA
Sbjct: 597 AVDWTLTKDEKVFPRSIKTQGLKIHQRFHFASALKRMSVLASYEKLGSTDLCYIAAVKGA 656
Query: 607 PETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFA 666
PET+ + P Y + + + +G+RVLAL +K L +T AR + R+ +E L F
Sbjct: 657 PETLHSMFSQCPPDYHHIHTEISREGARVLALGYKELGHLTHQQAREVKREALECSLKFV 716
Query: 667 GFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKP--VLILCPV 724
GF V +CP++ DS ++ E++N+S + MITGD LTAC+VA ++H + K +++ P
Sbjct: 717 GFIVVSCPLKADSKAVIREIQNASHRVVMITGDNPLTACHVAQELHFIEKAHTLILQPPS 776
Query: 725 KNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQT--SAVLRVIPYVKV 782
+ G+ EW S D + + + + L + LC+ GD LQ T +LR+IP+V+V
Sbjct: 777 EKGRQCEWRSIDGSIVLPLARGSPKALALEYALCLTGDGLAHLQATDPQQLLRLIPHVQV 836
Query: 783 FARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALL 828
FARVAP+QKE ++T+ K +G +TLMCGDGTNDVGALK A VGVALL
Sbjct: 837 FARVAPKQKEFVITSLKELGYVTLMCGDGTNDVGALKHADVGVALL 882
|
Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
| >sp|Q9EPE9|AT131_MOUSE Probable cation-transporting ATPase 13A1 OS=Mus musculus GN=Atp13a1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/827 (45%), Positives = 515/827 (62%), Gaps = 37/827 (4%)
Query: 28 VWPFA-ILYSGWLIAIVPS--------IDFGDAAIV-LGGLVAFHILVWLFTAWSVDFKC 77
V PFA +LY WL A +AA++ L + H L L WSV C
Sbjct: 64 VLPFAGLLYPAWLGAAASGCWGWGSSWTQIPEAALLALATICLAHALTVLSGHWSVHAHC 123
Query: 78 FAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSSTPVDEDEI-CFDFRKQHF 136
+ D + K+ P GS E+V L K D E+ F+F+K +
Sbjct: 124 ALTCTPEYDPNKVTFVKVVPTPNNGSTELVALHRDKGE-------DGLEVLSFEFQKIKY 176
Query: 137 IY-SREKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMK 195
Y + EK F + +P F YY G +++I A +K+G N E P F +L K
Sbjct: 177 SYDALEKKQFLPVAFPVGNAFSYYQSNRGFQEDSEIRAAEKKFGSNKAEMVVPDFSELFK 236
Query: 196 ENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRVDNQ 255
E PFFVFQVFCVGLWCLDEYWYYS+FTL ML FE+++ + +++ ++EIR++
Sbjct: 237 ERATAPFFVFQVFCVGLWCLDEYWYYSVFTLSMLVAFEASLVQQQMRNMSEIRKMGNKPH 296
Query: 256 TIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGE 315
I V+R KW +A D+VPGD+VSIGRS ++ VP D+L+L G IV+EA+LTGE
Sbjct: 297 MIQVYRSRKWRPVASDDIVPGDIVSIGRSP----QENLVPCDVLLLRGRCIVDEAMLTGE 352
Query: 316 STPQWKVSIMGRETGEKLSARRD-KSHVLFGGTKILQHTPDK--TFPLKTPDGGCLAVVL 372
S PQ K I L + D + HV+FGGTK++QH P + T LK D GC+A VL
Sbjct: 353 SVPQMKEPIEDLSPDRVLDLQADARLHVIFGGTKVVQHIPPQKATSGLKPVDNGCVAFVL 412
Query: 373 RTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKY 432
RTGF TSQG+L+RTILF +RVTAN+ E+ +FILFL+VFA+ AA YV +G +DP+R++Y
Sbjct: 413 RTGFNTSQGRLLRTILFGVKRVTANNLETFIFILFLLVFAIAAAAYVWVEGTKDPSRNRY 472
Query: 433 KLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKT 492
KLFL C+LI+TSV+PPELP+ELS+AVNTSLIALA+ ++CTEPFRIPFAGKV++CCFDKT
Sbjct: 473 KLFLECTLILTSVVPPELPIELSLAVNTSLIALAKLYMYCTEPFRIPFAGKVEVCCFDKT 532
Query: 493 GTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDN-KLVGDPLEKAAL 551
GTLTSD + RGV GL + + ++ +P+ T LASCH+L+ +D+ LVGDPLEKA L
Sbjct: 533 GTLTSDSLVVRGVAGLRDGKEVTPVSSIPIETHRALASCHSLMQLDDGTLVGDPLEKAML 592
Query: 552 KGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEE------FFAFVKG 605
+DW+ DEK P+ ++I QR HFAS LKRMSV+ ++ + A VKG
Sbjct: 593 TAVDWTLTKDEKVFPRSIKTQGLKIHQRFHFASALKRMSVLASYEKLGSTDLCYIAAVKG 652
Query: 606 APETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTF 665
APET+ + P Y + + + +G+RVLAL +K L +T AR + R+ +E L F
Sbjct: 653 APETLHSMFSQCPPDYHHIHTEISREGARVLALGYKELGHLTHQQAREIKREALECSLKF 712
Query: 666 AGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKP--VLILCP 723
GF V +CP++ DS ++ E++N+S + MITGD LTAC+VA ++H + K +++ P
Sbjct: 713 VGFIVVSCPLKADSKAVIREIQNASHRVVMITGDNPLTACHVAQELHFIDKAHTLILHPP 772
Query: 724 VKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQT--SAVLRVIPYVK 781
+ G+ EW S D + + + + L H LC+ GD LQ +L +IP+V+
Sbjct: 773 SEKGQPCEWRSIDSSIVLPLTLGSPKALALEHALCLTGDGLAHLQAVDPQQLLCLIPHVQ 832
Query: 782 VFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALL 828
VFARVAP+QKE ++T+ K +G +TLMCGDGTNDVGALK A VGVALL
Sbjct: 833 VFARVAPKQKEFVITSLKELGYVTLMCGDGTNDVGALKHADVGVALL 879
|
Mus musculus (taxid: 10090) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
| >sp|P39986|ATC6_YEAST Probable cation-transporting ATPase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SPF1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 625 bits (1612), Expect = e-178, Method: Compositional matrix adjust.
Identities = 369/852 (43%), Positives = 506/852 (59%), Gaps = 49/852 (5%)
Query: 6 VGGKVVDRVDLLRKKHWVWRLDVWPFAILYSGWLIAIVPSIDFGDAA-----IVLGGLVA 60
V +V LL K + + V PF LY+ + D + LG LV+
Sbjct: 7 VSSPIVRDSTLLVPKSLIAKPYVLPFFPLYATFAQLYFQQYDRYIKGPEWTFVYLGTLVS 66
Query: 61 FHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSST 120
+ILV L AW+V K +YS +++ A I GS +V +Q ++ T
Sbjct: 67 LNILVMLMPAWNVKIKAKFNYSTTKNVNEATHILIYTTPNNGSDGIVEIQRVTEAGSLQT 126
Query: 121 PVDEDEICFDFRKQHFIYSREKGTFCKLPYPTKET--FGYYLKCTGHSTEAKIAVATEKW 178
F F+K+ F++ + F + E+ G + KC GHS + + +
Sbjct: 127 -------FFQFQKKRFLWHENEQVFSSPKFLVDESPKIGDFQKCKGHSGD--LTHLKRLY 177
Query: 179 GRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAK 238
G N F+ P PTF +L KE+ + P FVFQVFCV LW LDE+WYYSLF LFM+ E+
Sbjct: 178 GENSFDIPIPTFMELFKEHAVAPLFVFQVFCVALWLLDEFWYYSLFNLFMIISMEAAAVF 237
Query: 239 SRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADM 298
RL L E R + + TI V R KWV L +L+P D+VSI R T E+ ++P D+
Sbjct: 238 QRLTALKEFRTMGIKPYTINVFRNKKWVALQTNELLPMDLVSITR----TAEESAIPCDL 293
Query: 299 LILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARR-DKSHVLFGGTKILQHTP--D 355
++L GSAIVNEA+L+GESTP K SI R + + L DK VL GGTK LQ TP
Sbjct: 294 ILLDGSAIVNEAMLSGESTPLLKESIKLRPSEDNLQLDGVDKIAVLHGGTKALQVTPPEH 353
Query: 356 KTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIA 415
K+ PDGG LA+V +TGFETSQG L+R +++S ERV+ ++ E+ +FILFL++FAVIA
Sbjct: 354 KSDIPPPPDGGALAIVTKTGFETSQGSLVRVMIYSAERVSVDNKEALMFILFLLIFAVIA 413
Query: 416 AGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEP 475
+ YV +G + R + KL L C LIITSV+PPELPMEL++AVN+SL ALA+ ++CTEP
Sbjct: 414 SWYVWVEGTK-MGRIQSKLILDCILIITSVVPPELPMELTMAVNSSLAALAKFYVYCTEP 472
Query: 476 FRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELED-----DMTKVPVRTQEILAS 530
FRIPFAG++D+CCFDKTGTLT +D+ F G+ G+S A+ E+ + P T ++ +
Sbjct: 473 FRIPFAGRIDVCCFDKTGTLTGEDLVFEGLAGIS-ADSENIRHLYSAAEAPESTILVIGA 531
Query: 531 CHALV-FVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRM 589
HALV D +VGDP+EKA LK + W+ + K R G + I++R F+S LKR
Sbjct: 532 AHALVKLEDGDIVGDPMEKATLKAVGWAV--ERKNSNYREGTGKLDIIRRFQFSSALKRS 589
Query: 590 SVVVRVQEEFFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVS 649
+ + + FA VKGAPETI++RL+D+P +Y E YK +T GSRVLALA KSLP M+ S
Sbjct: 590 ASIASHNDALFAAVKGAPETIRERLSDIPKNYDEIYKSFTRSGSRVLALASKSLPKMSQS 649
Query: 650 DARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVAS 709
L+RD+VE+ LTF GF +F+CP+++D+ + + L SS MITGD LTA +VA
Sbjct: 650 KIDDLNRDDVESELTFNGFLIFHCPLKDDAIETIKMLNESSHRSIMITGDNPLTAVHVAK 709
Query: 710 QVHIVTKPVLILCPVKNGK----------VYEWVS-PDETEKIQYSEKEVEGLTDAHDLC 758
+V IV LIL + GK V E VS P + K + + L D +D+
Sbjct: 710 EVGIVFGETLILD--RAGKSDDNQLLFRDVEETVSIPFDPSKDTFDHSK---LFDRYDIA 764
Query: 759 IGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGAL 818
+ G L+ S + ++ + V+ARV+P QKE +L T K +G TLMCGDGTNDVGAL
Sbjct: 765 VTGYALNALEGHSQLRDLLRHTWVYARVSPSQKEFLLNTLKDMGYQTLMCGDGTNDVGAL 824
Query: 819 KQAHVGVALLNA 830
KQAHVG+ALLN
Sbjct: 825 KQAHVGIALLNG 836
|
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
| >sp|P90747|YE56_CAEEL Probable cation-transporting ATPase C10C6.6 OS=Caenorhabditis elegans GN=C10C6.6 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 623 bits (1607), Expect = e-177, Method: Compositional matrix adjust.
Identities = 363/832 (43%), Positives = 507/832 (60%), Gaps = 40/832 (4%)
Query: 25 RLDVWPFAILYSGWLIAIVPSIDFGD--AAIVLGGLVAFHIL--VWLFTAWSVDFKCFAH 80
L V PF I+ + W + + + +LG F IL V LF W + +CF
Sbjct: 21 HLYVPPFTIITAIWTYVWLNIFGYEEYYELGMLGYAAIFVILALVLLFCHWMMPVRCFLM 80
Query: 81 YSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSSTPVDEDEICFDFRKQHFIYSR 140
SK D+ +A + P + G E+V L + +T + ++ F+F++ H+ +
Sbjct: 81 CSKQEDVRIASHVCVIPTQNNGWPELVKL-------MRTTRDKQTKLWFEFQRVHYTWDE 133
Query: 141 EKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCME 200
E F T + ++ K G E + A G N E P F ++ E
Sbjct: 134 ESREFQTKTLDTAKPMVFFQKSHGFEVEEHVKDAKYLLGDNKTEMIVPQFLEMFIERATA 193
Query: 201 PFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRVDNQTIMVH 260
PFFVFQVFCVGLWCL++ WYYSLFTLFML FE+T+ K ++K ++EIR + I V
Sbjct: 194 PFFVFQVFCVGLWCLEDMWYYSLFTLFMLMTFEATLVKQQMKNMSEIRNMGNKTYMINVL 253
Query: 261 RCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQW 320
R KW K+ +LV GD+VSIGR + E++ VP D+L+L G IV+E++LTGES PQ
Sbjct: 254 RGKKWQKIKIEELVAGDIVSIGRGA----EEECVPCDLLLLRGPCIVDESMLTGESVPQM 309
Query: 321 KVSIMGRETGEKLSARRD-KSHVLFGGTKILQHT-PDKTFP--LKTPDGGCLAVVLRTGF 376
K I E + D + HV+FGGTKI+QHT P K +K+PDG C+ V+RTGF
Sbjct: 310 KEPIEDVEKDKIFDIETDSRLHVIFGGTKIVQHTAPGKAAEGMVKSPDGNCICYVIRTGF 369
Query: 377 ETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFL 436
TSQGKL+RTI+F ++ TAN+ E+ FILFL++FA+ AA Y+ KG D TRSKYKLFL
Sbjct: 370 NTSQGKLLRTIMFGVKKATANNLETFCFILFLLIFAIAAAAYLWIKGSVDETRSKYKLFL 429
Query: 437 SCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLT 496
C+LI+TSVIPPELP+ELS+AVN+SL+AL + GIFCTEPFRIPFAGKVD+CCFDKTGTLT
Sbjct: 430 ECTLILTSVIPPELPIELSLAVNSSLMALQKLGIFCTEPFRIPFAGKVDICCFDKTGTLT 489
Query: 497 SDDMEFRGVVGLSNAE--LEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGI 554
+D++ G V L+N + + + +P + ++LASCH+LV + LVGDPLEKA L
Sbjct: 490 TDNLVVEG-VALNNQKEGMIRNAEDLPHESLQVLASCHSLVRFEEDLVGDPLEKACLSWC 548
Query: 555 DWSYKSDEKAMPKR---GGGNAVQIVQRHHFASHLKRMSVVVRVQE------EFFAFVKG 605
W+ + MP + G + ++I R+HF+S +KRM+VV Q F VKG
Sbjct: 549 GWNLTKGDAVMPPKTAAKGISGIKIFHRYHFSSAMKRMTVVAGYQSPGTSDTTFIVAVKG 608
Query: 606 APETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTF 665
APE +++ DLPS Y ETY + T QGSRVLA+ + L + V + R R+ EN L F
Sbjct: 609 APEVLRNMYADLPSDYDETYTRLTRQGSRVLAMGIRKLGETRVGELRDKKRENFENDLAF 668
Query: 666 AGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK--PVLILCP 723
AGF V +CP++ D+ ++ E+ +SS +AMITGD LTAC+V+ + K P L+L
Sbjct: 669 AGFVVISCPLKSDTKTMIREIMDSSHVVAMITGDNPLTACHVSKVLKFTKKSLPTLVLDE 728
Query: 724 VKNGKVYEWVSPDETEKIQY-----SEKEVEGLTDAHDLCIGGDCFEML--QQTSAVLRV 776
+G + W S D T ++ ++ E + ++H+ C+ G F L + + + +
Sbjct: 729 PADGVDWMWKSVDGTIELPLKPETKNKMERKAFFNSHEFCLTGSAFHHLVHNEHTFLREL 788
Query: 777 IPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALL 828
I +VKVFAR+AP+QKE I+ K++G++TLMCGDGTNDVGALK A+VGVALL
Sbjct: 789 ILHVKVFARMAPKQKERIINELKSLGKVTLMCGDGTNDVGALKHANVGVALL 840
|
Caenorhabditis elegans (taxid: 6239) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
| >sp|O14072|ATC4_SCHPO Cation-transporting ATPase 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cta4 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 621 bits (1602), Expect = e-177, Method: Compositional matrix adjust.
Identities = 357/834 (42%), Positives = 490/834 (58%), Gaps = 41/834 (4%)
Query: 24 WRLDVWPFAILYSGWLIAIVPSIDFGDAAIVLGGLV--AFHILVWLFTAWSVDFKCFAHY 81
+ L VWPFA+ ++ + + + + L + H L WL W+ C
Sbjct: 25 FHLYVWPFALFVYPYIGYVYQNKLYSEEVRYLTYIAVGTIHALFWLAGEWNTKVYCLMTC 84
Query: 82 SKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSSTPVDEDEICFDFRKQHFIYSRE 141
K + + A +TP K S V P+ K S + + F F+++ FIY E
Sbjct: 85 RKTDKVEQATHILVTPSKIGESSSVEPIT--KLVLPDSQTI---QYSFSFQRKRFIYEPE 139
Query: 142 KGTFCKLPYPTKE--TFGYYLKCTGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCM 199
KG F + +P E T G K TG T + + ++G+N F+ P PTF L KE+ +
Sbjct: 140 KGCFANITFPMDEPSTIGTLKKSTGL-TNIQSEIFLYRYGKNCFDIPIPTFGTLFKEHAV 198
Query: 200 EPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRVDNQTIMV 259
PFFVFQ+FC LWCLD+YWY+SLF++FM+ E ++ R +TLTE R + + I V
Sbjct: 199 APFFVFQIFCCVLWCLDDYWYFSLFSMFMIIALECSVVWQRQRTLTEFRTMSIKPYEIQV 258
Query: 260 HRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQ 319
+R W ++ DL+P DVVS+ + ED +P D+L+L GS +VNEA+L+GESTP
Sbjct: 259 YRNKHWFPISTEDLLPNDVVSVLHNK----EDSGLPCDLLLLSGSCVVNEAMLSGESTPL 314
Query: 320 WKVSIMGRETGEKLSARR-DKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFET 378
K SI R + DK+ VLFGGT++LQ T LKTPD G A+VLRTGFET
Sbjct: 315 VKESIELRPEEAVIDVDELDKNAVLFGGTRVLQVTQSPFCKLKTPDNGVPAIVLRTGFET 374
Query: 379 SQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSC 438
SQG L+RT++FS+E+VTAN+ ES FILFL+VFA+ A+GYV G + RS+YKL L C
Sbjct: 375 SQGSLVRTMVFSSEKVTANNRESLYFILFLLVFAIAASGYVWHVGSKT-ERSRYKLMLDC 433
Query: 439 SLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSD 498
+IITSV+P ELPMELS+AVN SL AL++ I+CTEPFRIP +G +D+CCFDKTGTLT +
Sbjct: 434 VMIITSVVPSELPMELSMAVNASLGALSKYYIYCTEPFRIPLSGHLDICCFDKTGTLTEE 493
Query: 499 DMEFRGVVGLSNAELEDDMTKVPVRTQEIL--ASCHALVFVDN-----KLVGDPLEKAAL 551
M +G+ G++ + IL A+ H LV ++ K+VGDP+EKA +
Sbjct: 494 HMVVQGIAGVNRKDPYSLEKLSDASNDAILAIATAHTLVLLEQEGETPKVVGDPMEKATV 553
Query: 552 KGIDWSYKSDEKAMPKRGG---GNAVQIVQRHHFASHLKRMSVVVRVQE-----EFFAFV 603
+ + WS + G VQI++ F+S LKR S V V+ + F V
Sbjct: 554 ENLGWSIEKKNFVSAPEGSVFYKGKVQIIRNFQFSSALKRQSSVSNVRVSGGSFKTFVSV 613
Query: 604 KGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFK----SLPDMTVSDARSLHRDEV 659
KGAPE I L ++P Y + YK Y +GSRVLAL +K +P+ VSD L R+ +
Sbjct: 614 KGAPEVIATMLREVPKDYEKIYKDYGRKGSRVLALGYKYFKNYIPENQVSD---LSRESI 670
Query: 660 ENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVL 719
E+ L FAGF +F P++ED+ + + L NSS MITGD LTA YVA QV IV KP L
Sbjct: 671 ESDLVFAGFLIFTSPLKEDARQTVQMLNNSSHRCMMITGDNPLTAVYVAEQVGIVEKPTL 730
Query: 720 IL-CPVKNGKVYEWVSPDETEKIQYS-EKEVEG-LTDAHDLCIGGDCFEMLQQTSAVLRV 776
+L +N K+ EW S D+T + + K +E L + +DLCI G + ++ +
Sbjct: 731 VLDIKHENEKILEWKSTDDTINLPMNPHKSLEASLYEKYDLCITGRALSQIINPDVIMSI 790
Query: 777 IPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNA 830
+ V+ARV+P QKE +++T K G +TLMCGDGTNDVGALKQAHVGVALLNA
Sbjct: 791 FTHAWVYARVSPSQKEFMISTLKHNGYITLMCGDGTNDVGALKQAHVGVALLNA 844
|
Has a role in regulating cation homeostasis. Involved in controlling nuclear calcium ion levels. Required for cytokinesis and stabilizing microtubules. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
| >sp|O74431|ATC9_SCHPO Probable cation-transporting ATPase C1672.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1672.11c PE=3 SV=1 | Back alignment and function description |
|---|
Score = 308 bits (788), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 223/744 (29%), Positives = 362/744 (48%), Gaps = 109/744 (14%)
Query: 178 WGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFM-LFMFESTM 236
+G N+ + + +L+ + + PF++FQVF + LW +D Y+YY++ L + + ++
Sbjct: 310 FGENLIDLELKSVSQLLIDEVLHPFYIFQVFSIILWSMDSYYYYAICILIISVVSILGSL 369
Query: 237 AKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPA 296
++R KTL +R + + V+R G W ++ TDLV GDV I E PA
Sbjct: 370 IETR-KTLRRMREMSRFTCPVRVYRDGFWTSISSTDLVIGDVFEISDP-----ELTIFPA 423
Query: 297 DMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDK-----SHVLFGGTKILQ 351
D L+L G IVNE++LTGES P K+ + E S ++ H LF GTKI+Q
Sbjct: 424 DALLLSGDCIVNESMLTGESIPVSKIPATDQSMKELFSFSKNIPASLCKHFLFSGTKIIQ 483
Query: 352 HTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVF 411
K F + +G LA+V+RTGF T++G L+R+++F + +S FI + +
Sbjct: 484 VR--KPFVNEKEEGASLAMVVRTGFNTTKGALVRSMIFPKPTNFSFYRDSFRFITAMFII 541
Query: 412 AVIAAGY----VLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALAR 467
A+I + +L G+ T + + +IT V+PP LP L+I ++ L +
Sbjct: 542 ALIGFVFSSINLLTLGVPIAT-----IIIRALDLITIVVPPALPATLTIGTTFAISRLRK 596
Query: 468 RGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELED-----------D 516
+GIFC P R+ +GK+D+ FDKTGTLT D ++ GV + +EL D D
Sbjct: 597 QGIFCISPQRVNVSGKLDLISFDKTGTLTEDGLDIMGVSVIEGSELGDLRSNSGNLCSKD 656
Query: 517 M--TKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAV 574
+ P +A+CH L +VD +LVGDPL+ K WSY S+E + K+
Sbjct: 657 LLSNDSPSNLLYTMATCHMLRYVDGELVGDPLDIKMFKFTHWSY-SEENFLNKKMSSEQA 715
Query: 575 Q----------------------------------IVQRHHFASHLKRMSVVVRVQ--EE 598
+ IV+ F S L+RM+V+V+ ++
Sbjct: 716 EDAAYVRTQQLIPPTVSPPWNSPSNNYTESDLELGIVRTFEFVSQLRRMAVIVKHGKFKK 775
Query: 599 FFAFVKGAPETIQD--RLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHR 656
A+VKGAPE + + P++Y E YTH G RV+A A K L + T + A+ + R
Sbjct: 776 MDAYVKGAPEIMPSICKPESFPANYQEVLDYYTHNGFRVIACASKQLENCTWAKAQRMKR 835
Query: 657 DEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK 716
++VE L F GF VF ++ +A ++ EL ++ M TGD LT+ V + ++ +
Sbjct: 836 EQVECDLDFCGFIVFENKLKSTTATVIRELNDARIRTVMCTGDNVLTSICVGKRCGMLPE 895
Query: 717 PVLILCP--------------------VKNGKVYEWVSPDETE-KIQYSEK-----EVEG 750
+ P ++N +++ + P + +++ E+
Sbjct: 896 DGYVFLPRFDEESESADEASRQLVWQAIENNEIF--LDPHTLRPNVDFADHEPVSIELAR 953
Query: 751 LTDAHDLCIGGDCFEMLQQTSAVLRVIPYV----KVFARVAPEQKELILTTFKAVGRMTL 806
L D H + + GD F L A L V ++ ++FAR++P +K +++ F+ +
Sbjct: 954 LKDFH-IALTGDVFRWLVDY-APLNVFHHILLKAQIFARMSPSEKNELVSCFQNLNYCVG 1011
Query: 807 MCGDGTNDVGALKQAHVGVALLNA 830
CGDG ND GALK A VG++L A
Sbjct: 1012 FCGDGANDCGALKAADVGISLSEA 1035
|
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
| >sp|Q12697|YPK9_YEAST Vacuolar cation-transporting ATPase YPK9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPK9 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 295 bits (755), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 217/754 (28%), Positives = 359/754 (47%), Gaps = 121/754 (16%)
Query: 178 WGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYS--LFTLFMLFMFEST 235
+G+N T +++ + PF+VFQVF + LW +DEY+YY+ +F + +L +F+S
Sbjct: 474 FGKNQINLRMKTTSEILFNEVLHPFYVFQVFSIILWGIDEYYYYAACIFLISVLSIFDSL 533
Query: 236 MAKSRL-KTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSV 294
+ ++ + L E+ D + V R W ++ ++LVPGD+ + + +
Sbjct: 534 NEQKKVSRNLAEMSHFHCD---VRVLRDKFWTTISSSELVPGDIYEVSDPNITI-----L 585
Query: 295 PADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHV--------LFGG 346
P D ++L IVNE++LTGES P K ET +L + + L+ G
Sbjct: 586 PCDSILLSSDCIVNESMLTGESVPVSKFP-ATEETMYQLCDDFQSTQISSFVSKSFLYNG 644
Query: 347 TKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFIL 406
T I++ + P +T LA+V+RTGF T++G L+R+++F +S +I
Sbjct: 645 TNIIRA---RIAPGQT---AALAMVVRTGFSTTKGSLVRSMVFPKPTGFKFYRDSFKYIG 698
Query: 407 FLVVFAV----IAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSL 462
F+ + A+ ++ +K G++ T + L IIT V+PP LP L+I N +L
Sbjct: 699 FMSLIAIFGFCVSCVQFIKLGLDKKT-----MILRALDIITIVVPPALPATLTIGTNFAL 753
Query: 463 IALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDM--------EFRGVVGLSNAELE 514
L +GIFC P R+ +GK+D+ CFDKTGTLT D + E GV G EL
Sbjct: 754 SRLKEKGIFCISPTRLNISGKIDVMCFDKTGTLTEDGLDVLGVQISEPNGVRGQKFGELL 813
Query: 515 DDMTKV-----------PVRTQE-----ILASCHALVFVDNKLVGDPLEKAALKGIDWSY 558
D+ +V P+ + L +CH+L VD L+GDPL+ + WS+
Sbjct: 814 SDIRQVFPKFSLNDCSSPLDFKSRNFFMSLLTCHSLRSVDGNLLGDPLDFKMFQFTGWSF 873
Query: 559 KSD-------------------------------------EKAMPKRGGGNAVQIVQRHH 581
+ D E N + +V+
Sbjct: 874 EEDFQKRAFHSLYEGRHEDDVFPENSEIIPAVVHPDSNNRENTFTDNDPHNFLGVVRSFE 933
Query: 582 FASHLKRMSVVVRVQEE--FFAFVKGAPETIQD--RLTDLPSSYIETYKKYTHQGSRVLA 637
F S L+RMSV+V+ + +++F KGAPE I + + LP+ + E + YTH G RV+A
Sbjct: 934 FLSELRRMSVIVKTNNDDVYWSFTKGAPEVISEICNKSTLPADFEEVLRCYTHNGYRVIA 993
Query: 638 LAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMIT 697
A K+LP T ++ + R+EVE+ L F GF +F +++++++ L L++++ M T
Sbjct: 994 CAGKTLPKRTWLYSQKVSREEVESNLEFLGFIIFQNKLKKETSETLKSLQDANIRTIMCT 1053
Query: 698 GDQALTACYVASQVHI-----VTKPVLILCPVKNGKVYEWVSPDETEKI---------QY 743
GD LTA V + + V P + P+ V W +E +KI +
Sbjct: 1054 GDNILTAISVGREAGLIQCSRVYVPSINDTPLHGEPVIVWRDVNEPDKILDTKTLKPVKL 1113
Query: 744 SEKEVEGLTDA-HDLCIGGDCFEMLQQTSAVL------RVIPYVKVFARVAPEQKELILT 796
VE L + + L + GD F +L + + ++ ++AR++P++K ++
Sbjct: 1114 GNNSVESLRECNYTLAVSGDVFRLLFRDENEIPEEYLNEILLNSSIYARMSPDEKHELMI 1173
Query: 797 TFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNA 830
+ + CGDG ND GALK A VG++L A
Sbjct: 1174 QLQKLDYTVGFCGDGANDCGALKAADVGISLSEA 1207
|
Vacuolar transporter which plays a role in sequestration of divalent heavy metal ions. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
| >sp|Q5XF89|AT133_MOUSE Probable cation-transporting ATPase 13A3 OS=Mus musculus GN=Atp13a3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 286 bits (731), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 223/746 (29%), Positives = 361/746 (48%), Gaps = 94/746 (12%)
Query: 159 YLKCTGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEY 218
Y K + T+ A +G N P+ KL+ + + PF++FQ+F V LW +DEY
Sbjct: 168 YEKHSAGLTQGMHAYRKLIYGVNEIAVKVPSVFKLLIKEVLNPFYIFQLFSVILWSVDEY 227
Query: 219 WYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLA---GTDLVP 275
+YY+L + M + + S K + + + T+ V C + ++ TDLVP
Sbjct: 228 YYYALAIVIMSVVSIISSLYSIRKQYVMLHDMVATHSTVRVSVCRENEEIEEIFSTDLVP 287
Query: 276 GDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSI---------MG 326
GDV+ I + +P D +++ G+ IVNE++LTGES P K ++ MG
Sbjct: 288 GDVMIIPLNG------TVMPCDAVLINGTCIVNESMLTGESVPVTKTNLPNPSVDVKGMG 341
Query: 327 RETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRT 386
E + S K H LF GT ++Q T T L A+V+RTGF TS+G+L+R+
Sbjct: 342 EE---QYSPETHKRHTLFCGTTVIQ-TRFYTGELVK------AIVVRTGFSTSKGQLVRS 391
Query: 387 ILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVI 446
IL+ ++ LF+L LVV A I Y + + + + + S IIT +
Sbjct: 392 ILYPKPTDFKLYRDAYLFLLCLVVVAGIGFIYTIINSILNEKEVQEIIIKSLD-IITITV 450
Query: 447 PPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVV 506
PP LP ++ + + L + GIFC P RI G++++ CFDKTGTLT D ++ G+
Sbjct: 451 PPALPAAMTAGIVYAQRRLKKVGIFCISPQRINICGQLNLVCFDKTGTLTEDGLDLWGIQ 510
Query: 507 GLSNAEL---EDDM-TKVPVRTQEI--LASCHALVFVDNKLVGDPLEKAALKGIDW---- 556
+ N ED++ +++ V++Q + +A+CH+L ++ L GDPL+ + I W
Sbjct: 511 RVENTRFLLPEDNVCSEMLVKSQFVACMATCHSLTKIEGVLSGDPLDLKMFEAIGWILEE 570
Query: 557 ----SYKSDEKAMPK------------RGGGNA------------VQIVQRHHFASHLKR 588
+ MP GN + IV++ F+S L+R
Sbjct: 571 ATEEETALHNRIMPTVVRPSKQLLPEPTTAGNQEMELFELPAIYEIGIVRQFPFSSALQR 630
Query: 589 MSVVVRV--QEEFFAFVKGAPETIQD--RLTDLPSSYIETYKKYTHQGSRVLALAFKSLP 644
MSVV R ++ A++KGAPE + + +P + + + YT QG RV+ALA + L
Sbjct: 631 MSVVARTLGEKRMDAYMKGAPEVVASLCKPETVPVDFEKVLEDYTKQGFRVIALAHRKLE 690
Query: 645 D-MTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALT 703
+T + + RD +EN + F G + +++++ +L +L ++ M+TGD LT
Sbjct: 691 SKLTWHKVQHISRDAIENNMDFMGLIIMQNKLKQETPAVLEDLHKANIRTVMVTGDNMLT 750
Query: 704 ACYVASQVHIV--TKPVLI--LCPVKNGKV--YEWVSPDETEKIQYS---EKEVEGLTDA 754
A VA ++ V+I P K+GKV W D + S + E + A
Sbjct: 751 AVSVARDCGMILPQDKVIIAEALPPKDGKVAKINWHYTDSLSQCSESSAIDSEAIPIKLA 810
Query: 755 HD-----------LCIGGDCFEMLQQ--TSAVLRVIPYVKVFARVAPEQKELILTTFKAV 801
HD + G F ++ + V +++ + VFAR+AP+QK ++ + V
Sbjct: 811 HDSLEDLEVTRYHFAMNGKSFSVILEHFQDLVPKLMLHGTVFARMAPDQKTQLVEALQNV 870
Query: 802 GRMTLMCGDGTNDVGALKQAHVGVAL 827
MCGDG ND GALK+AH G++L
Sbjct: 871 DYFVGMCGDGANDCGALKRAHGGISL 896
|
Mus musculus (taxid: 10090) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
| >sp|Q9H7F0|AT133_HUMAN Probable cation-transporting ATPase 13A3 OS=Homo sapiens GN=ATP13A3 PE=1 SV=4 | Back alignment and function description |
|---|
Score = 280 bits (716), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 213/724 (29%), Positives = 350/724 (48%), Gaps = 88/724 (12%)
Query: 178 WGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMA 237
+G N P+ KL+ + + PF++FQ+F V LW DEY+YY+L + M + +
Sbjct: 191 YGVNEIAVKVPSVFKLLIKEVLNPFYIFQLFSVILWSTDEYYYYALAIVVMSIVSIVSSL 250
Query: 238 KSRLKTLTEIRRVRVDNQTIMVHRC---GKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSV 294
S K + + + T+ V C + ++ TDLVPGDV+ I + +
Sbjct: 251 YSIRKQYVMLHDMVATHSTVRVSVCRVNEEIEEIFSTDLVPGDVMVIPLNG------TIM 304
Query: 295 PADMLILGGSAIVNEAILTGESTPQWKVSIMG-----RETGEKL-SARRDKSHVLFGGTK 348
P D +++ G+ IVNE++LTGES P K ++ + G++L + K H LF GT
Sbjct: 305 PCDAVLINGTCIVNESMLTGESVPVTKTNLPNPSVDVKGIGDELYNPETHKRHTLFCGTT 364
Query: 349 ILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFL 408
++Q T T L A+V+RTGF TS+G+L+R+IL+ ++ LF+L L
Sbjct: 365 VIQ-TRFYTGELVK------AIVVRTGFSTSKGQLVRSILYPKPTDFKLYRDAYLFLLCL 417
Query: 409 VVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARR 468
V A I Y + + + + + S IIT +PP LP ++ + + L +
Sbjct: 418 VAVAGIGFIYTIINSILNEVQVGVIIIESLD-IITITVPPALPAAMTAGIVYAQRRLKKI 476
Query: 469 GIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAEL----EDDMTKVPVRT 524
GIFC P RI G++++ CFDKTGTLT D ++ G+ + NA E+ ++ V++
Sbjct: 477 GIFCISPQRINICGQLNLVCFDKTGTLTEDGLDLWGIQRVENARFLSPEENVCNEMLVKS 536
Query: 525 QEI--LASCHALVFVDNKLVGDPLEKAALKGIDW--------SYKSDEKAMP-------- 566
Q + +A+CH+L ++ L GDPL+ + I W + MP
Sbjct: 537 QFVACMATCHSLTKIEGVLSGDPLDLKMFEAIGWILEEATEEETALHNRIMPTVVRPPKQ 596
Query: 567 ----KRGGGNA------------VQIVQRHHFASHLKRMSVVVRV--QEEFFAFVKGAPE 608
GN + IV++ F+S L+RMSVV RV + A++KGAPE
Sbjct: 597 LLPESTPAGNQEMELFELPATYEIGIVRQFPFSSALQRMSVVARVLGDRKMDAYMKGAPE 656
Query: 609 TIQD--RLTDLPSSYIETYKKYTHQGSRVLALAFKSLPD-MTVSDARSLHRDEVENGLTF 665
I + +P + + +T QG RV+ALA + L +T +++ RD +EN + F
Sbjct: 657 AIAGLCKPETVPVDFQNVLEDFTKQGFRVIALAHRKLESKLTWHKVQNISRDAIENNMDF 716
Query: 666 AGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILC--- 722
G + +++++ +L +L ++ M+TGD LTA VA ++ ++
Sbjct: 717 MGLIIMQNKLKQETPAVLEDLHKANIRTVMVTGDSMLTAVSVARDCGMILPQDKVIIAEA 776
Query: 723 -PVKNGKV--YEWVSPDETEKIQYS---EKEVEGLTDAHD-----------LCIGGDCFE 765
P K+GKV W D + + + E + HD + G F
Sbjct: 777 LPPKDGKVAKINWHYADSLTQCSHPSAIDPEAIPVKLVHDSLEDLQMTRYHFAMNGKSFS 836
Query: 766 MLQQ--TSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHV 823
++ + V +++ + VFAR+AP+QK ++ + V MCGDG ND GALK+AH
Sbjct: 837 VILEHFQDLVPKLMLHGTVFARMAPDQKTQLIEALQNVDYFVGMCGDGANDCGALKRAHG 896
Query: 824 GVAL 827
G++L
Sbjct: 897 GISL 900
|
Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 853 | ||||||
| 255544367 | 1193 | cation-transporting atpase 13a1, putativ | 0.994 | 0.710 | 0.856 | 0.0 | |
| 224122746 | 1185 | p-type ATPase transporter [Populus trich | 0.990 | 0.713 | 0.848 | 0.0 | |
| 225463226 | 1191 | PREDICTED: probable cation-transporting | 0.994 | 0.712 | 0.846 | 0.0 | |
| 359480896 | 1189 | PREDICTED: probable cation-transporting | 0.991 | 0.711 | 0.848 | 0.0 | |
| 224145681 | 1188 | p-type ATPase transporter [Populus trich | 0.988 | 0.709 | 0.840 | 0.0 | |
| 449442871 | 1192 | PREDICTED: LOW QUALITY PROTEIN: probable | 0.996 | 0.713 | 0.828 | 0.0 | |
| 356508902 | 1180 | PREDICTED: probable cation-transporting | 0.992 | 0.717 | 0.829 | 0.0 | |
| 356516439 | 1188 | PREDICTED: probable cation-transporting | 0.992 | 0.712 | 0.826 | 0.0 | |
| 15237798 | 1179 | putative cation-transporting ATPase [Ara | 0.976 | 0.706 | 0.811 | 0.0 | |
| 297812517 | 1179 | predicted protein [Arabidopsis lyrata su | 0.974 | 0.704 | 0.809 | 0.0 |
| >gi|255544367|ref|XP_002513245.1| cation-transporting atpase 13a1, putative [Ricinus communis] gi|223547619|gb|EEF49113.1| cation-transporting atpase 13a1, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1524 bits (3945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 727/849 (85%), Positives = 779/849 (91%), Gaps = 1/849 (0%)
Query: 1 MLSFHVGGKVVDRVDLLRKKHWVWRLDVWPFAILYSGWLIAIVPSIDFGDAAIVLGGLVA 60
ML F VGGKVV+RVDLLRKKHW WRLDVWPFAILY W+ A+VPSIDFGDA IVLG LVA
Sbjct: 1 MLRFDVGGKVVERVDLLRKKHWGWRLDVWPFAILYLIWVTAVVPSIDFGDATIVLGALVA 60
Query: 61 FHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSST 120
HIL WLFTAWSVDFKCF YSK +DIH+ADACKITP KF GSKEVVPL KQ SST
Sbjct: 61 LHILSWLFTAWSVDFKCFVQYSKGSDIHVADACKITPAKFSGSKEVVPLHLRKQLESSST 120
Query: 121 PVDEDEICFDFRKQHFIYSREKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGR 180
P +EI FDFRKQ FIYS+EK TFCKLPYPTKETFGYYLKC+GH +E+K+A ATEKWGR
Sbjct: 121 PGHVEEIYFDFRKQRFIYSKEKNTFCKLPYPTKETFGYYLKCSGHGSESKVAAATEKWGR 180
Query: 181 NVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 240
N FEYPQPTFQKLMKE+CMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR
Sbjct: 181 NAFEYPQPTFQKLMKEHCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 240
Query: 241 LKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLI 300
LKTL+E+RRVRVD QT+MVHRCGKWVKL+GTDL+PGDVVSIGRSSGQ GEDKSVPADML+
Sbjct: 241 LKTLSELRRVRVDGQTLMVHRCGKWVKLSGTDLLPGDVVSIGRSSGQNGEDKSVPADMLL 300
Query: 301 LGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPL 360
+ GSAIVNEAILTGESTPQWKVSIMGR EKLSA+RDK+HVLFGGTK+LQHTPDKTFPL
Sbjct: 301 IAGSAIVNEAILTGESTPQWKVSIMGRGNEEKLSAKRDKTHVLFGGTKVLQHTPDKTFPL 360
Query: 361 KTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVL 420
+TPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVL
Sbjct: 361 RTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVL 420
Query: 421 KKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 480
KKG+EDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF
Sbjct: 421 KKGLEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 480
Query: 481 AGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA-ELEDDMTKVPVRTQEILASCHALVFVDN 539
AGKVD+CCFDKTGTLTSDDMEF GVVGL++ +LE DM+KVPVRT E+LASCHALVFVDN
Sbjct: 481 AGKVDICCFDKTGTLTSDDMEFCGVVGLTDGMDLESDMSKVPVRTVEVLASCHALVFVDN 540
Query: 540 KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEF 599
KLVGDPLEKAALKGIDWSYKSDEKAMPK+GGGNAVQIVQRHHFASHLKRM+VVVR+ EEF
Sbjct: 541 KLVGDPLEKAALKGIDWSYKSDEKAMPKKGGGNAVQIVQRHHFASHLKRMAVVVRINEEF 600
Query: 600 FAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEV 659
FAFVKGAPETIQDRLTDLP SYI TYKK+T QGSRVLALA+KSLPDMTVS+ARS+ RD V
Sbjct: 601 FAFVKGAPETIQDRLTDLPQSYIATYKKFTRQGSRVLALAYKSLPDMTVSEARSMDRDVV 660
Query: 660 ENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVL 719
ENGL FAGFAVFNCPIR DSA ILSELKNSS DL MITGDQALTAC+VASQVHI+TKP L
Sbjct: 661 ENGLIFAGFAVFNCPIRADSATILSELKNSSHDLVMITGDQALTACHVASQVHIITKPAL 720
Query: 720 ILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPY 779
IL P ++ + YEW+SPDE+E I+YS+KEV L + HDLCIGGDC ML+Q SA L+VIP+
Sbjct: 721 ILGPARDTEGYEWISPDESEIIRYSDKEVGALAETHDLCIGGDCIAMLEQGSATLQVIPH 780
Query: 780 VKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNS 839
VKVFARVAPEQKELI+TTFK VGRMTLMCGDGTNDVGALKQAHVGVALLNAVPP QSGNS
Sbjct: 781 VKVFARVAPEQKELIMTTFKMVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPAQSGNS 840
Query: 840 SSEASKDEN 848
S+E SKD N
Sbjct: 841 SAEISKDGN 849
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224122746|ref|XP_002330462.1| p-type ATPase transporter [Populus trichocarpa] gi|222871874|gb|EEF09005.1| p-type ATPase transporter [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1504 bits (3894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 719/847 (84%), Positives = 774/847 (91%), Gaps = 2/847 (0%)
Query: 4 FHVGGKVVDRVDLLRKKHWVWRLDVWPFAILYSGWLIAIVPSIDFGDAAIVLGGLVAFHI 63
F+VGGKVV+RVDL+RKK W WRLD++PFAILY+ W++ +VPSID DA IVLGGLVA H+
Sbjct: 1 FNVGGKVVERVDLIRKKKWPWRLDIFPFAILYAIWMVTVVPSIDIVDAFIVLGGLVAIHV 60
Query: 64 LVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSSTPVD 123
LV LFTAWSVDFKCF YSK+NDI AD CK+TP KF GSKEVVPL +QSA SS+P D
Sbjct: 61 LVLLFTAWSVDFKCFVQYSKVNDIRAADTCKVTPAKFSGSKEVVPLYIRQQSATSSSPGD 120
Query: 124 EDEICFDFRKQHFIYSREKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGRNVF 183
+EI FDFRKQ FIYS+E TFCKLPYPTKETFG+YLK TGH +EAK+A ATEKWGRNVF
Sbjct: 121 GEEIYFDFRKQWFIYSKENETFCKLPYPTKETFGHYLKSTGHGSEAKVAAATEKWGRNVF 180
Query: 184 EYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKT 243
EYPQPTFQKL+KE CMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKT
Sbjct: 181 EYPQPTFQKLLKEQCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKT 240
Query: 244 LTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGG 303
L+E+RRVRVD QTIMVHRCGKWVKL+GTDL+PGDVVSIGRSSGQ GEDKSVPADML+L G
Sbjct: 241 LSELRRVRVDTQTIMVHRCGKWVKLSGTDLLPGDVVSIGRSSGQHGEDKSVPADMLLLAG 300
Query: 304 SAIVNEAILTGESTPQWKV-SIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKT 362
SAI+NEAILTGESTPQWKV SI GR EKLSA+RDK+HVLFGGTKILQHTPDK FPL+
Sbjct: 301 SAILNEAILTGESTPQWKVVSITGRGMEEKLSAKRDKNHVLFGGTKILQHTPDKNFPLRA 360
Query: 363 PDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKK 422
PDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKK
Sbjct: 361 PDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKK 420
Query: 423 GMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAG 482
G+EDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAG
Sbjct: 421 GLEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAG 480
Query: 483 KVDMCCFDKTGTLTSDDMEFRGVVGLS-NAELEDDMTKVPVRTQEILASCHALVFVDNKL 541
KVD+CCFDKTGTLTSDDMEFRGVVGL+ +A+LE DMTKVPVRT EILASCHALVFVDNKL
Sbjct: 481 KVDICCFDKTGTLTSDDMEFRGVVGLTESADLESDMTKVPVRTAEILASCHALVFVDNKL 540
Query: 542 VGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFA 601
VGDPLEKAAL GIDWSYKSDEKAMPK+GGGNAVQIVQRHHFASHLKRM+VVVR QEEF A
Sbjct: 541 VGDPLEKAALTGIDWSYKSDEKAMPKKGGGNAVQIVQRHHFASHLKRMAVVVRTQEEFLA 600
Query: 602 FVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVEN 661
FVKGAPETIQDRL DLP SY++TYKKYT QGSRVLALAFK LPDMTVS+ARSL RD VE
Sbjct: 601 FVKGAPETIQDRLIDLPPSYVDTYKKYTRQGSRVLALAFKYLPDMTVSEARSLDRDVVET 660
Query: 662 GLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLIL 721
GL FAGFAVFNCPIREDSA +LSELKNSS DL MITGDQALTAC+VASQVHI++KP LIL
Sbjct: 661 GLAFAGFAVFNCPIREDSASVLSELKNSSHDLVMITGDQALTACHVASQVHIISKPALIL 720
Query: 722 CPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVK 781
P ++G+ YEW+SPDE EKI Y +K E L++ HDLCIGGDC +MLQQ+SAVL+VIPYVK
Sbjct: 721 GPSRSGEGYEWISPDEMEKISYGDKGAEELSETHDLCIGGDCIDMLQQSSAVLQVIPYVK 780
Query: 782 VFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSS 841
VFARVAPEQKELILTTFK VGR+TLMCGDGTNDVGALKQAHVGVALLNAVPPT+SGNSSS
Sbjct: 781 VFARVAPEQKELILTTFKTVGRVTLMCGDGTNDVGALKQAHVGVALLNAVPPTKSGNSSS 840
Query: 842 EASKDEN 848
E KD N
Sbjct: 841 ETPKDGN 847
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225463226|ref|XP_002272397.1| PREDICTED: probable cation-transporting ATPase-like isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1500 bits (3883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 719/849 (84%), Positives = 774/849 (91%), Gaps = 1/849 (0%)
Query: 1 MLSFHVGGKVVDRVDLLRKKHWVWRLDVWPFAILYSGWLIAIVPSIDFGDAAIVLGGLVA 60
ML FHVGGKVV+ VDLLRK+HW WRLDVWPFAILY+ WL+ +VPSID DA IV GGLV
Sbjct: 1 MLRFHVGGKVVEDVDLLRKRHWPWRLDVWPFAILYTIWLVTVVPSIDISDAIIVFGGLVV 60
Query: 61 FHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSST 120
HILVWLFTAWSV+F+CF YSK+N I ADACKITP KF GSKE+VPL F Q SS+
Sbjct: 61 LHILVWLFTAWSVEFRCFVQYSKVNSIQQADACKITPAKFSGSKEIVPLHFRMQMTDSSS 120
Query: 121 PVDEDEICFDFRKQHFIYSREKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGR 180
D +EI FDFRKQ FIYS+EK TF KL YP+KE+FGYY K TGH +EAK+ ATEKWGR
Sbjct: 121 SSDVEEIYFDFRKQCFIYSKEKETFFKLSYPSKESFGYYHKSTGHGSEAKVVAATEKWGR 180
Query: 181 NVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 240
NVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR
Sbjct: 181 NVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 240
Query: 241 LKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLI 300
LKTLTE+RRVRVDNQTIMVHRCGKWVKL+GT+L+PGDVVSIGRSSGQ GEDK+VPADMLI
Sbjct: 241 LKTLTELRRVRVDNQTIMVHRCGKWVKLSGTELLPGDVVSIGRSSGQNGEDKTVPADMLI 300
Query: 301 LGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPL 360
L GSAIVNEAILTGESTPQWKVSIMGR EKLS +RDK+HVLFGGTKILQHTPDKT L
Sbjct: 301 LAGSAIVNEAILTGESTPQWKVSIMGRGNEEKLSVKRDKNHVLFGGTKILQHTPDKTVHL 360
Query: 361 KTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVL 420
KTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLV+FAVIAAGYVL
Sbjct: 361 KTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVIFAVIAAGYVL 420
Query: 421 KKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 480
KKG+EDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF
Sbjct: 421 KKGLEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 480
Query: 481 AGKVDMCCFDKTGTLTSDDMEFRGVVGLSN-AELEDDMTKVPVRTQEILASCHALVFVDN 539
AGKVD+CCFDKTGTLTSDDMEFRGV GL++ A+LE DM+KVP RT EILASCHALVFVDN
Sbjct: 481 AGKVDICCFDKTGTLTSDDMEFRGVTGLTDAADLESDMSKVPARTVEILASCHALVFVDN 540
Query: 540 KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEF 599
KLVGDPLEKAALKGIDWSYKSDEKA+PK+G G AVQIV+RHHFAS+LKRMSVVVRVQEEF
Sbjct: 541 KLVGDPLEKAALKGIDWSYKSDEKAVPKKGSGQAVQIVKRHHFASYLKRMSVVVRVQEEF 600
Query: 600 FAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEV 659
AFVKGAPETIQ+RL DLP SY+ETYKKYT QGSRVLALAFKSLP+MTVS+AR++ RD V
Sbjct: 601 LAFVKGAPETIQERLVDLPPSYVETYKKYTRQGSRVLALAFKSLPEMTVSEARNMDRDVV 660
Query: 660 ENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVL 719
E+GLTFAGFAVFNCPIR DSA +LSELK SS DLAMITGDQALTAC+VA QVHI++KP L
Sbjct: 661 ESGLTFAGFAVFNCPIRADSATVLSELKGSSHDLAMITGDQALTACHVAGQVHIISKPTL 720
Query: 720 ILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPY 779
IL P +N + YEW+SPDETE I+YS KEVE L++ HDLCIGGDCFEMLQQTSAVL+VIP+
Sbjct: 721 ILGPARNSEGYEWISPDETEIIRYSAKEVEALSETHDLCIGGDCFEMLQQTSAVLQVIPF 780
Query: 780 VKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNS 839
VKVFARVAPEQKELILTTFK VGRMTLMCGDGTNDVGALKQAHVGVALLNA+PPTQ+G S
Sbjct: 781 VKVFARVAPEQKELILTTFKTVGRMTLMCGDGTNDVGALKQAHVGVALLNAMPPTQTGGS 840
Query: 840 SSEASKDEN 848
SSEASKDE
Sbjct: 841 SSEASKDET 849
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359480896|ref|XP_003632541.1| PREDICTED: probable cation-transporting ATPase-like isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1499 bits (3882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 720/849 (84%), Positives = 775/849 (91%), Gaps = 3/849 (0%)
Query: 1 MLSFHVGGKVVDRVDLLRKKHWVWRLDVWPFAILYSGWLIAIVPSIDFGDAAIVLGGLVA 60
ML FHVGGKVV+ VDLLRK+HW WRLDVWPFAILY+ WL+ +VPSID DA IV GGLV
Sbjct: 1 MLRFHVGGKVVEDVDLLRKRHWPWRLDVWPFAILYTIWLVTVVPSIDISDAIIVFGGLVV 60
Query: 61 FHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSST 120
HILVWLFTAWSV+F+CF YSK+N I ADACKITP KF GSKE+VPL F K VSS+
Sbjct: 61 LHILVWLFTAWSVEFRCFVQYSKVNSIQQADACKITPAKFSGSKEIVPLHFRK--LVSSS 118
Query: 121 PVDEDEICFDFRKQHFIYSREKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGR 180
D +EI FDFRKQ FIYS+EK TF KL YP+KE+FGYY K TGH +EAK+ ATEKWGR
Sbjct: 119 SSDVEEIYFDFRKQCFIYSKEKETFFKLSYPSKESFGYYHKSTGHGSEAKVVAATEKWGR 178
Query: 181 NVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 240
NVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR
Sbjct: 179 NVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 238
Query: 241 LKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLI 300
LKTLTE+RRVRVDNQTIMVHRCGKWVKL+GT+L+PGDVVSIGRSSGQ GEDK+VPADMLI
Sbjct: 239 LKTLTELRRVRVDNQTIMVHRCGKWVKLSGTELLPGDVVSIGRSSGQNGEDKTVPADMLI 298
Query: 301 LGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPL 360
L GSAIVNEAILTGESTPQWKVSIMGR EKLS +RDK+HVLFGGTKILQHTPDKT L
Sbjct: 299 LAGSAIVNEAILTGESTPQWKVSIMGRGNEEKLSVKRDKNHVLFGGTKILQHTPDKTVHL 358
Query: 361 KTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVL 420
KTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLV+FAVIAAGYVL
Sbjct: 359 KTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVIFAVIAAGYVL 418
Query: 421 KKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 480
KKG+EDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF
Sbjct: 419 KKGLEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 478
Query: 481 AGKVDMCCFDKTGTLTSDDMEFRGVVGLSN-AELEDDMTKVPVRTQEILASCHALVFVDN 539
AGKVD+CCFDKTGTLTSDDMEFRGV GL++ A+LE DM+KVP RT EILASCHALVFVDN
Sbjct: 479 AGKVDICCFDKTGTLTSDDMEFRGVTGLTDAADLESDMSKVPARTVEILASCHALVFVDN 538
Query: 540 KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEF 599
KLVGDPLEKAALKGIDWSYKSDEKA+PK+G G AVQIV+RHHFAS+LKRMSVVVRVQEEF
Sbjct: 539 KLVGDPLEKAALKGIDWSYKSDEKAVPKKGSGQAVQIVKRHHFASYLKRMSVVVRVQEEF 598
Query: 600 FAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEV 659
AFVKGAPETIQ+RL DLP SY+ETYKKYT QGSRVLALAFKSLP+MTVS+AR++ RD V
Sbjct: 599 LAFVKGAPETIQERLVDLPPSYVETYKKYTRQGSRVLALAFKSLPEMTVSEARNMDRDVV 658
Query: 660 ENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVL 719
E+GLTFAGFAVFNCPIR DSA +LSELK SS DLAMITGDQALTAC+VA QVHI++KP L
Sbjct: 659 ESGLTFAGFAVFNCPIRADSATVLSELKGSSHDLAMITGDQALTACHVAGQVHIISKPTL 718
Query: 720 ILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPY 779
IL P +N + YEW+SPDETE I+YS KEVE L++ HDLCIGGDCFEMLQQTSAVL+VIP+
Sbjct: 719 ILGPARNSEGYEWISPDETEIIRYSAKEVEALSETHDLCIGGDCFEMLQQTSAVLQVIPF 778
Query: 780 VKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNS 839
VKVFARVAPEQKELILTTFK VGRMTLMCGDGTNDVGALKQAHVGVALLNA+PPTQ+G S
Sbjct: 779 VKVFARVAPEQKELILTTFKTVGRMTLMCGDGTNDVGALKQAHVGVALLNAMPPTQTGGS 838
Query: 840 SSEASKDEN 848
SSEASKDE
Sbjct: 839 SSEASKDET 847
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224145681|ref|XP_002325729.1| p-type ATPase transporter [Populus trichocarpa] gi|222862604|gb|EEF00111.1| p-type ATPase transporter [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1473 bits (3814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 714/849 (84%), Positives = 771/849 (90%), Gaps = 6/849 (0%)
Query: 3 SFHVGGKVVDRVDLLRKKHWVWRLDVWPFAILYSGWLIAIVPSIDFGDAAIVLGGLVAFH 62
+F+VGGKVV+RVDL+RKK W WR D+ PFAILY+ W++ IVPSID DA IVLGGLV+ H
Sbjct: 1 TFNVGGKVVERVDLIRKKKWPWRFDILPFAILYAVWMVTIVPSIDIVDALIVLGGLVSIH 60
Query: 63 ILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSSTPV 122
+L LFTAWSVDFKCF YSK+NDI+ AD+CK+TP KF GSKEVVPL +QSA SST
Sbjct: 61 VLALLFTAWSVDFKCFVQYSKVNDIYAADSCKVTPAKFSGSKEVVPLHIRQQSAASSTSG 120
Query: 123 DEDEICFDFRKQHFIYSREKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGRNV 182
D +E FDFRKQ FIYS+E GTF KLPYPTKETFGYYLK TGH +EAK+A A EKWGRNV
Sbjct: 121 DVEEFYFDFRKQCFIYSKENGTFRKLPYPTKETFGYYLKSTGHGSEAKVAAAAEKWGRNV 180
Query: 183 FEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLK 242
FEYPQPTFQKL+KE CMEPFFVFQVFCVGLWCLDE+WYYSLFTLFMLFMFESTMAKSRLK
Sbjct: 181 FEYPQPTFQKLLKEQCMEPFFVFQVFCVGLWCLDEFWYYSLFTLFMLFMFESTMAKSRLK 240
Query: 243 TLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILG 302
TL+E+RRVRVD QT+MVHRCGKWVKL+GTDL+PGDVVSIGRSSGQ GEDKSVPAD+L+L
Sbjct: 241 TLSELRRVRVDTQTVMVHRCGKWVKLSGTDLLPGDVVSIGRSSGQNGEDKSVPADLLLLA 300
Query: 303 GSAIVNEAILTGESTPQWK-VSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLK 361
GSAIVNEAILTGESTPQWK VSIMGR T EKLSA+RDK+HVLFGGTKILQHTPDKTFPL+
Sbjct: 301 GSAIVNEAILTGESTPQWKVVSIMGRGTEEKLSAKRDKNHVLFGGTKILQHTPDKTFPLR 360
Query: 362 TPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLK 421
PDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFL+VFA+IAAGYVLK
Sbjct: 361 APDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLLVFAIIAAGYVLK 420
Query: 422 K---GMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRI 478
K G+EDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRI
Sbjct: 421 KASDGLEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRI 480
Query: 479 PFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA-ELEDDMTKVPVRTQEILASCHALVFV 537
PFAGKVD+CCFDKTGTLTSDDMEF GVVG + + +LE DMTKVP T EILASCHALVFV
Sbjct: 481 PFAGKVDICCFDKTGTLTSDDMEFCGVVGQTESTDLETDMTKVPACTAEILASCHALVFV 540
Query: 538 DNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQE 597
DNKLVGDPLEKAALKGIDWSYKSDEKAMPK+GGGNAVQIVQRHHFASHLKRM+VVVR+QE
Sbjct: 541 DNKLVGDPLEKAALKGIDWSYKSDEKAMPKKGGGNAVQIVQRHHFASHLKRMAVVVRIQE 600
Query: 598 EFFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRD 657
EF AFVKGAPETIQDRL DLPSSY++TYKKYT QGSRVLALAFK+LPDMTV +ARSL RD
Sbjct: 601 EFLAFVKGAPETIQDRLVDLPSSYVDTYKKYTRQGSRVLALAFKNLPDMTVGEARSLDRD 660
Query: 658 EVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKP 717
VE GLTFAGFAVFNCPIR DSA +LSELKNSS DL MITGDQALTAC+VASQVHI++KP
Sbjct: 661 VVETGLTFAGFAVFNCPIRADSAAVLSELKNSSHDLVMITGDQALTACHVASQVHIISKP 720
Query: 718 VLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVI 777
LILCP +G+ YEW+SPDE EKI Y +KE E L++ HDLCIGGDC EMLQQ+SAVLRVI
Sbjct: 721 ALILCP-SSGQGYEWISPDEMEKISYGDKEAEELSETHDLCIGGDCIEMLQQSSAVLRVI 779
Query: 778 PYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSG 837
PYVKVFARVAPEQKELILTTFK VGR+TLMCGDGTNDVGALKQAHVGVALLNAVPPTQSG
Sbjct: 780 PYVKVFARVAPEQKELILTTFKTVGRITLMCGDGTNDVGALKQAHVGVALLNAVPPTQSG 839
Query: 838 NSSSEASKD 846
N SSE KD
Sbjct: 840 NKSSETPKD 848
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449442871|ref|XP_004139204.1| PREDICTED: LOW QUALITY PROTEIN: probable cation-transporting ATPase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1461 bits (3782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 705/851 (82%), Positives = 764/851 (89%), Gaps = 1/851 (0%)
Query: 1 MLSFHVGGKVVDRVDLLRKKHWVWRLDVWPFAILYSGWLIAIVPSIDFGDAAIVLGGLVA 60
ML FHVGGKVV+RVDLLRKKHW WR D+WPFAILY+ WL +VPSIDFGDA IVLGGL A
Sbjct: 1 MLRFHVGGKVVERVDLLRKKHWAWRFDLWPFAILYAAWLAVVVPSIDFGDAFIVLGGLAA 60
Query: 61 FHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSST 120
H+LV LFTAWSVDFKCF YS++NDI+ AD CKI P KF GSKE+V L F K A S++
Sbjct: 61 LHVLVLLFTAWSVDFKCFVQYSQVNDIYFADTCKIVPAKFSGSKEIVSLHFRKLLAGSTS 120
Query: 121 PVDEDEICFDFRKQHFIYSREKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGR 180
VD +EI FDFRKQ FIYS+EK FCKLPYPTKETFGYYLK TG+ +E K+ A EKWGR
Sbjct: 121 AVDLEEIYFDFRKQRFIYSKEKENFCKLPYPTKETFGYYLKNTGYGSEPKVVAAVEKWGR 180
Query: 181 NVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 240
N+FEYPQPTFQKLMKE CMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR
Sbjct: 181 NIFEYPQPTFQKLMKEQCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 240
Query: 241 LKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLI 300
LKTL+E+RRVRVD QT+MVHRCGKWVKL GT+L+PGDVVSIGR SGQ+G+DKSVPADMLI
Sbjct: 241 LKTLSELRRVRVDTQTLMVHRCGKWVKLPGTELLPGDVVSIGRDSGQSGDDKSVPADMLI 300
Query: 301 LGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPL 360
L GSAI NEAILTGESTPQWKVSI GR EKLSA+RDKSHVLFGGTKILQHTPDKTFPL
Sbjct: 301 LAGSAIANEAILTGESTPQWKVSITGRGIDEKLSAKRDKSHVLFGGTKILQHTPDKTFPL 360
Query: 361 KTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVL 420
+TPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFI+FLVVFAVIAAGYVL
Sbjct: 361 RTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFIMFLVVFAVIAAGYVL 420
Query: 421 KKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 480
KG+EDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF
Sbjct: 421 VKGLEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 480
Query: 481 AGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA-ELEDDMTKVPVRTQEILASCHALVFVDN 539
AGKVD+CCFDKTGTLTSDDMEFRGVVGLS+ ELE DMT V +RT EILASCHALVFVDN
Sbjct: 481 AGKVDICCFDKTGTLTSDDMEFRGVVGLSDKEELETDMTSVSLRTVEILASCHALVFVDN 540
Query: 540 KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEF 599
KLVGDPLEKAALKG+DW YKSDEKA+P++G GNAVQIVQRHHFAS+LKRM+VVVR+QEEF
Sbjct: 541 KLVGDPLEKAALKGVDWIYKSDEKAVPRKGSGNAVQIVQRHHFASYLKRMAVVVRLQEEF 600
Query: 600 FAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEV 659
FAFVKGAPETIQ+RLTD+PS Y+ETYKKYT QGSRVLALA+KSLPDMTVS R L RD V
Sbjct: 601 FAFVKGAPETIQERLTDVPSFYVETYKKYTRQGSRVLALAYKSLPDMTVSXIRGLDRDLV 660
Query: 660 ENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVL 719
E+ LTFAGFAVFNCPIR DSA ILSELK SS DL MITGDQALTAC+VASQVHI +K +L
Sbjct: 661 ESDLTFAGFAVFNCPIRADSATILSELKGSSHDLVMITGDQALTACHVASQVHITSKQIL 720
Query: 720 ILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPY 779
IL +K + Y+W+SPDE++ + YSEKEV L++ +DLCIGGDC MLQ+TS VL VIPY
Sbjct: 721 ILNSMKGTEEYKWLSPDESQTVPYSEKEVGTLSETYDLCIGGDCIAMLQRTSTVLDVIPY 780
Query: 780 VKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNS 839
VKVFARVAPEQKELILTTFK VGRMTLMCGDGTNDVGALKQAHVG+ALLNAVPP QSGNS
Sbjct: 781 VKVFARVAPEQKELILTTFKTVGRMTLMCGDGTNDVGALKQAHVGIALLNAVPPPQSGNS 840
Query: 840 SSEASKDENTK 850
SSEASKDE +
Sbjct: 841 SSEASKDEAVR 851
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356508902|ref|XP_003523192.1| PREDICTED: probable cation-transporting ATPase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1454 bits (3763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 703/848 (82%), Positives = 768/848 (90%), Gaps = 1/848 (0%)
Query: 1 MLSFHVGGKVVDRVDLLRKKHWVWRLDVWPFAILYSGWLIAIVPSIDFGDAAIVLGGLVA 60
M SFHVGGKVVD+VDLLRKK W WRLDVWPFAILY WL I+PS+DF DAAIV G LV+
Sbjct: 1 MSSFHVGGKVVDQVDLLRKKRWPWRLDVWPFAILYGAWLSTILPSLDFVDAAIVFGALVS 60
Query: 61 FHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSST 120
HILV+LFT WSVDFKCFAHYSK+ +I AD+CKITP KF GSKEVVPL K SA SS+
Sbjct: 61 LHILVFLFTGWSVDFKCFAHYSKVKNIDQADSCKITPAKFSGSKEVVPLHSRKSSAASSS 120
Query: 121 PVDEDEICFDFRKQHFIYSREKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGR 180
VD +E FDFRKQ F++S+EKGTFCKL YPTKETFGYYLKC+GH +EAK+ ATEKWGR
Sbjct: 121 AVDLEENYFDFRKQCFVHSKEKGTFCKLSYPTKETFGYYLKCSGHGSEAKVLAATEKWGR 180
Query: 181 NVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 240
NVF+YPQPTFQKLMKE+CMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR
Sbjct: 181 NVFDYPQPTFQKLMKEHCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 240
Query: 241 LKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLI 300
LKTLTE+RRVRVD+Q +MVHRCGKWVKL+GTDL+PGDVVSIGRSSGQ GE+KSVPADML+
Sbjct: 241 LKTLTELRRVRVDSQILMVHRCGKWVKLSGTDLLPGDVVSIGRSSGQNGEEKSVPADMLL 300
Query: 301 LGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPL 360
L GS IVNEAILTGESTPQWK+SI GR E LSA+RDK+HVLFGGTKILQHTPDK+FPL
Sbjct: 301 LAGSVIVNEAILTGESTPQWKISIAGRAMEETLSAKRDKNHVLFGGTKILQHTPDKSFPL 360
Query: 361 KTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVL 420
KTPDGGCLAV+LRTGFETSQGKLMRTILFSTERVTANSWESG FILFLVVFA+IAAGYVL
Sbjct: 361 KTPDGGCLAVILRTGFETSQGKLMRTILFSTERVTANSWESGFFILFLVVFALIAAGYVL 420
Query: 421 KKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 480
KG+EDPTRSKYKL LSCSLI+TSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF
Sbjct: 421 VKGLEDPTRSKYKLILSCSLIVTSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 480
Query: 481 AGKVDMCCFDKTGTLTSDDMEFRGVVGLS-NAELEDDMTKVPVRTQEILASCHALVFVDN 539
AGKVD+CCFDKTGTLTSDDMEF GVVGL+ +LE D +KVPVRT EILASCHALVFV+N
Sbjct: 481 AGKVDICCFDKTGTLTSDDMEFSGVVGLNGTTDLESDTSKVPVRTVEILASCHALVFVEN 540
Query: 540 KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEF 599
KLVGDPLEKAAL+GIDWSYKSD+KA+PK+G G VQIV R+HFASHLKRM+VVVR+QEEF
Sbjct: 541 KLVGDPLEKAALRGIDWSYKSDDKAVPKKGTGQPVQIVHRYHFASHLKRMAVVVRIQEEF 600
Query: 600 FAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEV 659
FAFVKGAPE IQDRL D+P SY+ETYKKYT QGSRVLALA+KSL DMTVS+ARSL RD V
Sbjct: 601 FAFVKGAPEVIQDRLIDIPPSYVETYKKYTRQGSRVLALAYKSLDDMTVSEARSLDRDIV 660
Query: 660 ENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVL 719
E+ LTFAGF VFNCPIR DSA +LSELK SS DL MITGDQALTAC+VASQVHI++KP L
Sbjct: 661 ESRLTFAGFVVFNCPIRSDSATVLSELKESSHDLVMITGDQALTACHVASQVHIISKPTL 720
Query: 720 ILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPY 779
IL P +NG+ Y WVSPDETE I YSEKEVE L++ HDLCIGGDC EMLQQTSA LRVIPY
Sbjct: 721 ILGPTRNGEGYNWVSPDETENIHYSEKEVESLSETHDLCIGGDCIEMLQQTSAHLRVIPY 780
Query: 780 VKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNS 839
VKVFARVAPEQKELI+TTFK VGR+TLMCGDGTNDVGALKQAHVG+ALLNA+PPTQSGNS
Sbjct: 781 VKVFARVAPEQKELIMTTFKTVGRLTLMCGDGTNDVGALKQAHVGIALLNALPPTQSGNS 840
Query: 840 SSEASKDE 847
SS++SK+E
Sbjct: 841 SSDSSKEE 848
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356516439|ref|XP_003526902.1| PREDICTED: probable cation-transporting ATPase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1453 bits (3761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 701/848 (82%), Positives = 771/848 (90%), Gaps = 1/848 (0%)
Query: 1 MLSFHVGGKVVDRVDLLRKKHWVWRLDVWPFAILYSGWLIAIVPSIDFGDAAIVLGGLVA 60
M SFHVGGKVVDRVDLLRKK W WRLDVWPFAILY WL AI+PS+DF DAAIV G LV+
Sbjct: 1 MSSFHVGGKVVDRVDLLRKKQWPWRLDVWPFAILYGAWLSAILPSLDFVDAAIVFGALVS 60
Query: 61 FHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSST 120
HILV+LFT WSVDFKCFAHYSK+ +I AD+CKITP KF G+KEVVPL K SA SS+
Sbjct: 61 LHILVFLFTGWSVDFKCFAHYSKVKNIDQADSCKITPAKFSGAKEVVPLHSRKSSAGSSS 120
Query: 121 PVDEDEICFDFRKQHFIYSREKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGR 180
VD +E FDFRKQ F+YS+EKGTFCKL YPTKETFGYYLKC+GH +EAK+ ATEKWGR
Sbjct: 121 AVDLEENYFDFRKQCFVYSKEKGTFCKLSYPTKETFGYYLKCSGHGSEAKVLAATEKWGR 180
Query: 181 NVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 240
NVF+YPQPTFQKLMKE+CMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR
Sbjct: 181 NVFDYPQPTFQKLMKEHCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 240
Query: 241 LKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLI 300
LKTLTE+RRVRVD+Q +MVHRCGKWVKL+GT+L+PGDVVSIGRSSGQ GE+KSVPADML+
Sbjct: 241 LKTLTELRRVRVDSQILMVHRCGKWVKLSGTELLPGDVVSIGRSSGQNGEEKSVPADMLL 300
Query: 301 LGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPL 360
L GS IVNEAILTGESTPQWK+SI GR E LSAR+DK+HVLFGGTKILQHTPDK+FPL
Sbjct: 301 LAGSVIVNEAILTGESTPQWKISIAGRGMEETLSARQDKNHVLFGGTKILQHTPDKSFPL 360
Query: 361 KTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVL 420
KTPDGGCLAV+LRTGFETSQGKLMRTILFSTERVTANSWESG FILFLVVFA+IAAGYVL
Sbjct: 361 KTPDGGCLAVILRTGFETSQGKLMRTILFSTERVTANSWESGFFILFLVVFALIAAGYVL 420
Query: 421 KKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 480
KG+EDPTRSKYKL LSCSLI+TSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF
Sbjct: 421 VKGLEDPTRSKYKLILSCSLIVTSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 480
Query: 481 AGKVDMCCFDKTGTLTSDDMEFRGVVGLS-NAELEDDMTKVPVRTQEILASCHALVFVDN 539
AGKVD+CCFDKTGTLTSDDMEF G+VGL+ +LE D +KVP+RT EILASCHALVFV+N
Sbjct: 481 AGKVDICCFDKTGTLTSDDMEFSGIVGLNGTTDLESDTSKVPLRTVEILASCHALVFVEN 540
Query: 540 KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEF 599
KLVGDPLEKAALKGIDWSYKSD+KA+PK+G G+ VQIV R+HFASHLKRM+VVVR+QEEF
Sbjct: 541 KLVGDPLEKAALKGIDWSYKSDDKAVPKKGNGHPVQIVHRYHFASHLKRMAVVVRIQEEF 600
Query: 600 FAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEV 659
FAFVKGAPE IQDRL D+P SY+ETYKKYT QGSRVLALA+KSL DMTVS+ARSL R V
Sbjct: 601 FAFVKGAPEVIQDRLVDIPPSYVETYKKYTRQGSRVLALAYKSLADMTVSEARSLDRGIV 660
Query: 660 ENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVL 719
E+GLTFAGF VFNCPIR DSA +L+ELK SS DL MITGDQALTAC+VASQVHI++KP L
Sbjct: 661 ESGLTFAGFVVFNCPIRSDSATVLAELKESSHDLVMITGDQALTACHVASQVHIISKPTL 720
Query: 720 ILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPY 779
IL P +NG+ Y W+SPDETE I+YSEKEVE L++ HDLCIGGDC EMLQQTSA LRVIPY
Sbjct: 721 ILGPAQNGEGYNWMSPDETENIRYSEKEVESLSETHDLCIGGDCIEMLQQTSAHLRVIPY 780
Query: 780 VKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNS 839
VKVFARVAPEQKELI+TTFK VGR+TLMCGDGTNDVGALKQAHVG+ALLNA+PPTQSGNS
Sbjct: 781 VKVFARVAPEQKELIMTTFKMVGRLTLMCGDGTNDVGALKQAHVGIALLNALPPTQSGNS 840
Query: 840 SSEASKDE 847
SS++SK+E
Sbjct: 841 SSDSSKEE 848
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15237798|ref|NP_197752.1| putative cation-transporting ATPase [Arabidopsis thaliana] gi|12229714|sp|Q9LT02.1|ATY1_ARATH RecName: Full=Probable cation-transporting ATPase gi|8809697|dbj|BAA97238.1| cation-transporting ATPase [Arabidopsis thaliana] gi|332005809|gb|AED93192.1| putative cation-transporting ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1407 bits (3642), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 678/835 (81%), Positives = 739/835 (88%), Gaps = 2/835 (0%)
Query: 1 MLSFHVGGKVVDRVDLLRKKHWVWRLDVWPFAILYSGWLIAIVPSIDFGDAAIVLGGLVA 60
M SF VGGKVV++VDL RKK VWRLDVWPFAILY+ WL IVPSIDF DA I LGGL A
Sbjct: 1 MSSFRVGGKVVEKVDLCRKKQLVWRLDVWPFAILYTVWLTTIVPSIDFSDACIALGGLSA 60
Query: 61 FHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSST 120
FHILV LFT WSVDFKCF +SK+N I ADACK+TP KF GSKEVVPL F Q S++
Sbjct: 61 FHILVLLFTTWSVDFKCFVQFSKVNSIDQADACKVTPAKFSGSKEVVPLHFRSQMTDSAS 120
Query: 121 PVDEDEICFDFRKQHFIYSREKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGR 180
D +EI FDFRKQ FIYS+E G F KLPYPTKETFG+YLKCTGH TEAKIA ATEKWGR
Sbjct: 121 SGDMEEIFFDFRKQRFIYSKELGAFSKLPYPTKETFGHYLKCTGHGTEAKIATATEKWGR 180
Query: 181 NVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 240
NVF+YPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDE+WYYS+FTLFMLFMFESTMAKSR
Sbjct: 181 NVFDYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEFWYYSVFTLFMLFMFESTMAKSR 240
Query: 241 LKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTG-EDKSVPADML 299
LKTLT++R VRVD+QT+MV+R GKWVKL GTDL+PGDVVSIGR S QTG EDK+VPADML
Sbjct: 241 LKTLTDLRSVRVDSQTVMVYRSGKWVKLLGTDLLPGDVVSIGRPSTQTGGEDKTVPADML 300
Query: 300 ILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFP 359
+L GSAIVNEAILTGESTPQWKV I+G+ + EKLS +R+K+HVLFGGTKILQH+PDK+F
Sbjct: 301 LLVGSAIVNEAILTGESTPQWKVPIVGQRSDEKLSIKRNKNHVLFGGTKILQHSPDKSFS 360
Query: 360 LKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYV 419
LKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYV
Sbjct: 361 LKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYV 420
Query: 420 LKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIP 479
L KG+EDPTRSKYKL L CSLIITSVIPPELPMELSIAVNTSL+AL RRGIFCTEPFRIP
Sbjct: 421 LVKGLEDPTRSKYKLLLGCSLIITSVIPPELPMELSIAVNTSLLALVRRGIFCTEPFRIP 480
Query: 480 FAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAE-LEDDMTKVPVRTQEILASCHALVFVD 538
FAGKVD+CCFDKTGTLTSDDMEFRGV GLSN E E DM+KVPVRT EILASCHALVFV+
Sbjct: 481 FAGKVDLCCFDKTGTLTSDDMEFRGVGGLSNCEEAETDMSKVPVRTLEILASCHALVFVE 540
Query: 539 NKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEE 598
NKLVGDPLEKAALKGIDWSYK+DEKA+P+RG GN+VQI+QR+HFASHLKRMSV+VR+QEE
Sbjct: 541 NKLVGDPLEKAALKGIDWSYKADEKALPRRGNGNSVQIMQRYHFASHLKRMSVIVRIQEE 600
Query: 599 FFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDE 658
+ AFVKGAPETIQ+RL D+P+ YIETYK+YT QGSRVLALA+K LPDM VS+AR + RD
Sbjct: 601 YLAFVKGAPETIQERLVDVPAQYIETYKRYTRQGSRVLALAYKRLPDMMVSEARDMDRDA 660
Query: 659 VENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPV 718
VE+ LTFAGFAVFNCPIR DSA +L ELKNSS DL MITGDQALTAC+VA QVHIV+ PV
Sbjct: 661 VESDLTFAGFAVFNCPIRPDSAPVLLELKNSSHDLVMITGDQALTACHVAGQVHIVSNPV 720
Query: 719 LILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIP 778
LIL +G Y+WVSPDE E I YSEKE+E L + HDLCIGGD EMLQ TSAVLRVIP
Sbjct: 721 LILGRSGSGNEYKWVSPDEKEIIPYSEKEIETLAETHDLCIGGDSIEMLQATSAVLRVIP 780
Query: 779 YVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPP 833
+VKVFARVAP+QKELILTTFKAVGR TLMCGDGTNDVGALKQAHVGVALLN P
Sbjct: 781 FVKVFARVAPQQKELILTTFKAVGRGTLMCGDGTNDVGALKQAHVGVALLNNKLP 835
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297812517|ref|XP_002874142.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297319979|gb|EFH50401.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1403 bits (3631), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 674/833 (80%), Positives = 737/833 (88%), Gaps = 2/833 (0%)
Query: 1 MLSFHVGGKVVDRVDLLRKKHWVWRLDVWPFAILYSGWLIAIVPSIDFGDAAIVLGGLVA 60
M SF VGGKVV++VDL RKK VWRLDVWPFAILY+ WL IVPSIDF DA I LG L A
Sbjct: 1 MSSFRVGGKVVEKVDLCRKKQLVWRLDVWPFAILYTVWLTTIVPSIDFTDACIALGALSA 60
Query: 61 FHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSST 120
FHILV LFTAWSVDFKCF +SK+N I ADACK+TP KF GSKEVVPL F Q S+
Sbjct: 61 FHILVLLFTAWSVDFKCFVQFSKVNSIDQADACKVTPAKFSGSKEVVPLHFRSQMTGSAA 120
Query: 121 PVDEDEICFDFRKQHFIYSREKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGR 180
D +EI FDFRKQ FIYS+E G F KLPYPTKETFG+YLKCTGH TEAK+A ATEKWGR
Sbjct: 121 SEDLEEIFFDFRKQRFIYSKELGAFSKLPYPTKETFGHYLKCTGHGTEAKVATATEKWGR 180
Query: 181 NVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 240
NVF+YPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDE+WYYS+FTLFMLFMFESTMAKSR
Sbjct: 181 NVFDYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEFWYYSVFTLFMLFMFESTMAKSR 240
Query: 241 LKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTG-EDKSVPADML 299
LKTLT++RRVRVD+QT+MV+R G+WV+L GTDL+PGDVVSIGR S TG EDK+VPADML
Sbjct: 241 LKTLTDLRRVRVDSQTVMVYRSGRWVRLLGTDLLPGDVVSIGRPSTHTGGEDKTVPADML 300
Query: 300 ILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFP 359
+L GSAIVNEAILTGESTPQWKV I+G+ + EKLS +RDK+HVLFGGTKILQH+PDK+F
Sbjct: 301 LLVGSAIVNEAILTGESTPQWKVPIVGQGSDEKLSIKRDKNHVLFGGTKILQHSPDKSFS 360
Query: 360 LKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYV 419
LKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYV
Sbjct: 361 LKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYV 420
Query: 420 LKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIP 479
L KG+EDPTRSKYKL L CSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIP
Sbjct: 421 LVKGLEDPTRSKYKLLLGCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIP 480
Query: 480 FAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELED-DMTKVPVRTQEILASCHALVFVD 538
FAGKVD+CCFDKTGTLTSDDMEFRGV GLSN+E D DM+KVPVRT EILASCHALVFVD
Sbjct: 481 FAGKVDLCCFDKTGTLTSDDMEFRGVGGLSNSEEADTDMSKVPVRTLEILASCHALVFVD 540
Query: 539 NKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEE 598
NKLVGDPLEKAALKGIDWSYK+DEKA+P+RG GN+VQI+QR+HFASHLKRMSV+VR+QEE
Sbjct: 541 NKLVGDPLEKAALKGIDWSYKADEKALPRRGNGNSVQIMQRYHFASHLKRMSVIVRIQEE 600
Query: 599 FFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDE 658
+ FVKGAPETIQ+RL D+P+ YIETYK+YT QGSRVLALA+K LPDM VS+AR + RD
Sbjct: 601 YLVFVKGAPETIQERLVDVPAQYIETYKRYTRQGSRVLALAYKRLPDMMVSEARDMDRDA 660
Query: 659 VENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPV 718
VE+ LTFAGFAVFNCPIR DSA +L ELKNSS DL MITGDQALTAC+VA QVHIV+ PV
Sbjct: 661 VESDLTFAGFAVFNCPIRPDSAPVLLELKNSSHDLVMITGDQALTACHVAGQVHIVSNPV 720
Query: 719 LILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIP 778
LIL Y+W+SPDE E I YSEK++E L + HDLCIGGD EMLQ TSAVLRVIP
Sbjct: 721 LILGRSGTDNEYKWMSPDEKEIIPYSEKDIETLAETHDLCIGGDSIEMLQATSAVLRVIP 780
Query: 779 YVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAV 831
+VKVFARVAP+QKELILTTFKAVGR TLMCGDGTNDVGALKQAHVGVALLN +
Sbjct: 781 FVKVFARVAPQQKELILTTFKAVGRGTLMCGDGTNDVGALKQAHVGVALLNTI 833
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 853 | ||||||
| TAIR|locus:2171686 | 1179 | PDR2 "phosphate deficiency res | 0.992 | 0.718 | 0.803 | 0.0 | |
| DICTYBASE|DDB_G0293004 | 1298 | ctaA "putative cation-transpor | 0.434 | 0.285 | 0.509 | 6e-186 | |
| ZFIN|ZDB-GENE-040426-2804 | 1242 | atp13a "ATPase type 13A" [Dani | 0.970 | 0.666 | 0.442 | 1.1e-183 | |
| UNIPROTKB|F1PRS5 | 1206 | ATP13A1 "Uncharacterized prote | 0.956 | 0.676 | 0.453 | 1.8e-183 | |
| UNIPROTKB|Q9HD20 | 1204 | ATP13A1 "Probable cation-trans | 0.956 | 0.677 | 0.455 | 2.9e-183 | |
| UNIPROTKB|F1S7C4 | 1204 | ATP13A1 "Uncharacterized prote | 0.956 | 0.677 | 0.455 | 2.9e-183 | |
| RGD|1306033 | 1197 | Atp13a1 "ATPase type 13A1" [Ra | 0.956 | 0.681 | 0.452 | 2.6e-182 | |
| MGI|MGI:2180801 | 1200 | Atp13a1 "ATPase type 13A1" [Mu | 0.956 | 0.68 | 0.452 | 1.4e-181 | |
| UNIPROTKB|F1MYA8 | 1199 | ATP13A1 "Uncharacterized prote | 0.956 | 0.680 | 0.450 | 1.8e-181 | |
| UNIPROTKB|H9L041 | 1192 | ATP13A1 "Uncharacterized prote | 0.939 | 0.671 | 0.442 | 3.9e-179 |
| TAIR|locus:2171686 PDR2 "phosphate deficiency response 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3556 (1256.8 bits), Expect = 0., P = 0.
Identities = 685/853 (80%), Positives = 750/853 (87%)
Query: 1 MLSFHVGGKVVDRVDLLRKKHWVWRLDVWPFAILYSGWLIAIVPSIDFGDAAIVLGGLVA 60
M SF VGGKVV++VDL RKK VWRLDVWPFAILY+ WL IVPSIDF DA I LGGL A
Sbjct: 1 MSSFRVGGKVVEKVDLCRKKQLVWRLDVWPFAILYTVWLTTIVPSIDFSDACIALGGLSA 60
Query: 61 FHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSST 120
FHILV LFT WSVDFKCF +SK+N I ADACK+TP KF GSKEVVPL F Q S++
Sbjct: 61 FHILVLLFTTWSVDFKCFVQFSKVNSIDQADACKVTPAKFSGSKEVVPLHFRSQMTDSAS 120
Query: 121 PVDEDEICFDFRKQHFIYSREKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGR 180
D +EI FDFRKQ FIYS+E G F KLPYPTKETFG+YLKCTGH TEAKIA ATEKWGR
Sbjct: 121 SGDMEEIFFDFRKQRFIYSKELGAFSKLPYPTKETFGHYLKCTGHGTEAKIATATEKWGR 180
Query: 181 NVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 240
NVF+YPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDE+WYYS+FTLFMLFMFESTMAKSR
Sbjct: 181 NVFDYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEFWYYSVFTLFMLFMFESTMAKSR 240
Query: 241 LKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTG-EDKSVPADML 299
LKTLT++R VRVD+QT+MV+R GKWVKL GTDL+PGDVVSIGR S QTG EDK+VPADML
Sbjct: 241 LKTLTDLRSVRVDSQTVMVYRSGKWVKLLGTDLLPGDVVSIGRPSTQTGGEDKTVPADML 300
Query: 300 ILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFP 359
+L GSAIVNEAILTGESTPQWKV I+G+ + EKLS +R+K+HVLFGGTKILQH+PDK+F
Sbjct: 301 LLVGSAIVNEAILTGESTPQWKVPIVGQRSDEKLSIKRNKNHVLFGGTKILQHSPDKSFS 360
Query: 360 LKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYV 419
LKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYV
Sbjct: 361 LKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYV 420
Query: 420 LKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIP 479
L KG+EDPTRSKYKL L CSLIITSVIPPELPMELSIAVNTSL+AL RRGIFCTEPFRIP
Sbjct: 421 LVKGLEDPTRSKYKLLLGCSLIITSVIPPELPMELSIAVNTSLLALVRRGIFCTEPFRIP 480
Query: 480 FAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAE-LEDDMTKVPVRTQEILASCHALVFVD 538
FAGKVD+CCFDKTGTLTSDDMEFRGV GLSN E E DM+KVPVRT EILASCHALVFV+
Sbjct: 481 FAGKVDLCCFDKTGTLTSDDMEFRGVGGLSNCEEAETDMSKVPVRTLEILASCHALVFVE 540
Query: 539 NKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEE 598
NKLVGDPLEKAALKGIDWSYK+DEKA+P+RG GN+VQI+QR+HFASHLKRMSV+VR+QEE
Sbjct: 541 NKLVGDPLEKAALKGIDWSYKADEKALPRRGNGNSVQIMQRYHFASHLKRMSVIVRIQEE 600
Query: 599 FFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDE 658
+ AFVKGAPETIQ+RL D+P+ YIETYK+YT QGSRVLALA+K LPDM VS+AR + RD
Sbjct: 601 YLAFVKGAPETIQERLVDVPAQYIETYKRYTRQGSRVLALAYKRLPDMMVSEARDMDRDA 660
Query: 659 VENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPV 718
VE+ LTFAGFAVFNCPIR DSA +L ELKNSS DL MITGDQALTAC+VA QVHIV+ PV
Sbjct: 661 VESDLTFAGFAVFNCPIRPDSAPVLLELKNSSHDLVMITGDQALTACHVAGQVHIVSNPV 720
Query: 719 LILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIP 778
LIL +G Y+WVSPDE E I YSEKE+E L + HDLCIGGD EMLQ TSAVLRVIP
Sbjct: 721 LILGRSGSGNEYKWVSPDEKEIIPYSEKEIETLAETHDLCIGGDSIEMLQATSAVLRVIP 780
Query: 779 YVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGN 838
+VKVFARVAP+QKELILTTFKAVGR TLMCGDGTNDVGALKQAHVGVALLN P
Sbjct: 781 FVKVFARVAPQQKELILTTFKAVGRGTLMCGDGTNDVGALKQAHVGVALLNNKLPL---- 836
Query: 839 SSSEASKDENTKS 851
S S++SKD+ +KS
Sbjct: 837 SPSDSSKDDKSKS 849
|
|
| DICTYBASE|DDB_G0293004 ctaA "putative cation-transporting ATPase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 1009 (360.2 bits), Expect = 6.0e-186, Sum P(5) = 6.0e-186
Identities = 195/383 (50%), Positives = 270/383 (70%)
Query: 130 DFRKQHFIYSREKGTFCKL----PYPTKETFGYYLKCTGHSTEAKIAVATEKWGRNVFEY 185
+F+K+ +Y+ +K F K+ P ++E + + T+ +I +A K+G N F+
Sbjct: 209 EFQKRKLVYNPDKKQFEKIKFHIPLDSEELLN---QARSYETDEQIELAAMKYGLNRFDI 265
Query: 186 PQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLT 245
P PTF L KE + PFFVFQVFCV LWCL+EY +Y LF+LFML +FE+T+ KSRL L
Sbjct: 266 PIPTFLALYKEQAIAPFFVFQVFCVLLWCLEEYVFYCLFSLFMLLVFEATVVKSRLSNLN 325
Query: 246 EIRRVRVDNQ-TIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGS 304
+R + I V+R +W ++ T+++PGD+VSIGR + + ++P DM++L G
Sbjct: 326 SLRNMSSKPTFPIYVYRLNQWKQINTTEILPGDIVSIGRGASEA--TSTLPCDMILLSGG 383
Query: 305 AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPL--KT 362
+VNEA+LTGESTP K SI R++ + L + +K H+L+GGT I+QHTP + K
Sbjct: 384 CVVNEAMLTGESTPHHKESIKDRKSTKPLDLKNEKIHILYGGTTIVQHTPSEKLARVSKP 443
Query: 363 PDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKK 422
PD GC+A +TGF T+QG+LMRTI FS+ERVTAN+ ES LFILFL+ FA+ A+ Y+ K
Sbjct: 444 PDRGCIAYAYKTGFNTNQGRLMRTIWFSSERVTANNKESFLFILFLLTFAIAASAYLFNK 503
Query: 423 GMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAG 482
G+ + RSKYKL L+C ++ITSV+PPELPMELS+AVN SLI+L + GI+CTEPFRIPFAG
Sbjct: 504 GIRENNRSKYKLLLNCIMVITSVVPPELPMELSLAVNNSLISLIKLGIYCTEPFRIPFAG 563
Query: 483 KVDMCCFDKTGTLTSDDMEFRGV 505
KVD+CCFDKTGTLT+DD+ +G+
Sbjct: 564 KVDVCCFDKTGTLTTDDLVLQGI 586
|
|
| ZFIN|ZDB-GENE-040426-2804 atp13a "ATPase type 13A" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1782 (632.4 bits), Expect = 1.1e-183, P = 1.1e-183
Identities = 381/861 (44%), Positives = 542/861 (62%)
Query: 10 VVDRVDLLRKKHWVWRLDVWPFAILYSGWL---IAIVPSIDFGDAAIV-LGGLVAFHILV 65
+V V L ++ V V+PF ILY L + + ++ +A ++ L L H+L
Sbjct: 86 LVRAVSLHSRRPRVLHGTVFPFLILYPACLYTWFGVYGAAEYVEAGLLALAALGIAHVLT 145
Query: 66 WLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSSTPVDED 125
L WSV C SK +D A K+ P GS E+VPL K D
Sbjct: 146 VLSGYWSVHAHCLLTCSKESDPAKATFAKVIPTPNNGSAELVPLLRDKDE-------DGA 198
Query: 126 EIC-FDFRKQHFIYS-REKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGRNVF 183
EI F+F+K ++Y EK F + +P ++ G+ E ++ A +++G N
Sbjct: 199 EILSFEFQKICYVYDGEEKKQFLPVAFPISFPMSHFQNWRGYQEEVQLRAAEKRYGTNRA 258
Query: 184 EYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKT 243
E P F +L KE PFFVFQVFCVGLWCLDEYWYYS+FTLFML FE+++ + +++
Sbjct: 259 EMVVPDFLELFKERATAPFFVFQVFCVGLWCLDEYWYYSVFTLFMLVAFEASLVQQQMRN 318
Query: 244 LTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGG 303
++EIRR+ I V+R KW ++ +LVPGD+VS+GRS +D VP D+L+L G
Sbjct: 319 MSEIRRMGNKPYMIQVYRNRKWRPISSDELVPGDIVSVGRSP----QDNLVPCDVLLLRG 374
Query: 304 SAIVNEAILTGESTPQWKVSIMGRETGEKLSARRD-KSHVLFGGTKILQHTPD--KTFPL 360
IV+EA+LTGES PQ K I + L + D + H++ GGTK++QH+P + L
Sbjct: 375 RCIVDEAMLTGESVPQMKEPIEDLDPNRILDLQTDSRLHIISGGTKVVQHSPPLRASAGL 434
Query: 361 KTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVL 420
K D GC+A VLRTGF TSQGKL+RTILF +RVTAN+ E+ +FILFL+VFA+ AA YV
Sbjct: 435 KPVDNGCVAYVLRTGFYTSQGKLLRTILFGVKRVTANNLETFIFILFLLVFAIAAAVYVW 494
Query: 421 KKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 480
+G +DP+R+KYKLFL C+LI+TSV+PPELP+ELS+AVNTSLIALA+ +FCTEPFRIPF
Sbjct: 495 VEGTKDPSRNKYKLFLECTLILTSVVPPELPIELSLAVNTSLIALAKLYVFCTEPFRIPF 554
Query: 481 AGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDN- 539
AGKV++CCFDKTGTLTSD + RGV GL + ++++PV T ++A+CH+LV +D+
Sbjct: 555 AGKVEICCFDKTGTLTSDSLVVRGVAGLREGKQVMPVSEIPVDTHRVVATCHSLVTLDDG 614
Query: 540 KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEE- 598
+LVGDPLEKA L DW+ DEK + ++I QR HF S LKRMSV+ +
Sbjct: 615 QLVGDPLEKAMLTAADWTLTKDEKVFARSIKTPGLKIHQRFHFTSALKRMSVLASYERMG 674
Query: 599 -----FFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARS 653
+ + VKGAPET+++ ++ P+SY E +++ + +G+RVLAL +K + ++ R
Sbjct: 675 STELCYISTVKGAPETLRNMFSECPASYDEVHREMSREGARVLALGYKEMGHLSHQQVRE 734
Query: 654 LHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHI 713
+ R+++E L FAGF V +CP++ DS ++ E++ +S + MITGD LTAC+VA ++H
Sbjct: 735 VSREQLECDLRFAGFMVVSCPLKSDSKAVIREIQEASHHVVMITGDNPLTACHVARELHF 794
Query: 714 VTKP-VLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSA 772
+ K LIL + ++WVS D + + V L +DLC+ G+ L+
Sbjct: 795 IQKEHTLILQQSSSQAEWQWVSIDGSVSLPLPPSSVSELIQRYDLCVTGEGLARLKFDPQ 854
Query: 773 VLR-VIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALL-NA 830
+L ++P+V+VFARV+P+QKE ++T+ K +G +TLMCGDGTNDVGALK AH+GVALL NA
Sbjct: 855 LLSALLPHVRVFARVSPKQKEFVITSLKGLGFVTLMCGDGTNDVGALKHAHIGVALLANA 914
Query: 831 ---VPPTQSGNSSSEASKDEN 848
+P + N E S E+
Sbjct: 915 PERMPEKKKRNKEKEYSSGES 935
|
|
| UNIPROTKB|F1PRS5 ATP13A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1780 (631.7 bits), Expect = 1.8e-183, P = 1.8e-183
Identities = 386/851 (45%), Positives = 525/851 (61%)
Query: 7 GGKVVDRVDLLRKKHWVWRLDVWPFA-ILYSGWLIAIVPS--------IDFGDAAI-VLG 56
G ++V V R+ + RL V PFA +LY W+ A + +AA+ VL
Sbjct: 48 GDELVAAVWPYRRLALLRRLTVLPFAGLLYPAWVGAAAAGCWGWGSSWVQIPEAALLVLA 107
Query: 57 GLVAFHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSA 116
+ H L L WSV C + D A K+ P GS E+V L +
Sbjct: 108 TICLAHALTVLSGHWSVHAHCALTCTPEYDPRKATFVKVVPTPNNGSTELVALH--RDEG 165
Query: 117 VSSTPVDEDEICFDFRKQHFIYSR-EKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVAT 175
V + F+F+K + Y EK F + +P + F YY G +++I A
Sbjct: 166 EDGQEV----LSFEFQKIKYSYDTLEKKRFLPVAFPVRNAFSYYQSNRGFQEDSEIRAAE 221
Query: 176 EKWGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFEST 235
+K+G N E P F +L KE PFFVFQVFCVGLWCLDEYWYYS+FTL ML FE++
Sbjct: 222 KKFGSNKAEMVVPDFSELFKERATAPFFVFQVFCVGLWCLDEYWYYSVFTLSMLVAFEAS 281
Query: 236 MAKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVP 295
+ + +++ ++EIR++ I V+R KW +A ++VPGD+VSIGRS ++ VP
Sbjct: 282 LVQQQMRNMSEIRKMGNKPHMIQVYRSRKWRPIASDEIVPGDIVSIGRSP----QENLVP 337
Query: 296 ADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRD-KSHVLFGGTKILQHTP 354
D+L+L G IV+EA+LTGES PQ K I L + D + HV+FGGTK++QH P
Sbjct: 338 CDVLLLRGRCIVDEAMLTGESVPQMKEPIEDLNPDRVLDLQADSRLHVIFGGTKVVQHIP 397
Query: 355 DK--TFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFA 412
+ T LK D GC+A VLRTGF TSQGKL+RTILF +RVTAN+ E+ +FILFL+VFA
Sbjct: 398 PQKATTGLKPVDNGCVAYVLRTGFNTSQGKLLRTILFGVKRVTANNLETFIFILFLLVFA 457
Query: 413 VIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFC 472
+ AA YV +G +DP+R++YKLFL C+LI+TSV+PPELP+ELS+AVNTSLIALA+ ++C
Sbjct: 458 IAAAAYVWIEGTKDPSRNRYKLFLECTLILTSVVPPELPIELSLAVNTSLIALAKLYMYC 517
Query: 473 TEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCH 532
TEPFRIPFAGKV++CCFDKTGTLTSD + RGV GL + + ++ +PV T LASCH
Sbjct: 518 TEPFRIPFAGKVEVCCFDKTGTLTSDSLVVRGVAGLRDGKEVTPVSNIPVETHRALASCH 577
Query: 533 ALVFVDN-KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSV 591
+L+ +D+ LVGDPLEKA L +DW+ DEK P+ ++I QR HFAS LKRMSV
Sbjct: 578 SLMQLDDGTLVGDPLEKAMLTAVDWTLTKDEKVFPRSIKTQGLKIHQRFHFASALKRMSV 637
Query: 592 VVRVQEE------FFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPD 645
+ ++ + A VKGAPET+ P Y + + + +G+RVLAL +K L
Sbjct: 638 LASYEKLGSTDLCYIAAVKGAPETLHSMFAQCPPDYHHIHTEISREGARVLALGYKELGH 697
Query: 646 MTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTAC 705
+T AR + R+ +E L F GF V +CP++ DS ++ E++N+S + MITGD LTAC
Sbjct: 698 LTHQQAREVKREALECNLKFVGFIVVSCPLKADSKSVIREIQNASHRVVMITGDNPLTAC 757
Query: 706 YVASQVHIVTKP-VLILCP-VKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDC 763
+VA ++H + K LIL P + G+ EW S D + + + + L H LC+ GD
Sbjct: 758 HVAQELHFIEKAQTLILQPPTEKGRPCEWRSIDGSVTLPLARGSPKSLALEHALCLTGDG 817
Query: 764 FEMLQ--QTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQA 821
LQ +L +IP+V+VFARVAP+QKE ++T+ K +G +TLMCGDGTNDVGALK A
Sbjct: 818 LAHLQAEDPQQLLHLIPHVQVFARVAPKQKEFVITSLKELGYVTLMCGDGTNDVGALKHA 877
Query: 822 HVGVALLNAVP 832
VGVALL P
Sbjct: 878 DVGVALLANAP 888
|
|
| UNIPROTKB|Q9HD20 ATP13A1 "Probable cation-transporting ATPase 13A1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1778 (630.9 bits), Expect = 2.9e-183, P = 2.9e-183
Identities = 388/851 (45%), Positives = 527/851 (61%)
Query: 7 GGKVVDRVDLLRKKHWVWRLDVWPFA-ILYSGWLIAIVPS--------IDFGDAAI-VLG 56
G ++V V R+ + RL V PFA +LY WL A + +AA+ VL
Sbjct: 46 GDELVAAVWPYRRLALLRRLTVLPFAGLLYPAWLGAAAAGCWGWGSSWVQIPEAALLVLA 105
Query: 57 GLVAFHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSA 116
+ H L L WSV C + D A K+ P GS E+V L +
Sbjct: 106 TICLAHALTVLSGHWSVHAHCALTCTPEYDPSKATFVKVVPTPNNGSTELVALH--RNEG 163
Query: 117 VSSTPVDEDEICFDFRKQHFIYSR-EKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVAT 175
V + F+F+K + Y EK F + +P F YY G +++I A
Sbjct: 164 EDGLEV----LSFEFQKIKYSYDALEKKQFLPVAFPVGNAFSYYQSNRGFQEDSEIRAAE 219
Query: 176 EKWGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFEST 235
+K+G N E P F +L KE PFFVFQVFCVGLWCLDEYWYYS+FTL ML FE++
Sbjct: 220 KKFGSNKAEMVVPDFSELFKERATAPFFVFQVFCVGLWCLDEYWYYSVFTLSMLVAFEAS 279
Query: 236 MAKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVP 295
+ + +++ ++EIR++ I V+R KW +A ++VPGD+VSIGRS ++ VP
Sbjct: 280 LVQQQMRNMSEIRKMGNKPHMIQVYRSRKWRPIASDEIVPGDIVSIGRSP----QENLVP 335
Query: 296 ADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRD-KSHVLFGGTKILQHTP 354
D+L+L G IV+EA+LTGES PQ K I L + D + HV+FGGTK++QH P
Sbjct: 336 CDVLLLRGRCIVDEAMLTGESVPQMKEPIEDLSPDRVLDLQADSRLHVIFGGTKVVQHIP 395
Query: 355 DK--TFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFA 412
+ T LK D GC+A VLRTGF TSQGKL+RTILF +RVTAN+ E+ +FILFL+VFA
Sbjct: 396 PQKATTGLKPVDSGCVAYVLRTGFNTSQGKLLRTILFGVKRVTANNLETFIFILFLLVFA 455
Query: 413 VIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFC 472
+ AA YV +G +DP+R++YKLFL C+LI+TSV+PPELP+ELS+AVNTSLIALA+ ++C
Sbjct: 456 IAAAAYVWIEGTKDPSRNRYKLFLECTLILTSVVPPELPIELSLAVNTSLIALAKLYMYC 515
Query: 473 TEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCH 532
TEPFRIPFAGKV++CCFDKTGTLTSD + RGV GL + + ++ +PV T LASCH
Sbjct: 516 TEPFRIPFAGKVEVCCFDKTGTLTSDSLVVRGVAGLRDGKEVTPVSSIPVETHRALASCH 575
Query: 533 ALVFVDN-KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSV 591
+L+ +D+ LVGDPLEKA L +DW+ DEK P+ ++I QR HFAS LKRMSV
Sbjct: 576 SLMQLDDGTLVGDPLEKAMLTAVDWTLTKDEKVFPRSIKTQGLKIHQRFHFASALKRMSV 635
Query: 592 VVRVQEE------FFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPD 645
+ ++ + A VKGAPET+ + P Y + + + +G+RVLAL +K L
Sbjct: 636 LASYEKLGSTDLCYIAAVKGAPETLHSMFSQCPPDYHHIHTEISREGARVLALGYKELGH 695
Query: 646 MTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTAC 705
+T AR + R+ +E L F GF V +CP++ DS ++ E++N+S + MITGD LTAC
Sbjct: 696 LTHQQAREVKREALECSLKFVGFIVVSCPLKADSKAVIREIQNASHRVVMITGDNPLTAC 755
Query: 706 YVASQVHIVTKP-VLILCPV-KNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDC 763
+VA ++H + K LIL P + G+ EW S D + + + + L + LC+ GD
Sbjct: 756 HVAQELHFIEKAHTLILQPPSEKGRQCEWRSIDGSIVLPLARGSPKALALEYALCLTGDG 815
Query: 764 FEMLQQTSA--VLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQA 821
LQ T +LR+IP+V+VFARVAP+QKE ++T+ K +G +TLMCGDGTNDVGALK A
Sbjct: 816 LAHLQATDPQQLLRLIPHVQVFARVAPKQKEFVITSLKELGYVTLMCGDGTNDVGALKHA 875
Query: 822 HVGVALLNAVP 832
VGVALL P
Sbjct: 876 DVGVALLANAP 886
|
|
| UNIPROTKB|F1S7C4 ATP13A1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1778 (630.9 bits), Expect = 2.9e-183, P = 2.9e-183
Identities = 388/851 (45%), Positives = 524/851 (61%)
Query: 7 GGKVVDRVDLLRKKHWVWRLDVWPFA-ILYSGWLIAIVPSI-DFGD--------AAIVLG 56
G ++V V R+ + RL V PFA +LY WL A +G A +VL
Sbjct: 46 GDELVAAVWPYRRLALLRRLTVLPFAGLLYPAWLGAAAAGCWGWGSSWAQIPEAALLVLA 105
Query: 57 GLVAFHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSA 116
+ H L L WSV C + D A K+ P GS E+V L +
Sbjct: 106 TICLAHALTVLSGHWSVHAHCALTCTPEYDPSKATFVKVVPTPNNGSTELVALH--RDEG 163
Query: 117 VSSTPVDEDEICFDFRKQHFIYSR-EKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVAT 175
V + F+F+K + Y EK F + +P F YY G +++I A
Sbjct: 164 EDGQEV----LSFEFQKIKYSYDALEKKRFLPVAFPVGNAFSYYQSNRGFQEDSEIRAAE 219
Query: 176 EKWGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFEST 235
+K+G N E P F +L KE PFFVFQVFCVGLWCLDEYWYYS+FTL ML FE++
Sbjct: 220 KKFGSNKAEMVVPDFSELFKERATAPFFVFQVFCVGLWCLDEYWYYSVFTLSMLVAFEAS 279
Query: 236 MAKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVP 295
+ + +++ ++EIR++ I V+R KW +A ++VPGD+VSIGRS ++ VP
Sbjct: 280 LVQQQMRNMSEIRKMGNKPHMIQVYRSRKWRPIASDEVVPGDIVSIGRSP----QENLVP 335
Query: 296 ADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRD-KSHVLFGGTKILQHTP 354
D+L+L G IV+EA+LTGES PQ K I L + D + HV+FGGTK++QH P
Sbjct: 336 CDVLLLRGRCIVDEAMLTGESVPQMKEPIEDLSPNRVLDLQADSRLHVIFGGTKVVQHIP 395
Query: 355 DK--TFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFA 412
+ T LK D GC+A VLRTGF TSQGKL+RTILF +RVTAN+ E+ +FILFL+VFA
Sbjct: 396 PQKATTGLKPVDNGCVAFVLRTGFNTSQGKLLRTILFGVKRVTANNLETFIFILFLLVFA 455
Query: 413 VIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFC 472
+ AA YV +G +DP+R++YKLFL C+LI+TSV+PPELP+ELS+AVNTSLIALA+ ++C
Sbjct: 456 IAAAAYVWIEGTKDPSRNRYKLFLECTLILTSVVPPELPIELSLAVNTSLIALAKLYMYC 515
Query: 473 TEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCH 532
TEPFRIPFAGKV++CCFDKTGTLTSD + RGV GL + + ++ +P+ T LASCH
Sbjct: 516 TEPFRIPFAGKVEVCCFDKTGTLTSDSLVVRGVAGLRDGKEVTPVSNIPIETHRALASCH 575
Query: 533 ALVFVDN-KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSV 591
+L+ +D+ LVGDPLEKA L +DW+ DEK P+ ++I QR HFAS LKRMSV
Sbjct: 576 SLMQLDDGTLVGDPLEKAMLTAVDWTLTKDEKVFPRSIKTQGLKIHQRFHFASALKRMSV 635
Query: 592 VVRVQEE------FFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPD 645
+ ++ + A VKGAPET+ P Y + + + +G+RVLAL +K L
Sbjct: 636 LASYEKLGSTDLCYIAAVKGAPETLHSMFAQCPPDYHHIHTEISREGARVLALGYKELGH 695
Query: 646 MTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTAC 705
+T AR + R+ +E L F GF V +CP++ DS ++ E++N+S + MITGD LTAC
Sbjct: 696 LTHQQAREVKREALECNLKFVGFIVVSCPLKADSKAVIREIQNASHRVVMITGDNPLTAC 755
Query: 706 YVASQVHIVTKP-VLILCP-VKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDC 763
+VA ++H + K LIL P + G+ EW S D + + + + L H LC+ GD
Sbjct: 756 HVAQELHFIEKAHTLILQPPTEKGQPCEWRSIDGSIILPLAPGSPKALALEHALCLTGDG 815
Query: 764 FEMLQ--QTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQA 821
LQ +LR+IPYV+VFARVAP+QKE ++T+ K +G +TLMCGDGTNDVGALK A
Sbjct: 816 LAHLQAEDPQLLLRLIPYVQVFARVAPKQKEFVITSLKELGYVTLMCGDGTNDVGALKHA 875
Query: 822 HVGVALLNAVP 832
VGVALL P
Sbjct: 876 DVGVALLANAP 886
|
|
| RGD|1306033 Atp13a1 "ATPase type 13A1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1769 (627.8 bits), Expect = 2.6e-182, P = 2.6e-182
Identities = 385/851 (45%), Positives = 524/851 (61%)
Query: 7 GGKVVDRVDLLRKKHWVWRLDVWPFA-ILYSGWLIAIVPSI-DFGD--------AAIVLG 56
G ++V V R+ + RL V PFA +LY WL A +G+ A + L
Sbjct: 40 GDELVAAVWPYRRLALLRRLTVLPFAGLLYPAWLGAAASGCWGWGNSWTQIPEAALLALA 99
Query: 57 GLVAFHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSA 116
+ H L L WSV C + +D + K+ P GS E+V L +
Sbjct: 100 TICLAHALTILSGHWSVHAHCALTCTPEHDPNKVTFVKVVPTPNNGSTELVALH--RDKG 157
Query: 117 VSSTPVDEDEICFDFRKQHFIYSR-EKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVAT 175
V + F+F+K + Y EK F + +P F YY G ++ I A
Sbjct: 158 EDGLEV----LSFEFQKIKYSYDALEKKQFLPVAFPVGNAFSYYQSNRGFQEDSDIRAAE 213
Query: 176 EKWGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFEST 235
+K+G N E P F +L KE PFFVFQVFCVGLWCLDEYWYYS+FTL ML FE++
Sbjct: 214 KKFGSNKAEMAVPDFSELFKERATAPFFVFQVFCVGLWCLDEYWYYSVFTLSMLVAFEAS 273
Query: 236 MAKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVP 295
+ + +++ ++EIR++ I V+R KW +A D+VPGD+VSIGRS ++ VP
Sbjct: 274 LVQQQMRNMSEIRKMGNKPHMIQVYRSRKWRPIASDDIVPGDIVSIGRSP----QENLVP 329
Query: 296 ADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRD-KSHVLFGGTKILQHTP 354
D+L+L G IV+EA+LTGES PQ K I L + D + HV+FGGTK++QH P
Sbjct: 330 CDVLLLRGRCIVDEAMLTGESVPQMKEPIEDLSPDRVLDLQADARLHVIFGGTKVVQHIP 389
Query: 355 DK--TFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFA 412
+ T LK D GC+A VLRTGF TSQGKL+RTILF +RVTAN+ E+ +FILFL+VFA
Sbjct: 390 PQKATSGLKPVDNGCVAFVLRTGFNTSQGKLLRTILFGVKRVTANNLETFIFILFLLVFA 449
Query: 413 VIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFC 472
+ AA YV +G +DP+R++YKLFL C+LI+TSV+PPELP+ELS+AVNTSLIALA+ ++C
Sbjct: 450 IAAAAYVWIEGTKDPSRNRYKLFLECTLILTSVVPPELPIELSLAVNTSLIALAKLYMYC 509
Query: 473 TEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCH 532
TEPFRIPFAGKV++CCFDKTGTLTSD + RGV GL + + ++ +P+ T LASCH
Sbjct: 510 TEPFRIPFAGKVEVCCFDKTGTLTSDSLVVRGVAGLRDGKEVTPVSSIPIETHRALASCH 569
Query: 533 ALVFVDN-KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSV 591
+L+ +D+ LVGDPLEKA L +DW+ DEK P+ ++I QR HFAS LKRMSV
Sbjct: 570 SLMQLDDGTLVGDPLEKAMLTAVDWTLTKDEKVFPRSIKTQGLKIHQRFHFASALKRMSV 629
Query: 592 VVRVQEE------FFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPD 645
+ ++ + A VKGAPET+ + P Y + + + +G+RVLAL +K L
Sbjct: 630 LASYEKLGSTDLCYIAAVKGAPETLHSMFSQCPPDYHHIHTEISREGARVLALGYKELGH 689
Query: 646 MTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTAC 705
+T AR + R+ +E L F GF V +CP++ DS ++ E++N+S + MITGD LTAC
Sbjct: 690 LTHQQAREVKREALECSLKFVGFIVVSCPLKADSKAVIREIQNASHRVVMITGDNPLTAC 749
Query: 706 YVASQVHIVTKP-VLILCPV-KNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDC 763
+VA ++H + K LIL P + G+ EW S D + + + + L H LC+ GD
Sbjct: 750 HVAQELHFIDKAHTLILHPPSEKGQPCEWRSIDNSIVLPLTLGSPKALALEHALCLTGDG 809
Query: 764 FEMLQQTSA--VLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQA 821
LQ +L +IP+V+VFARVAP+QKE ++T+ K +G +TLMCGDGTNDVGALK A
Sbjct: 810 LAHLQAVDPQQLLHLIPHVQVFARVAPKQKEFVITSLKELGYVTLMCGDGTNDVGALKHA 869
Query: 822 HVGVALLNAVP 832
VGVALL P
Sbjct: 870 DVGVALLANAP 880
|
|
| MGI|MGI:2180801 Atp13a1 "ATPase type 13A1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1762 (625.3 bits), Expect = 1.4e-181, P = 1.4e-181
Identities = 385/851 (45%), Positives = 526/851 (61%)
Query: 7 GGKVVDRVDLLRKKHWVWRLDVWPFA-ILYSGWLIAIVPSI-DFG-------DAAIV-LG 56
G ++V V R+ + RL V PFA +LY WL A +G +AA++ L
Sbjct: 43 GDELVAAVWPYRRLALLRRLTVLPFAGLLYPAWLGAAASGCWGWGSSWTQIPEAALLALA 102
Query: 57 GLVAFHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSA 116
+ H L L WSV C + D + K+ P GS E+V L +
Sbjct: 103 TICLAHALTVLSGHWSVHAHCALTCTPEYDPNKVTFVKVVPTPNNGSTELVALH--RDKG 160
Query: 117 VSSTPVDEDEICFDFRKQHFIYSR-EKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVAT 175
V + F+F+K + Y EK F + +P F YY G +++I A
Sbjct: 161 EDGLEV----LSFEFQKIKYSYDALEKKQFLPVAFPVGNAFSYYQSNRGFQEDSEIRAAE 216
Query: 176 EKWGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFEST 235
+K+G N E P F +L KE PFFVFQVFCVGLWCLDEYWYYS+FTL ML FE++
Sbjct: 217 KKFGSNKAEMVVPDFSELFKERATAPFFVFQVFCVGLWCLDEYWYYSVFTLSMLVAFEAS 276
Query: 236 MAKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVP 295
+ + +++ ++EIR++ I V+R KW +A D+VPGD+VSIGRS ++ VP
Sbjct: 277 LVQQQMRNMSEIRKMGNKPHMIQVYRSRKWRPVASDDIVPGDIVSIGRSP----QENLVP 332
Query: 296 ADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRD-KSHVLFGGTKILQHTP 354
D+L+L G IV+EA+LTGES PQ K I L + D + HV+FGGTK++QH P
Sbjct: 333 CDVLLLRGRCIVDEAMLTGESVPQMKEPIEDLSPDRVLDLQADARLHVIFGGTKVVQHIP 392
Query: 355 DK--TFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFA 412
+ T LK D GC+A VLRTGF TSQG+L+RTILF +RVTAN+ E+ +FILFL+VFA
Sbjct: 393 PQKATSGLKPVDNGCVAFVLRTGFNTSQGRLLRTILFGVKRVTANNLETFIFILFLLVFA 452
Query: 413 VIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFC 472
+ AA YV +G +DP+R++YKLFL C+LI+TSV+PPELP+ELS+AVNTSLIALA+ ++C
Sbjct: 453 IAAAAYVWVEGTKDPSRNRYKLFLECTLILTSVVPPELPIELSLAVNTSLIALAKLYMYC 512
Query: 473 TEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCH 532
TEPFRIPFAGKV++CCFDKTGTLTSD + RGV GL + + ++ +P+ T LASCH
Sbjct: 513 TEPFRIPFAGKVEVCCFDKTGTLTSDSLVVRGVAGLRDGKEVTPVSSIPIETHRALASCH 572
Query: 533 ALVFVDN-KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSV 591
+L+ +D+ LVGDPLEKA L +DW+ DEK P+ ++I QR HFAS LKRMSV
Sbjct: 573 SLMQLDDGTLVGDPLEKAMLTAVDWTLTKDEKVFPRSIKTQGLKIHQRFHFASALKRMSV 632
Query: 592 VVRVQEE------FFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPD 645
+ ++ + A VKGAPET+ + P Y + + + +G+RVLAL +K L
Sbjct: 633 LASYEKLGSTDLCYIAAVKGAPETLHSMFSQCPPDYHHIHTEISREGARVLALGYKELGH 692
Query: 646 MTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTAC 705
+T AR + R+ +E L F GF V +CP++ DS ++ E++N+S + MITGD LTAC
Sbjct: 693 LTHQQAREIKREALECSLKFVGFIVVSCPLKADSKAVIREIQNASHRVVMITGDNPLTAC 752
Query: 706 YVASQVHIVTKP-VLILCPV-KNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDC 763
+VA ++H + K LIL P + G+ EW S D + + + + L H LC+ GD
Sbjct: 753 HVAQELHFIDKAHTLILHPPSEKGQPCEWRSIDSSIVLPLTLGSPKALALEHALCLTGDG 812
Query: 764 FEMLQQTSA--VLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQA 821
LQ +L +IP+V+VFARVAP+QKE ++T+ K +G +TLMCGDGTNDVGALK A
Sbjct: 813 LAHLQAVDPQQLLCLIPHVQVFARVAPKQKEFVITSLKELGYVTLMCGDGTNDVGALKHA 872
Query: 822 HVGVALLNAVP 832
VGVALL P
Sbjct: 873 DVGVALLANAP 883
|
|
| UNIPROTKB|F1MYA8 ATP13A1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1761 (625.0 bits), Expect = 1.8e-181, P = 1.8e-181
Identities = 383/851 (45%), Positives = 521/851 (61%)
Query: 7 GGKVVDRVDLLRKKHWVWRLDVWPFA-ILYSGWLIAIVPSI-DFGD--------AAIVLG 56
G ++V V R+ + RL + PF +LY WL + +G A +VL
Sbjct: 41 GDELVAAVWPYRRLALLRRLTLLPFVGLLYPAWLGSAATGFWGWGSSWAQIPEAALLVLA 100
Query: 57 GLVAFHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSA 116
+ H L L WSV C + D A K+ P GS E+V L +
Sbjct: 101 TICLAHALTVLSGHWSVHAHCALTCTPEYDARKATFVKVVPTPNNGSTELVALH--RDEG 158
Query: 117 VSSTPVDEDEICFDFRKQHFIYSR-EKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVAT 175
V + F+F+K + Y EK F + +P F +Y G +++I A
Sbjct: 159 EDGQEV----LSFEFQKIKYSYDALEKKRFLPVAFPVGNAFSFYQSNRGFQEDSEIRAAE 214
Query: 176 EKWGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFEST 235
+K+G N E P F +L KE PFFVFQVFCVGLWCLDEYWYYS+FTL ML FE++
Sbjct: 215 KKFGSNKAEMVVPDFSELFKERATAPFFVFQVFCVGLWCLDEYWYYSVFTLSMLVAFEAS 274
Query: 236 MAKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVP 295
+ + +++ ++EIR++ I V+R KW +A ++VPGD+VSIGRS ++ VP
Sbjct: 275 LVQQQMRNMSEIRKMGNKPHMIQVYRSRKWRPIASDEIVPGDIVSIGRSP----QENLVP 330
Query: 296 ADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRD-KSHVLFGGTKILQHTP 354
D+L+L G IV+EA+LTGES PQ K I L + D + HV+FGGTK++QH P
Sbjct: 331 CDVLLLRGRCIVDEAMLTGESVPQMKEPIEDLSPSRVLDLQADARLHVVFGGTKVVQHIP 390
Query: 355 DKTFP--LKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFA 412
+ LK D GC+A VLRTGF TSQGKL+RTILF +RVTAN+ E+ +FILFL+VFA
Sbjct: 391 PQKAAAGLKPVDNGCVAYVLRTGFNTSQGKLLRTILFGVKRVTANNLETFIFILFLLVFA 450
Query: 413 VIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFC 472
+ AA YV +G +DP+R++YKLFL C+LI+TSV+PPELP+ELS+AVNTSLIALA+ ++C
Sbjct: 451 IAAAAYVWIEGTKDPSRNRYKLFLECTLILTSVVPPELPIELSLAVNTSLIALAKLYMYC 510
Query: 473 TEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCH 532
TEPFRIPFAGKV++CCFDKTGTLTSD + RGV GL + + ++ +P+ T LASCH
Sbjct: 511 TEPFRIPFAGKVEVCCFDKTGTLTSDSLVVRGVAGLRDGKEVTPVSSIPIETHRALASCH 570
Query: 533 ALVFVDN-KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSV 591
+L+ +D+ LVGDPLEKA L +DW+ DEK P+ ++I QR HFAS LKRMSV
Sbjct: 571 SLMQLDDGTLVGDPLEKAMLTAVDWTLTRDEKVFPRSIKTQGLKIHQRFHFASALKRMSV 630
Query: 592 VVRVQEE------FFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPD 645
+ ++ + A VKGAPET+ P Y + + + +G+RVLAL +K L
Sbjct: 631 LASYEKLGSTDLCYIAAVKGAPETLHSMFAQCPPDYHHIHTEISREGARVLALGYKELGH 690
Query: 646 MTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTAC 705
+T AR + R+ +E L F GF V +CP++ DS ++ E++N+S + MITGD LTAC
Sbjct: 691 LTHQQAREVKREALECNLKFVGFIVVSCPLKADSKAVIREIQNASHRVVMITGDNPLTAC 750
Query: 706 YVASQVHIVTKP-VLILCP-VKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDC 763
+VA ++H + K LIL P G + EW S D + ++ + L H LC+ GD
Sbjct: 751 HVARELHFIEKAQTLILQPPTGKGGLCEWRSIDGSISEPLAQGSPKALAREHALCLTGDG 810
Query: 764 FEMLQ--QTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQA 821
LQ +LR+IPYV+VFARVAP+QKE ++T+ K +G +TLMCGDGTNDVGALK A
Sbjct: 811 LAHLQAEDPQLLLRLIPYVQVFARVAPKQKEFVITSLKELGYVTLMCGDGTNDVGALKHA 870
Query: 822 HVGVALLNAVP 832
VGVALL P
Sbjct: 871 DVGVALLANAP 881
|
|
| UNIPROTKB|H9L041 ATP13A1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1739 (617.2 bits), Expect = 3.9e-179, P = 3.9e-179
Identities = 366/827 (44%), Positives = 514/827 (62%)
Query: 22 WVWRLDVWPFAILYSGWLIAIVPSIDFGDAAIV-LGGLVAFHILVWLFTAWSVDFKCFAH 80
W+W VW + A P +AA++ L + H+L L WSV C
Sbjct: 51 WLWGPRVWAAWRAAAEEEEAQGPGPAPPEAALLALAAIGVVHLLTALSGLWSVHAHCALT 110
Query: 81 YSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSSTPVDEDEICFDFRKQHFIYS- 139
+ A K+ P GS E+VPL + ++ + F+F+K + Y
Sbjct: 111 CVREPSPKKATLAKVVPTPNNGSAELVPLHRDQDED------GQEALSFEFQKIKYSYEI 164
Query: 140 REKGTFCKLPYPTKETFGYYLKCTGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCM 199
K F + +P + YY G+ + I A +K+G N E P F +L KE
Sbjct: 165 NGKKQFLPVAFPVEHPLCYYQNARGYQEDKDIRAAEKKYGTNKAEMVVPEFLELFKERAT 224
Query: 200 EPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRVDNQTIMV 259
PFFVFQVFCVGLWCLDEYWYYS+FTL ML FE+++ + +++ ++EIR++ I V
Sbjct: 225 APFFVFQVFCVGLWCLDEYWYYSVFTLSMLVAFEASLVQQQMRNMSEIRKMGNKPYMIQV 284
Query: 260 HRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQ 319
+R KW ++ +++PGD+VSIGRS + VP D+L+L G IV+EA+LTGES PQ
Sbjct: 285 YRNRKWRPISSDEIIPGDIVSIGRSP----HENLVPCDVLLLRGRCIVDEAMLTGESVPQ 340
Query: 320 WKVSIMGRETGEKLSARRD-KSHVLFGGTKILQHTPDK--TFPLKTPDGGCLAVVLRTGF 376
K + L + D + H++FGGTK++QH P + + LK D GC+A LRTGF
Sbjct: 341 MKEPVEDLSPEHVLDMQTDARLHIIFGGTKVVQHIPPQKASTGLKPVDNGCVAYALRTGF 400
Query: 377 ETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFL 436
TSQGKL+RTILF +RVTAN+ E+ +FILFL+VFAV AA YV +G +DP+R++YKLFL
Sbjct: 401 NTSQGKLLRTILFGVKRVTANNLETFIFILFLLVFAVAAASYVWIEGTKDPSRNRYKLFL 460
Query: 437 SCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLT 496
C+LI+TSV+PPELP+ELS+AVNTSLIALA+ ++CTEPFRIPFAGKV++CCFDKTGTLT
Sbjct: 461 ECTLILTSVVPPELPIELSLAVNTSLIALAKLYVYCTEPFRIPFAGKVEVCCFDKTGTLT 520
Query: 497 SDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDN-KLVGDPLEKAALKGID 555
SD + RGV GL + + ++ +P+ T +A+CH+LV +D+ LVGDPLEKA L +D
Sbjct: 521 SDHLVVRGVAGLRDGKEVTPVSDIPIETHRAIATCHSLVQLDDGTLVGDPLEKAMLMAVD 580
Query: 556 WSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEE------FFAFVKGAPET 609
W+ DEK P+ ++I QR HFAS LKRMSV+ ++ + A VKGAPET
Sbjct: 581 WTLTKDEKVFPRSIKTQGLKIHQRFHFASALKRMSVLASYEKIGAADLCYIAAVKGAPET 640
Query: 610 IQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFA 669
+ L+ PS+Y + + +H+G+RVLAL +K L +T R + R+ +E L FAGF
Sbjct: 641 LHKMLSQCPSNYNAVHTEISHEGARVLALGYKELGHLTHQQVREMKREALECDLRFAGFI 700
Query: 670 VFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKP-VLILCP-VKNG 727
V +CP++ DS ++ E++N+S + MITGD LTAC+VA ++H + + LIL P
Sbjct: 701 VVSCPLKTDSRSVIREIQNASHHVVMITGDNPLTACHVARELHFLQREHTLILQPPASKD 760
Query: 728 KVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSA--VLRVIPYVKVFAR 785
++W S + + + LT +DLC+ G+ LQ + +LR+IP+++VFAR
Sbjct: 761 STWQWQSINGSIVFPILPSSLRELTQHYDLCVTGEGLSHLQALNRQQLLRLIPHIQVFAR 820
Query: 786 VAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVP 832
V P+QKE ++TT K++G +TLMCGDGTNDVGALK A VGVALL P
Sbjct: 821 VVPKQKEFVITTLKSLGYVTLMCGDGTNDVGALKHADVGVALLANAP 867
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9LT02 | ATY1_ARATH | 3, ., 6, ., 3, ., - | 0.8119 | 0.9765 | 0.7065 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| gw1.135.25.1 | p-type ATPase transporter (1185 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| PPO5 | polyphenol oxidase (582 aa) | • | 0.700 | ||||||||
| PPO2 | polyphenol oxidase (582 aa) | • | 0.688 | ||||||||
| PPO3 | polyphenol oxidase (590 aa) | • | 0.688 | ||||||||
| eugene3.37630002 | multicopper oxidase (228 aa) | • | 0.510 | ||||||||
| estExt_Genewise1_v1.C_LG_XIX2228 | multicopper oxidase (553 aa) | • | 0.510 | ||||||||
| estExt_Genewise1_v1.C_LG_VII3096 | multicopper oxidase (EC-1.10.3.3) (538 aa) | • | 0.510 | ||||||||
| estExt_Genewise1_v1.C_LG_II2639 | multicopper oxidase (548 aa) | • | 0.510 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 853 | |||
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 0.0 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-124 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-124 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 1e-34 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 2e-31 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 2e-27 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 3e-27 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 1e-26 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 7e-26 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 8e-25 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 8e-21 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 5e-19 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 5e-13 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 6e-13 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 6e-11 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 4e-10 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 5e-10 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 1e-09 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 3e-09 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 1e-07 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 3e-07 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 1e-06 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 5e-06 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 8e-06 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 9e-06 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 1e-05 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 2e-05 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 2e-05 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 2e-05 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 2e-04 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 2e-04 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 3e-04 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 9e-04 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 0.001 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 0.003 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 0.003 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 0.004 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 932 bits (2410), Expect = 0.0
Identities = 343/839 (40%), Positives = 460/839 (54%), Gaps = 58/839 (6%)
Query: 38 WLIAIVPSIDFGDAAIVLGGLVAFHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITP 97
+ I I L L+ LV L W ++K Y +++ + P
Sbjct: 3 TIGISAYKISPFKLIIYLVTLILTFGLVLLLLTWLPEWKVKLRYVPVSNEDAETVVIVDP 62
Query: 98 VKFCGSKEVVPLQFWKQSAVSST--PV--DEDEICFDFRKQHFIY-SREKGTFCKLPYPT 152
GS +V L S T V E+ I FDFRKQ F Y +E F LPY
Sbjct: 63 TPNSGSDYIVELSNKSLSNDLQTENAVEGGEEPIYFDFRKQRFSYHEKELKIFSPLPYLF 122
Query: 153 KET-FGYYLKCTGHS---TEAKIAVATEKWGRNVFEYPQPTFQKLMKENCMEPFFVFQVF 208
KE FG Y C GHS T IA K+G+N E P P+F +L+KE + PF+VFQVF
Sbjct: 123 KEKSFGVYSTCAGHSNGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVF 182
Query: 209 CVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKL 268
V LW LDEY+YYSL +FM S K + +R + Q+++V R GKWV +
Sbjct: 183 SVILWLLDEYYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVHKPQSVIVIRNGKWVTI 242
Query: 269 AGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSIMGRE 328
A +LVPGD+VSI R E+K++P D ++L GS IVNE++LTGES P K I
Sbjct: 243 ASDELVPGDIVSIPRP-----EEKTMPCDSVLLSGSCIVNESMLTGESVPVLKFPIPDNG 297
Query: 329 TGEKL--SARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRT 386
++ K HVLFGGTKILQ P D GCLA+V+RTGF TS+G+L+R+
Sbjct: 298 DDDEDLFLYETSKKHVLFGGTKILQIRPYPG------DTGCLAIVVRTGFSTSKGQLVRS 351
Query: 387 ILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVI 446
IL+ RV +S FILFL V A+I Y + + ++D R K+ L IIT V+
Sbjct: 352 ILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIKDG-RPLGKIILRSLDIITIVV 410
Query: 447 PPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVV 506
PP LP ELSI +N SL L ++GIFCT PFRI FAGK+D+CCFDKTGTLT D ++ RGV
Sbjct: 411 PPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQ 470
Query: 507 GLSNAE-----LEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSY-KS 560
GLS + + +D + P T + LA+CH+L ++ KLVGDPL+K + W+ +
Sbjct: 471 GLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEED 530
Query: 561 DEKAMPKRG--------GGNAVQIVQRHHFASHLKRMSVVVRVQEEFF--AFVKGAPETI 610
DE A P + I++R F+S L+RMSV+V +E AFVKGAPETI
Sbjct: 531 DESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETI 590
Query: 611 QDRL--TDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGF 668
Q +PS Y E K YT +G RVLALA+K LP +T+ A+ L RD VE+ LTF GF
Sbjct: 591 QSLCSPETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGF 650
Query: 669 AVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKP-VLIL---CPV 724
VF P++ D+ +++ ELK +S MITGD LTA +VA + IV LIL P
Sbjct: 651 IVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPP 710
Query: 725 KNGKV--YEWVSPDE------TEKIQYSEK---EVEGLTDAHDLCIGGDCFEMLQQTS-- 771
++GK ++ D +I Y + L + L + G F +LQ S
Sbjct: 711 ESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPE 770
Query: 772 AVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNA 830
+LR++ + VFAR+AP+QKE ++ + + MCGDG ND GALKQA VG++L A
Sbjct: 771 LLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA 829
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 385 bits (992), Expect = e-124
Identities = 184/609 (30%), Positives = 261/609 (42%), Gaps = 137/609 (22%)
Query: 224 FTLFMLFMFESTMAKSRLKTLTEIRRVR---VDNQTIMVHRCGKWVKLAGTDLVPGDVVS 280
F LF++ +F + K +LK +R + V+ + V R W ++ DLVPGDVV
Sbjct: 1 FILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLR-NGWKEIPAKDLVPGDVVL 59
Query: 281 IGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKS 340
+ SG+T VPAD ++L GS V+E+ LTGES P K ++ ++G
Sbjct: 60 V--KSGET-----VPADGVLLSGSCFVDESNLTGESNPVLKTALKETQSGTITGDLVFAG 112
Query: 341 HVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWE 400
+FGGT I+ TP G +AVV++TGFET RT L S N
Sbjct: 113 TYVFGGTLIVVVTPTGILT----TVGRIAVVVKTGFET------RTPLQSKRDRLENF-- 160
Query: 401 SGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNT 460
+FILFL++ A+ Y+ +G + S +K L +++ V+PP LP +++A+
Sbjct: 161 --IFILFLLLLALAVFLYLFIRGWDP--NSIFKALLRALIVLVIVVPPALPAAVTVALAV 216
Query: 461 SLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKV 520
LA++GI + GKVD C DKTGTLT + M +GV E
Sbjct: 217 GDARLAKKGILVRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDGGKEDNSSS--- 273
Query: 521 PVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRH 580
+ +N L GDP+EKA LK + K+D G +I+
Sbjct: 274 ------------LVACDNNYLSGDPMEKALLKSAELVGKAD-------KGNKEYKILDVF 314
Query: 581 HFASHLKRMSVVVRVQEE-FFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALA 639
F+S LKRMSV+V + FVKGAPE I +R + Y E Y + QG RVLA A
Sbjct: 315 PFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERCNN----YEEKYLELARQGLRVLAFA 370
Query: 640 FKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGD 699
K L D L F G F P+R D+ + + ELK + + MITGD
Sbjct: 371 SKELED----------------DLEFLGLITFEDPLRPDAKETIEELKAAGIKVVMITGD 414
Query: 700 QALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCI 759
LTA +A ++ I V+ VSP+
Sbjct: 415 NVLTAKAIAKELGI--------------DVFARVSPE----------------------- 437
Query: 760 GGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALK 819
QK I+ + G + M GDG ND ALK
Sbjct: 438 ------------------------------QKLQIVEALQKKGHIVAMTGDGVNDAPALK 467
Query: 820 QAHVGVALL 828
+A VG+A+
Sbjct: 468 KADVGIAMG 476
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 395 bits (1016), Expect = e-124
Identities = 171/685 (24%), Positives = 271/685 (39%), Gaps = 117/685 (17%)
Query: 188 PTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFM------FESTMAKSRL 241
F L+ + FV G L + + + + + A L
Sbjct: 80 DPFIILLLVAALLSAFVGDWVDAG-----VDAIVILLVVVINALLGFVQEYRAEKALEAL 134
Query: 242 KTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLIL 301
K ++ + V R GK+V++ ++LVPGD+V + +G VPAD+ +L
Sbjct: 135 KKMS--------SPKAKVLRDGKFVEIPASELVPGDIVLL--EAGDV-----VPADLRLL 179
Query: 302 GGSA-IVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPL 360
S V+E+ LTGES P K ++ T D+ ++LF GT ++
Sbjct: 180 ESSDLEVDESALTGESLPVEKQALP--LTKSDAPLGLDRDNMLFSGTTVVS--------- 228
Query: 361 KTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVL 420
G +V+ TGFET GK+ R + E T + FL+V A++ V
Sbjct: 229 ----GRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVF 284
Query: 421 KKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 480
G+ + FL+ + + +P LP ++IA+ +A+ I
Sbjct: 285 VVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIET 344
Query: 481 AGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEI-----LASCH--A 533
G VD+ C DKTGTLT + M + + + + D + + A C+
Sbjct: 345 LGSVDVICSDKTGTLTQNKMTVKKIYINGGGK-DIDDKDLKDSPALLRFLLAAALCNSVT 403
Query: 534 LVFVDNKLVGDPLEKAALKGIDWS-YKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVV 592
GDP E A ++ + + D + I+ F S KRMSV+
Sbjct: 404 PEKNGWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEY-----PILAEIPFDSERKRMSVI 458
Query: 593 VRV-QEEFFAFVKGAPETIQDRLT----------DLPSSYIETYKKYTHQGSRVLALAFK 641
V+ + ++ FVKGAPE I +R + + E K+ +G RVLA+A+K
Sbjct: 459 VKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYK 518
Query: 642 SLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQA 701
L D DE+E+ L F G P RED + + EL+ + + MITGD
Sbjct: 519 KLDRAEKDD----EVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHV 574
Query: 702 LTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGG 761
TA +A + I + L I G
Sbjct: 575 ETAIAIAKECGIEAE------------------------------------AESALVIDG 598
Query: 762 DCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQA 821
+ L + ++ + VFARV+PEQK I+ + G + M GDG ND ALK A
Sbjct: 599 AELDALSD-EELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAA 657
Query: 822 HVGVALLNAVPPTQSGNSSSEASKD 846
VG+A+ G ++A+K+
Sbjct: 658 DVGIAM---------GGEGTDAAKE 673
|
Length = 917 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 141 bits (358), Expect = 1e-34
Identities = 158/703 (22%), Positives = 265/703 (37%), Gaps = 144/703 (20%)
Query: 167 TEAKIAVATEKWGRN--VFEYPQPTFQKLMKENCM-EPFFVFQVFCVGLWCLDEYWYYSL 223
T ++ ++G N V E P + L++ PF +G+ L + ++
Sbjct: 35 TNVEVTERLAEFGPNQTVEEKKVPNLRLLIR--AFNNPFIYILAMLMGVSYLTDDLEATV 92
Query: 224 FTLFMLFM---------FESTMAKSRLKTLTEIRR--VRVDNQTIMVHRCGKWVKLAGTD 272
M+ + A LK + + +RV N+ G ++
Sbjct: 93 IIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGN----GSMDEVPIDA 148
Query: 273 LVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAI-VNEAILTGESTPQWKVSIMGRETGE 331
LVPGD++ + ++G +PAD ++ + +N++ LTGES P K R
Sbjct: 149 LVPGDLIEL--AAGDI-----IPADARVISARDLFINQSALTGESLPVEKFVEDKRARDP 201
Query: 332 KLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFST 391
++ ++ ++ F GT +L G AVVL TG T G L T
Sbjct: 202 EI---LERENLCFMGTNVLS-------------GHAQAVVLATGSSTWFGSLAIAA---T 242
Query: 392 ERVTANSWESGL---------FILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLII 442
ER +++ G+ F+L +V ++ G + KG + FL +
Sbjct: 243 ERRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLM--KG------DWLEAFLFALAVA 294
Query: 443 TSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEF 502
+ P LPM +S + I ++++ + E I G +D+ C DKTGTLT D
Sbjct: 295 VGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQD---- 350
Query: 503 RGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDE 562
ELE + ++ +L L + L+ A L +D E
Sbjct: 351 -------KIELEKHIDSSGETSERVL-KMAWLNSYFQTGWKNVLDHAVLAKLD------E 396
Query: 563 KAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFV-KGAPETI---------QD 612
A + + V F +R+SVVV + E + KGA E +
Sbjct: 397 SAARQTASR--WKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGG 454
Query: 613 RLTDLPSSYIETYKK----YTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGF 668
+ L S + QG RV+A+A K+L V +A DE + L GF
Sbjct: 455 AVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLK---VGEADFTKTDEEQ--LIIEGF 509
Query: 669 AVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGK 728
F P +E + + ++ L + ++ ++TGD + + +V I
Sbjct: 510 LGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGI--------------- 554
Query: 729 VYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAP 788
DA+D +G D E+ + R + +FAR+ P
Sbjct: 555 ------------------------DANDFLLGADIEEL--SDEELARELRKYHIFARLTP 588
Query: 789 EQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAV 831
QK I+ K G GDG ND AL++A VG+++ A
Sbjct: 589 MQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAA 631
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 132 bits (333), Expect = 2e-31
Identities = 163/649 (25%), Positives = 256/649 (39%), Gaps = 148/649 (22%)
Query: 258 MVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAI-VNEAILTGES 316
V R G+W + DLVPGD+V + DK VPAD+ +L + V+++ILTGES
Sbjct: 76 KVLRDGRWSVIKAKDLVPGDIVELAVG------DK-VPADIRVLSLKTLRVDQSILTGES 128
Query: 317 TPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGF 376
K + ++ + +DK ++LF GT ++ G VV+RTG
Sbjct: 129 VSVNKHT---ESVPDERAVNQDKKNMLFSGTLVV-------------AGKARGVVVRTGM 172
Query: 377 ETSQGKLMRTILFSTERVTANSWE--------SGLFILFLVVFAVIAAGY----VLKKGM 424
T GK+ + + + T + S + L ++ VI G+ L G
Sbjct: 173 STEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGW 232
Query: 425 EDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIAL-ARR-----GIFCTEPFRI 478
+K+ ++ ++ + IP LP AV T+ +AL R+ I P +
Sbjct: 233 IQGAIYYFKIAVALAV---AAIPEGLP-----AVITTCLALGTRKMAKKNAIVRKLP-SV 283
Query: 479 PFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELE------DDMT-----------KVP 521
G + C DKTGTLT++ M VV L + T
Sbjct: 284 ETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPV 343
Query: 522 VRTQ----EILASCHAL-----VFVDNKL-----VGDPLEKAALKGI-------DWSYKS 560
Q E LA+ AL + + + VG+ E AALK +
Sbjct: 344 AGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATE-AALKVLVEKMGLPATKNGV 402
Query: 561 DEKAMPKRGGGNAVQIVQRH----HFASHLKRMSVVVRVQEEFFAFVKGAPETIQDR--- 613
K P G + + F+ K MSV+ + FVKGAPE + +R
Sbjct: 403 SSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPSTGNKLFVKGAPEGVLERCTH 462
Query: 614 ----------LTDLPSSYIETYKKY--THQGSRVLALAFKSLPDMTVSD--ARSLHRDEV 659
LTD + I + K T + R LALAFK +PD D + + + +
Sbjct: 463 ILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAI 522
Query: 660 ENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVL 719
E+ LTF G P R + A + + + + + MITGD TA + ++ I
Sbjct: 523 ESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIF----- 577
Query: 720 ILCPVKNGKVYEWVSPDE-TEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIP 778
SPDE ++ +E + + A +Q +A +
Sbjct: 578 --------------SPDEDVTFKSFTGREFDEMGPA-------------KQRAACRSAV- 609
Query: 779 YVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVAL 827
+F+RV P K ++ + G + M GDG ND ALK+A +G+A+
Sbjct: 610 ---LFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAM 655
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 2e-27
Identities = 135/580 (23%), Positives = 210/580 (36%), Gaps = 122/580 (21%)
Query: 259 VHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAI-VNEAILTGEST 317
V R GKW ++ ++LVPGDVV + G VPAD + G I V++A LTGES
Sbjct: 96 VLRDGKWQEIPASELVPGDVVRLK--IGDI-----VPADCRLFEGDYIQVDQAALTGESL 148
Query: 318 PQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFE 377
P + + + G+ + Q G AVV TG
Sbjct: 149 P----------------VTKKTGDIAYSGSTVKQ-------------GEAEAVVTATGMN 179
Query: 378 TSQGKLMRTILFSTERVTANSWESGLFI-LFLVVFAVIAAGYVLKKGMEDPTRSKYKLFL 436
T GK + STE + + + I LFL+V + L ++ L
Sbjct: 180 TFFGKAAALVQ-STETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLF-FGRGESFREGL 237
Query: 437 SCSLIITSV-IPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTL 495
+L++ IP +P LS+ + LA++ T I +D+ C DKTGTL
Sbjct: 238 QFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTL 297
Query: 496 TSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGID 555
T + + ++ N +DD+ +L + A D D ++ A L
Sbjct: 298 TLNKLSIDEILPFFNGFDKDDV---------LLYAALASREEDQ----DAIDTAVLG--- 341
Query: 556 WSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQE--EFFAFVKGAPETIQDR 613
S K ++A + ++++ F KR V E + F KGAP+ I D
Sbjct: 342 -SAKDLKEAR------DGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDL 394
Query: 614 LTD---LPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAV 670
+ + E + +G R L +A E F G
Sbjct: 395 CDNKKEIEEKVEEKVDELASRGYRALGVARTD----------------EEGRWHFLGLLP 438
Query: 671 FNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVY 730
P R D+ + + ++ ++ M+TGD A A ++ + + V
Sbjct: 439 LFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGL--GTNIYTADVLLKGDN 496
Query: 731 EWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQ 790
P ++ VE G FA V PE
Sbjct: 497 RDDLPSGLGEM------VED-------ADG----------------------FAEVFPEH 521
Query: 791 KELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNA 830
K I+ + G + M GDG ND ALK+A VG+A+ A
Sbjct: 522 KYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGA 561
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 119 bits (299), Expect = 3e-27
Identities = 144/625 (23%), Positives = 222/625 (35%), Gaps = 145/625 (23%)
Query: 254 NQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPAD-MLILGGSAIVNEAIL 312
Q I V R G+ +++ D+V GD+VS+ TG+ VPAD + I G S ++E+ +
Sbjct: 166 AQKIAVIRGGQEQQISIHDIVVGDIVSL-----STGD--VVPADGVFISGLSLEIDESSI 218
Query: 313 TGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVL 372
TGES P K + L GT + + G +V
Sbjct: 219 TGESDPIKK--------------GPVQDPFLLSGTVVNE-------------GSGRMLVT 251
Query: 373 RTGFETSQGKLMRTILFSTE----------RVTANSWESGL---FILFLVVFAVIAAGYV 419
G + GKLM + + E + + G+ +LFLV+ YV
Sbjct: 252 AVGVNSFGGKLMMELRQAGEDSTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLR----YV 307
Query: 420 LKKGMEDPTRSKY------KLFLSCSLIITSVIPPELPMELSIAVNTSLI------ALAR 467
+ D ++ F+ I+ +P LP+ ++IA+ S+ L R
Sbjct: 308 FRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVR 367
Query: 468 RGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEF-RGVVGLSNAELEDDMTKVPVRTQE 526
C G C DKTGTLT + M +G +G + D + VP +
Sbjct: 368 HLAACET------MGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRN 421
Query: 527 ILASCHAL-----VFVDNK----LVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIV 577
IL +L VD +G E A L D+ R V+I
Sbjct: 422 ILVEGISLNSSSEEVVDRGGKRAFIGSKTECALL---DFGLLLLRDYQEVRAEEKVVKIY 478
Query: 578 QRHHFASHLKRMSVVVRVQE-EFFAFVKGAPE--------------TIQDRLTDLPSSYI 622
F S K MSVVV+ ++ F KGA E D
Sbjct: 479 P---FNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRCA 535
Query: 623 ETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKI 682
+ + R + LA++ D GLT G P+R +
Sbjct: 536 DVIEPLASDALRTICLAYRDFAPEEFPRK-----DYPNKGLTLIGVVGIKDPLRPGVREA 590
Query: 683 LSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQ 742
+ E + + + M+TGD TA +A I+T
Sbjct: 591 VQECQRAGITVRMVTGDNIDTAKAIARNCGILT-------------------FGG----- 626
Query: 743 YSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVG 802
L + G F L + ++P ++V AR +P K+L++ K +G
Sbjct: 627 --------------LAMEGKEFRSLVY-EEMDPILPKLRVLARSSPLDKQLLVLMLKDMG 671
Query: 803 RMTLMCGDGTNDVGALKQAHVGVAL 827
+ + GDGTND ALK A VG ++
Sbjct: 672 EVVAVTGDGTNDAPALKLADVGFSM 696
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 1e-26
Identities = 138/611 (22%), Positives = 225/611 (36%), Gaps = 135/611 (22%)
Query: 261 RCGKWVKLAGTDLVPGDVV--SIGRSSGQTGEDKSVPADMLILGGSAI-VNEAILTGEST 317
R GK + + LVPGD+V S+G D+ VPAD+ I+ + ++E+ LTGE+T
Sbjct: 123 REGKLEHVLASTLVPGDLVCLSVG--------DR-VPADLRIVEAVDLSIDESNLTGETT 173
Query: 318 PQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFE 377
P KV+ ++S++ F GT + G +V+ TG
Sbjct: 174 PVSKVT--APIPAATNGDLAERSNIAFMGTLV-------------RCGHGKGIVVGTGSN 218
Query: 378 TSQGKLMRTILFSTERVT--ANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLF 435
T G + + + + T S + L LV F VI G + G + ++F
Sbjct: 219 TEFGAVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVI--GVICLVGWFQ-GKDWLEMF 275
Query: 436 -LSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGT 494
+S SL + + IP LP+ +++ + ++ ++++ + + G V++ C DKTGT
Sbjct: 276 TISVSLAVAA-IPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGT 334
Query: 495 LTSDDM-------------EFRGVVGLSNAELEDDMTKVPV-------RTQEILASCHAL 534
LT + M V E+ D + R E C+
Sbjct: 335 LTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNA 394
Query: 535 VFVDNK--LVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVV 592
F + L+G+P + A ++ + + V F+S K M+V
Sbjct: 395 KFRNEADTLLGNPTDVALIE------LLMKFGLD--DLRETYIRVAEVPFSSERKWMAVK 446
Query: 593 V--RVQEEFFAFVKGAPETI-------------QDRLTD-LPSSYIETYKKYTHQGSRVL 636
R F+KGA E + LT E + G RV+
Sbjct: 447 CVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVI 506
Query: 637 ALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMI 696
A A + LTF G N P R + ++ L + MI
Sbjct: 507 AFASGPE----------------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMI 550
Query: 697 TGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHD 756
TGD TA +A ++ + +K + + + L+
Sbjct: 551 TGDSQETAVSIARRLGMPSKT-----------------SQSVSGEKLDAMDDQQLSQ--- 590
Query: 757 LCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVG 816
++P V VFAR +PE K I+ + G + M GDG ND
Sbjct: 591 -------------------IVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAP 631
Query: 817 ALKQAHVGVAL 827
ALK A +GVA+
Sbjct: 632 ALKLADIGVAM 642
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 7e-26
Identities = 170/641 (26%), Positives = 247/641 (38%), Gaps = 163/641 (25%)
Query: 234 STMAKSRLKTLTEIRRVRVDNQTIMVHRCG------KWVKLAGTDLVPGDVVSIGRSSGQ 287
ST A LK + V N T V R W+++ LVPGD++ + ++G
Sbjct: 146 STKAADALKAM-------VSN-TATVLRVINDKGENGWLEIPIDQLVPGDIIKL--AAGD 195
Query: 288 TGEDKSVPADMLILGGSA---IVNEAILTGESTPQWKVS-IMGRETGEKLSARRDKSHVL 343
+PAD+ IL A V +A LTGES P K + E L + +
Sbjct: 196 M-----IPADLRIL--QARDLFVAQASLTGESLPVEKFATTRQPEHSNPL----ECDTLC 244
Query: 344 FGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWE--- 400
F GT ++ G AVV+ TG T G+L RV+ E
Sbjct: 245 FMGTNVVS-------------GTAQAVVIATGANTWFGQL-------AGRVSEQDSEPNA 284
Query: 401 --------SGLFILFLVVFAVIAA---GYVLKKGMEDPTRSKYKLF-LSCSLIITSVIPP 448
S L I F++V A + GY KG D + LF LS ++ +T P
Sbjct: 285 FQQGISRVSWLLIRFMLVMAPVVLLINGYT--KG--DWWEAA--LFALSVAVGLT---PE 335
Query: 449 ELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGL 508
LPM ++ + + L+++ + I G +D+ C DKTGTLT D + +
Sbjct: 336 MLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDI 395
Query: 509 SNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKR 568
S E V L S H + N L+ A L+G+D +E A
Sbjct: 396 SGKTSER------VLHSAWLNS-HYQTGLKNL-----LDTAVLEGVD-----EESARSL- 437
Query: 569 GGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFV-KGAPETI---------QDRLTDLP 618
+ Q + F +RMSVVV E + KGA E I + L
Sbjct: 438 --ASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLD 495
Query: 619 SSYIETYKKYTH----QGSRVLALAFKSLP----DMTVSDARSLHRDEVENGLTFAGFAV 670
+ K+ T QG RV+A+A K LP D +D E+ L G+
Sbjct: 496 DIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRAD---------ESDLILEGYIA 546
Query: 671 FNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVY 730
F P +E +A L LK S + ++TGD L A V +V + VLI
Sbjct: 547 FLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAGEVLI---------- 596
Query: 731 EWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQ 790
++E L+D + + R +FAR+ P
Sbjct: 597 --------------GSDIETLSDD-------------ELANLAER----TTLFARLTPMH 625
Query: 791 KELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAV 831
KE I+T K G + GDG ND AL+ A +G+++ AV
Sbjct: 626 KERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAV 666
|
Length = 902 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 8e-25
Identities = 56/239 (23%), Positives = 88/239 (36%), Gaps = 50/239 (20%)
Query: 240 RLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADML 299
LK L V R GK ++ +LV GD+V + + G+ VPAD
Sbjct: 26 ALKKLLPPTAATVI-------RDGKEEEIPADELVVGDIVLL-----KPGD--RVPADGR 71
Query: 300 ILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFP 359
I+ GS V+E+ LTGES P K + +F GT +L
Sbjct: 72 IIEGSLEVDESALTGESLPVEK----------------SRGDTVFAGTVVL--------- 106
Query: 360 LKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYV 419
G +V TG +T GK+ R + + T LV + A V
Sbjct: 107 ----SGELKVIVTATGEDTELGKIARLVEEAKSAKTPLQRLLDKLAKILVPIVLALAILV 162
Query: 420 LKKGM---EDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEP 475
D + L + ++++ + P LP+ + +A+ LA++GI
Sbjct: 163 FLIWFFRGGDFLEA---LLRALAVLVAA-CPEALPLAVPLALAVGAGRLAKKGILVKNL 217
|
Length = 222 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 98.2 bits (245), Expect = 8e-21
Identities = 168/782 (21%), Positives = 276/782 (35%), Gaps = 215/782 (27%)
Query: 221 YSLFTLFM--LFMFESTMAKSRLKTLTEIRRVRVDNQ-----TIMVHRCGKWVKLAGTDL 273
T + F+ T K + + +IRR R D + T ++ G++V++ DL
Sbjct: 48 TYRGTSIVPLAFVLIVTAIK---EAIEDIRRRRRDKEVNNRLTEVLEGHGQFVEIPWKDL 104
Query: 274 VPGDVVSIGRSSGQTGEDKSVPADMLILG-----GSAIVNEAILTGESTPQWKVSIMGRE 328
GD+V + + D+ +PAD+L+L G V A L GE+ K+ E
Sbjct: 105 RVGDIVKVKK-------DERIPADLLLLSSSEPDGVCYVETANLDGET--NLKLRQALEE 155
Query: 329 TGEKLSARRDK------------SHVL-FGGTKILQHTPDKTFPLKTPD----------- 364
T + L K + + F G + D+ +PL +PD
Sbjct: 156 TQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTING--DRQYPL-SPDNILLRGCTLRN 212
Query: 365 -GGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGL--------FILFLVVFA--- 412
+ VV+ TG +T KLMR A S S L ILF ++F
Sbjct: 213 TDWVIGVVVYTGHDT---KLMRN------ATQAPSKRSRLEKELNFLIIILFCLLFVLCL 263
Query: 413 --VIAAGYVLKKGMED---------PTRSKYKLFLS--CSLIITSVIPPELPMELSIAVN 459
+ AG +D + F S LI+ S + P +S+ V+
Sbjct: 264 ISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIP-----ISLYVS 318
Query: 460 TSLIALARRGIFCTEPFRI-------PFA----------GKVDMCCFDKTGTLTSDDMEF 502
L+ + F ++ P + G+V+ DKTGTLT + MEF
Sbjct: 319 LELVKSVQ-AYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEF 377
Query: 503 R-----GV----------------VGLSNAELED--------------------DMTKVP 521
+ GV +G
Sbjct: 378 KKCSIAGVSYGDGFTEIKDGIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNA 437
Query: 522 VRTQEI---LASCHALV--FVDNKLVG------DPLEKAALKG--------IDWSYKSDE 562
R E LA CH +V F D+ P E A +K + + KS
Sbjct: 438 KRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSIS 497
Query: 563 KAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQE-EFFAFVKGAPETIQDRLTDLPSSY 621
+ G +I+ F S KRMSV+VR + KGA I RL+ +
Sbjct: 498 LLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQV 557
Query: 622 IETYKKYTHQ----GSRVLALAFKSLPDMTVSD--------ARSLHRDE---------VE 660
E K++ G R L +A++ L + + + +L E +E
Sbjct: 558 NEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIE 617
Query: 661 NGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLI 720
L G ++E + + L+ + + ++TGD+ TA + ++++ +
Sbjct: 618 KDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQ 677
Query: 721 LCPVKNGKV-YEWVSPDETEKIQYSEKEVEGLTDAHDLC--IGGDC----------FEML 767
+ + V ++ + +E L D+ ++ I G E L
Sbjct: 678 IVITSDSLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFL 737
Query: 768 Q---QTSAVLRVIPYVKVFARVAPEQKELILTTFK-AVGRMTLMCGDGTNDVGALKQAHV 823
Q + AV + RV+P QK ++ K + G+ TL GDG NDV +++A V
Sbjct: 738 QLALKCKAV--------ICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADV 789
Query: 824 GV 825
GV
Sbjct: 790 GV 791
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 92.4 bits (229), Expect = 5e-19
Identities = 157/747 (21%), Positives = 265/747 (35%), Gaps = 215/747 (28%)
Query: 242 KTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADM-LI 300
KT+ ++ + ++ R GK + DLVPGD+ + +TG+ ++PAD+ LI
Sbjct: 107 KTMDSLKNLASPMAHVI--RNGKSDAIDSHDLVPGDICLL-----KTGD--TIPADLRLI 157
Query: 301 LGGSAIVNEAILTGESTPQWK----VSIMGRET--GEKLSARRDKSHVLFGGTKILQHTP 354
+ +EA+LTGES P K +T G++++ S V G K
Sbjct: 158 ETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAK------ 211
Query: 355 DKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTI-----LFS-------TERVTANSWESG 402
+ + T + G + + LF +R N W
Sbjct: 212 --------------GICIATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILK 257
Query: 403 L-------------------------FILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLS 437
+ ILF + A+I A V+ D + +
Sbjct: 258 VTKKVTGAFLGLNVGTPLHRKLSKLAVILFCI--AIIFAIIVMAAHKFDVDKEVAIYAIC 315
Query: 438 CSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTS 497
++ S+IP L LSI + +++R + + + G V+ C DKTGT+T
Sbjct: 316 LAI---SIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQ 372
Query: 498 DDMEFR-------GVVGLSNA----------------------------------ELEDD 516
M R G + + N+ E +D+
Sbjct: 373 GKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDE 432
Query: 517 MTKVPVRT-------QEILASCH----ALVFVDN-----KLVGDPLEKA----------- 549
+ ++ + ++L + A VF D+ K GDP E A
Sbjct: 433 LKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLP 492
Query: 550 --ALKGIDWSYKSDEKAMP------KRGGGNAVQIVQRHHFASHLKRMSVVVRVQ--EEF 599
AL G + KS+E ++ G + + F S +KRM+ + E +
Sbjct: 493 HNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETY 552
Query: 600 FAFVKGAPETIQDR-----------LTDLPSSYIETYKK----YTHQGSRVLALAFKSLP 644
+ KGA E I + ++ L E +G RVLA A KS
Sbjct: 553 NIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFD 612
Query: 645 DMTVSDAR----SLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQ 700
+D + +L+R E+ L F G P R +SA + + + ++ M+TGD
Sbjct: 613 KADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDF 672
Query: 701 ALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIG 760
TA +A +V I+ I ++ ++ + +
Sbjct: 673 PETAKAIAQEVGIIP----------------------PNFIHDRDEIMDSMV------MT 704
Query: 761 GDCFEMLQQTSA-VLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALK 819
G F+ L L+ + V AR AP+ K ++ M GDG ND +LK
Sbjct: 705 GSQFDALSDEEVDDLKALCL--VIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLK 762
Query: 820 QAHVGVALLNAVPPTQSGNSSSEASKD 846
A+VG+A+ G + S+ +KD
Sbjct: 763 MANVGIAM---------GINGSDVAKD 780
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 72.9 bits (179), Expect = 5e-13
Identities = 145/645 (22%), Positives = 245/645 (37%), Gaps = 122/645 (18%)
Query: 255 QTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAI-VNEAILT 313
Q +V R G+ + + +V GD+V + G D+ +PAD+ I+ V+ + LT
Sbjct: 141 QQALVIRDGEKMSINAEQVVVGDLVEV------KGGDR-IPADLRIISAQGCKVDNSSLT 193
Query: 314 GESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVV-- 371
GES PQ + E L R ++ F T ++ T + + T D + +
Sbjct: 194 GESEPQTRSPEFTHEN--PLETR----NIAFFSTNCVEGTA-RGIVVNTGDRTVMGRIAS 246
Query: 372 LRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAA--GYVLKKGMEDPTR 429
L +G E + + I +T G+ + V F +++ GY + +
Sbjct: 247 LASGLENGKTPIAIEIEHFIHIIT------GVAVFLGVSFFILSLILGYTWLEAV----- 295
Query: 430 SKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCF 489
+FL II + +P L +++ + + +AR+ + G C
Sbjct: 296 ----IFLIG--IIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICS 349
Query: 490 DKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQ------------EILASCHALVFV 537
DKTGTLT + M + N E D T+ I C+ VF
Sbjct: 350 DKTGTLTQNRMTV-AHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFK 408
Query: 538 DNK---------LVGDPLEKAALKGIDWSYKSDEKAMPKR---------GGGNAVQIVQR 579
+ + GD E A LK I+ M +R N Q+
Sbjct: 409 AGQENVPILKRAVAGDASESALLKCIELCL-GSVMEMRERNPKVVEIPFNSTNKYQLSIH 467
Query: 580 HHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLTD---------LPSSYIETYKKYTH 630
+ R +V+ KGAPE I +R + L E ++
Sbjct: 468 ENEDPRDPRHLLVM----------KGAPERILERCSSILIHGKEQPLDEELKEAFQNAYL 517
Query: 631 Q----GSRVLALAFKSLPDMTVSDARSLHRDEVE---NGLTFAGFAVFNCPIREDSAKIL 683
+ G RVL LPD + D+V + L F G P R +
Sbjct: 518 ELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAV 577
Query: 684 SELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQY 743
+ +++ + M+TGD +TA +A V I+++ N V + + Q
Sbjct: 578 GKCRSAGIKVIMVTGDHPITAKAIAKGVGIISE--------GNETVEDIAARLNIPVSQV 629
Query: 744 SEKEVEGLTDAHDLCI--GGDCFEML-QQTSAVLRVIPYVKVFARVAPEQKELILTTFKA 800
+ ++ + C+ G D +M +Q +L+ + VFAR +P+QK +I+ +
Sbjct: 630 NPRDAKA-------CVVHGSDLKDMTSEQLDEILKYHTEI-VFARTSPQQKLIIVEGCQR 681
Query: 801 VGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASK 845
G + + GDG ND ALK+A +GVA+ G + S+ SK
Sbjct: 682 QGAIVAVTGDGVNDSPALKKADIGVAM---------GIAGSDVSK 717
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 72.2 bits (178), Expect = 6e-13
Identities = 80/338 (23%), Positives = 129/338 (38%), Gaps = 105/338 (31%)
Query: 219 WYYSLF-TLFMLFMFESTM------------AKSRLKTLTEIR----------RVRVDNQ 255
+ YSL+ TLF ++ E+ M A+++ + IR V +
Sbjct: 161 YAYSLYATLFPVYFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGD- 219
Query: 256 TIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGE 315
G+ ++ ++ GD+V + + GE +P D +++ GS+ V+E++LTGE
Sbjct: 220 -------GEEEEVPVEEVQVGDIVLV-----RPGE--RIPVDGVVVSGSSSVDESMLTGE 265
Query: 316 STPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTG 375
S P K + G++ +F GT L DG V R G
Sbjct: 266 SLPVEK------KPGDE----------VFAGTVNL-------------DGSLTIRVTRVG 296
Query: 376 FET-----------SQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGM 424
+T +Q + +RV + F+ ++V A + G
Sbjct: 297 ADTTLARIIRLVEEAQSSKAPIQRLA-DRV------ASYFVPVVLVIAALTFALWPLFGG 349
Query: 425 EDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIA----LARRGIFCTEPFR--- 477
D + Y+ L+ L+I P L +A T+++ ARRGI +
Sbjct: 350 GDWETALYR-ALAV-LVIAC------PCALGLATPTAILVGIGRAARRGIL----IKGGE 397
Query: 478 -IPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELE 514
+ KVD FDKTGTLT E VV L E E
Sbjct: 398 ALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDGDEDE 435
|
Length = 713 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 65.8 bits (161), Expect = 6e-11
Identities = 61/253 (24%), Positives = 99/253 (39%), Gaps = 58/253 (22%)
Query: 587 KRMSVVV-RVQEEFFAFVKGAPE-------TIQDRLTDLP------SSYIETYKKYTHQG 632
+R+SVVV Q + KGA E ++D T P + + Y G
Sbjct: 452 RRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADG 511
Query: 633 SRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQD 692
RVL +A + +P ++R+ + E L GF F P +E +A ++ L+ +
Sbjct: 512 FRVLLVATREIPG---GESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVA 568
Query: 693 LAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752
+ ++TGD + + +V + +P L E+E +
Sbjct: 569 VKVLTGDNPIVTAKICREVGL--EPGEPLL----------------------GTEIEAMD 604
Query: 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGT 812
DA A+ R + VFA++ P QK +L +A G GDG
Sbjct: 605 DA-----------------ALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGI 647
Query: 813 NDVGALKQAHVGV 825
ND AL+ A VG+
Sbjct: 648 NDAPALRDADVGI 660
|
Length = 903 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 62.6 bits (153), Expect = 4e-10
Identities = 62/324 (19%), Positives = 117/324 (36%), Gaps = 72/324 (22%)
Query: 210 VGLWCLDEYW-YYSLFTLFMLFMFESTMAKSR----LKTL-----TEIRRVRVDNQTIMV 259
+ + + L LF+L AK R L L + R ++ D
Sbjct: 10 IAAYAMGLVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSE--- 66
Query: 260 HRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQ 319
++ +L GD+V + GE +P D +++ G + V+E+ LTGES P
Sbjct: 67 ------EEVPVEELQVGDIVIVR-----PGE--RIPVDGVVISGESEVDESALTGESMPV 113
Query: 320 WKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETS 379
K + G+++ F GT DG V + G +++
Sbjct: 114 EK------KEGDEV----------FAGTING-------------DGSLTIRVTKLGEDST 144
Query: 380 QGKLMRTILFSTERVT-----ANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKL 434
+++ + + A+ S L + + ++ + R+ L
Sbjct: 145 LAQIVELVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGALGALYRALAVL 204
Query: 435 FLS--CSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKT 492
++ C+L + + +A+ ++ ARRGI + KV FDKT
Sbjct: 205 VVACPCALGLAT----------PVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKT 254
Query: 493 GTLTSDDMEFRGVVGLSNAELEDD 516
GTLT+ + L +A + ++
Sbjct: 255 GTLTTGKPTVVDIEPLDDASISEE 278
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 63.1 bits (154), Expect = 5e-10
Identities = 82/287 (28%), Positives = 123/287 (42%), Gaps = 56/287 (19%)
Query: 232 FESTMAKSRLK-----TLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSG 286
F S A LK T T +RR + + ++ +LVPGD+V + S+G
Sbjct: 133 FRSNKAAEALKAMVRTTATVLRRGHAGAEPVRR-------EIPMRELVPGDIVHL--SAG 183
Query: 287 QTGEDKSVPADM-LILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVL-- 343
+PAD+ LI +++A+LTGE+ P K +G G+ A D L
Sbjct: 184 DM-----IPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLD 238
Query: 344 -----FGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTER----- 393
F GT ++ G AVV+ TG T G L ++I+ + +
Sbjct: 239 LPNICFMGTNVVS-------------GTATAVVVATGSRTYFGSLAKSIVGTRAQTAFDR 285
Query: 394 -VTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPE-LP 451
V + SW L I F++V + +L G + LF +L + + PE LP
Sbjct: 286 GVNSVSW---LLIRFMLVMVPVV---LLINGFTKGDWLEALLF---ALAVAVGLTPEMLP 336
Query: 452 MELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSD 498
M +S + IA+ARR + I G +D+ C DKTGTLT D
Sbjct: 337 MIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQD 383
|
Length = 903 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 61.6 bits (150), Expect = 1e-09
Identities = 71/304 (23%), Positives = 117/304 (38%), Gaps = 72/304 (23%)
Query: 210 VGLWCLDEYWYYSLFTLFMLF-----MFESTMAKSRLKTLTEIRRVRVDNQTIMVHRCGK 264
+G + EY +L L + S A+ LK L E+ T V R G
Sbjct: 10 LGAVAIGEYLEGALLLLLFSIGETLEEYASGRARRALKALMELAP-----DTARVLRGGS 64
Query: 265 WVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSI 324
++A +L GDVV + GE VP D ++L G++ V+E+ LTGES P V
Sbjct: 65 LEEVAVEELKVGDVVVVK-----PGE--RVPVDGVVLSGTSTVDESALTGESVP---VE- 113
Query: 325 MGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLM 384
+ G+++ F G D + V + +++ K
Sbjct: 114 --KAPGDEV----------FAGA----INLDGVLTIV---------VTKLPADSTIAK-- 146
Query: 385 RTILFSTERVTANSWESGLFI------LFLVVFAVIAAGYVLKKGMEDPTRSKYK--LFL 436
I+ E + ++ FI VV A+ A +++ ++ Y+ + L
Sbjct: 147 --IVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKRWPFWVYRALVLL 204
Query: 437 ----SCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKT 492
C+L+I++ A +++ A AR GI + K+ FDKT
Sbjct: 205 VVASPCALVISA----------PAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKT 254
Query: 493 GTLT 496
GTLT
Sbjct: 255 GTLT 258
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 60.0 bits (146), Expect = 3e-09
Identities = 63/328 (19%), Positives = 112/328 (34%), Gaps = 68/328 (20%)
Query: 202 FFVFQVFCVGLWCLDEYWYYSLFTLFMLFM---FESTMAKSRLKTLTEIRRVR--VDNQT 256
V ++ + L + + +AK R + ++ +
Sbjct: 36 LVALLANQVLTGLHVHTFFDASAMLITFILLGRWLEMLAKGR--ASDALSKLAKLQPSTA 93
Query: 257 IMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGES 316
++ G+ ++ L PGD+V + GE +P D ++ G + V+E+++TGES
Sbjct: 94 TLLTDDGEIEEVPVELLQPGDIVRV-----LPGE--KIPVDGTVIEGESEVDESLVTGES 146
Query: 317 TPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGF 376
P K + G + GT + T + LA ++R
Sbjct: 147 LPVPK------KVG----------DPVIAGT-VNGTGSLVVRATATGEDTTLAQIVRLVR 189
Query: 377 ETSQGK--LMRT----------ILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGM 424
+ Q K + R ++ + +T W L + VFA+ A V
Sbjct: 190 QAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIW---LILGADFVFALEVAVTV----- 241
Query: 425 EDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKV 484
L ++C + P IAV T L A+ G+ + + A +
Sbjct: 242 ---------LIIACPCALGLATP------TVIAVATGL--AAKNGVLIKDGDALERAANI 284
Query: 485 DMCCFDKTGTLTSDDMEFRGVVGLSNAE 512
D FDKTGTLT V ++
Sbjct: 285 DTVVFDKTGTLTQGKPTVTDVHVFGESD 312
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 54.9 bits (133), Expect = 1e-07
Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 760 GGDCFEML-----QQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTND 814
GG ML AV + +V A + PE K I+ + G + M GDG ND
Sbjct: 400 GGIKLVMLTGDNRSAAEAVAAELGIDEVHAELLPEDKLAIVKELQEEGGVVAMVGDGIND 459
Query: 815 VGALKQAHVGVAL 827
AL A VG+A+
Sbjct: 460 APALAAADVGIAM 472
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 54.1 bits (131), Expect = 3e-07
Identities = 21/45 (46%), Positives = 25/45 (55%)
Query: 782 VFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVA 826
V A + PE K I+ +A GR M GDG ND AL A VG+A
Sbjct: 579 VRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIA 623
|
Length = 713 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 51.9 bits (125), Expect = 1e-06
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 781 KVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVAL 827
V A V P+ K ++ + G++ M GDG ND AL QA VG+A+
Sbjct: 455 NVRAEVLPDDKAALIKKLQEKGKVVAMVGDGINDAPALAQADVGIAI 501
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 5e-06
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 10/63 (15%)
Query: 784 ARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEA 843
A PE K ++ +A GR+ M GDGTND AL QA VGVA+ NS ++A
Sbjct: 491 AEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM----------NSGTQA 540
Query: 844 SKD 846
+K+
Sbjct: 541 AKE 543
|
Length = 681 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 49.0 bits (118), Expect = 8e-06
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 788 PEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKD 846
PE K ++ +A GR+ M GDGTND AL QA VGVA+ NS ++A+K+
Sbjct: 493 PEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM----------NSGTQAAKE 541
|
Length = 679 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 9e-06
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 26/137 (18%)
Query: 220 YYSLFTLFMLFM-----FESTMAKSRLKTLTE-IRRVRVDNQTIMVHRCGKWVKLAGTDL 273
+ T+ + F F +A+ R K + +R+ + + ++ G + T+L
Sbjct: 64 FNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATEL 123
Query: 274 VPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKL 333
GD+V + + GE +P+D ++ G A V+E+ +TGES P ++ RE+G
Sbjct: 124 KKGDIVLV-----EAGE--IIPSDGEVIEGVASVDESAITGESAP-----VI-RESGG-- 168
Query: 334 SARRDKSHVLFGGTKIL 350
D S V GGT++L
Sbjct: 169 ----DFSSVT-GGTRVL 180
|
Length = 681 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 48.6 bits (117), Expect = 1e-05
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 26/138 (18%)
Query: 219 WYYSLFTLFMLFM-----FESTMAKSRLKTLTE-IRRVRVDNQTIMVHRCGKWVKLAGTD 272
+ TL++ F F +A+ R K + +R + D + G ++ T+
Sbjct: 63 GFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARKLREPGAAEEVPATE 122
Query: 273 LVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEK 332
L GD+V + + GE +PAD ++ G A V+E+ +TGES P ++ RE+G
Sbjct: 123 LRKGDIVLV-----EAGE--IIPADGEVIEGVASVDESAITGESAP-----VI-RESGG- 168
Query: 333 LSARRDKSHVLFGGTKIL 350
D S V GGT++L
Sbjct: 169 -----DFSSVT-GGTRVL 180
|
Length = 679 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 2e-05
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 14/83 (16%)
Query: 538 DNKLVGDPLEKAALK---GIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVR 594
+++GDP E A L + + P+ V + F S KRMS V +
Sbjct: 16 GGEIIGDPTESALLVFAEKLGIDVEELRARYPR------VAEI---PFNSERKRMSTVHK 66
Query: 595 V--QEEFFAFVKGAPETIQDRLT 615
+ + + FVKGAPE I +R +
Sbjct: 67 LEDDDGYRLFVKGAPERILERCS 89
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 48.0 bits (114), Expect = 2e-05
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 10/63 (15%)
Query: 784 ARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEA 843
A PE K ++ +A G++ M GDGTND AL QA VGVA+ NS ++A
Sbjct: 490 AEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAM----------NSGTQA 539
Query: 844 SKD 846
+K+
Sbjct: 540 AKE 542
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 48.0 bits (114), Expect = 2e-05
Identities = 98/454 (21%), Positives = 160/454 (35%), Gaps = 132/454 (29%)
Query: 490 DKTGTLTSDDMEFR--GVVGLSNAELEDDMTKVPVR------------------------ 523
DKTGTLT + MEF+ + G+ ++
Sbjct: 459 DKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLE 518
Query: 524 -------TQEI---------LASCHALVFVDNKLVGDPLEKAALKGIDWSYKS-DEKAMP 566
T+E LA+C+ +V +V D +K +D+ +S DE+A+
Sbjct: 519 LSKSGKDTEEAKHVHDFFLALAACNTIV----PIVVDDTSDPTVKLMDYQGESPDEQALV 574
Query: 567 KRGGGNAVQIVQR---------------------HHFASHLKRMSVV-------VRVQEE 598
+++R H F S KRMSV+ V+V
Sbjct: 575 YAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKV--- 631
Query: 599 FFAFVKGAPET---IQDRLTDLPSSYIETYKKYTHQ----GSRVLALAFKSLPD------ 645
FVKGA + + DR L + I + + H G R L + + L D
Sbjct: 632 ---FVKGADTSMFSVIDR--SLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQW 686
Query: 646 ---------MTVSDARSLHR--DEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLA 694
+ A L + VEN LT G + +++ + + L+ + +
Sbjct: 687 HFSFEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVW 746
Query: 695 MITGDQALTACYVASQVHIVTK---PVLI---------------LCPVKNGKVYEWVSPD 736
++TGD+ TA + ++T ++I L K +S +
Sbjct: 747 VLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQN 806
Query: 737 ETEKIQYSEKEVEGLTDAHDLC--IGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELI 794
+ V + D L + + E L Q ++ V+ + RVAP QK I
Sbjct: 807 TGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVV----LCCRVAPLQKAGI 862
Query: 795 LTTFKAVGR-MTLMCGDGTNDVGALKQAHVGVAL 827
+ K MTL GDG NDV ++ A VGV +
Sbjct: 863 VALVKNRTSDMTLAIGDGANDVSMIQMADVGVGI 896
|
Length = 1178 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 2e-04
Identities = 18/46 (39%), Positives = 23/46 (50%)
Query: 782 VFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVAL 827
V A + PE K I+ + M GDG ND AL A VG+A+
Sbjct: 405 VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAM 450
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 2e-04
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 781 KVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVAL 827
+V A V P+ K + ++ GR M GDG ND AL QA VG+A+
Sbjct: 691 EVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAM 737
|
Length = 834 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 3e-04
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 19/78 (24%)
Query: 261 RCGKWVKLAGTDLVPGDVVSI---GRSSGQTGEDKSVPADMLILGGSAIVNEAILTGEST 317
R G+ ++A DL PGDV+ + GR +PAD +L A +E+ LTGES
Sbjct: 249 RDGEREEVAIADLRPGDVIEVAAGGR----------LPADGKLLSPFASFDESALTGESI 298
Query: 318 PQWKVSIMGRETGEKLSA 335
P + R TGEK+ A
Sbjct: 299 P------VERATGEKVPA 310
|
Length = 741 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 9e-04
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 777 IPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALL 828
IP +VFA PE K I+ K +M G+G ND+ AL++A +G+ +
Sbjct: 68 IPVERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTI 119
|
Length = 152 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 0.001
Identities = 60/218 (27%), Positives = 88/218 (40%), Gaps = 58/218 (26%)
Query: 294 VPADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHT 353
VP D I G A ++EA+LTGE PQ K G+ + A GT ++Q
Sbjct: 355 VPVDGEITQGEAWLDEAMLTGEPIPQQKG------EGDSVHA----------GT-VVQ-- 395
Query: 354 PDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWE----------SGL 403
DG +V+ R S L R I + A S + S +
Sbjct: 396 ----------DG---SVLFRASAVGSHTTLSRIIRMVRQ---AQSSKPEIGQLADKISAV 439
Query: 404 FILFLVVFAVIAAGYVLKKGMEDPT-RSKYKLFLSCSLIITSVIPPELPMELSIAVNTSL 462
F+ +VV A+++A G P + Y L +I T+V+ P L +A S+
Sbjct: 440 FVPVVVVIALVSAAIWYFFG---PAPQIVYTL-----VIATTVLIIACPCALGLATPMSI 491
Query: 463 IA----LARRGIFCTEPFRIPFAGKVDMCCFDKTGTLT 496
I+ A G+ + + A +D FDKTGTLT
Sbjct: 492 ISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLT 529
|
Length = 834 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.003
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 664 TFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHI 713
G +R D+ + ++ LK + M+TGD TA +A ++ I
Sbjct: 527 KLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGI 576
|
Length = 713 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.003
Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 664 TFAGFAVFNCPIREDSAKILSELKNS-SQDLAMITGDQALTACYVASQVHI 713
G +R ++ + ++ LK + L M+TGD A VA+++ I
Sbjct: 374 ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGI 424
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 40.5 bits (94), Expect = 0.004
Identities = 63/290 (21%), Positives = 114/290 (39%), Gaps = 55/290 (18%)
Query: 219 WYYSLFTLFMLFM----FESTMAKSRLKTLTE-IRRVRVDNQTIMVHRCGKWVKLAGTDL 273
+ +S+F + +L + F +A+ R K +R+ + + + + + G + + +DL
Sbjct: 64 YVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDGSYEMIDASDL 123
Query: 274 VPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKL 333
G +V + TGE +P D ++ G A V+E+ +TGES P K E+G
Sbjct: 124 KKGHIVRV-----ATGE--QIPNDGKVIKGLATVDESAITGESAPVIK------ESGGDF 170
Query: 334 SARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTER 393
+ GGT + D + + G + K++ + +T +
Sbjct: 171 DN-------VIGGTSV------------ASDWLEVEITSEPG-HSFLDKMIGLVEGATRK 210
Query: 394 VTANSWESGLFILFL----VVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIIT---SVI 446
T N E LF L + + VI Y P LS +++I +I
Sbjct: 211 KTPN--EIALFTLLMTLTIIFLVVILTMY--------PLAKFLNFNLSIAMLIALAVCLI 260
Query: 447 PPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLT 496
P + LS + + + I + G V++ DKTGT+T
Sbjct: 261 PTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTIT 310
|
Length = 673 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 853 | |||
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 99.98 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.93 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.47 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.21 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.81 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.61 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.51 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.48 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.43 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 98.41 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.38 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.36 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.36 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.35 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.33 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.31 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.27 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.25 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.24 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.23 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.18 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 98.16 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.16 | |
| PLN02887 | 580 | hydrolase family protein | 98.15 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.12 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.06 | |
| PF12409 | 119 | P5-ATPase: P5-type ATPase cation transporter | 98.06 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.04 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.02 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.0 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.0 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.96 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 97.95 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.93 | |
| PLN02954 | 224 | phosphoserine phosphatase | 97.9 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.85 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 97.83 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.78 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.64 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.5 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.41 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.39 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 97.37 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.33 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.3 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.22 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.2 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.12 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 96.98 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 96.98 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 96.88 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 96.84 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 96.83 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.77 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.6 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 96.59 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 96.57 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 96.44 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 96.39 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.32 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 96.31 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 96.3 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.16 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.1 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 95.98 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 95.95 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 95.9 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 95.69 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 95.68 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 95.67 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 95.62 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 95.62 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 95.59 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 95.54 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 95.45 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 95.43 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 95.43 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 95.28 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 95.1 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 95.07 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 94.97 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 94.97 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 94.96 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 94.89 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 94.86 | |
| PLN02580 | 384 | trehalose-phosphatase | 94.68 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 94.61 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 94.6 | |
| PRK06769 | 173 | hypothetical protein; Validated | 94.55 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 94.43 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 94.15 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 94.05 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 93.78 | |
| PLN02940 | 382 | riboflavin kinase | 93.6 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 93.56 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 93.1 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 92.93 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 92.92 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 92.86 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 92.84 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 92.5 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 92.35 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 92.27 | |
| PLN02811 | 220 | hydrolase | 92.11 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 91.91 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 91.9 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 91.57 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 90.08 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 89.89 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 89.86 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 89.83 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 89.41 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 89.34 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 89.1 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 89.08 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 88.19 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 87.89 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 87.3 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 86.52 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 86.51 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 85.7 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 85.67 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 85.65 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 84.74 | |
| PLN03017 | 366 | trehalose-phosphatase | 84.19 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 84.19 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 84.18 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 83.15 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 82.42 |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-202 Score=1659.11 Aligned_cols=820 Identities=57% Similarity=0.936 Sum_probs=781.0
Q ss_pred ccccCCcceeEEEeeecccccceecchhhHHHHHHHHHHhhccCCc-----cchhhHHHHHHHHHHHHHhhcccccccce
Q 003049 3 SFHVGGKVVDRVDLLRKKHWVWRLDVWPFAILYSGWLIAIVPSIDF-----GDAAIVLGGLVAFHILVWLFTAWSVDFKC 77 (853)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~w~~~~~~ 77 (853)
...|. |.|+.+.||++||..+|+|||||++||+.|++.|+...+| +..+++++++.++|+|++|+++|+++++|
T Consensus 3 ~~~v~-~~v~~~~l~~~~~l~~~lyV~Pf~~l~a~~~~~~~~~~~~~~~~~~~t~i~~g~l~~~hilvlL~~~Wsv~v~~ 81 (1160)
T KOG0209|consen 3 KFRVD-PLVEMVILYVKRPLHKRLYVWPFAILYAMWLTLWYPQADFYEEFRELTFIALGALSAIHILVLLFTFWSVKVRC 81 (1160)
T ss_pred ccccc-chhhhheeeeeccccccccccchHHHHHHHHHHhhhccccceeeeeeeEEEecHHHHHHHHHHHHHhhchheeE
Confidence 34455 9999999999999999999999999999999999866652 44569999999999999999999999999
Q ss_pred eEEeecCCCcCCCcEEEEEeCCCCCceeEEEeeeecccCCCCCCCCCCcEEEEEeeeEEEEecCCCceeecCCCCccccc
Q 003049 78 FAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSSTPVDEDEICFDFRKQHFIYSREKGTFCKLPYPTKETFG 157 (853)
Q Consensus 78 ~~~~~~~~~~~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~y~~~~~~~~f~~~~~~~~~~~~ 157 (853)
+++|++.+++++|||++|+|++|+|+.++|||++....+ +..++||+|||.||+|+++++.|.++.||+++.+.
T Consensus 82 ~~~~~~~~~v~~at~i~v~pt~nnGs~~lv~l~~~~~~~------~~~q~~F~Fqk~ry~~~~e~~~F~~~~fp~~~~~g 155 (1160)
T KOG0209|consen 82 FFTCSKTKDVSKATHILVTPTPNNGSSELVPLHRGVLED------GMEQYFFEFQKKRYLYDEEKGKFSRLTFPTDEPFG 155 (1160)
T ss_pred EEeeccccCcccccEEEEEccCCCCCcceeEeeecccCC------CceEEEEEEEEeeEEEcccccceeccccCcCCcch
Confidence 999999999999999999999999999999999876422 24789999999999999999999999999999999
Q ss_pred cccccCCCCcHHHHHHHHHhcCCcccccCCccHHHHHHHHhhchhHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHH
Q 003049 158 YYLKCTGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMA 237 (853)
Q Consensus 158 ~~~~~~GLs~~~~~~~~~~~yG~N~~~~~~~~~~~l~~~~~~~pf~vf~i~~~~lw~~~~y~~~s~~~l~~lv~~~~~~~ 237 (853)
.|++++|+..+.++...+.+||+|.+++|+|+|.++|+|+..+|||+||+||++|||+|+|||||+|+++|++.+|++.+
T Consensus 156 ~~~k~~G~~~~~~i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPfFVFQVFcvgLWCLDeyWYySlFtLfMli~fE~tlV 235 (1160)
T KOG0209|consen 156 YFQKSTGHEEESEIKLAKHKYGKNKFDIVVPTFSELFKEHAVAPFFVFQVFCVGLWCLDEYWYYSLFTLFMLIAFEATLV 235 (1160)
T ss_pred hhhhccCcchHHHHHHHHHHhcCCccccCCccHHHHHHHhccCceeeHhHHhHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988788888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeecceeEEeeccCCCCcc
Q 003049 238 KSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGEST 317 (853)
Q Consensus 238 ~~~~k~~~~l~~m~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G~~~VdES~LTGES~ 317 (853)
+||.|++.++|+|+.+|+.+.|+|+++|+.+.++||+|||+|+|.+|.+|+ .||||.+|++|+|+||||||||||+
T Consensus 236 ~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~----~vPCDllLL~GsciVnEaMLtGESv 311 (1160)
T KOG0209|consen 236 KQRMRTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDS----HVPCDLLLLRGSCIVNEAMLTGESV 311 (1160)
T ss_pred HHHHHHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccC----cCCceEEEEecceeechhhhcCCCc
Confidence 999999999999999999999999999999999999999999999987666 9999999999999999999999999
Q ss_pred ccccccccCCCCCccccccC-CCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHHHHHhccccccCCc
Q 003049 318 PQWKVSIMGRETGEKLSARR-DKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTA 396 (853)
Q Consensus 318 Pv~K~~~~~~~~~~~~~~~~-~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l~r~i~~~~~~~~~ 396 (853)
|++|++++.++.++.+|.++ +|.|++|+||+++|++++.....++|||+|+|+|+||||+|+||+|+|+|+++.++++.
T Consensus 312 Pl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~aervTa 391 (1160)
T KOG0209|consen 312 PLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAERVTA 391 (1160)
T ss_pred cccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecceeeee
Confidence 99999999999999999998 59999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCchHHHHHHHHHHHHHHHhcceeccCCC
Q 003049 397 NSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPF 476 (853)
Q Consensus 397 ~~~~~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~ 476 (853)
++++++.||+||++||+++++|+|..|..+++|+.+++++.|++|+|++|||+|||+++|||+.|+.+|+|.+|||++|+
T Consensus 392 Nn~Etf~FILFLlVFAiaAa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPF 471 (1160)
T KOG0209|consen 392 NNRETFIFILFLLVFAIAAAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPF 471 (1160)
T ss_pred ccHHHHHHHHHHHHHHHHhhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCcc
Confidence 99999999999999999999999999999989999999999999999999999999999999999999999999999999
Q ss_pred CcccCccccEEEeCCCCcccCCCeEEEEEEecCCC-ccccccCCCCHHHHHHHHHhccceeeCCcccCCHHHHHHHhhcC
Q 003049 477 RIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA-ELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGID 555 (853)
Q Consensus 477 ~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~-~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~a~l~~~~ 555 (853)
|||++|+||+||||||||||+++|.|+|+.+.+.+ ....+.++.|.++.+++|+||+++..+++++|||+|+|++++.+
T Consensus 472 RIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~le~~lVGDPlEKA~l~~v~ 551 (1160)
T KOG0209|consen 472 RIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVLLEDKLVGDPLEKATLEAVG 551 (1160)
T ss_pred ccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHHhcCcccCChHHHHHHHhcC
Confidence 99999999999999999999999999999985543 56677888999999999999999999999999999999999999
Q ss_pred ceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEeCC-----EEEEEEcCcHHHHHHhhccCChhHHHHHHHHHh
Q 003049 556 WSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQE-----EFFAFVKGAPETIQDRLTDLPSSYIETYKKYTH 630 (853)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~-----~~~~~~KGapE~i~~~~~~ip~~~~~~~~~~~~ 630 (853)
|.+++++.+.+.++...+++|.++|+|+|++|||||+++.++ ++++.+|||||+|.+++.++|++|+++|++|++
T Consensus 552 W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~dvP~dY~~iYk~ytR 631 (1160)
T KOG0209|consen 552 WNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRDVPKDYDEIYKRYTR 631 (1160)
T ss_pred cccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHhCchhHHHHHHHHhh
Confidence 999999999998888889999999999999999999999854 699999999999999999999999999999999
Q ss_pred ccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHH
Q 003049 631 QGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQ 710 (853)
Q Consensus 631 ~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~ 710 (853)
+|+||+|+|||.++....++.++++|+++|+||+|+||++|.||+|+|++++|++|++++|+++|||||||+||+|||++
T Consensus 632 ~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~ 711 (1160)
T KOG0209|consen 632 QGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKE 711 (1160)
T ss_pred ccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehhe
Confidence 99999999999999888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCeEEEccCC--CCceeEeecCCcccccccchhhhc-cccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeC
Q 003049 711 VHIVTKPVLILCPVK--NGKVYEWVSPDETEKIQYSEKEVE-GLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVA 787 (853)
Q Consensus 711 ~gI~~~~~~il~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~s 787 (853)
+||+.++..+++.++ +++.+.|+++|++..+|+++.... .+...|++|+||++++++.+++.+.+++++++||||++
T Consensus 712 v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARva 791 (1160)
T KOG0209|consen 712 VGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVA 791 (1160)
T ss_pred eeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeC
Confidence 999998777776654 445899999999999999884433 38889999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCc
Q 003049 788 PEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPP 833 (853)
Q Consensus 788 P~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~ 833 (853)
|.||+.+|+.||+.|+.|+|||||+||+||||+||||||+.+++++
T Consensus 792 P~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~e 837 (1160)
T KOG0209|consen 792 PKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPEE 837 (1160)
T ss_pred hhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCChh
Confidence 9999999999999999999999999999999999999999988874
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-142 Score=1208.48 Aligned_cols=763 Identities=30% Similarity=0.487 Sum_probs=645.7
Q ss_pred hhhHHHHHHHHHHHHHhhcccccccceeEEeecCCCcCCCcEEEEEeCCCCCceeEEEeeeecccCCCCC-----CCCCC
Q 003049 51 AAIVLGGLVAFHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAVSST-----PVDED 125 (853)
Q Consensus 51 ~~~~~~~~~~~~~~~~l~~~w~~~~~~~~~~~~~~~~~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 125 (853)
+++.+++++++ ++++|++||.|+|+.++.+.+| ++++|++|.|.. ++|..++.++.+....+..+. .+...
T Consensus 40 ~~y~v~~vLTl-G~~~Li~rWlP~~~vk~~~~Pc-sl~~ae~V~Ie~--~~g~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 115 (1140)
T KOG0208|consen 40 IFYNVLCVLTL-GLFHLIFRWLPKWKVKLRGSPC-SLADAEWVVIED--QNGTSEIVDVLAQSSEEPLSTSRYSQEGVGR 115 (1140)
T ss_pred hhhHHHHHHHh-hHHHHHHhhcchheEEEEeccc-CcccccEEEEEc--CCCcEEehhhhhhhccCCccccchhhcccch
Confidence 34455666666 5568999999999999999997 799999999986 468889988876553222111 12234
Q ss_pred cEEEEEeeeEEEEecC-CCceeec---CCCCccc-ccccc-ccCCCCcHHHHHHHHHhcCCcccccCCccHHHHHHHHhh
Q 003049 126 EICFDFRKQHFIYSRE-KGTFCKL---PYPTKET-FGYYL-KCTGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCM 199 (853)
Q Consensus 126 ~~~f~~~~~~y~~~~~-~~~f~~~---~~~~~~~-~~~~~-~~~GLs~~~~~~~~~~~yG~N~~~~~~~~~~~l~~~~~~ 199 (853)
.++|.|++.+|.|.++ +..|.+. +...... .++.. .+.||... ++..|+..||+|.+..++++.++++.++.+
T Consensus 116 ~r~~~~kkl~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~gL~~~-~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL 194 (1140)
T KOG0208|consen 116 VRDFAYKKLEYDPVSELRFIWPPFQKAEFRDDPRWYSTESYVSNGLERQ-EIIDRRIIYGRNVISLPIKSISQILVKEVL 194 (1140)
T ss_pred hhhhhhhcceeccccccceeeccccchhhccchhhhccceeccCCccHH-HHHhHHhhcCCceeeeecccHHHHHHHhcc
Confidence 5799999999999886 4444441 1111111 22222 46899986 899999999999999999999999999999
Q ss_pred chhHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEECCEEEEeecCCcCCCeEE
Q 003049 200 EPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVV 279 (853)
Q Consensus 200 ~pf~vf~i~~~~lw~~~~y~~~s~~~l~~lv~~~~~~~~~~~k~~~~l~~m~~~~~~v~V~R~g~~~~I~s~~LvpGDiV 279 (853)
+|||+||+||+++|..|+|+||+.+++++.+.+....+++.++...++|+|...+++|+|+|||.|++|+++|||||||+
T Consensus 195 ~PfYlFQ~fSv~lW~~d~Y~~YA~cI~iisv~Si~~sv~e~r~qs~rlr~mv~~~~~V~V~R~g~~~ti~S~eLVPGDil 274 (1140)
T KOG0208|consen 195 NPFYLFQAFSVALWLADSYYYYAFCIVIISVYSIVLSVYETRKQSIRLRSMVKFTCPVTVIRDGFWETVDSSELVPGDIL 274 (1140)
T ss_pred chHHHHHhHHhhhhhcccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEECCEEEEEeccccccccEE
Confidence 99999999999999999999999999999999999999999999999999988889999999999999999999999999
Q ss_pred EEcCCCCCCCCCceeecceeeecceeEEeeccCCCCccccccccccCCCC---CccccccCCCCeEEEeceEEeecCCCC
Q 003049 280 SIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSIMGRET---GEKLSARRDKSHVLFGGTKILQHTPDK 356 (853)
Q Consensus 280 ~l~~g~~d~~~~~~vPaD~ill~G~~~VdES~LTGES~Pv~K~~~~~~~~---~~~~~~~~~~~~~lf~GT~v~q~~~~~ 356 (853)
.+.++ +. ..|||++|++|+|+||||||||||+|+.|.+++.... .....++.+++|.+|+||+++|++...
T Consensus 275 ~i~~~-~~-----~~PcDa~Li~g~civNEsmLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~ 348 (1140)
T KOG0208|consen 275 YIPPP-GK-----IMPCDALLISGDCIVNESMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYL 348 (1140)
T ss_pred EECCC-Ce-----EeecceEEEeCcEEeecccccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCC
Confidence 99983 22 9999999999999999999999999999999873222 224445558899999999999988654
Q ss_pred CCCCCCCCCcEEEEEEeeCcccchhHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHH
Q 003049 357 TFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFL 436 (853)
Q Consensus 357 ~~~~~~~~g~~~~~V~~tG~~T~~g~l~r~i~~~~~~~~~~~~~~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l 436 (853)
.+.++|+|+||||+|.+|+|+|+|+++++..+.+++++++|++++.++|+++++|..+..... +.+....++
T Consensus 349 -------g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~~-g~~~~~iii 420 (1140)
T KOG0208|consen 349 -------GGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKFYRDSFKFILFLVIIALIGFIYTAIVLNLL-GVPLKTIII 420 (1140)
T ss_pred -------CCceEEEEEeccccccccHHHHhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHc-CCCHHHHhh
Confidence 788999999999999999999999999999999999999999999999999988866554333 566778899
Q ss_pred HhheeeEeecCCCchHHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCC----c
Q 003049 437 SCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA----E 512 (853)
Q Consensus 437 ~~~~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~----~ 512 (853)
++++++|.+|||+||+++++++.++..||+|+||||.+|.||+.+|++|++|||||||||+|++++.++...++. .
T Consensus 421 rsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~ 500 (1140)
T KOG0208|consen 421 RSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGP 500 (1140)
T ss_pred hhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999975432 0
Q ss_pred c--------------c-cccCCCC-HHHHHHHHHhccceeeCCcccCCHHHHHHHhhcCceeccCc----------c---
Q 003049 513 L--------------E-DDMTKVP-VRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDE----------K--- 563 (853)
Q Consensus 513 ~--------------~-~~~~~~~-~~~~~~la~chsl~~~~~~~~gdple~a~l~~~~~~~~~~~----------~--- 563 (853)
. . ......+ ......+|+|||+...+|.++|||+|..|+++.+|.+...+ .
T Consensus 501 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p 580 (1140)
T KOG0208|consen 501 ELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIP 580 (1140)
T ss_pred hhhhhhhhhccceeeccccccCCchHHHHHHHhhhceeEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccC
Confidence 0 0 0001112 35677899999999999999999999999999999985421 0
Q ss_pred --cccCC---C-----CCcceEEEEEecCCCCCCceEEEEEeC--CEEEEEEcCcHHHHHHhh--ccCChhHHHHHHHHH
Q 003049 564 --AMPKR---G-----GGNAVQIVQRHHFASHLKRMSVVVRVQ--EEFFAFVKGAPETIQDRL--TDLPSSYIETYKKYT 629 (853)
Q Consensus 564 --~~~~~---~-----~~~~~~i~~~~~F~s~~krmsvi~~~~--~~~~~~~KGapE~i~~~~--~~ip~~~~~~~~~~~ 629 (853)
..+.. . ....+.++++|||+|++||||||++.. +++++|+|||||.|.+.| .++|++|.+.+++|+
T Consensus 581 ~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~tvP~dy~evl~~Yt 660 (1140)
T KOG0208|consen 581 TVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPETVPADYQEVLKEYT 660 (1140)
T ss_pred CEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcccCCccHHHHHHHHH
Confidence 11111 0 112589999999999999999999985 579999999999999999 578999999999999
Q ss_pred hccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHH
Q 003049 630 HQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVAS 709 (853)
Q Consensus 630 ~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~ 709 (853)
.+|+||||+|+|.++...+++.+.++|+.+|+||+|+|+++|+|+||++++.+|++|++|+||++|+||||.+||+.|||
T Consensus 661 ~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVak 740 (1140)
T KOG0208|consen 661 HQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAK 740 (1140)
T ss_pred hCCeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhh
Confidence 99999999999999987888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCcCCCCe--EEEccC--CCC--ceeEeecCCcccccccchh-----------hhccccCceeEEEehhhhHHhhc--c
Q 003049 710 QVHIVTKPV--LILCPV--KNG--KVYEWVSPDETEKIQYSEK-----------EVEGLTDAHDLCIGGDCFEMLQQ--T 770 (853)
Q Consensus 710 ~~gI~~~~~--~il~~~--~~~--~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~itG~~l~~l~~--~ 770 (853)
+|||+.+.. .+.... +.+ ..++|..++..+....... .......++++|++|+.|+.+.. .
T Consensus 741 eCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~ 820 (1140)
T KOG0208|consen 741 ECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFP 820 (1140)
T ss_pred cccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcH
Confidence 999997642 222222 222 2799998887665422211 12234567999999999999984 3
Q ss_pred hhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCC
Q 003049 771 SAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVP 832 (853)
Q Consensus 771 ~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~ 832 (853)
+.+.+++.+..|||||+|+||.++|+.||+.|++|+|||||+|||+|||+||||||+++++.
T Consensus 821 ~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSeaEA 882 (1140)
T KOG0208|consen 821 ELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSEAEA 882 (1140)
T ss_pred HHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhhhhH
Confidence 67899999999999999999999999999999999999999999999999999999986654
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-138 Score=1286.57 Aligned_cols=781 Identities=42% Similarity=0.669 Sum_probs=664.9
Q ss_pred hHHHHHHHHHHHHHhhcccccccceeEEeecCCCcCCCcEEEEEeCCCCCceeEEEeeeecccCC----CCCCCCCCcEE
Q 003049 53 IVLGGLVAFHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQSAV----SSTPVDEDEIC 128 (853)
Q Consensus 53 ~~~~~~~~~~~~~~l~~~w~~~~~~~~~~~~~~~~~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 128 (853)
++.+..++.|++++|+++|+++||++++|++|+..+.|+|+++.|.+++|..+++++++....+. ....+....+|
T Consensus 18 ~~~~~~~~~~g~~~l~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (1054)
T TIGR01657 18 IYLVTLILTFGLVLLLLTWLPEWKVKLRYVPVSNEDAETVVIVDPTPNSGSDYIVELSNKSLSNDLQTENAVEGGEEPIY 97 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHhhhEEEeeCCcccCcEEEEEECCcccCCceEEeecccccccccccccccCCCCceEE
Confidence 45556777789999999999999999999999999999999999988899999999876432110 01112245689
Q ss_pred EEEeeeEEEEecCCCc-eeecCCCCccc-ccccc----ccCCCCcHHHHHHHHHhcCCcccccCCccHHHHHHHHhhchh
Q 003049 129 FDFRKQHFIYSREKGT-FCKLPYPTKET-FGYYL----KCTGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCMEPF 202 (853)
Q Consensus 129 f~~~~~~y~~~~~~~~-f~~~~~~~~~~-~~~~~----~~~GLs~~~~~~~~~~~yG~N~~~~~~~~~~~l~~~~~~~pf 202 (853)
|+||+.||+|+++++. |.+++++.++. +..+. ...||+++ |+++|+++||+|++++|.|+++++|++++++||
T Consensus 98 f~~~~~~y~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~GLs~~-e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~ 176 (1054)
T TIGR01657 98 FDFRKQRFSYHEKELKIFSPLPYLFKEKSFGVYSTCAGHSNGLTTG-DIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPF 176 (1054)
T ss_pred EEEEEEEEEEECCCCceEEecccccccccchhhhhhhhhccCCCHH-HHHHHHHhcCCCeeecCCCCHHHHHHHHHhchH
Confidence 9999999999999996 99999987764 44443 35799987 999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEECCEEEEeecCCcCCCeEEEEc
Q 003049 203 FVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIG 282 (853)
Q Consensus 203 ~vf~i~~~~lw~~~~y~~~s~~~l~~lv~~~~~~~~~~~k~~~~l~~m~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~ 282 (853)
++||+||+++|++++||+|++++++++++.+....++++|+.++|++|...+..++|+|||+|++|+++||||||+|.|+
T Consensus 177 ~i~~i~~~~l~~~~~~~~~~~~i~~i~~~~~~~~~~~~~k~~~~L~~~~~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~ 256 (1054)
T TIGR01657 177 YVFQVFSVILWLLDEYYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVHKPQSVIVIRNGKWVTIASDELVPGDIVSIP 256 (1054)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeeEEEEECCEEEEEEcccCCCCCEEEEe
Confidence 99999999999999999999999999999999999999999999999987788999999999999999999999999999
Q ss_pred --CCCCCCCCCceeecceeeecceeEEeeccCCCCccccccccccCC-CCCc-cccccCCCCeEEEeceEEeecCCCCCC
Q 003049 283 --RSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSIMGR-ETGE-KLSARRDKSHVLFGGTKILQHTPDKTF 358 (853)
Q Consensus 283 --~g~~d~~~~~~vPaD~ill~G~~~VdES~LTGES~Pv~K~~~~~~-~~~~-~~~~~~~~~~~lf~GT~v~q~~~~~~~ 358 (853)
+|+ .|||||+|++|+|.||||+|||||.|+.|.+++.. .+++ ......+++|++|+||.|+|++++..
T Consensus 257 ~~~g~-------~iPaD~~ll~g~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g- 328 (1054)
T TIGR01657 257 RPEEK-------TMPCDSVLLSGSCIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPG- 328 (1054)
T ss_pred cCCCC-------EecceEEEEeCcEEEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCC-
Confidence 877 99999999999999999999999999999986531 1222 22234478999999999998765321
Q ss_pred CCCCCCCcEEEEEEeeCcccchhHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHh
Q 003049 359 PLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSC 438 (853)
Q Consensus 359 ~~~~~~g~~~~~V~~tG~~T~~g~l~r~i~~~~~~~~~~~~~~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~ 438 (853)
+|.+.|+|++||++|.+|+++|++.+++++.+++++++..|+.+++++|+++++++|..+... +.++..++++|
T Consensus 329 -----~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~~~~-~~~~~~~~l~~ 402 (1054)
T TIGR01657 329 -----DTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIKD-GRPLGKIILRS 402 (1054)
T ss_pred -----CCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcHHHHHHHH
Confidence 478999999999999999999999999888899999999999999999988888877666544 56788899999
Q ss_pred heeeEeecCCCchHHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCcc----c
Q 003049 439 SLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAEL----E 514 (853)
Q Consensus 439 ~~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~----~ 514 (853)
+.++++++||+||++++++++.|+.+|+|++|+|++|.++|.+|++|+||||||||||+|+|+|.+++..++... .
T Consensus 403 l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~ 482 (1054)
T TIGR01657 403 LDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIV 482 (1054)
T ss_pred HHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCcccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999987543211 0
Q ss_pred cc-cCCCCHHHHHHHHHhccceeeCCcccCCHHHHHHHhhcCceeccC-cccccCC--------CCCcceEEEEEecCCC
Q 003049 515 DD-MTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSD-EKAMPKR--------GGGNAVQIVQRHHFAS 584 (853)
Q Consensus 515 ~~-~~~~~~~~~~~la~chsl~~~~~~~~gdple~a~l~~~~~~~~~~-~~~~~~~--------~~~~~~~i~~~~~F~s 584 (853)
.+ ....+.....++++||++...+|+.+|||+|.|++++++|.+..+ +...... .....++++++|||+|
T Consensus 483 ~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S 562 (1054)
T TIGR01657 483 TEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSS 562 (1054)
T ss_pred ccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecC
Confidence 11 112344567789999999988889999999999999999987652 2111110 1125789999999999
Q ss_pred CCCceEEEEEeC--CEEEEEEcCcHHHHHHhhc--cCChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhh
Q 003049 585 HLKRMSVVVRVQ--EEFFAFVKGAPETIQDRLT--DLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVE 660 (853)
Q Consensus 585 ~~krmsvi~~~~--~~~~~~~KGapE~i~~~~~--~ip~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E 660 (853)
++|||||+++.. +++++++|||||.|+++|. ++|++|.+.+++|+++|+||||+|||.++..+..+..+++|+++|
T Consensus 563 ~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E 642 (1054)
T TIGR01657 563 ALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVE 642 (1054)
T ss_pred CCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCcCCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHh
Confidence 999999999874 4678999999999999997 789999999999999999999999999986555556678899999
Q ss_pred cCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCC-eEEEcc-----CCCCceeEeec
Q 003049 661 NGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKP-VLILCP-----VKNGKVYEWVS 734 (853)
Q Consensus 661 ~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~-~~il~~-----~~~~~~~~~~~ 734 (853)
+||+|+|+++|+||+|||++++|++|+++||+++|+||||+.||.+||++|||++++ ..++.. .+....+.|+.
T Consensus 643 ~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~ 722 (1054)
T TIGR01657 643 SNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEV 722 (1054)
T ss_pred cCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEe
Confidence 999999999999999999999999999999999999999999999999999999654 333322 12234688988
Q ss_pred CCcccc------cccch---hhhccccCceeEEEehhhhHHhhc--chhHHhhcccceEEEeeChhhHHHHHHHHHHcCC
Q 003049 735 PDETEK------IQYSE---KEVEGLTDAHDLCIGGDCFEMLQQ--TSAVLRVIPYVKVFARVAPEQKELILTTFKAVGR 803 (853)
Q Consensus 735 ~~~~~~------~~~~~---~~~~~~~~~~~l~itG~~l~~l~~--~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~ 803 (853)
.++... .+... .......+.+++|+||++++.+.+ .+++.+++.++.||||++|+||.+||+.||+.|+
T Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~ 802 (1054)
T TIGR01657 723 IDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDY 802 (1054)
T ss_pred cCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCC
Confidence 876321 11111 112233456789999999998754 3578999999999999999999999999999999
Q ss_pred EEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccccCCccC
Q 003049 804 MTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 804 ~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
+|+|||||+|||||||+|||||||+++ | +..+++...++++|.+|
T Consensus 803 ~V~m~GDG~ND~~ALK~AdVGIam~~~-d---as~AA~f~l~~~~~~~I 847 (1054)
T TIGR01657 803 TVGMCGDGANDCGALKQADVGISLSEA-E---ASVAAPFTSKLASISCV 847 (1054)
T ss_pred eEEEEeCChHHHHHHHhcCcceeeccc-c---ceeecccccCCCcHHHH
Confidence 999999999999999999999999865 3 23567889999998765
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-106 Score=989.28 Aligned_cols=617 Identities=29% Similarity=0.404 Sum_probs=514.9
Q ss_pred cCCCCcHHHHHHHHHhcCCcccccCC-ccHHHHHHHHhhchhHHHHHhhhhhhcchhhH----HHHHHHHHHHHHHHHHH
Q 003049 162 CTGHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGLWCLDEYW----YYSLFTLFMLFMFESTM 236 (853)
Q Consensus 162 ~~GLs~~~~~~~~~~~yG~N~~~~~~-~~~~~l~~~~~~~pf~vf~i~~~~lw~~~~y~----~~s~~~l~~lv~~~~~~ 236 (853)
..||+++ |+.+|++.||+|++.... .+++..|..++.+||..+.+++.++..+-+.| .++..+++++++.....
T Consensus 42 ~~GLs~~-e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~~~~~~I~~~i~~n~~~g 120 (917)
T COG0474 42 TTGLSEE-EVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAGVDAIVILLVVVINALLG 120 (917)
T ss_pred ccCCCHH-HHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcceeeehHHHHHHHHHH
Confidence 5799996 999999999999998654 58999999999999988888877776655555 44444445555444444
Q ss_pred HHHHHHH---HHHHHhhhcCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeeccee-EEeeccC
Q 003049 237 AKSRLKT---LTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSA-IVNEAIL 312 (853)
Q Consensus 237 ~~~~~k~---~~~l~~m~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G~~-~VdES~L 312 (853)
.+|+.|+ ++++++|. +.+++|+|||+|++|+++||||||||.++.|+ .||||++|+++++ .||||+|
T Consensus 121 ~~qe~~a~~~l~~lk~~~--~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd-------~vPAD~rLl~~~~l~VdEs~L 191 (917)
T COG0474 121 FVQEYRAEKALEALKKMS--SPKAKVLRDGKFVEIPASELVPGDIVLLEAGD-------VVPADLRLLESSDLEVDESAL 191 (917)
T ss_pred HHHHHHHHHHHHHHHhhc--cCceEEEeCCcEEEecHHHCCCCcEEEECCCC-------ccccceEEEEecCceEEcccc
Confidence 5555554 77777765 46899999999999999999999999999987 9999999999987 8999999
Q ss_pred CCCccccccccccCCCCCccccccC-CCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHHHHHhcccc
Q 003049 313 TGESTPQWKVSIMGRETGEKLSARR-DKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFST 391 (853)
Q Consensus 313 TGES~Pv~K~~~~~~~~~~~~~~~~-~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l~r~i~~~~ 391 (853)
||||.|+.|.+.+....+.. .+ +++|++|+||.|. .|.+.++|++||++|.+|++.+.+...+
T Consensus 192 TGES~pv~K~~~~~~~~~~~---~~~d~~n~l~sGt~V~-------------~G~~~giVvaTG~~T~~G~ia~~~~~~~ 255 (917)
T COG0474 192 TGESLPVEKQALPLTKSDAP---LGLDRDNMLFSGTTVV-------------SGRAKGIVVATGFETEFGKIARLLPTKK 255 (917)
T ss_pred cCCCcchhcccccccccccc---ccCCccceEEeCCEEE-------------cceEEEEEEEEcCccHHHHHHHhhcccc
Confidence 99999999988654432222 23 6789999999999 6899999999999999999999998776
Q ss_pred ccCCcchhhHHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCchHHHHHHHHHHHHHHHhccee
Q 003049 392 ERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIF 471 (853)
Q Consensus 392 ~~~~~~~~~~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~ 471 (853)
+..+++++....+..+++.++++++++++..+.......+...++.++.+++++||++||+.++++.+.+..+|+|++++
T Consensus 256 ~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~~~i 335 (917)
T COG0474 256 EVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAI 335 (917)
T ss_pred ccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccch
Confidence 77889999999999999888888877776665443122267889999999999999999999999999999999999999
Q ss_pred ccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccC-CCC---HHHHHHHHHhccceeeC--CcccCCH
Q 003049 472 CTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMT-KVP---VRTQEILASCHALVFVD--NKLVGDP 545 (853)
Q Consensus 472 ~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~-~~~---~~~~~~la~chsl~~~~--~~~~gdp 545 (853)
|+++.++|.+|++|+||+|||||||+|+|+|.+++..++.....+.. ..+ ....+.++.||+..... ....|||
T Consensus 336 vr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdp 415 (917)
T COG0474 336 VRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDP 415 (917)
T ss_pred hhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCceecCCc
Confidence 99999999999999999999999999999999999874111111100 011 13456778999876543 3468999
Q ss_pred HHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEe-CCEEEEEEcCcHHHHHHhhcc--------
Q 003049 546 LEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRV-QEEFFAFVKGAPETIQDRLTD-------- 616 (853)
Q Consensus 546 le~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~-~~~~~~~~KGapE~i~~~~~~-------- 616 (853)
+|.|+++++.+.-...+ ...-...+++++.+||+|++||||++++. ++++++++|||||.|+++|+.
T Consensus 416 tE~Al~~~a~~~~~~~~----~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~ 491 (917)
T COG0474 416 TEGALVEFAEKLGFSLD----LSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLT 491 (917)
T ss_pred cHHHHHHHHHhcCCcCC----HHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccC
Confidence 99999999865421000 11112345789999999999999999985 556999999999999999973
Q ss_pred --CChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEE
Q 003049 617 --LPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLA 694 (853)
Q Consensus 617 --ip~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~ 694 (853)
.++.+.+..++|+++|+||+++|||.++...... .. +++|+||+|+|+++|+||+|+|++++|+.|++|||+++
T Consensus 492 ~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~---~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~ 567 (917)
T COG0474 492 EEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDD---EV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVW 567 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccc---hh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEE
Confidence 2467888999999999999999999776432211 11 78999999999999999999999999999999999999
Q ss_pred EEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCce-eEEEehhhhHHhhcchhH
Q 003049 695 MITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAH-DLCIGGDCFEMLQQTSAV 773 (853)
Q Consensus 695 miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~itG~~l~~l~~~~~~ 773 (853)
||||||+.||.+||++|||..+. . ++++||.+++.+.++ ++
T Consensus 568 MiTGD~~~TA~aIa~~~Gi~~~~-------------------------------------~~~~vi~G~el~~l~~~-el 609 (917)
T COG0474 568 MITGDHVETAIAIAKECGIEAEA-------------------------------------ESALVIDGAELDALSDE-EL 609 (917)
T ss_pred EECCCCHHHHHHHHHHcCCCCCC-------------------------------------CceeEeehHHhhhcCHH-HH
Confidence 99999999999999999987431 1 679999999999885 78
Q ss_pred HhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEec-cCCCcCcccccccccccccCCccC
Q 003049 774 LRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALL-NAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 774 ~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~-~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
.+.+.++.||||+||+||.+||+.||+.|++|+|||||+|||||||+|||||||+ +|+|+ +++++|....+++|.++
T Consensus 610 ~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtda--ak~Aadivl~dd~~~~i 687 (917)
T COG0474 610 AELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDA--AKEAADIVLLDDNFATI 687 (917)
T ss_pred HHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHH--HHhhcceEeecCcHHHH
Confidence 8888888899999999999999999999999999999999999999999999999 68886 88889999999998764
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-100 Score=942.80 Aligned_cols=645 Identities=21% Similarity=0.276 Sum_probs=506.7
Q ss_pred CCCcccccccccc--CCCCcHHHHHHHHHhcCCcccccCC-ccHHHHHHHHhhchhHHHHHhhhhhhcchhhHHHHHHHH
Q 003049 150 YPTKETFGYYLKC--TGHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTL 226 (853)
Q Consensus 150 ~~~~~~~~~~~~~--~GLs~~~~~~~~~~~yG~N~~~~~~-~~~~~l~~~~~~~pf~vf~i~~~~lw~~~~y~~~s~~~l 226 (853)
.+.++.++.++.+ +||+++ |+++|+++||+|+++.+. +++|.+|++++.+||.++++++.++++...+|.++++++
T Consensus 10 ~~~~~v~~~l~t~~~~GLs~~-ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~~~~~~~iIl 88 (1053)
T TIGR01523 10 DIADEAAEFIGTSIPEGLTHD-EAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMHDWIEGGVIS 88 (1053)
T ss_pred CCHHHHHHHhCcCcccCCCHH-HHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 3455667777653 699997 999999999999999875 589999999999999999999999999888898888888
Q ss_pred HHHHHHHHHHHHHHHHH---HHHHHhhhcCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeecc
Q 003049 227 FMLFMFESTMAKSRLKT---LTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGG 303 (853)
Q Consensus 227 ~~lv~~~~~~~~~~~k~---~~~l~~m~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G 303 (853)
+++++......+|+.|+ +++|++| .+.+++|+|||++++|+++||||||||.++.|+ .|||||+|+++
T Consensus 89 ~vv~in~~i~~~QE~~aekal~aL~~l--~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd-------~VPAD~rLi~~ 159 (1053)
T TIGR01523 89 AIIALNILIGFIQEYKAEKTMDSLKNL--ASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGD-------TIPADLRLIET 159 (1053)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCceEEEeCCeeeecCHhhCCCCCEEEECCCC-------EeeccEEEEEe
Confidence 87777777777776555 4555544 345899999999999999999999999999988 99999999998
Q ss_pred -eeEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhH
Q 003049 304 -SAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGK 382 (853)
Q Consensus 304 -~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~ 382 (853)
++.||||+|||||.||.|.+.+....++ -...+++.|++|+||.|+ +|.+.|+|++||.+|..|+
T Consensus 160 ~~L~VDES~LTGES~pV~K~~~~~~~~~~-~~~~~d~~n~lf~GT~V~-------------~G~g~~vVvatG~~T~~Gk 225 (1053)
T TIGR01523 160 KNFDTDEALLTGESLPVIKDAHATFGKEE-DTPIGDRINLAFSSSAVT-------------KGRAKGICIATALNSEIGA 225 (1053)
T ss_pred CceEEEchhhcCCCCceeccccccccccc-cCCcccCCCccccCceEE-------------eeeEEEEEEEecCccHHHH
Confidence 5899999999999999998633211000 112346789999999999 6999999999999999999
Q ss_pred HHHHhccccc-----------------------------------cCCcchhhHHHHHHHHHHHHHHHHhhhhhhcccCC
Q 003049 383 LMRTILFSTE-----------------------------------RVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDP 427 (853)
Q Consensus 383 l~r~i~~~~~-----------------------------------~~~~~~~~~~~fi~~ll~~ai~~~~~~~~~~~~~~ 427 (853)
+.+++...++ ..++.++....+..++.+++++.+++++..+...
T Consensus 226 Ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~- 304 (1053)
T TIGR01523 226 IAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFD- 304 (1053)
T ss_pred HHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-
Confidence 9998743221 1256666666666666555555444433322111
Q ss_pred CchhhHHHHHhheeeEeecCCCchHHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEe
Q 003049 428 TRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVG 507 (853)
Q Consensus 428 ~~~~~~~~l~~~~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~ 507 (853)
.....++.++.++++++|++||+.++++.+.+..+|+|++++++++.++|.+|+++++|+|||||||+|+|+|..++.
T Consensus 305 --~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~ 382 (1053)
T TIGR01523 305 --VDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWI 382 (1053)
T ss_pred --hhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEE
Confidence 123456677888899999999999999999999999999999999999999999999999999999999999999874
Q ss_pred cCC---------C--ccc-cc---------------------c--------C--CCC--------HHHHHHHHHhcccee
Q 003049 508 LSN---------A--ELE-DD---------------------M--------T--KVP--------VRTQEILASCHALVF 536 (853)
Q Consensus 508 ~~~---------~--~~~-~~---------------------~--------~--~~~--------~~~~~~la~chsl~~ 536 (853)
.+. . ... .+ . + +.+ ...+...+.||....
T Consensus 383 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~ 462 (1053)
T TIGR01523 383 PRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATV 462 (1053)
T ss_pred cCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCee
Confidence 310 0 000 00 0 0 000 123445667876554
Q ss_pred eC----C--cccCCHHHHHHHhhcC-ceeccC-----ccccc-------------CCCCCcceEEEEEecCCCCCCceEE
Q 003049 537 VD----N--KLVGDPLEKAALKGID-WSYKSD-----EKAMP-------------KRGGGNAVQIVQRHHFASHLKRMSV 591 (853)
Q Consensus 537 ~~----~--~~~gdple~a~l~~~~-~~~~~~-----~~~~~-------------~~~~~~~~~i~~~~~F~s~~krmsv 591 (853)
.+ + ...|||+|.|++.++. +.+... ..... .......+++++++||+|++||||+
T Consensus 463 ~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msv 542 (1053)
T TIGR01523 463 FKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMAS 542 (1053)
T ss_pred eccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEE
Confidence 32 2 3679999999998863 211100 00000 0011245789999999999999999
Q ss_pred EEEeC-C-EEEEEEcCcHHHHHHhhccC---------------ChhHHHHHHHHHhccceEEEEEeeeCCCCChh--hh-
Q 003049 592 VVRVQ-E-EFFAFVKGAPETIQDRLTDL---------------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVS--DA- 651 (853)
Q Consensus 592 i~~~~-~-~~~~~~KGapE~i~~~~~~i---------------p~~~~~~~~~~~~~G~rvlala~k~l~~~~~~--~~- 651 (853)
+++.+ + ++++++|||||.|+++|... .+.+.+..++|+++|+||||+|||.++..+.. ..
T Consensus 543 v~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~ 622 (1053)
T TIGR01523 543 IYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLK 622 (1053)
T ss_pred EEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhh
Confidence 99874 3 47899999999999999532 13466778899999999999999998753211 11
Q ss_pred -hhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCcee
Q 003049 652 -RSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVY 730 (853)
Q Consensus 652 -~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~ 730 (853)
...+|+++|+||+|+|+++|+||+|+|++++|++|+++||+|+|+||||+.||.+||+++||.+++.....
T Consensus 623 ~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~-------- 694 (1053)
T TIGR01523 623 NETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDR-------- 694 (1053)
T ss_pred ccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccc--------
Confidence 12356789999999999999999999999999999999999999999999999999999999854210000
Q ss_pred EeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcC
Q 003049 731 EWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGD 810 (853)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GD 810 (853)
+ ......++||.+++.+.+ +++.+++.++.||||++|+||.++|+.||+.|++|+|+||
T Consensus 695 -----~---------------~~~~~~vitG~~l~~l~~-~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GD 753 (1053)
T TIGR01523 695 -----D---------------EIMDSMVMTGSQFDALSD-EEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGD 753 (1053)
T ss_pred -----c---------------ccccceeeehHHhhhcCH-HHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCC
Confidence 0 001347999999999876 5678888899999999999999999999999999999999
Q ss_pred CcccHHHHHhCCceEEec-cCCCcCcccccccccccccCCccC
Q 003049 811 GTNDVGALKQAHVGVALL-NAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 811 G~ND~~ALk~AdVGIAl~-~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
|+||+||||+|||||||+ +|++. ++.++|.++.+++|.+|
T Consensus 754 GvNDapaLk~AdVGIAmg~~gt~v--ak~aADivl~dd~f~~I 794 (1053)
T TIGR01523 754 GVNDSPSLKMANVGIAMGINGSDV--AKDASDIVLSDDNFASI 794 (1053)
T ss_pred CcchHHHHHhCCccEecCCCccHH--HHHhcCEEEecCCHHHH
Confidence 999999999999999998 78885 88899999999999875
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-101 Score=868.28 Aligned_cols=642 Identities=24% Similarity=0.340 Sum_probs=502.9
Q ss_pred CCCccccccccc--cCCCCcHHHHHHHHHhcCCcccccCC-ccHHHHHHHHhhchhHHHHHhhhhhhcchhhHHHHHHHH
Q 003049 150 YPTKETFGYYLK--CTGHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTL 226 (853)
Q Consensus 150 ~~~~~~~~~~~~--~~GLs~~~~~~~~~~~yG~N~~~~~~-~~~~~l~~~~~~~pf~vf~i~~~~lw~~~~y~~~s~~~l 226 (853)
.++++.+++|.. .+||+++ |+.+|+++||.|+++.+. .++|+++.+|+.+|...+++.+.++.+....|..++.+.
T Consensus 7 ~~v~e~~~~f~t~~~~GLt~~-ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~~~~e~~vI~ 85 (972)
T KOG0202|consen 7 KSVSEVLAEFGTDLEEGLTSD-EVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLADFDEPFVIT 85 (972)
T ss_pred CcHHHHHHHhCcCcccCCCHH-HHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHhcccceeee
Confidence 456677778873 6799997 999999999999998764 689999999999999999888888877766666666665
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-hcCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeecc-e
Q 003049 227 FMLFMFESTMAKSRLKTLTEIRRV-RVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGG-S 304 (853)
Q Consensus 227 ~~lv~~~~~~~~~~~k~~~~l~~m-~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G-~ 304 (853)
+++++.....++|++++.+++..+ ...|..++|+|+|+.+.+++.||||||||.++-|| +||||.+|++- +
T Consensus 86 liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGD-------kVPADlRl~e~~s 158 (972)
T KOG0202|consen 86 LIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGD-------KIPADLRLIEAKS 158 (972)
T ss_pred eeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCC-------ccccceeEEeeee
Confidence 555555555567766554444443 23567899999999999999999999999999988 99999999997 5
Q ss_pred eEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHHH
Q 003049 305 AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLM 384 (853)
Q Consensus 305 ~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l~ 384 (853)
..||||.|||||.|+.|..-.... +.-...++|.|++|+||.|. .|.++|+|+.||.+|..|++.
T Consensus 159 l~iDeS~LTGEs~pv~K~t~~v~~--~~~~~~~dk~NiaFsGT~V~-------------~G~a~GIVi~TG~nTeiG~I~ 223 (972)
T KOG0202|consen 159 LRIDESSLTGESEPVSKDTDAVPK--DENADVQDKKNIAFSGTLVV-------------AGRAKGIVIGTGLNTEIGKIF 223 (972)
T ss_pred eeeecccccCCcccccccCccccC--CCCCccccceeeEeecceee-------------cCceeEEEEeccccchHHHHH
Confidence 789999999999999996533221 11112348999999999998 799999999999999999999
Q ss_pred HHhccccccCCcchhhHHHHHHHHH-HHHHHHHhhhhh-hcc-cCC---C---chhhHHHHHhheeeEeecCCCchHHHH
Q 003049 385 RTILFSTERVTANSWESGLFILFLV-VFAVIAAGYVLK-KGM-EDP---T---RSKYKLFLSCSLIITSVIPPELPMELS 455 (853)
Q Consensus 385 r~i~~~~~~~~~~~~~~~~fi~~ll-~~ai~~~~~~~~-~~~-~~~---~---~~~~~~~l~~~~ii~~~vP~~Lp~~ls 455 (853)
++|....+.+++.++....|-..|. +++++....|.. .|. .+| + +.....|..++.+.++++|++||+.++
T Consensus 224 ~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT 303 (972)
T KOG0202|consen 224 KMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVT 303 (972)
T ss_pred HHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhh
Confidence 9888776667887765555444333 222222111111 111 111 2 333445667788888999999999999
Q ss_pred HHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCC--cc-----------------ccc
Q 003049 456 IAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA--EL-----------------EDD 516 (853)
Q Consensus 456 lav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~--~~-----------------~~~ 516 (853)
.+++.+.+||+|++.+++....+|.||.+++||+|||||||+|+|.+..++..+.. .. ...
T Consensus 304 ~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~ 383 (972)
T KOG0202|consen 304 TTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDG 383 (972)
T ss_pred hhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecC
Confidence 99999999999999999999999999999999999999999999999999865432 00 000
Q ss_pred c----CCCCH----HHHHHHHHhccceeeCCcc-----cCCHHHHHHHhhcCceeccCccc----ccCCCC------Ccc
Q 003049 517 M----TKVPV----RTQEILASCHALVFVDNKL-----VGDPLEKAALKGIDWSYKSDEKA----MPKRGG------GNA 573 (853)
Q Consensus 517 ~----~~~~~----~~~~~la~chsl~~~~~~~-----~gdple~a~l~~~~~~~~~~~~~----~~~~~~------~~~ 573 (853)
. ..... +...+-+.|+......+.. .|.|.|.|+...+.. ++-.+.. ....+. ...
T Consensus 384 ~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeK-m~l~~~~~~~~s~~~~~~c~~~~~~~ 462 (972)
T KOG0202|consen 384 LYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEK-MGLPGTRSTNLSNEEASACNRVYSRL 462 (972)
T ss_pred ccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHH-cCCCcchhhcccccccccchhHHHHh
Confidence 0 01111 2233445676554443444 999999998765421 1111100 000000 123
Q ss_pred eEEEEEecCCCCCCceEEEEEeC-C--EEEEEEcCcHHHHHHhhcc---------CC------hhHHHHHHHHHhccceE
Q 003049 574 VQIVQRHHFASHLKRMSVVVRVQ-E--EFFAFVKGAPETIQDRLTD---------LP------SSYIETYKKYTHQGSRV 635 (853)
Q Consensus 574 ~~i~~~~~F~s~~krmsvi~~~~-~--~~~~~~KGapE~i~~~~~~---------ip------~~~~~~~~~~~~~G~rv 635 (853)
++-.+.+||+|++|+|||.+... + ++.+|+|||||.|+++|++ .| +.+.+...+|+++|+||
T Consensus 463 ~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRv 542 (972)
T KOG0202|consen 463 FKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRV 542 (972)
T ss_pred hhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceE
Confidence 45568999999999999999863 2 3789999999999999943 22 45677788999999999
Q ss_pred EEEEeeeCCCC---ChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcC
Q 003049 636 LALAFKSLPDM---TVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVH 712 (853)
Q Consensus 636 lala~k~l~~~---~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~g 712 (853)
||+|+++.+.. +....+..+|...|+||+|+|++++.||+|++++++|+.|+++||||+||||||..||.+|||++|
T Consensus 543 LalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iG 622 (972)
T KOG0202|consen 543 LALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIG 622 (972)
T ss_pred EEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhC
Confidence 99999987641 122234567889999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHH
Q 003049 713 IVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKE 792 (853)
Q Consensus 713 I~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~ 792 (853)
|...+. +-..-++||++|+.|.+ +++.+...++.||||++|++|.
T Consensus 623 i~~~~e----------------------------------d~~~~~~TG~efD~ls~-~~~~~~~~~~~vFaR~~P~HK~ 667 (972)
T KOG0202|consen 623 IFSEDE----------------------------------DVSSMALTGSEFDDLSD-EELDDAVRRVLVFARAEPQHKL 667 (972)
T ss_pred CCcCCc----------------------------------cccccccchhhhhcCCH-HHHHHHhhcceEEEecCchhHH
Confidence 985311 01345899999999987 5677888899999999999999
Q ss_pred HHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEec-cCCCcCcccccccccccccCCccC
Q 003049 793 LILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALL-NAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 793 ~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~-~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
+||+.||++|.+|+|+|||+||+||||.|||||||| +||++ ++.++|.++.||||++|
T Consensus 668 kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdV--aKeAsDMVL~DDnFstI 726 (972)
T KOG0202|consen 668 KIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDV--AKEASDMVLADDNFSTI 726 (972)
T ss_pred HHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHh--hHhhhhcEEecCcHHHH
Confidence 999999999999999999999999999999999999 99997 99999999999999986
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-99 Score=923.17 Aligned_cols=605 Identities=24% Similarity=0.301 Sum_probs=483.4
Q ss_pred CCccccccccc-cCCCCcHHHHHHHHHhcCCcccccCCc-cHHHHHHHHhhchhHHHHHhhhhhhcchhhHHHHHHHHHH
Q 003049 151 PTKETFGYYLK-CTGHSTEAKIAVATEKWGRNVFEYPQP-TFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFM 228 (853)
Q Consensus 151 ~~~~~~~~~~~-~~GLs~~~~~~~~~~~yG~N~~~~~~~-~~~~l~~~~~~~pf~vf~i~~~~lw~~~~y~~~s~~~l~~ 228 (853)
+.++.++.++. .+|||++ |+++|+++||+|+++.+++ ++|.+|++++.+||+++++++.++.++.+.|..+++++++
T Consensus 53 ~~~~v~~~l~~~~~GLs~~-ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~~~~~a~~I~~i 131 (902)
T PRK10517 53 PEEELWKTFDTHPEGLNEA-EVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATEDLFAAGVIALM 131 (902)
T ss_pred CHHHHHHHhCCCCCCCCHH-HHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 34445666653 4699987 9999999999999998875 6999999999999999887655544443445677777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh-hcCCceEEEEEC------CEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeee
Q 003049 229 LFMFESTMAKSRLKTLTEIRRV-RVDNQTIMVHRC------GKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLIL 301 (853)
Q Consensus 229 lv~~~~~~~~~~~k~~~~l~~m-~~~~~~v~V~R~------g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill 301 (853)
+++......+|++|+.+.++++ +..+.+++|+|| |++++|+++||||||+|.|++|+ .|||||+|+
T Consensus 132 v~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd-------~IPaDg~li 204 (902)
T PRK10517 132 VAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGD-------MIPADLRIL 204 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCC-------EEeeeEEEE
Confidence 7777777777777766555543 224568999999 78999999999999999999988 999999999
Q ss_pred cce-eEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccch
Q 003049 302 GGS-AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQ 380 (853)
Q Consensus 302 ~G~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~ 380 (853)
+|+ +.||||+|||||.|+.|.+.+..+.+ ....+++|.+|+||.|+ +|.+.++|++||.+|..
T Consensus 205 ~g~~l~VDES~LTGES~PV~K~~~~~~~~~---~~~~~~~n~vfaGT~V~-------------~G~~~~vV~atG~~T~~ 268 (902)
T PRK10517 205 QARDLFVAQASLTGESLPVEKFATTRQPEH---SNPLECDTLCFMGTNVV-------------SGTAQAVVIATGANTWF 268 (902)
T ss_pred EcCceEEEecCcCCCCCceecccccccccc---cCccccccceeeCceEe-------------eeeEEEEEEEeccccHH
Confidence 996 69999999999999999874321111 11235788999999999 69999999999999999
Q ss_pred hHHHHHhccccccCCcchhhHHHHHHHH----HHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCchHHHHH
Q 003049 381 GKLMRTILFSTERVTANSWESGLFILFL----VVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSI 456 (853)
Q Consensus 381 g~l~r~i~~~~~~~~~~~~~~~~fi~~l----l~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp~~lsl 456 (853)
|++.+.+....+..++.++....+...+ ++++++.+++.++. ..++...++.++.++++++||+||+++++
T Consensus 269 GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~-----~~~~~~~l~~alsv~V~~~Pe~LP~~vt~ 343 (902)
T PRK10517 269 GQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYT-----KGDWWEAALFALSVAVGLTPEMLPMIVTS 343 (902)
T ss_pred HHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHh-----cCCHHHHHHHHHHHHHHHcccHHHHHHHH
Confidence 9999998877666777666554443333 33332222221111 22456678888899999999999999999
Q ss_pred HHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHhcccee
Q 003049 457 AVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVF 536 (853)
Q Consensus 457 av~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~ 536 (853)
+++.+..+|+|+|++++++.++|.+|++|++|||||||||+|+|+|..+....+. ...+.+...+.|...
T Consensus 344 ~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~~--------~~~~ll~~a~l~~~~-- 413 (902)
T PRK10517 344 TLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISGK--------TSERVLHSAWLNSHY-- 413 (902)
T ss_pred HHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCCC--------CHHHHHHHHHhcCCc--
Confidence 9999999999999999999999999999999999999999999999987532221 011222222222111
Q ss_pred eCCcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEe-CCEEEEEEcCcHHHHHHhhc
Q 003049 537 VDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRV-QEEFFAFVKGAPETIQDRLT 615 (853)
Q Consensus 537 ~~~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~-~~~~~~~~KGapE~i~~~~~ 615 (853)
+ ...|||+|.|++.++.... .. .....++.++++||+|++|||+++++. ++.+.+++|||||.|.++|.
T Consensus 414 -~-~~~~~p~d~All~~a~~~~--~~------~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~ 483 (902)
T PRK10517 414 -Q-TGLKNLLDTAVLEGVDEES--AR------SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCS 483 (902)
T ss_pred -C-CCCCCHHHHHHHHHHHhcc--hh------hhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhch
Confidence 1 2369999999999865321 00 011346678899999999999999876 45678999999999999995
Q ss_pred cC-------C------hhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHH
Q 003049 616 DL-------P------SSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKI 682 (853)
Q Consensus 616 ~i-------p------~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~ 682 (853)
.+ | +.+.+..++++++|+||+++|||.++..+. ...+ ..|+||+|+|+++|+||+|||++++
T Consensus 484 ~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~----~~~~-~~e~~l~~lGli~~~Dp~R~~a~~a 558 (902)
T PRK10517 484 QVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREG----DYQR-ADESDLILEGYIAFLDPPKETTAPA 558 (902)
T ss_pred hhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCcccc----cccc-ccccCceeeehHhhhCcchhhHHHH
Confidence 42 1 235566788999999999999998864321 1112 2488999999999999999999999
Q ss_pred HHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehh
Q 003049 683 LSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGD 762 (853)
Q Consensus 683 I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~ 762 (853)
|++|+++|++|+|+||||+.||.+||+++||... -+++|.
T Consensus 559 I~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~----------------------------------------~v~~G~ 598 (902)
T PRK10517 559 LKALKASGVTVKILTGDSELVAAKVCHEVGLDAG----------------------------------------EVLIGS 598 (902)
T ss_pred HHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcc----------------------------------------CceeHH
Confidence 9999999999999999999999999999999521 268999
Q ss_pred hhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccc
Q 003049 763 CFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSE 842 (853)
Q Consensus 763 ~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~ 842 (853)
+++.+.+ +++.+.++++.||||++|+||.++|+.||+.|++|+|+|||+||+||||+|||||||++|+|+ +++++|.
T Consensus 599 el~~l~~-~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdv--AkeaADi 675 (902)
T PRK10517 599 DIETLSD-DELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDI--AREAADI 675 (902)
T ss_pred HHHhCCH-HHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHH--HHHhCCE
Confidence 9998865 678899999999999999999999999999999999999999999999999999999999885 8999999
Q ss_pred cccccCCccC
Q 003049 843 ASKDENTKSV 852 (853)
Q Consensus 843 ~~~~~~~~~~ 852 (853)
++.+++|.+|
T Consensus 676 VLldd~~~~I 685 (902)
T PRK10517 676 ILLEKSLMVL 685 (902)
T ss_pred EEecCChHHH
Confidence 9999999875
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-98 Score=911.57 Aligned_cols=602 Identities=23% Similarity=0.266 Sum_probs=486.2
Q ss_pred CCccccccccc-cCCCCcHHHHHHHHHhcCCcccccCCc-cHHHHHHHHhhchhHHHHHhhhhhhcchhhHHHHHHHHHH
Q 003049 151 PTKETFGYYLK-CTGHSTEAKIAVATEKWGRNVFEYPQP-TFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFM 228 (853)
Q Consensus 151 ~~~~~~~~~~~-~~GLs~~~~~~~~~~~yG~N~~~~~~~-~~~~l~~~~~~~pf~vf~i~~~~lw~~~~y~~~s~~~l~~ 228 (853)
+.++.++.+.. .+||+++ |+++|+++||+|+++.+.+ +++.+|++++.+||.++++++.++|++.+.|+.+++++++
T Consensus 19 ~~~~~~~~l~~~~~GLs~~-ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~~~~~~~iI~~i 97 (867)
T TIGR01524 19 GKETLLRKLGVHETGLTNV-EVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTDDLEATVIIALM 97 (867)
T ss_pred CHHHHHHHhCCCCCCCCHH-HHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhHHHHHHhhhH
Confidence 34444555653 4699997 9999999999999988764 6999999999999999999999988887888888888877
Q ss_pred HHHHHHHHHHHHHHH---HHHHHhhhcCCceEEEEE------CCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeeccee
Q 003049 229 LFMFESTMAKSRLKT---LTEIRRVRVDNQTIMVHR------CGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADML 299 (853)
Q Consensus 229 lv~~~~~~~~~~~k~---~~~l~~m~~~~~~v~V~R------~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~i 299 (853)
+++......+++.|+ +++|+++ .+..++|+| ||++++|+++||||||+|.+++|+ .|||||+
T Consensus 98 v~~~~~i~~~~e~~a~ka~~~L~~l--~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd-------~VPaDg~ 168 (867)
T TIGR01524 98 VLASGLLGFIQESRAERAAYALKNM--VKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGD-------IIPADAR 168 (867)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh--ccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCC-------EEcccEE
Confidence 777777777766555 5555554 345799999 999999999999999999999988 9999999
Q ss_pred eecce-eEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCccc
Q 003049 300 ILGGS-AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFET 378 (853)
Q Consensus 300 ll~G~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T 378 (853)
|++|+ +.||||+|||||.|+.|.+.+..+.+. ...+++|.+|+||.|. +|.+.++|++||.+|
T Consensus 169 li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~---~~~~~~n~vfaGT~v~-------------~G~~~~~V~~tG~~T 232 (867)
T TIGR01524 169 VISARDLFINQSALTGESLPVEKFVEDKRARDP---EILERENLCFMGTNVL-------------SGHAQAVVLATGSST 232 (867)
T ss_pred EEecCceEEEcccccCCCCcccccCCccccccc---cccccccceecCCeEE-------------EeEEEEEEEEEcCcc
Confidence 99996 699999999999999998743211111 1236789999999999 699999999999999
Q ss_pred chhHHHHHhccccccCCcchhhHHHHHH----HHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCchHHH
Q 003049 379 SQGKLMRTILFSTERVTANSWESGLFIL----FLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMEL 454 (853)
Q Consensus 379 ~~g~l~r~i~~~~~~~~~~~~~~~~fi~----~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp~~l 454 (853)
..|++.+.+.. .+..++.++....+.. +.++++++.+++.++. ..++...++.++.++++++||+||+++
T Consensus 233 ~~gki~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~al~l~v~~iP~~Lp~~v 306 (867)
T TIGR01524 233 WFGSLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLM-----KGDWLEAFLFALAVAVGLTPEMLPMIV 306 (867)
T ss_pred HHHHHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHh-----cCCHHHHHHHHHHHHHHhCcchHHHHH
Confidence 99999998877 4445565554444333 3333333322222111 224566788888899999999999999
Q ss_pred HHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHhccc
Q 003049 455 SIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHAL 534 (853)
Q Consensus 455 slav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl 534 (853)
+++++.+..+|+|+|++++++.++|.+|++|++|||||||||+|+|+|.+++..++. .....+.++++++.
T Consensus 307 t~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~---------~~~~~l~~a~l~~~ 377 (867)
T TIGR01524 307 SSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGE---------TSERVLKMAWLNSY 377 (867)
T ss_pred HHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCC---------CHHHHHHHHHHhCC
Confidence 999999999999999999999999999999999999999999999999998643221 12222223333221
Q ss_pred eeeCCcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEeCC-EEEEEEcCcHHHHHHh
Q 003049 535 VFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQE-EFFAFVKGAPETIQDR 613 (853)
Q Consensus 535 ~~~~~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~-~~~~~~KGapE~i~~~ 613 (853)
. + ...+||+|.|+++++.... .. .....++.++.+||+|++|||+++++..+ .+++++|||||.+.++
T Consensus 378 ~--~-~~~~~p~~~Al~~~~~~~~-~~-------~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~ 446 (867)
T TIGR01524 378 F--Q-TGWKNVLDHAVLAKLDESA-AR-------QTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTV 446 (867)
T ss_pred C--C-CCCCChHHHHHHHHHHhhc-hh-------hHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHh
Confidence 1 1 2367999999998865320 00 01134667888999999999999987644 4789999999999999
Q ss_pred hccC-------------ChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchH
Q 003049 614 LTDL-------------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSA 680 (853)
Q Consensus 614 ~~~i-------------p~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~ 680 (853)
|... .+.+.+..+.++++|+||+++|||+++..+. +..+ +.|+||+|+|+++|+||+|+|++
T Consensus 447 c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~----~~~~-~~e~~l~~lGli~l~Dp~R~~~~ 521 (867)
T TIGR01524 447 CTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEA----DFTK-TDEEQLIIEGFLGFLDPPKESTK 521 (867)
T ss_pred chhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccc----cccc-cccCCcEEEEEEEeeCCCchhHH
Confidence 9642 1346677789999999999999999864321 1112 24889999999999999999999
Q ss_pred HHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEe
Q 003049 681 KILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIG 760 (853)
Q Consensus 681 ~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~it 760 (853)
++|++|+++||+++|+||||+.||.+||+++||.++ -+++
T Consensus 522 ~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~----------------------------------------~v~~ 561 (867)
T TIGR01524 522 EAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAN----------------------------------------DFLL 561 (867)
T ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC----------------------------------------Ceee
Confidence 999999999999999999999999999999999632 1578
Q ss_pred hhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccc
Q 003049 761 GDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSS 840 (853)
Q Consensus 761 G~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~ 840 (853)
|.+++.+.+ +++.+++.++.||||++|+||.++|+.||++|++|+|+|||+||+||||+|||||||++|+|+ +++++
T Consensus 562 g~~l~~~~~-~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdv--Ak~aA 638 (867)
T TIGR01524 562 GADIEELSD-EELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADI--AKEAS 638 (867)
T ss_pred cHhhhhCCH-HHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHH--HHHhC
Confidence 888888765 578889999999999999999999999999999999999999999999999999999998885 89999
Q ss_pred cccccccCCccC
Q 003049 841 SEASKDENTKSV 852 (853)
Q Consensus 841 ~~~~~~~~~~~~ 852 (853)
|.++.+++|.+|
T Consensus 639 DiVLldd~~~~I 650 (867)
T TIGR01524 639 DIILLEKSLMVL 650 (867)
T ss_pred CEEEecCChHHH
Confidence 999999999865
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-98 Score=924.10 Aligned_cols=612 Identities=23% Similarity=0.279 Sum_probs=482.0
Q ss_pred ccccccccc--cCCCC--cHHHHHHHHHhcCCcccccCCc-cHHHHHHHHhhchhHHHHHhhhhhhcchh----------
Q 003049 153 KETFGYYLK--CTGHS--TEAKIAVATEKWGRNVFEYPQP-TFQKLMKENCMEPFFVFQVFCVGLWCLDE---------- 217 (853)
Q Consensus 153 ~~~~~~~~~--~~GLs--~~~~~~~~~~~yG~N~~~~~~~-~~~~l~~~~~~~pf~vf~i~~~~lw~~~~---------- 217 (853)
++.++.++. .+||+ ++ |+++|+++||+|+++.|.+ +++.+|++++.+|+.++++++.+++++..
T Consensus 45 ~~~~~~l~t~~~~GLs~~~~-ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~ 123 (941)
T TIGR01517 45 EGIATKLKTDLNEGVRLSSS-TLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKAD 123 (941)
T ss_pred HHHHHHhCcCcccCCCCCHH-HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCc
Confidence 344555654 46999 76 9999999999999998865 89999999999999888777766665422
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--cCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCc
Q 003049 218 ---YWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVR--VDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDK 292 (853)
Q Consensus 218 ---y~~~s~~~l~~lv~~~~~~~~~~~k~~~~l~~m~--~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~ 292 (853)
.|+.++++++++++......+++.++.++++++. ..+.+++|+|||+|++|+++||||||+|.|++|+
T Consensus 124 ~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd------- 196 (941)
T TIGR01517 124 TETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGD------- 196 (941)
T ss_pred cccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCC-------
Confidence 6777877766665555555556555555554443 2246899999999999999999999999999988
Q ss_pred eeecceeeecc-eeEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEE
Q 003049 293 SVPADMLILGG-SAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVV 371 (853)
Q Consensus 293 ~vPaD~ill~G-~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V 371 (853)
.|||||+|++| ++.||||+|||||.|+.|.+ ++.|++|+||.|. +|.+.++|
T Consensus 197 ~IPaD~~li~g~~l~VdES~LTGES~pv~K~~--------------~~~n~v~~GT~v~-------------~G~~~~iV 249 (941)
T TIGR01517 197 VVPADGVFISGLSLEIDESSITGESDPIKKGA--------------PKDSFLLSGTVVN-------------EGSGRMLV 249 (941)
T ss_pred EecccEEEEEcCcEEEEecccCCCCCcccccC--------------CCCceEEeCCeEE-------------eeEEEEEE
Confidence 99999999999 79999999999999999975 1357899999999 68999999
Q ss_pred EeeCcccchhHHHHHhccccccCCcchhhHH----HHHHHHHHHHHHHHhhh---hhhc-c-cC---C---CchhhHHHH
Q 003049 372 LRTGFETSQGKLMRTILFSTERVTANSWESG----LFILFLVVFAVIAAGYV---LKKG-M-ED---P---TRSKYKLFL 436 (853)
Q Consensus 372 ~~tG~~T~~g~l~r~i~~~~~~~~~~~~~~~----~fi~~ll~~ai~~~~~~---~~~~-~-~~---~---~~~~~~~~l 436 (853)
++||.+|..|++++.+..+.+ .++.++... .+..+.++++++.++++ +... . .+ + ...+...++
T Consensus 250 ~~tG~~T~~gki~~~~~~~~~-~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (941)
T TIGR01517 250 TAVGVNSFGGKLMMELRAEGE-DTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFI 328 (941)
T ss_pred EEeCCCcHHHHHHHhhccCCC-CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHH
Confidence 999999999999998876543 344433322 33332222222222211 1111 0 00 0 124566788
Q ss_pred HhheeeEeecCCCchHHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCC-cccc
Q 003049 437 SCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA-ELED 515 (853)
Q Consensus 437 ~~~~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~-~~~~ 515 (853)
.++.+++++|||+||++++++++.++.+|+|++++++++..+|.+|++|++|||||||||+|+|+|.+++..++. ....
T Consensus 329 ~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~ 408 (941)
T TIGR01517 329 IAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRD 408 (941)
T ss_pred HHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCc
Confidence 899999999999999999999999999999999999999999999999999999999999999999998754321 0000
Q ss_pred ccCCCCHH---HHHHHHHhccceeeC------CcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCC
Q 003049 516 DMTKVPVR---TQEILASCHALVFVD------NKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHL 586 (853)
Q Consensus 516 ~~~~~~~~---~~~~la~chsl~~~~------~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~ 586 (853)
.....+.. .+...+.|++..... ....|||+|.|+++++.+.- .+... ....+++++.+||+|++
T Consensus 409 ~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~-~~~~~-----~~~~~~~~~~~pF~s~~ 482 (941)
T TIGR01517 409 VLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLG-RDYQE-----VRAEEKVVKIYPFNSER 482 (941)
T ss_pred ccccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcC-CCHHH-----HHhhchhccccccCCCC
Confidence 00111111 222334444432211 24689999999999875421 11000 01235677889999999
Q ss_pred CceEEEEEeCC-EEEEEEcCcHHHHHHhhccC-------------ChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhh
Q 003049 587 KRMSVVVRVQE-EFFAFVKGAPETIQDRLTDL-------------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDAR 652 (853)
Q Consensus 587 krmsvi~~~~~-~~~~~~KGapE~i~~~~~~i-------------p~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~ 652 (853)
|||+++++.++ ++++++|||||.|.++|... .+++.+.+++|+++|+||+++|||.++..+..
T Consensus 483 k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~--- 559 (941)
T TIGR01517 483 KFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFP--- 559 (941)
T ss_pred CeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccc---
Confidence 99999998754 58899999999999999642 13567788999999999999999998643211
Q ss_pred hhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEe
Q 003049 653 SLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEW 732 (853)
Q Consensus 653 ~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~ 732 (853)
..+..|+||+|+|+++|+||+|+|++++|++||++|++++|+||||+.||.+||++|||.++
T Consensus 560 --~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~---------------- 621 (941)
T TIGR01517 560 --RKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTF---------------- 621 (941)
T ss_pred --cccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCC----------------
Confidence 12345899999999999999999999999999999999999999999999999999999843
Q ss_pred ecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCc
Q 003049 733 VSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGT 812 (853)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ 812 (853)
...+++|++++.+.+ +++.+++.++.||||++|+||.++|+.||+.|++|+|||||+
T Consensus 622 ----------------------~~~vi~G~~~~~l~~-~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGv 678 (941)
T TIGR01517 622 ----------------------GGLAMEGKEFRRLVY-EEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGT 678 (941)
T ss_pred ----------------------CceEeeHHHhhhCCH-HHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 124899999998765 678889999999999999999999999999999999999999
Q ss_pred ccHHHHHhCCceEEec-cCCCcCcccccccccccccCCccC
Q 003049 813 NDVGALKQAHVGVALL-NAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 813 ND~~ALk~AdVGIAl~-~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
||+||||+|||||||+ +|+|. +++++|.++.+|+|.+|
T Consensus 679 NDapALk~AdVGIAmg~~gtdv--Ak~aADivL~dd~f~~I 717 (941)
T TIGR01517 679 NDAPALKLADVGFSMGISGTEV--AKEASDIILLDDNFASI 717 (941)
T ss_pred chHHHHHhCCcceecCCCccHH--HHHhCCEEEecCCHHHH
Confidence 9999999999999999 89886 89999999999999765
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-98 Score=909.94 Aligned_cols=612 Identities=23% Similarity=0.309 Sum_probs=480.9
Q ss_pred CCccccccccc-cCCCCcHHHHHHHHHhcCCcccccCC-ccHHHHHHHHhhchhHHHHHhhhhhhcchhhH---------
Q 003049 151 PTKETFGYYLK-CTGHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGLWCLDEYW--------- 219 (853)
Q Consensus 151 ~~~~~~~~~~~-~~GLs~~~~~~~~~~~yG~N~~~~~~-~~~~~l~~~~~~~pf~vf~i~~~~lw~~~~y~--------- 219 (853)
+.++.++.++. .+|||++ |+++|+++||+|+++.++ +++|.+|++++.+||.++++++.+++++.++|
T Consensus 31 ~~~~v~~~l~~~~~GLs~~-ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~ 109 (903)
T PRK15122 31 SLEETLANLNTHRQGLTEE-DAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEET 109 (903)
T ss_pred CHHHHHHHhCCCCCCCCHH-HHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCccc
Confidence 44555666664 4699997 999999999999999876 57999999999999999988888888776543
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCceEEEEEC------CEEEEeecCCcCCCeEEEEcCCCCCCCC
Q 003049 220 --YYSLFTLFMLFMFESTMAKSRLKTLTEIRRVR-VDNQTIMVHRC------GKWVKLAGTDLVPGDVVSIGRSSGQTGE 290 (853)
Q Consensus 220 --~~s~~~l~~lv~~~~~~~~~~~k~~~~l~~m~-~~~~~v~V~R~------g~~~~I~s~~LvpGDiV~l~~g~~d~~~ 290 (853)
..++++++++++......+|++|+.+.++++. ..+.+++|+|| |++++|+++||||||+|.|++|+
T Consensus 110 ~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd----- 184 (903)
T PRK15122 110 DLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGD----- 184 (903)
T ss_pred cHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCC-----
Confidence 34555555555656666677666544444432 23568999999 48999999999999999999988
Q ss_pred Cceeecceeeecce-eEEeeccCCCCccccccccccC--C------CCCccccccCCCCeEEEeceEEeecCCCCCCCCC
Q 003049 291 DKSVPADMLILGGS-AIVNEAILTGESTPQWKVSIMG--R------ETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLK 361 (853)
Q Consensus 291 ~~~vPaD~ill~G~-~~VdES~LTGES~Pv~K~~~~~--~------~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~ 361 (853)
.|||||+|++|+ +.||||+|||||.|+.|.+.+. . ..++. ....+++|.+|+||.|+
T Consensus 185 --~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~-~~~~~~~n~vfaGT~V~----------- 250 (903)
T PRK15122 185 --MIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDE-GSLLDLPNICFMGTNVV----------- 250 (903)
T ss_pred --EEeeeEEEEEcCceEEEccccCCCCcceeeecccccccccccccccccc-CCcccccceEEeCCEEE-----------
Confidence 999999999996 6899999999999999986210 0 00010 11236789999999999
Q ss_pred CCCCcEEEEEEeeCcccchhHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhhee
Q 003049 362 TPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLI 441 (853)
Q Consensus 362 ~~~g~~~~~V~~tG~~T~~g~l~r~i~~~~~~~~~~~~~~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~i 441 (853)
+|.+.++|++||.+|..|++.+.+.. ++..++.++....+...+..++++....++..+... ..++...++.++.+
T Consensus 251 --~G~~~~~V~atG~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~-~~~~~~~l~~aisl 326 (903)
T PRK15122 251 --SGTATAVVVATGSRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFT-KGDWLEALLFALAV 326 (903)
T ss_pred --eeeEEEEEEEeccccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc-cCCHHHHHHHHHHH
Confidence 69999999999999999999998876 334455544333333222222222111111111111 23456678888999
Q ss_pred eEeecCCCchHHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCC
Q 003049 442 ITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVP 521 (853)
Q Consensus 442 i~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~ 521 (853)
+++++||+||++++++++.+..+|+|+|++++++..+|.+|++|++|||||||||+|+|+|.+++..++. .+
T Consensus 327 ~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~--------~~ 398 (903)
T PRK15122 327 AVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR--------KD 398 (903)
T ss_pred HHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC--------Ch
Confidence 9999999999999999999999999999999999999999999999999999999999999998754321 01
Q ss_pred HHHHHHHHHhccceeeCCcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEe-CCEEE
Q 003049 522 VRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRV-QEEFF 600 (853)
Q Consensus 522 ~~~~~~la~chsl~~~~~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~-~~~~~ 600 (853)
.+.+. ++.+++.. ....|||+|.|+++++...-. .. ....++.++++||+|.+|||+++++. +++++
T Consensus 399 ~~~l~-~a~l~s~~---~~~~~~p~e~All~~a~~~~~-~~-------~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~ 466 (903)
T PRK15122 399 ERVLQ-LAWLNSFH---QSGMKNLMDQAVVAFAEGNPE-IV-------KPAGYRKVDELPFDFVRRRLSVVVEDAQGQHL 466 (903)
T ss_pred HHHHH-HHHHhCCC---CCCCCChHHHHHHHHHHHcCc-hh-------hhhcCceEEEeeeCCCcCEEEEEEEcCCCcEE
Confidence 12222 22221211 134799999999998754210 00 01245678899999999999999987 56788
Q ss_pred EEEcCcHHHHHHhhccC---------C----hhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceee
Q 003049 601 AFVKGAPETIQDRLTDL---------P----SSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAG 667 (853)
Q Consensus 601 ~~~KGapE~i~~~~~~i---------p----~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G 667 (853)
+++|||||.++++|..+ + +.+.+..+.++++|+||+++|||.++..+. ....++..|+||+|+|
T Consensus 467 ~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~---~~~~~~~~e~~l~~lG 543 (903)
T PRK15122 467 LICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGES---RAQYSTADERDLVIRG 543 (903)
T ss_pred EEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCcccc---ccccccccccCcEEEE
Confidence 99999999999999642 2 235566788999999999999998864221 1123345689999999
Q ss_pred EeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhh
Q 003049 668 FAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKE 747 (853)
Q Consensus 668 ~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (853)
+++|+||+|||++++|++|+++||+|+|+||||+.||.+||+++||...
T Consensus 544 li~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~~------------------------------- 592 (903)
T PRK15122 544 FLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEPG------------------------------- 592 (903)
T ss_pred EEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC-------------------------------
Confidence 9999999999999999999999999999999999999999999999521
Q ss_pred hccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEe
Q 003049 748 VEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVAL 827 (853)
Q Consensus 748 ~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl 827 (853)
-+++|.+++.+.+ +++.+.++++.||||++|+||.++|+.||+.|++|+|+|||+||+||||+|||||||
T Consensus 593 ---------~vi~G~el~~~~~-~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAm 662 (903)
T PRK15122 593 ---------EPLLGTEIEAMDD-AALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISV 662 (903)
T ss_pred ---------CccchHhhhhCCH-HHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEe
Confidence 2578999998876 678899999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcCcccccccccccccCCccC
Q 003049 828 LNAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
++|+|+ +++++|.++.+|+|.+|
T Consensus 663 g~gtdv--AkeaADiVLldd~f~~I 685 (903)
T PRK15122 663 DSGADI--AKESADIILLEKSLMVL 685 (903)
T ss_pred CcccHH--HHHhcCEEEecCChHHH
Confidence 999885 89999999999999865
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-97 Score=916.52 Aligned_cols=647 Identities=22% Similarity=0.264 Sum_probs=494.8
Q ss_pred CCccccccccc--cCCCCcHHHHHHHHHhcCCcccccCCc-cHHHHHHHHhhchhHHHHHhhhhh-hcch----------
Q 003049 151 PTKETFGYYLK--CTGHSTEAKIAVATEKWGRNVFEYPQP-TFQKLMKENCMEPFFVFQVFCVGL-WCLD---------- 216 (853)
Q Consensus 151 ~~~~~~~~~~~--~~GLs~~~~~~~~~~~yG~N~~~~~~~-~~~~l~~~~~~~pf~vf~i~~~~l-w~~~---------- 216 (853)
+.++.++.+.. .+||+++ |+++|+++||+|+++.+.+ ++|.+|.+++++||.+.++++.++ ++..
T Consensus 21 ~~~~~~~~l~t~~~~GLs~~-e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~ 99 (997)
T TIGR01106 21 SLDELERKYGTDLSKGLSAA-RAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEP 99 (997)
T ss_pred CHHHHHHHhCcCcccCCCHH-HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCc
Confidence 44455666654 4699997 9999999999999987654 699999999999998888777666 3321
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCce
Q 003049 217 --EYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVR-VDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKS 293 (853)
Q Consensus 217 --~y~~~s~~~l~~lv~~~~~~~~~~~k~~~~l~~m~-~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~ 293 (853)
.+|+.++++++++++......+|+.|+.+.++++. ..|.+++|+|||++++|+++||||||+|.|++|+ .
T Consensus 100 ~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd-------~ 172 (997)
T TIGR01106 100 QNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGD-------R 172 (997)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCC-------E
Confidence 35777776666666666667778777766666643 3467899999999999999999999999999988 9
Q ss_pred eecceeeecce-eEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEE
Q 003049 294 VPADMLILGGS-AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVL 372 (853)
Q Consensus 294 vPaD~ill~G~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~ 372 (853)
|||||+|++|+ +.||||+|||||.|+.|.+... .+.. .+.+|++|+||.|+ +|.+.++|+
T Consensus 173 IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~--~~~~----~~~~n~l~~Gt~v~-------------~G~~~~~V~ 233 (997)
T TIGR01106 173 IPADLRIISAQGCKVDNSSLTGESEPQTRSPEFT--HENP----LETRNIAFFSTNCV-------------EGTARGIVV 233 (997)
T ss_pred EeeeEEEEEccCcEEEccccCCCCCceeccCCCc--ccCc----cccCCeEEeccEee-------------eeeEEEEEE
Confidence 99999999996 7999999999999999976321 1111 14578999999999 689999999
Q ss_pred eeCcccchhHHHHHhccccccCCcchhhHHHHHHHHHHHH----HHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCC
Q 003049 373 RTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFA----VIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPP 448 (853)
Q Consensus 373 ~tG~~T~~g~l~r~i~~~~~~~~~~~~~~~~fi~~ll~~a----i~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~ 448 (853)
+||.+|..|++.+.+....++.++.++....+...+..++ ++.+++++.. +..+...+..++.++++++||
T Consensus 234 ~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~v~v~~iP~ 308 (997)
T TIGR01106 234 NTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLIL-----GYTWLEAVIFLIGIIVANVPE 308 (997)
T ss_pred EccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCHHHHHHHHHHHHhhcCCc
Confidence 9999999999999876655555665554444443333332 2222222222 234555677778888888999
Q ss_pred CchHHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCC---ccccc-----cCC-
Q 003049 449 ELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA---ELEDD-----MTK- 519 (853)
Q Consensus 449 ~Lp~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~---~~~~~-----~~~- 519 (853)
+||++++++...+..+|+|++++++++.++|.+|++|++|||||||||+|+|+|.+++..+.. +.... ...
T Consensus 309 ~L~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (997)
T TIGR01106 309 GLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKS 388 (997)
T ss_pred cchHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcc
Confidence 999999999999999999999999999999999999999999999999999999998753211 00000 000
Q ss_pred CC--HHHHHHHHHhccceeeC---------CcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCc
Q 003049 520 VP--VRTQEILASCHALVFVD---------NKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKR 588 (853)
Q Consensus 520 ~~--~~~~~~la~chsl~~~~---------~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~kr 588 (853)
.. .....+++.||+....+ ....|||+|.|+++++.+...... .....+++++.+||+|++||
T Consensus 389 ~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~------~~~~~~~~v~~~pF~s~rK~ 462 (997)
T TIGR01106 389 SATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVM------EMRERNPKVVEIPFNSTNKY 462 (997)
T ss_pred cHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHH------HHHhhCceeEEeccCCCCce
Confidence 01 13455678898755432 135799999999998764321110 01234677889999999999
Q ss_pred eEEEEEeC----CEEEEEEcCcHHHHHHhhccC-------------ChhHHHHHHHHHhccceEEEEEeeeCCCCChhhh
Q 003049 589 MSVVVRVQ----EEFFAFVKGAPETIQDRLTDL-------------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDA 651 (853)
Q Consensus 589 msvi~~~~----~~~~~~~KGapE~i~~~~~~i-------------p~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~ 651 (853)
|++++... +++++++|||||.|+++|+.+ ++.+.+.+++|+++|+||+|+|||.++..+..+.
T Consensus 463 m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~ 542 (997)
T TIGR01106 463 QLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEG 542 (997)
T ss_pred EEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCccccccc
Confidence 99988642 368899999999999999532 2346777889999999999999999875322111
Q ss_pred hhhcHH---hhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCc
Q 003049 652 RSLHRD---EVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGK 728 (853)
Q Consensus 652 ~~~~r~---~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~ 728 (853)
...+++ ..|+||+|+|+++++||+|+|++++|++|+++|++++|+|||++.||.++|+++||++++....
T Consensus 543 ~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~------- 615 (997)
T TIGR01106 543 FQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETV------- 615 (997)
T ss_pred ccccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccch-------
Confidence 112222 3489999999999999999999999999999999999999999999999999999985421100
Q ss_pred eeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccc--eEEEeeChhhHHHHHHHHHHcCCEEE
Q 003049 729 VYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYV--KVFARVAPEQKELILTTFKAVGRMTL 806 (853)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~--~VfAr~sP~qK~~iV~~Lq~~g~~v~ 806 (853)
.++++. ....... ........++++|.+++.+.+ +++.+++.++ .||||++|+||.+||+.||+.|++|+
T Consensus 616 ----~~i~~~--~~~~~~~-~~~~~~~~~vi~G~~l~~l~~-~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~ 687 (997)
T TIGR01106 616 ----EDIAAR--LNIPVSQ-VNPRDAKACVVHGSDLKDMTS-EQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVA 687 (997)
T ss_pred ----hhhhhh--ccccccc-cccccccceEEEhHHhhhCCH-HHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEE
Confidence 000000 0000000 000122358999999999876 4677777765 49999999999999999999999999
Q ss_pred EEcCCcccHHHHHhCCceEEec-cCCCcCcccccccccccccCCccC
Q 003049 807 MCGDGTNDVGALKQAHVGVALL-NAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 807 m~GDG~ND~~ALk~AdVGIAl~-~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
|+|||+||+||||+|||||||| +|+|+ +++++|.++.+|+|.+|
T Consensus 688 ~~GDG~ND~paLk~AdVGiamg~~G~~v--ak~aADivL~dd~f~~I 732 (997)
T TIGR01106 688 VTGDGVNDSPALKKADIGVAMGIAGSDV--SKQAADMILLDDNFASI 732 (997)
T ss_pred EECCCcccHHHHhhCCcceecCCcccHH--HHHhhceEEecCCHHHH
Confidence 9999999999999999999999 68886 78899999999999875
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-96 Score=884.52 Aligned_cols=571 Identities=23% Similarity=0.272 Sum_probs=464.1
Q ss_pred CCCcHHHHHHHHHhcCCcccccCCccHHHHHHHHhhchhHHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003049 164 GHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKT 243 (853)
Q Consensus 164 GLs~~~~~~~~~~~yG~N~~~~~~~~~~~l~~~~~~~pf~vf~i~~~~lw~~~~y~~~s~~~l~~lv~~~~~~~~~~~k~ 243 (853)
|||++ |+++|+++||+|++..+.+++|.+|.+++.+||.++++++.++.+....|..++++++++++......+|++++
T Consensus 1 GLs~~-ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~~~~~~~~i~~~~~i~~~i~~~qe~~a 79 (755)
T TIGR01647 1 GLTSA-EAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALENWVDFVIILGLLLLNATIGFIEENKA 79 (755)
T ss_pred CcCHH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhhcchhhhhhhhhhhHHHHHHHHHHHHHH
Confidence 89987 99999999999999987788899999999999977666655554444456666666666666666677777776
Q ss_pred HHHHHhhh-cCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeecce-eEEeeccCCCCcccccc
Q 003049 244 LTEIRRVR-VDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGS-AIVNEAILTGESTPQWK 321 (853)
Q Consensus 244 ~~~l~~m~-~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G~-~~VdES~LTGES~Pv~K 321 (853)
.+.++++. ..|.+++|+|||+|++|+++||+|||+|.|++|+ +|||||+|++|+ +.||||+|||||.|+.|
T Consensus 80 ~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd-------~IPaDg~vi~g~~~~VDeS~LTGES~PV~K 152 (755)
T TIGR01647 80 GNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGD-------IVPADCRLFEGDYIQVDQAALTGESLPVTK 152 (755)
T ss_pred HHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCC-------EEeceEEEEecCceEEEcccccCCccceEe
Confidence 66665543 3467899999999999999999999999999988 999999999997 99999999999999999
Q ss_pred ccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHHHHHhccccccCCcchhhH
Q 003049 322 VSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWES 401 (853)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l~r~i~~~~~~~~~~~~~~ 401 (853)
.+ ++.+|+||.|. +|.+.++|++||.+|..|++.+.+...++..++.++..
T Consensus 153 ~~----------------~~~v~aGT~v~-------------~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~ 203 (755)
T TIGR01647 153 KT----------------GDIAYSGSTVK-------------QGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKIL 203 (755)
T ss_pred cc----------------CCeeeccCEEE-------------ccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHH
Confidence 75 67899999999 79999999999999999999998877665555655554
Q ss_pred HHHHHHH----HHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCchHHHHHHHHHHHHHHHhcceeccCCCC
Q 003049 402 GLFILFL----VVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFR 477 (853)
Q Consensus 402 ~~fi~~l----l~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~ 477 (853)
..+...+ ++++++.+++++... +.++...+..++.+++++|||+||+++++++..+..+|+|+|++++++..
T Consensus 204 ~~i~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~a 279 (755)
T TIGR01647 204 SKIGLFLIVLIGVLVLIELVVLFFGR----GESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTA 279 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHH
Confidence 4433333 333333222222211 24566778888999999999999999999999999999999999999999
Q ss_pred cccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHhccceeeCCcccCCHHHHHHHhhcCce
Q 003049 478 IPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWS 557 (853)
Q Consensus 478 i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~a~l~~~~~~ 557 (853)
+|.+|++|++|||||||||+|+|+|.+++..++. ..+.+.+...+.|.. +..+||+|+|+++++...
T Consensus 280 lE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~-------~~~~~~l~~a~~~~~------~~~~~pi~~Ai~~~~~~~ 346 (755)
T TIGR01647 280 IEELAGMDILCSDKTGTLTLNKLSIDEILPFFNG-------FDKDDVLLYAALASR------EEDQDAIDTAVLGSAKDL 346 (755)
T ss_pred HHhccCCcEEEecCCCccccCceEEEEEEecCCC-------CCHHHHHHHHHHhCC------CCCCChHHHHHHHHHHHh
Confidence 9999999999999999999999999999864321 011222333333321 346899999999875421
Q ss_pred eccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEe--CCEEEEEEcCcHHHHHHhhcc---CChhHHHHHHHHHhcc
Q 003049 558 YKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRV--QEEFFAFVKGAPETIQDRLTD---LPSSYIETYKKYTHQG 632 (853)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~--~~~~~~~~KGapE~i~~~~~~---ip~~~~~~~~~~~~~G 632 (853)
+. ....+++.+.+||+|.+|+|+++++. +++.++++|||||.++++|.. .++.+.+..++++++|
T Consensus 347 ---~~-------~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~~~~~~~~~G 416 (755)
T TIGR01647 347 ---KE-------ARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDELASRG 416 (755)
T ss_pred ---HH-------HHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHHHHHHHHhCC
Confidence 00 01235678899999999999999876 366788999999999999954 3567788889999999
Q ss_pred ceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcC
Q 003049 633 SRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVH 712 (853)
Q Consensus 633 ~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~g 712 (853)
+||+++|||+ .|++|+|+|+++|+||+|||++++|++||++|++++|+||||+.||.+||+++|
T Consensus 417 ~rvl~vA~~~----------------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lG 480 (755)
T TIGR01647 417 YRALGVARTD----------------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLG 480 (755)
T ss_pred CEEEEEEEEc----------------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC
Confidence 9999999972 257899999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHH
Q 003049 713 IVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKE 792 (853)
Q Consensus 713 I~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~ 792 (853)
|.+. +.+. +-..+|+.++.+.+ +++.++++++.||||++|+||.
T Consensus 481 I~~~---~~~~--------------------------------~~l~~~~~~~~~~~-~~~~~~~~~~~vfAr~~Pe~K~ 524 (755)
T TIGR01647 481 LGTN---IYTA--------------------------------DVLLKGDNRDDLPS-GELGEMVEDADGFAEVFPEHKY 524 (755)
T ss_pred CCCC---CcCH--------------------------------HHhcCCcchhhCCH-HHHHHHHHhCCEEEecCHHHHH
Confidence 9642 0000 00122333333332 5678888899999999999999
Q ss_pred HHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccccCCccC
Q 003049 793 LILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 793 ~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
++|+.||+.|++|+|+|||+||+||||+|||||||++|+|. +++++|.++.+++|.+|
T Consensus 525 ~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~~gtdv--AkeaADivLl~d~l~~I 582 (755)
T TIGR01647 525 EIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDA--ARSAADIVLTEPGLSVI 582 (755)
T ss_pred HHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEecCCcHH--HHHhCCEEEEcCChHHH
Confidence 99999999999999999999999999999999999998885 89999999999999765
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-95 Score=895.93 Aligned_cols=611 Identities=21% Similarity=0.283 Sum_probs=491.8
Q ss_pred CCCccccccccc--cCCCCcHHHHHHHHHhcCCcccccCC-ccHHHHHHHHh-hchhHHHHHhhhhhhcchhhHHHHHHH
Q 003049 150 YPTKETFGYYLK--CTGHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENC-MEPFFVFQVFCVGLWCLDEYWYYSLFT 225 (853)
Q Consensus 150 ~~~~~~~~~~~~--~~GLs~~~~~~~~~~~yG~N~~~~~~-~~~~~l~~~~~-~~pf~vf~i~~~~lw~~~~y~~~s~~~ 225 (853)
.+.++.++.++. .+||++++|+++|+++||+|+++.|. +++|.+|++++ .+||+++++++++++++.+.|..++++
T Consensus 7 ~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g~~~~~~~i 86 (884)
T TIGR01522 7 LSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMGNIDDAVSI 86 (884)
T ss_pred CCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHcchhhHHHH
Confidence 345556677764 46999434999999999999999875 68999999999 899999999999888877777777766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh-cCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeecce
Q 003049 226 LFMLFMFESTMAKSRLKTLTEIRRVR-VDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGS 304 (853)
Q Consensus 226 l~~lv~~~~~~~~~~~k~~~~l~~m~-~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G~ 304 (853)
++++++......+|++++.+.++++. ..|.+++|+|||++++|+++||||||+|.+++|+ .|||||+|++|+
T Consensus 87 ~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd-------~IPaDg~ii~g~ 159 (884)
T TIGR01522 87 TLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGD-------RVPADLRIVEAV 159 (884)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCC-------EEeeeEEEEEcC
Confidence 66666555666667776666666643 3467899999999999999999999999999988 999999999995
Q ss_pred -eEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHH
Q 003049 305 -AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKL 383 (853)
Q Consensus 305 -~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l 383 (853)
+.||||+|||||.|+.|.+.+.... ......+++|.+|+||.|. +|.+.++|++||.+|..|++
T Consensus 160 ~l~VDES~LTGES~pv~K~~~~~~~~--~~~~~~~~~n~v~~GT~v~-------------~G~~~~~V~~tG~~T~~gki 224 (884)
T TIGR01522 160 DLSIDESNLTGETTPVSKVTAPIPAA--TNGDLAERSNIAFMGTLVR-------------CGHGKGIVVGTGSNTEFGAV 224 (884)
T ss_pred ceEEEcccccCCCcceeccccccccc--ccccccccCceEEeCCEEE-------------eeeEEEEEEEecCccHHHHH
Confidence 8999999999999999987432111 1112236789999999998 69999999999999999999
Q ss_pred HHHhccccccCCcchhhHHHHHHHHHHHH----HHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCchHHHHHHHH
Q 003049 384 MRTILFSTERVTANSWESGLFILFLVVFA----VIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVN 459 (853)
Q Consensus 384 ~r~i~~~~~~~~~~~~~~~~fi~~ll~~a----i~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp~~lslav~ 459 (853)
.+.+....+.+++.++....+...+..++ ++.++..|.. +.++...+..++.+++++|||+||+++++++.
T Consensus 225 ~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~ 299 (884)
T TIGR01522 225 FKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWFQ-----GKDWLEMFTISVSLAVAAIPEGLPIIVTVTLA 299 (884)
T ss_pred HHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCHHHHHHHHHHHHHHHccchHHHHHHHHHH
Confidence 99988766666766655444433222221 1112222222 23456778888899999999999999999999
Q ss_pred HHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCc-cc-----cccC-----------CCC-
Q 003049 460 TSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAE-LE-----DDMT-----------KVP- 521 (853)
Q Consensus 460 ~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~-~~-----~~~~-----------~~~- 521 (853)
.++.+|+|++++++++..+|.+|++|++|||||||||+|+|+|.+++..++.. .. .... ..+
T Consensus 300 ~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (884)
T TIGR01522 300 LGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTV 379 (884)
T ss_pred HHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCH
Confidence 99999999999999999999999999999999999999999999997543210 00 0000 001
Q ss_pred --HHHHHHHHHhccceee--CCcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEe--
Q 003049 522 --VRTQEILASCHALVFV--DNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRV-- 595 (853)
Q Consensus 522 --~~~~~~la~chsl~~~--~~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~-- 595 (853)
...+...+.||+.... +++..|||+|+|+++++... +.+. ....++.++++||+|++|||+++++.
T Consensus 380 ~~~~~l~~~~l~~~~~~~~~~~~~~g~p~e~All~~~~~~-~~~~-------~~~~~~~~~~~pF~s~~k~m~v~~~~~~ 451 (884)
T TIGR01522 380 AVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKF-GLDD-------LRETYIRVAEVPFSSERKWMAVKCVHRQ 451 (884)
T ss_pred HHHHHHHHHhhhCCCeecCCCCCcCCChHHHHHHHHHHHc-CcHh-------HHhhCcEEeEeCCCCCCCeEEEEEEEcC
Confidence 1233455678876443 24677999999999986432 1000 01246788999999999999999887
Q ss_pred CCEEEEEEcCcHHHHHHhhccC----------C----hhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhc
Q 003049 596 QEEFFAFVKGAPETIQDRLTDL----------P----SSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVEN 661 (853)
Q Consensus 596 ~~~~~~~~KGapE~i~~~~~~i----------p----~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~ 661 (853)
++++++++|||||.|+.+|... . +.+.+..++|+++|+||+++|||.+ +.
T Consensus 452 ~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~----------------~~ 515 (884)
T TIGR01522 452 DRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE----------------KG 515 (884)
T ss_pred CCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC----------------CC
Confidence 5678999999999999999531 1 2456677889999999999999875 35
Q ss_pred CcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCccccc
Q 003049 662 GLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKI 741 (853)
Q Consensus 662 dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~ 741 (853)
+|+|+|+++|+||+|||++++|++|+++|++++|+|||++.||.++|+++||...
T Consensus 516 ~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~------------------------- 570 (884)
T TIGR01522 516 QLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSK------------------------- 570 (884)
T ss_pred CeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC-------------------------
Confidence 8999999999999999999999999999999999999999999999999999743
Q ss_pred ccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhC
Q 003049 742 QYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQA 821 (853)
Q Consensus 742 ~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~A 821 (853)
...+++|++++.+.+ +++.+++.++.||||++|+||..+|+.||+.|+.|+|+|||+||+||||+|
T Consensus 571 -------------~~~~v~g~~l~~~~~-~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~A 636 (884)
T TIGR01522 571 -------------TSQSVSGEKLDAMDD-QQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLA 636 (884)
T ss_pred -------------CCceeEhHHhHhCCH-HHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhC
Confidence 112578999988765 678888999999999999999999999999999999999999999999999
Q ss_pred CceEEec-cCCCcCcccccccccccccCCccC
Q 003049 822 HVGVALL-NAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 822 dVGIAl~-~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
||||||| +|++. ++.++|..+.+++|.+|
T Consensus 637 dVGia~g~~g~~v--a~~aaDivl~dd~~~~i 666 (884)
T TIGR01522 637 DIGVAMGQTGTDV--AKEAADMILTDDDFATI 666 (884)
T ss_pred CeeEecCCCcCHH--HHHhcCEEEcCCCHHHH
Confidence 9999998 57774 77889999999998764
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-94 Score=808.44 Aligned_cols=611 Identities=22% Similarity=0.293 Sum_probs=483.9
Q ss_pred cCCCCc-HHHHHHHHHhcCCcccccCC-ccHHHHHHHHhhchhHHHHHhhhhhhcc--------hhhHHHHHHHHHHH--
Q 003049 162 CTGHST-EAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGLWCL--------DEYWYYSLFTLFML-- 229 (853)
Q Consensus 162 ~~GLs~-~~~~~~~~~~yG~N~~~~~~-~~~~~l~~~~~~~pf~vf~i~~~~lw~~--------~~y~~~s~~~l~~l-- 229 (853)
..|++. ++++.+|++.||.|.++.++ ++|+.+.+|.+.+...+++.+|.++.+. .+.||.+..+++.+
T Consensus 115 ~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~ 194 (1034)
T KOG0204|consen 115 NEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVIL 194 (1034)
T ss_pred ccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEE
Confidence 468876 34899999999999998765 4899999999999988777766655432 34588776655432
Q ss_pred -HHHHHHHHHHHHHHHHHHHhhhcCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeecc-eeEE
Q 003049 230 -FMFESTMAKSRLKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGG-SAIV 307 (853)
Q Consensus 230 -v~~~~~~~~~~~k~~~~l~~m~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G-~~~V 307 (853)
++..+..-|++.+..+.|++.. .+.++.|+|||+.++|+..|||+|||+.++.|+ .|||||++++| ++.+
T Consensus 195 VV~VtA~nDy~qe~QF~~L~~~k-~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GD-------qvPADGvli~gn~L~i 266 (1034)
T KOG0204|consen 195 VVLVTAVNDYRQELQFRKLQKEK-RNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGD-------QVPADGVLIQGNSLKI 266 (1034)
T ss_pred EEEEeecchhHHhhhhhhhhhhh-hceEEEEEECCEEEEEEEeeeeeccEEEeecCC-------ccccceEEEeccceeE
Confidence 2334555666666666666432 347899999999999999999999999999987 99999999999 6899
Q ss_pred eeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHHHHHh
Q 003049 308 NEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTI 387 (853)
Q Consensus 308 dES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l~r~i 387 (853)
|||+|||||.++.|.+ +++.+|++||+++ +|.+.++|+.+|.+|..|+++.++
T Consensus 267 DESSlTGESd~v~k~~--------------~~dPfLlSGTkv~-------------eGsgkMlVTaVGmnt~wG~~m~~l 319 (1034)
T KOG0204|consen 267 DESSLTGESDHVQKSL--------------DKDPFLLSGTKVM-------------EGSGKMLVTAVGMNTQWGIIMTLL 319 (1034)
T ss_pred ecccccCCCcceeccC--------------CCCCeEeecceee-------------cCcceEEEEEeeecchHhhHHHhh
Confidence 9999999999999975 2467999999999 899999999999999999999988
Q ss_pred ccccccCCcchhhHHHHHH----HHHHHHHHHHhhh----hhhcccCCCc-----------hhhHHHHHhheeeEeecCC
Q 003049 388 LFSTERVTANSWESGLFIL----FLVVFAVIAAGYV----LKKGMEDPTR-----------SKYKLFLSCSLIITSVIPP 448 (853)
Q Consensus 388 ~~~~~~~~~~~~~~~~fi~----~ll~~ai~~~~~~----~~~~~~~~~~-----------~~~~~~l~~~~ii~~~vP~ 448 (853)
....+..++.+........ +-+.+|.+.++.+ +.......++ .+.+.|..++.+++.+||+
T Consensus 320 ~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPE 399 (1034)
T KOG0204|consen 320 GAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPE 399 (1034)
T ss_pred hcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCC
Confidence 7776666766543322211 1122222222111 1111111011 1234567788899999999
Q ss_pred CchHHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCcccccc--CCCCHHHHH
Q 003049 449 ELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDM--TKVPVRTQE 526 (853)
Q Consensus 449 ~Lp~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~--~~~~~~~~~ 526 (853)
+||++++++.++|+.+|.|.+.+++...+.|++|..+++|.|||||||.|+|+|...+........... +.+|.....
T Consensus 400 GLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ 479 (1034)
T KOG0204|consen 400 GLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLD 479 (1034)
T ss_pred CccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHH
Confidence 999999999999999999999999999999999999999999999999999999987765443221111 346655443
Q ss_pred HHH------HhccceeeC-C----cccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEe
Q 003049 527 ILA------SCHALVFVD-N----KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRV 595 (853)
Q Consensus 527 ~la------~chsl~~~~-~----~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~ 595 (853)
++- ++.++..-+ | +.+|+|.|+|+|.+... ++.+.... +....+.+.+||+|.+|||+++++.
T Consensus 480 ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~-LG~~~~~~-----R~e~~v~kv~~FNS~kK~~gvvi~~ 553 (1034)
T KOG0204|consen 480 LLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLK-LGMDFQDV-----RPEEKVVKVYPFNSVKKRMGVVIKL 553 (1034)
T ss_pred HHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHH-hCcchHhh-----cchhheeEEeccCcccceeeEEEEc
Confidence 332 333333322 2 58999999999987532 33322111 1456789999999999999999997
Q ss_pred CCEE-EEEEcCcHHHHHHhhccC--------------ChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhh
Q 003049 596 QEEF-FAFVKGAPETIQDRLTDL--------------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVE 660 (853)
Q Consensus 596 ~~~~-~~~~KGapE~i~~~~~~i--------------p~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E 660 (853)
.++. ++++|||+|.++.+|..+ ...+++.++.|+.+|+|++|+|||++.....++.+.-+.+..+
T Consensus 554 ~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~ 633 (1034)
T KOG0204|consen 554 PDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPE 633 (1034)
T ss_pred CCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCC
Confidence 4433 499999999999999653 1357788999999999999999999754311111222235678
Q ss_pred cCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccc
Q 003049 661 NGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEK 740 (853)
Q Consensus 661 ~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~ 740 (853)
.+|+++|+++++||+|||++++|+.|++||+.|.|+||||..||++||++|||.+++
T Consensus 634 ~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~----------------------- 690 (1034)
T KOG0204|consen 634 GGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPG----------------------- 690 (1034)
T ss_pred CCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCC-----------------------
Confidence 899999999999999999999999999999999999999999999999999999641
Q ss_pred cccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHh
Q 003049 741 IQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQ 820 (853)
Q Consensus 741 ~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~ 820 (853)
...++++|.+|+.+.+ +++.+++++.+|+||.||.||..+|+.|+++|++|+.+|||+||+||||.
T Consensus 691 -------------~d~~~lEG~eFr~~s~-ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALke 756 (1034)
T KOG0204|consen 691 -------------GDFLALEGKEFRELSQ-EERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKE 756 (1034)
T ss_pred -------------CccceecchhhhhcCH-HHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhh
Confidence 1357999999998877 68899999999999999999999999999999999999999999999999
Q ss_pred CCceEEec-cCCCcCcccccccccccccCCccC
Q 003049 821 AHVGVALL-NAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 821 AdVGIAl~-~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
||||.||| .|||+ |+.++|+++.||||.||
T Consensus 757 ADVGlAMGIaGTeV--AKEaSDIIi~DDNFssI 787 (1034)
T KOG0204|consen 757 ADVGLAMGIAGTEV--AKEASDIIILDDNFSSI 787 (1034)
T ss_pred cccchhccccchhh--hhhhCCeEEEcCchHHH
Confidence 99999999 88997 99999999999999986
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-89 Score=836.93 Aligned_cols=599 Identities=23% Similarity=0.303 Sum_probs=461.7
Q ss_pred HHHHhhchhHHHHHhhhhhhcch----------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCceEEEEEC
Q 003049 194 MKENCMEPFFVFQVFCVGLWCLD----------EYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVR-VDNQTIMVHRC 262 (853)
Q Consensus 194 ~~~~~~~pf~vf~i~~~~lw~~~----------~y~~~s~~~l~~lv~~~~~~~~~~~k~~~~l~~m~-~~~~~v~V~R~ 262 (853)
+++++.+|+.++.+++.++.+.. ..|+.++++++++++......+|++|+.+.++++. ..+.+++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 35788999988877776665443 24777777777777777777888877766666653 34678999999
Q ss_pred CEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeecce-eEEeeccCCCCccccccccccCCCCCccccccCCCCe
Q 003049 263 GKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGS-AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSH 341 (853)
Q Consensus 263 g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~ 341 (853)
|++++|+++||||||+|.+++|+ .|||||+|++|+ +.||||+|||||.|+.|.+.+..+.+ ....+++|
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd-------~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~---~~~~~~~n 150 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGD-------KVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDER---AVNQDKKN 150 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCC-------EeeccEEEEEecceEEEcccccCCCCcccccccccCccc---cCcccccc
Confidence 99999999999999999999988 999999999995 99999999999999999864321111 11235679
Q ss_pred EEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHHHHHhccccccCCcchhhHHHHHHHHHH----HHHHHHh
Q 003049 342 VLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVV----FAVIAAG 417 (853)
Q Consensus 342 ~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l~r~i~~~~~~~~~~~~~~~~fi~~ll~----~ai~~~~ 417 (853)
++|+||.|. +|.+.++|++||.+|..|++.+.+...+++.++.++....+...+.. ++++.++
T Consensus 151 ~l~~GT~v~-------------~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~ 217 (917)
T TIGR01116 151 MLFSGTLVV-------------AGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWV 217 (917)
T ss_pred eeeeCCEEe-------------cceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 69999999999999999999999888777777776655444333222 2222222
Q ss_pred hhhhhccc-CCCchh----hHHHHHhheeeEeecCCCchHHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCC
Q 003049 418 YVLKKGME-DPTRSK----YKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKT 492 (853)
Q Consensus 418 ~~~~~~~~-~~~~~~----~~~~l~~~~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKT 492 (853)
+.+..... .....+ ...+..++.++++++|++||++++++...+..+|+|++++++++..+|.+|++|++|||||
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKT 297 (917)
T TIGR01116 218 INIGHFNDPALGGGWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKT 297 (917)
T ss_pred HHHHHhccccccchhHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCC
Confidence 11111000 001111 2334456778889999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCeEEEEEEecCCCc----------ccc-c----cCC-------C---CHHHHHHHHHhccceeeC----C--cc
Q 003049 493 GTLTSDDMEFRGVVGLSNAE----------LED-D----MTK-------V---PVRTQEILASCHALVFVD----N--KL 541 (853)
Q Consensus 493 GTLT~~~~~v~~i~~~~~~~----------~~~-~----~~~-------~---~~~~~~~la~chsl~~~~----~--~~ 541 (853)
||||+|+|+|.+++..++.. ... + ..+ . ......+++.||...... + +.
T Consensus 298 GTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~ 377 (917)
T TIGR01116 298 GTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEK 377 (917)
T ss_pred ccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceee
Confidence 99999999999997643210 000 0 000 0 122455678899765431 1 24
Q ss_pred cCCHHHHHHHhhcC---ceeccCc--cc-ccCC----CCCcceEEEEEecCCCCCCceEEEEEeCCEEEEEEcCcHHHHH
Q 003049 542 VGDPLEKAALKGID---WSYKSDE--KA-MPKR----GGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQ 611 (853)
Q Consensus 542 ~gdple~a~l~~~~---~~~~~~~--~~-~~~~----~~~~~~~i~~~~~F~s~~krmsvi~~~~~~~~~~~KGapE~i~ 611 (853)
.|||+|.|+++++. ....... .. .... .....+++++.+||+|++|||||+++.++++++++|||||.|+
T Consensus 378 ~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~~~~~~~~KGApe~il 457 (917)
T TIGR01116 378 VGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPSTGNKLFVKGAPEGVL 457 (917)
T ss_pred ccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeCCcEEEEEcCChHHHH
Confidence 69999999998753 1111100 00 0000 0123567899999999999999999987888999999999999
Q ss_pred HhhccC--------C------hhHHHHHHHHHh-ccceEEEEEeeeCCCCChh--hhhhhcHHhhhcCcceeeEeeecCC
Q 003049 612 DRLTDL--------P------SSYIETYKKYTH-QGSRVLALAFKSLPDMTVS--DARSLHRDEVENGLTFAGFAVFNCP 674 (853)
Q Consensus 612 ~~~~~i--------p------~~~~~~~~~~~~-~G~rvlala~k~l~~~~~~--~~~~~~r~~~E~dl~f~G~l~~~d~ 674 (853)
++|+.. | +.+.+..++|++ +|+||+|+|||.++..... ......++++|+||+|+|+++|+||
T Consensus 458 ~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dp 537 (917)
T TIGR01116 458 ERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDP 537 (917)
T ss_pred HhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCC
Confidence 999642 1 235667889999 9999999999998642211 0112345678999999999999999
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCc
Q 003049 675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDA 754 (853)
Q Consensus 675 lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (853)
+|++++++|++|+++|++++|+|||++.||.++|+++||..++.. .
T Consensus 538 lr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~----------------------------------v 583 (917)
T TIGR01116 538 PRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDED----------------------------------V 583 (917)
T ss_pred CchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCcc----------------------------------c
Confidence 999999999999999999999999999999999999999843110 0
Q ss_pred eeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcC
Q 003049 755 HDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPT 834 (853)
Q Consensus 755 ~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~ 834 (853)
....++|.+++.+.+ +++.+...++.||||++|+||.++|+.||+.|++|+|+|||+||+||||+|||||||++|++.
T Consensus 584 ~~~~~~g~~l~~~~~-~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g~g~~~- 661 (917)
T TIGR01116 584 TFKSFTGREFDEMGP-AKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEV- 661 (917)
T ss_pred cceeeeHHHHhhCCH-HHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECCCCcHH-
Confidence 134688999888765 456777888899999999999999999999999999999999999999999999999988875
Q ss_pred cccccccccccccCCccC
Q 003049 835 QSGNSSSEASKDENTKSV 852 (853)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~ 852 (853)
+++++|.++.+|+|.+|
T Consensus 662 -ak~aAD~vl~dd~f~~i 678 (917)
T TIGR01116 662 -AKEASDMVLADDNFATI 678 (917)
T ss_pred -HHHhcCeEEccCCHHHH
Confidence 78889999999999765
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-82 Score=791.59 Aligned_cols=638 Identities=21% Similarity=0.278 Sum_probs=446.8
Q ss_pred cCCcccccCCccH----HHHHHHHhhchhHHHHHhhhhhhcchh----hHHHHHHHHHHHH-HH---HHHHHHHHHHHHH
Q 003049 178 WGRNVFEYPQPTF----QKLMKENCMEPFFVFQVFCVGLWCLDE----YWYYSLFTLFMLF-MF---ESTMAKSRLKTLT 245 (853)
Q Consensus 178 yG~N~~~~~~~~~----~~l~~~~~~~pf~vf~i~~~~lw~~~~----y~~~s~~~l~~lv-~~---~~~~~~~~~k~~~ 245 (853)
|..|.+...+.++ +..|++|+..|+.++.++..++-+... .+...++.+++++ +. +....++|.++-
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d- 79 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRD- 79 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhH-
Confidence 5678887777654 478889999998776665555544321 2222233333222 22 222233333333
Q ss_pred HHHhhhcCCceEEEEEC-CEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeec-----ceeEEeeccCCCCcccc
Q 003049 246 EIRRVRVDNQTIMVHRC-GKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILG-----GSAIVNEAILTGESTPQ 319 (853)
Q Consensus 246 ~l~~m~~~~~~v~V~R~-g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~-----G~~~VdES~LTGES~Pv 319 (853)
+++ .+..++|+|+ |++++|+++||+|||+|.|++|| .||||++|++ |.|.||||+|||||.|+
T Consensus 80 --~~~--n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~-------~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~ 148 (1057)
T TIGR01652 80 --KEV--NNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDE-------RIPADLLLLSSSEPDGVCYVETANLDGETNLK 148 (1057)
T ss_pred --HHH--hCcEEEEECCCCcEEEeeeecccCCCEEEEcCCC-------cccceEEEEeccCCCceEEEEeeccCCeecce
Confidence 222 3468999997 89999999999999999999988 9999999997 77999999999999999
Q ss_pred ccccccCCCC----Cc------ccccc----------------------CCCCeEEEeceEEeecCCCCCCCCCCCCCcE
Q 003049 320 WKVSIMGRET----GE------KLSAR----------------------RDKSHVLFGGTKILQHTPDKTFPLKTPDGGC 367 (853)
Q Consensus 320 ~K~~~~~~~~----~~------~~~~~----------------------~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~ 367 (853)
.|.+.+.... ++ .+..+ -+..|+++.||.+.. .|++
T Consensus 149 ~k~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~n------------t~~~ 216 (1057)
T TIGR01652 149 LRQALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRN------------TDWV 216 (1057)
T ss_pred EeecchhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecC------------CCeE
Confidence 9987542110 00 00000 023466677777652 4899
Q ss_pred EEEEEeeCcccchhHHHHHhccccccCCcchhhHHHHHHHHHHHHHH----HHhh--hhhhcc-c-CC-----------C
Q 003049 368 LAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVI----AAGY--VLKKGM-E-DP-----------T 428 (853)
Q Consensus 368 ~~~V~~tG~~T~~g~l~r~i~~~~~~~~~~~~~~~~fi~~ll~~ai~----~~~~--~~~~~~-~-~~-----------~ 428 (853)
.|+|++||.+|..++ ....+..+.+..++....++.++++++++ ++++ +|.... . .. .
T Consensus 217 ~gvVvyTG~~Tk~~~---n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~ 293 (1057)
T TIGR01652 217 IGVVVYTGHDTKLMR---NATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAA 293 (1057)
T ss_pred EEEEEEEchhhhhhh---cCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccch
Confidence 999999999996655 33344455677776666665544433322 2221 121100 0 00 0
Q ss_pred chhhHHHHHhheeeEeecCCCchHHHHHHHHHHH------HHHHhc----ceeccCCCCcccCccccEEEeCCCCcccCC
Q 003049 429 RSKYKLFLSCSLIITSVIPPELPMELSIAVNTSL------IALARR----GIFCTEPFRIPFAGKVDMCCFDKTGTLTSD 498 (853)
Q Consensus 429 ~~~~~~~l~~~~ii~~~vP~~Lp~~lslav~~s~------~~l~k~----~I~~~~~~~i~~lG~vd~icfDKTGTLT~~ 498 (853)
......++.++.++..++|.+||+.++++..... .+|.++ ++.+++...+|.||+|+++|+|||||||+|
T Consensus 294 ~~~~~~~~~~~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N 373 (1057)
T TIGR01652 294 ANGFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQN 373 (1057)
T ss_pred hHHHHHHHHHHHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeee
Confidence 1122256778888899999999999998877776 567653 589999999999999999999999999999
Q ss_pred CeEEEEEEecCCC-----c--------ccc-----------c--------------c--C-CC---CHHHHHHHHHhccc
Q 003049 499 DMEFRGVVGLSNA-----E--------LED-----------D--------------M--T-KV---PVRTQEILASCHAL 534 (853)
Q Consensus 499 ~~~v~~i~~~~~~-----~--------~~~-----------~--------------~--~-~~---~~~~~~~la~chsl 534 (853)
+|+++++...+.. . ... . . . +. -.+...+++.||++
T Consensus 374 ~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v 453 (1057)
T TIGR01652 374 IMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTV 453 (1057)
T ss_pred eEEEEEEEECCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcc
Confidence 9999998642210 0 000 0 0 0 00 12345688999998
Q ss_pred eee--CCc------ccCCHHHHHHHhhc---CceeccCcc-----cccCCCCCcceEEEEEecCCCCCCceEEEEEeC-C
Q 003049 535 VFV--DNK------LVGDPLEKAALKGI---DWSYKSDEK-----AMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQ-E 597 (853)
Q Consensus 535 ~~~--~~~------~~gdple~a~l~~~---~~~~~~~~~-----~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~-~ 597 (853)
... ++. ..|+|.|.|+++++ ++.+...+. .....+....+++++.+||+|++|||||+++.+ +
T Consensus 454 ~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~ 533 (1057)
T TIGR01652 454 VPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDG 533 (1057)
T ss_pred cccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCC
Confidence 654 211 15899999999875 454432211 111223345799999999999999999999984 4
Q ss_pred EEEEEEcCcHHHHHHhhccC----ChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhh-----------------hhcH
Q 003049 598 EFFAFVKGAPETIQDRLTDL----PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDAR-----------------SLHR 656 (853)
Q Consensus 598 ~~~~~~KGapE~i~~~~~~i----p~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~-----------------~~~r 656 (853)
++++++|||||.|.++|... ++.+.+.+++|+++|+||+++|||.+++.+..++. ...+
T Consensus 534 ~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~ 613 (1057)
T TIGR01652 534 RIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVA 613 (1057)
T ss_pred eEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Confidence 68999999999999999753 35677889999999999999999999764332221 0112
Q ss_pred HhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeE--EEccCCCCceeEeec
Q 003049 657 DEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVL--ILCPVKNGKVYEWVS 734 (853)
Q Consensus 657 ~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~--il~~~~~~~~~~~~~ 734 (853)
+++|+||+|+|+++++||||+|++++|+.|++|||++||+|||+++||++||++|||++++.. +++.+... .+..
T Consensus 614 ~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~---~~~~ 690 (1057)
T TIGR01652 614 ESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLD---ATRS 690 (1057)
T ss_pred HHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchh---hhHH
Confidence 568999999999999999999999999999999999999999999999999999999975432 22221100 0000
Q ss_pred CCccccccc----chhhhccccCceeEEEehhhhHHhhcch---hHHhhcccc--eEEEeeChhhHHHHHHHHHHc-CCE
Q 003049 735 PDETEKIQY----SEKEVEGLTDAHDLCIGGDCFEMLQQTS---AVLRVIPYV--KVFARVAPEQKELILTTFKAV-GRM 804 (853)
Q Consensus 735 ~~~~~~~~~----~~~~~~~~~~~~~l~itG~~l~~l~~~~---~~~~~~~~~--~VfAr~sP~qK~~iV~~Lq~~-g~~ 804 (853)
.++...... ..........++.++++|++++.+.+++ .+.+++.++ .||||++|+||.+||+.+|+. |++
T Consensus 691 ~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~ 770 (1057)
T TIGR01652 691 VEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKT 770 (1057)
T ss_pred HHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCe
Confidence 000000000 0000011134567899999999877643 456666655 499999999999999999998 999
Q ss_pred EEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccc
Q 003049 805 TLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKD 846 (853)
Q Consensus 805 v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~ 846 (853)
|+|+|||+||+||||+|||||++ .|++..+|..++|.++.+
T Consensus 771 vl~iGDG~ND~~mlk~AdVGIgi-~g~eg~qA~~aaD~~i~~ 811 (1057)
T TIGR01652 771 TLAIGDGANDVSMIQEADVGVGI-SGKEGMQAVMASDFAIGQ 811 (1057)
T ss_pred EEEEeCCCccHHHHhhcCeeeEe-cChHHHHHHHhhhhhhhh
Confidence 99999999999999999999988 466655788889998876
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-80 Score=724.02 Aligned_cols=455 Identities=20% Similarity=0.236 Sum_probs=360.0
Q ss_pred HHHHHHHhhhcCCceEE-EEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeecceeEEeeccCCCCccccc
Q 003049 242 KTLTEIRRVRVDNQTIM-VHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQW 320 (853)
Q Consensus 242 k~~~~l~~m~~~~~~v~-V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G~~~VdES~LTGES~Pv~ 320 (853)
+++++|+++.. +.+++ |.|||++++|++++|+|||+|.+++|| .|||||++++|.+.||||+|||||.|+.
T Consensus 92 ~~~~~L~~~~~-~~~a~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd-------~IPaDG~vieG~~~VDESaLTGES~PV~ 163 (673)
T PRK14010 92 AQANALRQTQT-EMKARRIKQDGSYEMIDASDLKKGHIVRVATGE-------QIPNDGKVIKGLATVDESAITGESAPVI 163 (673)
T ss_pred HHHHHHHcCCC-cceEEEEEeCCEEEEEEHHHcCCCCEEEECCCC-------cccCCeEEEEcceEEecchhcCCCCcee
Confidence 34455555432 22565 779999999999999999999999988 9999999999999999999999999999
Q ss_pred cccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHHHHHhccccccCCcchhh
Q 003049 321 KVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWE 400 (853)
Q Consensus 321 K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l~r~i~~~~~~~~~~~~~ 400 (853)
|++- +++ +.+|+||.|. +|.+.++|++||.+|..|++++.+..+++++++++..
T Consensus 164 K~~g------------~d~-~~V~aGT~v~-------------~G~~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~ 217 (673)
T PRK14010 164 KESG------------GDF-DNVIGGTSVA-------------SDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIA 217 (673)
T ss_pred ccCC------------Ccc-CeeecCceee-------------cceEEEEEEEecccCHHHHHHHHHhhccccCCHHHHH
Confidence 9861 122 3499999999 7999999999999999999999998777777777654
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCchHHHHHHHHHHHHHHHhcceeccCCCCccc
Q 003049 401 SGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 480 (853)
Q Consensus 401 ~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~i~~ 480 (853)
...+...+.+++++...+++..... ..+...+...+.++++++|++||..++++...++.+|+|+|++++++..+|.
T Consensus 218 l~~l~~~l~ii~l~~~~~~~~~~~~---~~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~ 294 (673)
T PRK14010 218 LFTLLMTLTIIFLVVILTMYPLAKF---LNFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVET 294 (673)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHH
Confidence 4333322222222211111111100 0112233344445556689999999999999999999999999999999999
Q ss_pred CccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHhccceeeCCcccCCHHHHHHHhhcCceecc
Q 003049 481 AGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKS 560 (853)
Q Consensus 481 lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~a~l~~~~~~~~~ 560 (853)
+|++|++|||||||||+|++.+..+.+.++. ...+.....+.|.. ...||+++|+++++... +.
T Consensus 295 lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~~--------~~~~ll~~a~~~~~-------~s~~P~~~AIv~~a~~~-~~ 358 (673)
T PRK14010 295 CGDVNVLILDKTGTITYGNRMADAFIPVKSS--------SFERLVKAAYESSI-------ADDTPEGRSIVKLAYKQ-HI 358 (673)
T ss_pred hhCCCEEEEeCCCcCCCCCeEEEEEEeCCCc--------cHHHHHHHHHHhcC-------CCCChHHHHHHHHHHHc-CC
Confidence 9999999999999999998888776643221 11122233333431 23599999999876421 00
Q ss_pred CcccccCCCCCcceEEEEEecCCCCCCceEEEEEeCCEEEEEEcCcHHHHHHhhc----cCChhHHHHHHHHHhccceEE
Q 003049 561 DEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLT----DLPSSYIETYKKYTHQGSRVL 636 (853)
Q Consensus 561 ~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~~~~~~~KGapE~i~~~~~----~ip~~~~~~~~~~~~~G~rvl 636 (853)
+. .....+..||++++|+|++.+ +++ .+.|||||.+.++|. .+|.++++..++++++|+|++
T Consensus 359 ~~----------~~~~~~~~pF~~~~k~~gv~~--~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l 424 (673)
T PRK14010 359 DL----------PQEVGEYIPFTAETRMSGVKF--TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPL 424 (673)
T ss_pred Cc----------hhhhcceeccccccceeEEEE--CCE--EEEECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCCeEE
Confidence 00 001123479999999999874 343 355999999999995 356677888889999999999
Q ss_pred EEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCC
Q 003049 637 ALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK 716 (853)
Q Consensus 637 ala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~ 716 (853)
+++. |++|+|++.|+||+|||++++|++||++|++++|+||||+.||.+||+++||.
T Consensus 425 ~v~~---------------------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~-- 481 (673)
T PRK14010 425 VVLE---------------------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD-- 481 (673)
T ss_pred EEEE---------------------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc--
Confidence 8753 67899999999999999999999999999999999999999999999999996
Q ss_pred CeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHH
Q 003049 717 PVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILT 796 (853)
Q Consensus 717 ~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~ 796 (853)
.+|||++|+||.++|+
T Consensus 482 ----------------------------------------------------------------~v~A~~~PedK~~iV~ 497 (673)
T PRK14010 482 ----------------------------------------------------------------RFVAECKPEDKINVIR 497 (673)
T ss_pred ----------------------------------------------------------------eEEcCCCHHHHHHHHH
Confidence 5899999999999999
Q ss_pred HHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccccCCccC
Q 003049 797 TFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 797 ~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
.||++|++|+|+|||+||+||||+|||||||++|++. +++++|.++.+++|.+|
T Consensus 498 ~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdv--AkeAADiVLldd~ls~I 551 (673)
T PRK14010 498 EEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGTMS--AKEAANLIDLDSNPTKL 551 (673)
T ss_pred HHHhCCCEEEEECCChhhHHHHHhCCEEEEeCCCCHH--HHHhCCEEEcCCCHHHH
Confidence 9999999999999999999999999999999999995 99999999999998765
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-80 Score=722.75 Aligned_cols=462 Identities=20% Similarity=0.237 Sum_probs=369.4
Q ss_pred HHHHHHHHHHHHHhhhc-CC-ceEEEEECCE-EEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeecceeEEeeccC
Q 003049 236 MAKSRLKTLTEIRRVRV-DN-QTIMVHRCGK-WVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAIL 312 (853)
Q Consensus 236 ~~~~~~k~~~~l~~m~~-~~-~~v~V~R~g~-~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G~~~VdES~L 312 (853)
..+++.|+.+.++.+.. .| .+++|+|||+ +++|++++|+|||+|.|++|| .|||||++++|.+.||||+|
T Consensus 83 e~~ae~ra~~~~~sL~~l~~~~~a~vir~g~~~~~V~~~eL~~GDiV~v~~Gd-------~IPaDG~vieG~a~VDESaL 155 (679)
T PRK01122 83 EALAEGRGKAQADSLRGAKKDTFARKLREPGAAEEVPATELRKGDIVLVEAGE-------IIPADGEVIEGVASVDESAI 155 (679)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEECCCEEEEEEHHHcCCCCEEEEcCCC-------EEEEEEEEEEccEEEEcccc
Confidence 34555555444444322 34 3699999988 999999999999999999988 99999999999999999999
Q ss_pred CCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHHHHHhccccc
Q 003049 313 TGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTE 392 (853)
Q Consensus 313 TGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l~r~i~~~~~ 392 (853)
||||.|+.|++- +..+.+|+||.|+ +|.+.++|+++|.+|..|++++.+...+.
T Consensus 156 TGES~PV~K~~G-------------~~~~~V~aGT~v~-------------~G~~~i~Vta~g~~S~lgki~~lve~a~~ 209 (679)
T PRK01122 156 TGESAPVIRESG-------------GDFSSVTGGTRVL-------------SDWIVIRITANPGESFLDRMIALVEGAKR 209 (679)
T ss_pred cCCCCceEeCCC-------------CccCeEEeceEEE-------------eeeEEEEEEEecccCHHHHHHHHHHhccc
Confidence 999999999861 1123499999999 69999999999999999999998887777
Q ss_pred cCCcchhhHHHHHHHHHH---HHHHHHh-hhhhhcccCCCchhhHHHHHhheeeEeecCCCchHHHHHHHHHHHHHHHhc
Q 003049 393 RVTANSWESGLFILFLVV---FAVIAAG-YVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARR 468 (853)
Q Consensus 393 ~~~~~~~~~~~fi~~ll~---~ai~~~~-~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp~~lslav~~s~~~l~k~ 468 (853)
++++++.....+...+.+ ++++..+ +.|+.+ .. ..+..++.+++++|||+|+..++++...++.+|.|+
T Consensus 210 ~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~~g-----~~--~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~ 282 (679)
T PRK01122 210 QKTPNEIALTILLAGLTIIFLLVVATLPPFAAYSG-----GA--LSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQA 282 (679)
T ss_pred cCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhC-----ch--HHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcC
Confidence 677765443332222111 1111111 112211 12 245666777888999999999998888999999999
Q ss_pred ceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHhccceeeCCcccCCHHHH
Q 003049 469 GIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEK 548 (853)
Q Consensus 469 ~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~ 548 (853)
|++++++..+|.+|++|++|||||||||+|+|.+..+++.++. .........+.|. ....||..+
T Consensus 283 gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~--------~~~~ll~~a~~~s-------~~s~hP~~~ 347 (679)
T PRK01122 283 NVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV--------TEEELADAAQLSS-------LADETPEGR 347 (679)
T ss_pred CeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC--------CHHHHHHHHHHhc-------CCCCCchHH
Confidence 9999999999999999999999999999999999998764331 0112222233332 123579999
Q ss_pred HHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEeCCEEEEEEcCcHHHHHHhhc----cCChhHHHH
Q 003049 549 AALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLT----DLPSSYIET 624 (853)
Q Consensus 549 a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~~~~~~~KGapE~i~~~~~----~ip~~~~~~ 624 (853)
|+++++....+... ....+...+.+||++.+++|++.. ++ ..+.|||||.+++.|. .+|+++++.
T Consensus 348 AIv~~a~~~~~~~~-------~~~~~~~~~~~pF~s~~~~~gv~~--~g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~ 416 (679)
T PRK01122 348 SIVVLAKQRFNLRE-------RDLQSLHATFVPFSAQTRMSGVDL--DG--REIRKGAVDAIRRYVESNGGHFPAELDAA 416 (679)
T ss_pred HHHHHHHhhcCCCc-------hhhccccceeEeecCcCceEEEEE--CC--EEEEECCHHHHHHHHHhcCCcChHHHHHH
Confidence 99987642111100 001134556789999988888754 33 4789999999999994 357788888
Q ss_pred HHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhH
Q 003049 625 YKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTA 704 (853)
Q Consensus 625 ~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA 704 (853)
.++++++|.|++++|+ |++|+|++.++||+|||++++|++||++|++++|+||||+.||
T Consensus 417 ~~~~a~~G~~~l~va~---------------------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA 475 (679)
T PRK01122 417 VDEVARKGGTPLVVAE---------------------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTA 475 (679)
T ss_pred HHHHHhCCCcEEEEEE---------------------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHH
Confidence 9999999999999996 5789999999999999999999999999999999999999999
Q ss_pred HHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEE
Q 003049 705 CYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFA 784 (853)
Q Consensus 705 ~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfA 784 (853)
.+||+++||. .+||
T Consensus 476 ~aIA~elGId------------------------------------------------------------------~v~A 489 (679)
T PRK01122 476 AAIAAEAGVD------------------------------------------------------------------DFLA 489 (679)
T ss_pred HHHHHHcCCc------------------------------------------------------------------EEEc
Confidence 9999999995 5899
Q ss_pred eeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccccCCccC
Q 003049 785 RVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 785 r~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
|++|+||.++|+.||+.|+.|+|+|||+||+||||+|||||||++|++. +++++|.++.+++|.++
T Consensus 490 ~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdv--AkeAADiVLldd~~s~I 555 (679)
T PRK01122 490 EATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAGNMVDLDSNPTKL 555 (679)
T ss_pred cCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHH--HHHhCCEEEeCCCHHHH
Confidence 9999999999999999999999999999999999999999999999995 99999999999998764
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-83 Score=713.95 Aligned_cols=651 Identities=22% Similarity=0.268 Sum_probs=500.3
Q ss_pred cCCCCccccccccc--cCCCCcHHHHHHHHHhcCCcccccCCc-cHHHHHHHHhhchhHHHHHhhhhhhcchhhHH----
Q 003049 148 LPYPTKETFGYYLK--CTGHSTEAKIAVATEKWGRNVFEYPQP-TFQKLMKENCMEPFFVFQVFCVGLWCLDEYWY---- 220 (853)
Q Consensus 148 ~~~~~~~~~~~~~~--~~GLs~~~~~~~~~~~yG~N~~~~~~~-~~~~l~~~~~~~pf~vf~i~~~~lw~~~~y~~---- 220 (853)
.+.|.++..+.|.. ++||+.+ ++.+++.+-|+|.+.+|+. +-|..|.+++++-|-+....+..+.++ .|.+
T Consensus 40 H~~~~~eL~~r~~t~~~~Glt~~-~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~-~y~~~~s~ 117 (1019)
T KOG0203|consen 40 HKLSVDELCERYGTSVSQGLTSQ-EAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFV-AYGIQAST 117 (1019)
T ss_pred ccCCHHHHHHHhcCChhhcccHH-HHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHH-HHhhhccc
Confidence 34566777777873 6899997 9999999999999998875 356778888877776554443333222 1211
Q ss_pred ---------H-HHHHHHHHHHHHHHHHHHHHHH---HHHHHhhhcCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCC
Q 003049 221 ---------Y-SLFTLFMLFMFESTMAKSRLKT---LTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQ 287 (853)
Q Consensus 221 ---------~-s~~~l~~lv~~~~~~~~~~~k~---~~~l~~m~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d 287 (853)
| ++++....++......+|..+. ++++++| .|+.++|+|||+...+.++|||+||+|.++.|+
T Consensus 118 ~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l--~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~Gd-- 193 (1019)
T KOG0203|consen 118 EDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNL--VPQQALVIRDGEKMTINAEELVVGDLVEVKGGD-- 193 (1019)
T ss_pred CCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhcc--chhhheeeecceeEEechhhcccccceeeccCC--
Confidence 1 1111111122223334555443 5666665 467899999999999999999999999999987
Q ss_pred CCCCceeecceeeecce-eEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCc
Q 003049 288 TGEDKSVPADMLILGGS-AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGG 366 (853)
Q Consensus 288 ~~~~~~vPaD~ill~G~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~ 366 (853)
+||||.+++++. +.||+|+|||||.|+...+.... +.. .+..|+-|.+|.++ +|.
T Consensus 194 -----rVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~--~~~----~Et~Ni~f~st~~v-------------eG~ 249 (1019)
T KOG0203|consen 194 -----RVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTH--ENP----LETRNIAFFSTNCV-------------EGT 249 (1019)
T ss_pred -----cccceeEEEEecceeEeccccccccCCccCCccccc--cCc----hhheeeeeeeeEEe-------------cce
Confidence 999999999995 89999999999999999774321 111 24588999999999 899
Q ss_pred EEEEEEeeCcccchhHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEeec
Q 003049 367 CLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVI 446 (853)
Q Consensus 367 ~~~~V~~tG~~T~~g~l~r~i~~~~~~~~~~~~~~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~v 446 (853)
+.++|++||.+|..|++......-....++..++...|+.++..+|+...+.++..+..- ++.+...+...+.++++.+
T Consensus 250 ~~givi~tGd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~-gy~~l~avv~~i~iivAnv 328 (1019)
T KOG0203|consen 250 GRGIVIATGDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALIL-GYEWLRAVVFLIGIIVANV 328 (1019)
T ss_pred EEEEEEecCCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhh-cchhHHHhhhhheeEEecC
Confidence 999999999999999998766555566778888888888888887777655554433322 4556677777899999999
Q ss_pred CCCchHHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCC---cc-------ccc
Q 003049 447 PPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA---EL-------EDD 516 (853)
Q Consensus 447 P~~Lp~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~---~~-------~~~ 516 (853)
|++||..++...+....+|++++.++++..+++++|...++|.|||||||+|.|+|..+|..+.- +. ..+
T Consensus 329 PeGL~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~ 408 (1019)
T KOG0203|consen 329 PEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFD 408 (1019)
T ss_pred cCCccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhccccc
Confidence 99999999999999999999999999999999999999999999999999999999999864321 00 001
Q ss_pred c-CCCCHHHHHHHHHhccceeeCC---------cccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCC
Q 003049 517 M-TKVPVRTQEILASCHALVFVDN---------KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHL 586 (853)
Q Consensus 517 ~-~~~~~~~~~~la~chsl~~~~~---------~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~ 586 (853)
. +..-.....+...|+......| ...||+.|.|+++++...+.+-... ....+.+...||+|.+
T Consensus 409 ~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~------R~~~~kv~eipfNSt~ 482 (1019)
T KOG0203|consen 409 KSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMEL------RERNPKVAEIPFNSTN 482 (1019)
T ss_pred ccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHH------HHhhHHhhcCCccccc
Confidence 1 1112334566777888776654 3789999999999876544332111 1334556678999999
Q ss_pred CceEEEEEeCC----EEEEEEcCcHHHHHHhhccC-------C------hhHHHHHHHHHhccceEEEEEeeeCCCCChh
Q 003049 587 KRMSVVVRVQE----EFFAFVKGAPETIQDRLTDL-------P------SSYIETYKKYTHQGSRVLALAFKSLPDMTVS 649 (853)
Q Consensus 587 krmsvi~~~~~----~~~~~~KGapE~i~~~~~~i-------p------~~~~~~~~~~~~~G~rvlala~k~l~~~~~~ 649 (853)
|..-.+...++ ++.+.+|||||.++++|+++ | +.+.+.+.++...|-||++++++.++...+.
T Consensus 483 Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p 562 (1019)
T KOG0203|consen 483 KYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFP 562 (1019)
T ss_pred ceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCC
Confidence 99988887754 68889999999999999764 3 5678888999999999999999999854322
Q ss_pred hh---hhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCC
Q 003049 650 DA---RSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKN 726 (853)
Q Consensus 650 ~~---~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~ 726 (853)
+- ..-.-...-.+|.|+|++.+-||+|..+++++..||.|||+|+|+|||+|.||.++|+++||+..+..+.+..
T Consensus 563 ~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~-- 640 (1019)
T KOG0203|consen 563 RGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDI-- 640 (1019)
T ss_pred CceEeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhh--
Confidence 11 1111123346899999999999999999999999999999999999999999999999999986432221110
Q ss_pred CceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccc--eEEEeeChhhHHHHHHHHHHcCCE
Q 003049 727 GKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYV--KVFARVAPEQKELILTTFKAVGRM 804 (853)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~--~VfAr~sP~qK~~iV~~Lq~~g~~ 804 (853)
.+....+.+ ..........+++|.++..++. +++.+++.+- .||||.||+||..||+..|++|.+
T Consensus 641 ---------a~r~~~~v~---~vn~~~a~a~VihG~eL~~~~~-~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~Gai 707 (1019)
T KOG0203|consen 641 ---------AKRLNIPVE---QVNSRDAKAAVIHGSELPDMSS-EQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAI 707 (1019)
T ss_pred ---------HHhcCCccc---ccCccccceEEEecccccccCH-HHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcE
Confidence 000000110 0111124678999999998876 5677777633 699999999999999999999999
Q ss_pred EEEEcCCcccHHHHHhCCceEEec-cCCCcCcccccccccccccCCccC
Q 003049 805 TLMCGDGTNDVGALKQAHVGVALL-NAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 805 v~m~GDG~ND~~ALk~AdVGIAl~-~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
|+.+|||+||+||||.|||||||| .|+|+ +++++|.++.||||.||
T Consensus 708 VaVTGDGVNDsPALKKADIGVAMGiaGSDv--sKqAADmILLDDNFASI 754 (1019)
T KOG0203|consen 708 VAVTGDGVNDSPALKKADIGVAMGIAGSDV--SKQAADMILLDDNFASI 754 (1019)
T ss_pred EEEeCCCcCCChhhcccccceeeccccchH--HHhhcceEEecCcchhh
Confidence 999999999999999999999998 88886 99999999999999987
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-77 Score=735.86 Aligned_cols=647 Identities=20% Similarity=0.245 Sum_probs=437.6
Q ss_pred HhcCCcccccCCccHHH----HHHHHhhchhHHHHHhhhhhhcch----hhHHHHHHHHHHHH----HHHHHHHHHHHHH
Q 003049 176 EKWGRNVFEYPQPTFQK----LMKENCMEPFFVFQVFCVGLWCLD----EYWYYSLFTLFMLF----MFESTMAKSRLKT 243 (853)
Q Consensus 176 ~~yG~N~~~~~~~~~~~----l~~~~~~~pf~vf~i~~~~lw~~~----~y~~~s~~~l~~lv----~~~~~~~~~~~k~ 243 (853)
.+|..|.+...+-+++. .+.+|+..+.+++-++..++-+.. ......++.+++++ +.+....++|.|+
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~vl~v~~ike~~Ed~~r~k~ 164 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFVLLVTAVKDAYEDWRRHRS 164 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35999999887766544 455666555444333322222211 11222222222222 2333344444444
Q ss_pred HHHHHhhhcCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeec-----ceeEEeeccCCCCccc
Q 003049 244 LTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILG-----GSAIVNEAILTGESTP 318 (853)
Q Consensus 244 ~~~l~~m~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~-----G~~~VdES~LTGES~P 318 (853)
-++. .+..++|+|+|+++++++++|+|||+|.|++|| .+|||++|++ |.|.||||.|||||.|
T Consensus 165 d~~~-----N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge-------~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~ 232 (1178)
T PLN03190 165 DRIE-----NNRLAWVLVDDQFQEKKWKDIRVGEIIKIQAND-------TLPCDMVLLSTSDPTGVAYVQTINLDGESNL 232 (1178)
T ss_pred HHhh-----cCcEEEEEECCeEEEEeHHHCCCCCEEEECCCC-------EeeeeEEEEeccCCCceEEEEccccCCeeee
Confidence 3332 346899999999999999999999999999988 9999999998 8899999999999999
Q ss_pred cccccccCCC----CCc----cccccC---------------------CCCeEEEeceEEeecCCCCCCCCCCCCCcEEE
Q 003049 319 QWKVSIMGRE----TGE----KLSARR---------------------DKSHVLFGGTKILQHTPDKTFPLKTPDGGCLA 369 (853)
Q Consensus 319 v~K~~~~~~~----~~~----~~~~~~---------------------~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~ 369 (853)
+.|.+.+... +.. .+..+. ..+|++..|+.+.. ..++.|
T Consensus 233 k~k~~~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~Lrn------------T~~i~G 300 (1178)
T PLN03190 233 KTRYAKQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKN------------TAWAIG 300 (1178)
T ss_pred eEecccchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecC------------CceEEE
Confidence 9998753210 000 000001 11233334443331 458999
Q ss_pred EEEeeCcccchhHHHHHhccccccCCcchhhHHHHHHHHHHH----HHHHHhh--hhhh-cccCC---------------
Q 003049 370 VVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVF----AVIAAGY--VLKK-GMEDP--------------- 427 (853)
Q Consensus 370 ~V~~tG~~T~~g~l~r~i~~~~~~~~~~~~~~~~fi~~ll~~----ai~~~~~--~~~~-~~~~~--------------- 427 (853)
+|+.||.+|. ++..-..+..+.+..++....++.+++++ +++++++ +|.. +....
T Consensus 301 vVVYTG~dTK---~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 377 (1178)
T PLN03190 301 VAVYCGRETK---AMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGG 377 (1178)
T ss_pred EEEEechhhh---HhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccc
Confidence 9999999994 44433333345566665555554433322 2222211 2221 10000
Q ss_pred --Cc-------hhhHHHHHhheeeEeecCCCchHHHHHHHHHHHHHHHhcc----------eeccCCCCcccCccccEEE
Q 003049 428 --TR-------SKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRG----------IFCTEPFRIPFAGKVDMCC 488 (853)
Q Consensus 428 --~~-------~~~~~~l~~~~ii~~~vP~~Lp~~lslav~~s~~~l~k~~----------I~~~~~~~i~~lG~vd~ic 488 (853)
.. .....++.++.++..+||.+|++.+.++-......+.+.. ..|++....|.||+|+++|
T Consensus 378 ~~~~~~~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIf 457 (1178)
T PLN03190 378 PKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVF 457 (1178)
T ss_pred ccccccchhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEE
Confidence 00 0122344556777789999999999988855444444322 5689999999999999999
Q ss_pred eCCCCcccCCCeEEEEEEecC----CCcc------------cc--------cc------------C-CCC-----HHHHH
Q 003049 489 FDKTGTLTSDDMEFRGVVGLS----NAEL------------ED--------DM------------T-KVP-----VRTQE 526 (853)
Q Consensus 489 fDKTGTLT~~~~~v~~i~~~~----~~~~------------~~--------~~------------~-~~~-----~~~~~ 526 (853)
+|||||||+|.|.++.+...+ +... .. .. . +.+ .+.++
T Consensus 458 SDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 537 (1178)
T PLN03190 458 SDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFL 537 (1178)
T ss_pred EcCCCccccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHH
Confidence 999999999999999875321 0000 00 00 0 000 23567
Q ss_pred HHHHhccceee--CC---------cccC-CHHHHHHHhhcC---ceeccCc---ccccCCCCCcceEEEEEecCCCCCCc
Q 003049 527 ILASCHALVFV--DN---------KLVG-DPLEKAALKGID---WSYKSDE---KAMPKRGGGNAVQIVQRHHFASHLKR 588 (853)
Q Consensus 527 ~la~chsl~~~--~~---------~~~g-dple~a~l~~~~---~~~~~~~---~~~~~~~~~~~~~i~~~~~F~s~~kr 588 (853)
+++.||++... ++ +..| +|.|.|+++++. ..+...+ ......+....+++++.+||+|++||
T Consensus 538 ~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKr 617 (1178)
T PLN03190 538 ALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKR 617 (1178)
T ss_pred HHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccE
Confidence 89999998653 21 1334 899999999863 3222211 11122334567999999999999999
Q ss_pred eEEEEEe-CCEEEEEEcCcHHHHHHhhcc-----CChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhh---------
Q 003049 589 MSVVVRV-QEEFFAFVKGAPETIQDRLTD-----LPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARS--------- 653 (853)
Q Consensus 589 msvi~~~-~~~~~~~~KGapE~i~~~~~~-----ip~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~--------- 653 (853)
||||++. ++++++++|||||.|+++|.. .++.+.+.+++|+++|+|||++|||.+++.++.++..
T Consensus 618 MSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~ 697 (1178)
T PLN03190 618 MSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTAL 697 (1178)
T ss_pred EEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhh
Confidence 9999987 456899999999999999953 3456788899999999999999999997643332210
Q ss_pred --------hcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCC
Q 003049 654 --------LHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVK 725 (853)
Q Consensus 654 --------~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~ 725 (853)
.-++++|+||+|+|+++++||+|++++++|++|+++|++++|+|||++.||.+||++|||++++...+..+.
T Consensus 698 ~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~ 777 (1178)
T PLN03190 698 IGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINS 777 (1178)
T ss_pred hhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecC
Confidence 112568999999999999999999999999999999999999999999999999999999976532221111
Q ss_pred CCceeEeecCCccc----ccc-c----ch--hhhccccCceeEEEehhhhHHhhcc---hhHHhhcccce--EEEeeChh
Q 003049 726 NGKVYEWVSPDETE----KIQ-Y----SE--KEVEGLTDAHDLCIGGDCFEMLQQT---SAVLRVIPYVK--VFARVAPE 789 (853)
Q Consensus 726 ~~~~~~~~~~~~~~----~~~-~----~~--~~~~~~~~~~~l~itG~~l~~l~~~---~~~~~~~~~~~--VfAr~sP~ 789 (853)
+.....|...++.. ... . +. ........+..++++|.+++.+.+. +.+.++..++. ||||++|+
T Consensus 778 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~ 857 (1178)
T PLN03190 778 NSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPL 857 (1178)
T ss_pred CchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHH
Confidence 11000011000000 000 0 00 0001112456799999999998763 45777777665 79999999
Q ss_pred hHHHHHHHHHHc-CCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccccCCc
Q 003049 790 QKELILTTFKAV-GRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTK 850 (853)
Q Consensus 790 qK~~iV~~Lq~~-g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~~~~ 850 (853)
||++||+.+|+. +++|+|||||+||++|||+|||||++ +|+|..+|..++|+++.+.+++
T Consensus 858 QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGI-sG~EG~qA~~aSDfaI~~Fr~L 918 (1178)
T PLN03190 858 QKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMASDFAMGQFRFL 918 (1178)
T ss_pred HHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeee-cCchhHHHHHhhccchhhhHHH
Confidence 999999999997 58999999999999999999999977 6888889999999999987765
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-75 Score=677.16 Aligned_cols=467 Identities=19% Similarity=0.218 Sum_probs=364.6
Q ss_pred HHHHHHHHHHHHHHhhh-cCC-ceEEEEE-CCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeecceeEEeecc
Q 003049 235 TMAKSRLKTLTEIRRVR-VDN-QTIMVHR-CGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAI 311 (853)
Q Consensus 235 ~~~~~~~k~~~~l~~m~-~~~-~~v~V~R-~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G~~~VdES~ 311 (853)
...+++.|+.++++++. ..| ..++|+| ||++++|++++|+|||+|.+++|| .|||||++++|.+.||||+
T Consensus 83 ~e~~ae~ra~~~~~~L~~~~~~~~a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd-------~IPaDG~vieG~~~VDESa 155 (675)
T TIGR01497 83 AEAVAEGRGKAQADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEAGD-------VIPCDGEVIEGVASVDESA 155 (675)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEeeCCEEEEEEHHHCCCCCEEEECCCC-------EEeeeEEEEEccEEEEccc
Confidence 33445554444444432 233 3578885 899999999999999999999988 9999999999999999999
Q ss_pred CCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHHHHHhcccc
Q 003049 312 LTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFST 391 (853)
Q Consensus 312 LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l~r~i~~~~ 391 (853)
|||||.||.|++-. ..+.+|+||.+. +|.+.++|+++|.+|..|++++.+..++
T Consensus 156 LTGES~PV~K~~g~-------------~~~~V~aGT~v~-------------~G~~~i~Vt~~g~~S~lgri~~lve~a~ 209 (675)
T TIGR01497 156 ITGESAPVIKESGG-------------DFASVTGGTRIL-------------SDWLVVECTANPGETFLDRMIALVEGAQ 209 (675)
T ss_pred ccCCCCceeecCCC-------------CcceeecCcEEE-------------eeEEEEEEEEecccCHHHHHHHHHHhcc
Confidence 99999999998611 112499999999 7999999999999999999999988777
Q ss_pred ccCCcchhhHHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCchHHHHHHHHHHHHHHHhccee
Q 003049 392 ERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIF 471 (853)
Q Consensus 392 ~~~~~~~~~~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~ 471 (853)
.++++++.....+..++.++.+++.+.+|...... +.. ..+...+.+++++|||+|+..++.....++.++.|+|++
T Consensus 210 ~~ktplq~~l~~l~~~l~~v~li~~~~~~~~~~~~-~~~--~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvL 286 (675)
T TIGR01497 210 RRKTPNEIALTILLIALTLVFLLVTATLWPFAAYG-GNA--ISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVI 286 (675)
T ss_pred cCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-Chh--HHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeE
Confidence 76777664433333332222221111112111111 111 124445667788899988877776666789999999999
Q ss_pred ccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHhccceeeCCcccCCHHHHHHH
Q 003049 472 CTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAAL 551 (853)
Q Consensus 472 ~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~a~l 551 (853)
++++..+|.+|++|++|||||||||+|+|.+..+++.++. ...+.....+.|. ....||+++|++
T Consensus 287 vK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~--------~~~~ll~~aa~~~-------~~s~hP~a~Aiv 351 (675)
T TIGR01497 287 ATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV--------DEKTLADAAQLAS-------LADDTPEGKSIV 351 (675)
T ss_pred eeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCC--------cHHHHHHHHHHhc-------CCCCCcHHHHHH
Confidence 9999999999999999999999999999999998864321 1122233333332 124689999999
Q ss_pred hhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEeCCEEEEEEcCcHHHHHHhhc----cCChhHHHHHHH
Q 003049 552 KGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLT----DLPSSYIETYKK 627 (853)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~~~~~~~KGapE~i~~~~~----~ip~~~~~~~~~ 627 (853)
+++... +.+.. .......+..||++..++|++... ++ ..+.|||||.+++.|. ..|+++++.+++
T Consensus 352 ~~a~~~-~~~~~-------~~~~~~~~~~pf~~~~~~sg~~~~-~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~ 420 (675)
T TIGR01497 352 ILAKQL-GIRED-------DVQSLHATFVEFTAQTRMSGINLD-NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQ 420 (675)
T ss_pred HHHHHc-CCCcc-------ccccccceEEEEcCCCcEEEEEEe-CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHHHHH
Confidence 876421 11000 011234567899999766665433 33 4688999999998883 357888889999
Q ss_pred HHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHH
Q 003049 628 YTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYV 707 (853)
Q Consensus 628 ~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~V 707 (853)
++++|.|++++|+ |.+++|++.++||+|||++++|++||++|++++|+||||+.||.++
T Consensus 421 ~a~~G~r~l~va~---------------------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~i 479 (675)
T TIGR01497 421 VARQGGTPLVVCE---------------------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAI 479 (675)
T ss_pred HHhCCCeEEEEEE---------------------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Confidence 9999999999997 3589999999999999999999999999999999999999999999
Q ss_pred HHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeC
Q 003049 708 ASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVA 787 (853)
Q Consensus 708 A~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~s 787 (853)
|+++||. .+|||++
T Consensus 480 A~~lGI~------------------------------------------------------------------~v~a~~~ 493 (675)
T TIGR01497 480 AAEAGVD------------------------------------------------------------------DFIAEAT 493 (675)
T ss_pred HHHcCCC------------------------------------------------------------------EEEcCCC
Confidence 9999996 5899999
Q ss_pred hhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccccCCccC
Q 003049 788 PEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 788 P~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
|+||..+|+.+|+.|+.|+|+|||+||+|||++|||||||++|++. ++++++..+.+++|.++
T Consensus 494 PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~--akeaadivLldd~~s~I 556 (675)
T TIGR01497 494 PEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAANMVDLDSDPTKL 556 (675)
T ss_pred HHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHH--HHHhCCEEECCCCHHHH
Confidence 9999999999999999999999999999999999999999998885 88888999999998764
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-72 Score=651.74 Aligned_cols=466 Identities=25% Similarity=0.310 Sum_probs=385.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhcCCceEEEEE-CCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecc
Q 003049 220 YYSLFTLFMLFMFESTMAKSRLKTLTEIRR-VRVDNQTIMVHR-CGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPAD 297 (853)
Q Consensus 220 ~~s~~~l~~lv~~~~~~~~~~~k~~~~l~~-m~~~~~~v~V~R-~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD 297 (853)
..+..+++++.+.+....+.+.|+.+.++. +...|.++++++ ||++++|+.++|.|||+|.|++|| +||+|
T Consensus 175 ~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE-------~IPvD 247 (713)
T COG2217 175 EEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGE-------RIPVD 247 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCC-------EecCC
Confidence 334455555556666677777788888877 467888998877 566999999999999999999998 99999
Q ss_pred eeeecceeEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcc
Q 003049 298 MLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFE 377 (853)
Q Consensus 298 ~ill~G~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~ 377 (853)
|++++|+..||||+|||||+|+.|.+ ++.+|+||.+. +|.....|+++|.+
T Consensus 248 G~V~~G~s~vDeS~iTGEs~PV~k~~----------------Gd~V~aGtiN~-------------~G~l~i~vt~~~~d 298 (713)
T COG2217 248 GVVVSGSSSVDESMLTGESLPVEKKP----------------GDEVFAGTVNL-------------DGSLTIRVTRVGAD 298 (713)
T ss_pred eEEEeCcEEeecchhhCCCCCEecCC----------------CCEEeeeEEEC-------------CccEEEEEEecCcc
Confidence 99999999999999999999999986 77899999998 89999999999999
Q ss_pred cchhHHHHHhccccccCCcc----hhhHHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCchHH
Q 003049 378 TSQGKLMRTILFSTERVTAN----SWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPME 453 (853)
Q Consensus 378 T~~g~l~r~i~~~~~~~~~~----~~~~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp~~ 453 (853)
|..+++++.+..++.++.+. ++.+.+|++..++++++.++.|++.+ +.++...+.+++.+++++|||+|.++
T Consensus 299 t~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~----~~~~~~a~~~a~avLVIaCPCALgLA 374 (713)
T COG2217 299 TTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFG----GGDWETALYRALAVLVIACPCALGLA 374 (713)
T ss_pred CHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhc----CCcHHHHHHHHHhheeeeCccHHHhH
Confidence 99999999998887766654 45566788877777777666443333 13456678899999999999999999
Q ss_pred HHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHhcc
Q 003049 454 LSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHA 533 (853)
Q Consensus 454 lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chs 533 (853)
.++++..++.+.+|+||++|++..+|.++++|+++||||||||+|+|.|..+...++ +.+..+.+++ +
T Consensus 375 tP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~----------~e~~~L~laA--a 442 (713)
T COG2217 375 TPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG----------DEDELLALAA--A 442 (713)
T ss_pred HHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC----------CHHHHHHHHH--H
Confidence 999999999999999999999999999999999999999999999999999986542 1222223333 3
Q ss_pred ceeeCCcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEeCCEEEEEEcCcHHHHHHh
Q 003049 534 LVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDR 613 (853)
Q Consensus 534 l~~~~~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~~~~~~~KGapE~i~~~ 613 (853)
+. ..+.||+.+|+.+++...- . ...+..+.+ ...++....+|+ .+..|+++.+.+.
T Consensus 443 lE----~~S~HPiA~AIv~~a~~~~-~-----------~~~~~~~~i------~G~Gv~~~v~g~--~v~vG~~~~~~~~ 498 (713)
T COG2217 443 LE----QHSEHPLAKAIVKAAAERG-L-----------PDVEDFEEI------PGRGVEAEVDGE--RVLVGNARLLGEE 498 (713)
T ss_pred HH----hcCCChHHHHHHHHHHhcC-C-----------CCccceeee------ccCcEEEEECCE--EEEEcCHHHHhhc
Confidence 32 4678999999999654220 0 011111222 244555555663 3345999999877
Q ss_pred hccCChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcE
Q 003049 614 LTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDL 693 (853)
Q Consensus 614 ~~~ip~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v 693 (853)
-...+. ..+..+.+.++|..++.++. |.+++|++.++|++|||++++|++||+.|+++
T Consensus 499 ~~~~~~-~~~~~~~~~~~G~t~v~va~---------------------dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~ 556 (713)
T COG2217 499 GIDLPL-LSERIEALESEGKTVVFVAV---------------------DGKLVGVIALADELRPDAKEAIAALKALGIKV 556 (713)
T ss_pred CCCccc-hhhhHHHHHhcCCeEEEEEE---------------------CCEEEEEEEEeCCCChhHHHHHHHHHHCCCeE
Confidence 666655 77778899999999888876 55899999999999999999999999999999
Q ss_pred EEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhH
Q 003049 694 AMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAV 773 (853)
Q Consensus 694 ~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~ 773 (853)
+|+||||..||.+||+++||.
T Consensus 557 ~mLTGDn~~~A~~iA~~lGId----------------------------------------------------------- 577 (713)
T COG2217 557 VMLTGDNRRTAEAIAKELGID----------------------------------------------------------- 577 (713)
T ss_pred EEEcCCCHHHHHHHHHHcChH-----------------------------------------------------------
Confidence 999999999999999999996
Q ss_pred HhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccccCCcc
Q 003049 774 LRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKS 851 (853)
Q Consensus 774 ~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~~~~~ 851 (853)
.|+|.+.|+||.++|+.||+.|++|+|+|||+||+|||++||||||||+|+|. +.+.+|..+.+++..+
T Consensus 578 -------~v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDv--A~eaADvvL~~~dL~~ 646 (713)
T COG2217 578 -------EVRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDV--AIEAADVVLMRDDLSA 646 (713)
T ss_pred -------hheccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHH--HHHhCCEEEecCCHHH
Confidence 58999999999999999999999999999999999999999999999999996 7778888888877654
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-73 Score=618.47 Aligned_cols=586 Identities=24% Similarity=0.302 Sum_probs=434.2
Q ss_pred cCCCCcccccccc-ccCCCCcHHHHHHHHHhcCCcccccCCccHHHHHHHHhhchh-HHHHHhhhhhhcch------hhH
Q 003049 148 LPYPTKETFGYYL-KCTGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCMEPF-FVFQVFCVGLWCLD------EYW 219 (853)
Q Consensus 148 ~~~~~~~~~~~~~-~~~GLs~~~~~~~~~~~yG~N~~~~~~~~~~~l~~~~~~~pf-~vf~i~~~~lw~~~------~y~ 219 (853)
...|.++.++++. +..||++. |+++|+++||+|+++.++.+-+..|...+.+|. ++++..++....+. .-|
T Consensus 19 ~~~p~eeVfeeL~~t~~GLt~~-E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswVMEaAAimA~~Lang~~~~~DW 97 (942)
T KOG0205|consen 19 EAIPIEEVFEELLCTREGLTSD-EVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIGLANGGGRPPDW 97 (942)
T ss_pred ccCchhhhHHHHhcCCCCCchH-HHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHHHHHHHHHHHHHhcCCCCCcch
Confidence 3456777888887 45699997 999999999999999877766666667778887 45555444333332 134
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHHHHHHhhhcCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeec
Q 003049 220 YYSLFTLFMLFMFESTMAKSRL---KTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPA 296 (853)
Q Consensus 220 ~~s~~~l~~lv~~~~~~~~~~~---k~~~~l~~m~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPa 296 (853)
.....+..++++.....+.++. ....+|++ ....+..|+|||+|.++++++||||||++++.|+ +|||
T Consensus 98 ~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a--~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~Gd-------IiPa 168 (942)
T KOG0205|consen 98 QDFVGICCLLLINSTISFIEENNAGNAAAALMA--GLAPKAKVLRDGKWSEQEASILVPGDILSIKLGD-------IIPA 168 (942)
T ss_pred hhhhhhheeeeecceeeeeeccccchHHHHHHh--ccCcccEEeecCeeeeeeccccccCceeeeccCC-------EecC
Confidence 4433333333333333333333 33445543 1123688999999999999999999999999987 9999
Q ss_pred ceeeecce-eEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeC
Q 003049 297 DMLILGGS-AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTG 375 (853)
Q Consensus 297 D~ill~G~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG 375 (853)
|++|++|+ ..||+|.|||||.|+.|.+ ++.+|+|++|.| |.+.++|++||
T Consensus 169 DaRLl~gD~LkiDQSAlTGESLpvtKh~----------------gd~vfSgSTcKq-------------GE~eaVViATg 219 (942)
T KOG0205|consen 169 DARLLEGDPLKIDQSALTGESLPVTKHP----------------GDEVFSGSTCKQ-------------GEIEAVVIATG 219 (942)
T ss_pred ccceecCCccccchhhhcCCccccccCC----------------CCceeccccccc-------------ceEEEEEEEec
Confidence 99999997 7799999999999999976 678999999984 89999999999
Q ss_pred cccchhHHHHHhccccccCCcchhhH---HHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeE-eecCCCch
Q 003049 376 FETSQGKLMRTILFSTERVTANSWES---GLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIIT-SVIPPELP 451 (853)
Q Consensus 376 ~~T~~g~l~r~i~~~~~~~~~~~~~~---~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~-~~vP~~Lp 451 (853)
..|..|+-...+-. ...+.-+++.. ..|.+.++.+.+++ .|..... . .+-.+.....-++++. .-+|.++|
T Consensus 220 ~~TF~GkAA~LVds-t~~~GHFqkVLt~IGn~ci~si~~g~li-e~~vmy~--~-q~R~~r~~i~nLlvllIGgiPiamP 294 (942)
T KOG0205|consen 220 VHTFFGKAAHLVDS-TNQVGHFQKVLTGIGNFCICSIALGMLI-EITVMYP--I-QHRLYRDGIDNLLVLLIGGIPIAMP 294 (942)
T ss_pred cceeehhhHHhhcC-CCCcccHHHHHHhhhhHHHHHHHHHHHH-HHHhhhh--h-hhhhhhhhhhheheeeecccccccc
Confidence 99999998876643 33332222221 12222222222211 1111111 1 1122333334444444 44999999
Q ss_pred HHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEE--EEecCCCccccccCCCCHHHHHHHH
Q 003049 452 MELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRG--VVGLSNAELEDDMTKVPVRTQEILA 529 (853)
Q Consensus 452 ~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~--i~~~~~~~~~~~~~~~~~~~~~~la 529 (853)
..++..++.+..+|+++|.+.+...+||.++.+|++|+|||||||.|++.|.+ +... .+..+.+...++|
T Consensus 295 tVlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~--------v~gv~~D~~~L~A 366 (942)
T KOG0205|consen 295 TVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVF--------VKGVDKDDVLLTA 366 (942)
T ss_pred eeeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceee--------ecCCChHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999976 3111 1223344444444
Q ss_pred HhccceeeCCcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEe-CCEEEEEEcCcHH
Q 003049 530 SCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRV-QEEFFAFVKGAPE 608 (853)
Q Consensus 530 ~chsl~~~~~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~-~~~~~~~~KGapE 608 (853)
|.+. ..+| .|.+|+|++..++.. +.....++.++-+||++..||.+..+.. +|+.+..+|||||
T Consensus 367 -~rAs-r~en---~DAID~A~v~~L~dP----------Keara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPe 431 (942)
T KOG0205|consen 367 -ARAS-RKEN---QDAIDAAIVGMLADP----------KEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPE 431 (942)
T ss_pred -HHHh-hhcC---hhhHHHHHHHhhcCH----------HHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChH
Confidence 4333 2222 589999999987632 1123568899999999999998887776 6678889999999
Q ss_pred HHHHhh---ccCChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHH
Q 003049 609 TIQDRL---TDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSE 685 (853)
Q Consensus 609 ~i~~~~---~~ip~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~ 685 (853)
.|++.| ..+|+...+.+++|+++|+|-+++|++..++... +.-.....|+|++-+-||+|.|+.++|++
T Consensus 432 qil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~--------~~~g~pw~~~gllp~fdpprhdsa~tirr 503 (942)
T KOG0205|consen 432 QILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTK--------ESPGGPWEFVGLLPLFDPPRHDSAETIRR 503 (942)
T ss_pred HHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccc--------cCCCCCcccccccccCCCCccchHHHHHH
Confidence 999999 4689999999999999999999999998774321 12234578999999999999999999999
Q ss_pred HhhCCCcEEEEcCCChhhHHHHHHHcCcCCC--C-eEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehh
Q 003049 686 LKNSSQDLAMITGDQALTACYVASQVHIVTK--P-VLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGD 762 (853)
Q Consensus 686 L~~agi~v~miTGDn~~TA~~VA~~~gI~~~--~-~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~ 762 (853)
....|.+|.|+|||....|...+|++|+-.+ + ...+....++ .+.|
T Consensus 504 al~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~------------------------------~~~~- 552 (942)
T KOG0205|consen 504 ALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDG------------------------------SMPG- 552 (942)
T ss_pred HHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCC------------------------------CCCC-
Confidence 9999999999999999999999999999643 0 1011110000 0011
Q ss_pred hhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccc
Q 003049 763 CFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSE 842 (853)
Q Consensus 763 ~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~ 842 (853)
....+++.+..=||.+.|+||..+|+.||++||.++|+|||+||+||||.||+|||+.++++. +..++|+
T Consensus 553 --------~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atda--ar~asdi 622 (942)
T KOG0205|consen 553 --------SPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDA--ARSASDI 622 (942)
T ss_pred --------CcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhh--hcccccE
Confidence 123445556678999999999999999999999999999999999999999999999999995 7778887
Q ss_pred cccccCC
Q 003049 843 ASKDENT 849 (853)
Q Consensus 843 ~~~~~~~ 849 (853)
++.+...
T Consensus 623 Vltepgl 629 (942)
T KOG0205|consen 623 VLTEPGL 629 (942)
T ss_pred EEcCCCc
Confidence 7766443
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-68 Score=619.26 Aligned_cols=423 Identities=36% Similarity=0.565 Sum_probs=356.8
Q ss_pred HHHHHHHHhhhcCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeecceeEEeeccCCCCccccc
Q 003049 241 LKTLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQW 320 (853)
Q Consensus 241 ~k~~~~l~~m~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G~~~VdES~LTGES~Pv~ 320 (853)
.+.++.++++...|..++|+|+| |++|++++|+|||+|.+++|+ .|||||+|++|.+.||||+|||||.|+.
T Consensus 21 ~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~-------~iP~Dg~vl~g~~~vdes~LTGEs~pv~ 92 (499)
T TIGR01494 21 EDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGE-------IVPADGVLLSGSCFVDESNLTGESVPVL 92 (499)
T ss_pred HHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCC-------EeeeeEEEEEccEEEEcccccCCCCCee
Confidence 34444554433677899999999 999999999999999999988 9999999999999999999999999999
Q ss_pred cccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHHHHHhccccccCCcc---
Q 003049 321 KVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTAN--- 397 (853)
Q Consensus 321 K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l~r~i~~~~~~~~~~--- 397 (853)
|.+ ++.+|+||.+. +|.....|+++|.+|..+++.+.+....+..++.
T Consensus 93 k~~----------------g~~v~~gs~~~-------------~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~ 143 (499)
T TIGR01494 93 KTA----------------GDAVFAGTYVF-------------NGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPK 143 (499)
T ss_pred ecc----------------CCccccCcEEe-------------ccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHH
Confidence 986 55689999998 6889999999999999999998876555433332
Q ss_pred -hhhH-HHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCchHHHHHHHHHHHHHHHhcceeccCC
Q 003049 398 -SWES-GLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEP 475 (853)
Q Consensus 398 -~~~~-~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~ 475 (853)
++.. .+|+.++++++++++++++..+.. ..++...+..++.++++++||+||++++++...+..++.|+||+++++
T Consensus 144 ~~~~~~~~~~~~~~~la~~~~~~~~~~~~~--~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~ 221 (499)
T TIGR01494 144 LDRLSDIIFILFVLLIALAVFLFWAIGLWD--PNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSL 221 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcc--cccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEech
Confidence 2333 456666666666655554433211 113567789999999999999999999999999999999999999999
Q ss_pred CCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHhccceeeCCcccCCHHHHHHHhhcC
Q 003049 476 FRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGID 555 (853)
Q Consensus 476 ~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~a~l~~~~ 555 (853)
..+|.+|++|++|||||||||+|+|+|.+++..+. ...++||+|+|+++++.
T Consensus 222 ~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~----------------------------~~~s~hp~~~ai~~~~~ 273 (499)
T TIGR01494 222 NALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG----------------------------EYLSGHPDERALVKSAK 273 (499)
T ss_pred hhhhhccCCcEEEeeCCCccccCceEEEEEEecCC----------------------------CcCCCChHHHHHHHHhh
Confidence 99999999999999999999999999999875321 13468999999999876
Q ss_pred ceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEeCCEEEEEEcCcHHHHHHhhccCChhHHHHHHHHHhccceE
Q 003049 556 WSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRV 635 (853)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~~~~~~~KGapE~i~~~~~~ip~~~~~~~~~~~~~G~rv 635 (853)
+. .++.+||++..++|+++++.+++ .++||+||.+.+.|.. +.+..+.++++|+|+
T Consensus 274 ~~------------------~~~~~~f~~~~~~~~~~~~~~~~--~~~~G~~~~i~~~~~~----~~~~~~~~~~~g~~~ 329 (499)
T TIGR01494 274 WK------------------ILNVFEFSSVRKRMSVIVRGPDG--TYVKGAPEFVLSRVKD----LEEKVKELAQSGLRV 329 (499)
T ss_pred hc------------------CcceeccCCCCceEEEEEecCCc--EEEeCCHHHHHHhhHH----HHHHHHHHHhCCCEE
Confidence 42 12457999999999999986443 3689999999998853 445556788999999
Q ss_pred EEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC
Q 003049 636 LALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (853)
Q Consensus 636 lala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~ 715 (853)
+++|++. +++|++.++|++|++++++|+.|+++|++++|+|||++.||.++|+++||
T Consensus 330 ~~~a~~~---------------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-- 386 (499)
T TIGR01494 330 LAVASKE---------------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-- 386 (499)
T ss_pred EEEEECC---------------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc--
Confidence 9999843 69999999999999999999999999999999999999999999999975
Q ss_pred CCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHH
Q 003049 716 KPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELIL 795 (853)
Q Consensus 716 ~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV 795 (853)
+||++|+||.++|
T Consensus 387 -------------------------------------------------------------------~~~~~p~~K~~~v 399 (499)
T TIGR01494 387 -------------------------------------------------------------------FARVTPEEKAALV 399 (499)
T ss_pred -------------------------------------------------------------------eeccCHHHHHHHH
Confidence 5789999999999
Q ss_pred HHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccccCCcc
Q 003049 796 TTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKS 851 (853)
Q Consensus 796 ~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~~~~~ 851 (853)
+.+|+.|+.|+|+|||+||+|||++|||||||+ +...+|..+.++++.+
T Consensus 400 ~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-------a~~~adivl~~~~l~~ 448 (499)
T TIGR01494 400 EALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-------AKAAADIVLLDDNLST 448 (499)
T ss_pred HHHHHCCCEEEEECCChhhHHHHHhCCCccccc-------hHHhCCeEEecCCHHH
Confidence 999999999999999999999999999999996 3555777777766543
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-66 Score=626.44 Aligned_cols=459 Identities=21% Similarity=0.245 Sum_probs=369.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceee
Q 003049 222 SLFTLFMLFMFESTMAKSRLKTLTEIRRV-RVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLI 300 (853)
Q Consensus 222 s~~~l~~lv~~~~~~~~~~~k~~~~l~~m-~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~il 300 (853)
+.++++++.+.+....+++.|+.+.++++ ...|.+++|+|||++++|++++|+|||+|.|++|+ +|||||+|
T Consensus 209 a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~-------~IP~Dg~v 281 (741)
T PRK11033 209 AAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGG-------RLPADGKL 281 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCC-------EEecceEE
Confidence 34444444455556666677776666663 45678999999999999999999999999999988 99999999
Q ss_pred ecceeEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccch
Q 003049 301 LGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQ 380 (853)
Q Consensus 301 l~G~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~ 380 (853)
++|++.||||+|||||.|+.|.+ ++.+|+||.++ +|.+.+.|+++|.+|..
T Consensus 282 i~g~~~vdes~lTGEs~Pv~k~~----------------Gd~V~aGt~~~-------------~G~~~i~V~~~g~~s~l 332 (741)
T PRK11033 282 LSPFASFDESALTGESIPVERAT----------------GEKVPAGATSV-------------DRLVTLEVLSEPGASAI 332 (741)
T ss_pred EECcEEeecccccCCCCCEecCC----------------CCeeccCCEEc-------------CceEEEEEEeccccCHH
Confidence 99999999999999999999975 67899999998 79999999999999999
Q ss_pred hHHHHHhccccccCCcch----hhHHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCchHHHHH
Q 003049 381 GKLMRTILFSTERVTANS----WESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSI 456 (853)
Q Consensus 381 g~l~r~i~~~~~~~~~~~----~~~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp~~lsl 456 (853)
|++++.+....+++++.+ +.+.+|+.++++++++.+++++... +.++...+..++.++++.|||+|.++.++
T Consensus 333 ~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~----~~~~~~~i~~a~svlviacPcaL~latP~ 408 (741)
T PRK11033 333 DRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLF----AAPWQEWIYRGLTLLLIGCPCALVISTPA 408 (741)
T ss_pred HHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----cCCHHHHHHHHHHHHHHhchhhhhhhhHH
Confidence 999999988776666544 4455666666666666655443221 22345567788888899999999999999
Q ss_pred HHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHhcccee
Q 003049 457 AVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVF 536 (853)
Q Consensus 457 av~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~ 536 (853)
++..++.+++|+||+++++..+|.++++|++|||||||||+|+|+|..+...++ ...+..+.+++ ++.
T Consensus 409 a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~---------~~~~~~l~~aa--~~e- 476 (741)
T PRK11033 409 AITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATG---------ISESELLALAA--AVE- 476 (741)
T ss_pred HHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCC---------CCHHHHHHHHH--HHh-
Confidence 999999999999999999999999999999999999999999999999876432 12222222222 221
Q ss_pred eCCcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceE---EEEEeCCEEEEEEcCcHHHHHHh
Q 003049 537 VDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMS---VVVRVQEEFFAFVKGAPETIQDR 613 (853)
Q Consensus 537 ~~~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krms---vi~~~~~~~~~~~KGapE~i~~~ 613 (853)
..+.||+++|+++++... + + .+||.++.+.+. +....+++.+ ..|+|+.+.+
T Consensus 477 ---~~s~hPia~Ai~~~a~~~---~------------~----~~~~~~~~~~~~g~Gv~~~~~g~~~--~ig~~~~~~~- 531 (741)
T PRK11033 477 ---QGSTHPLAQAIVREAQVR---G------------L----AIPEAESQRALAGSGIEGQVNGERV--LICAPGKLPP- 531 (741)
T ss_pred ---cCCCCHHHHHHHHHHHhc---C------------C----CCCCCcceEEEeeEEEEEEECCEEE--EEecchhhhh-
Confidence 346899999999876321 0 0 135555555542 3334455543 3489998865
Q ss_pred hccCChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcE
Q 003049 614 LTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDL 693 (853)
Q Consensus 614 ~~~ip~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v 693 (853)
+++.+.+.++.+..+|+|++++|+ |.+|+|++.|+|++|||++++|++|++.|+++
T Consensus 532 ---~~~~~~~~~~~~~~~g~~~v~va~---------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~ 587 (741)
T PRK11033 532 ---LADAFAGQINELESAGKTVVLVLR---------------------NDDVLGLIALQDTLRADARQAISELKALGIKG 587 (741)
T ss_pred ---ccHHHHHHHHHHHhCCCEEEEEEE---------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEE
Confidence 345666777889999999999997 56899999999999999999999999999999
Q ss_pred EEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhH
Q 003049 694 AMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAV 773 (853)
Q Consensus 694 ~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~ 773 (853)
+|+|||+..+|.++|+++||.
T Consensus 588 ~llTGd~~~~a~~ia~~lgi~----------------------------------------------------------- 608 (741)
T PRK11033 588 VMLTGDNPRAAAAIAGELGID----------------------------------------------------------- 608 (741)
T ss_pred EEEcCCCHHHHHHHHHHcCCC-----------------------------------------------------------
Confidence 999999999999999999994
Q ss_pred HhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccccCCcc
Q 003049 774 LRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKS 851 (853)
Q Consensus 774 ~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~~~~~ 851 (853)
+++++.|+||..+|+.||+. +.|+|+|||+||+|||++|||||||++|++. +.+.+|..+.++++..
T Consensus 609 --------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~--a~~~adivl~~~~l~~ 675 (741)
T PRK11033 609 --------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDV--ALETADAALTHNRLRG 675 (741)
T ss_pred --------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHH--HHHhCCEEEecCCHHH
Confidence 46778999999999999965 5899999999999999999999999999886 4455677777766643
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-66 Score=591.04 Aligned_cols=462 Identities=22% Similarity=0.261 Sum_probs=378.5
Q ss_pred HHHHHHHHHHHh-hhcCCceEEEEECCE-EEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeecceeEEeeccCCCC
Q 003049 238 KSRLKTLTEIRR-VRVDNQTIMVHRCGK-WVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGE 315 (853)
Q Consensus 238 ~~~~k~~~~l~~-m~~~~~~v~V~R~g~-~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G~~~VdES~LTGE 315 (853)
..+.|+-..+.+ |+..|.++.++.+|+ .++|+.+.|.+||+|.|.+|+ +||+||++++|++.||||++|||
T Consensus 360 ~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~-------kiPvDG~Vv~Gss~VDEs~iTGE 432 (951)
T KOG0207|consen 360 LAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGE-------KIPVDGVVVDGSSEVDESLITGE 432 (951)
T ss_pred HhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCC-------ccccccEEEeCceeechhhccCC
Confidence 344555555555 577888999999997 899999999999999999998 99999999999999999999999
Q ss_pred ccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHHHHHhccccccCC
Q 003049 316 STPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVT 395 (853)
Q Consensus 316 S~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l~r~i~~~~~~~~ 395 (853)
|+||.|++ ++.+.+||.+. +|.....++++|.+|..++++|.+..++..+.
T Consensus 433 s~PV~Kk~----------------gs~ViaGsiN~-------------nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKa 483 (951)
T KOG0207|consen 433 SMPVPKKK----------------GSTVIAGSINL-------------NGTLLVKATKVGGDTTLAQIVKLVEEAQLSKA 483 (951)
T ss_pred ceecccCC----------------CCeeeeeeecC-------------CceEEEEEEeccccchHHHHHHHHHHHHcccc
Confidence 99999986 78999999998 79999999999999999999999988776665
Q ss_pred cc----hhhHHHHHHHHHHHHHHHHhhhhhhcccCCC------chhhHHHHHhheeeEeecCCCchHHHHHHHHHHHHHH
Q 003049 396 AN----SWESGLFILFLVVFAVIAAGYVLKKGMEDPT------RSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIAL 465 (853)
Q Consensus 396 ~~----~~~~~~fi~~ll~~ai~~~~~~~~~~~~~~~------~~~~~~~l~~~~ii~~~vP~~Lp~~lslav~~s~~~l 465 (853)
+. ++.+.+|..++++++++.+.+|.+.+..... ......|..++.+++++|||+|.++.+.|+..+..-.
T Consensus 484 piQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvg 563 (951)
T KOG0207|consen 484 PIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVG 563 (951)
T ss_pred hHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechh
Confidence 54 4556778888888887776666555542211 2233456778999999999999999999998888888
Q ss_pred HhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHhccceeeCCcccCCH
Q 003049 466 ARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDP 545 (853)
Q Consensus 466 ~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdp 545 (853)
+++|+++|..+.+|.+.+|++++||||||||+|++.|..+....+. .+....+.+++... ..+.||
T Consensus 564 A~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~--------~~~~e~l~~v~a~E------s~SeHP 629 (951)
T KOG0207|consen 564 ATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNP--------ISLKEALALVAAME------SGSEHP 629 (951)
T ss_pred hhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCc--------ccHHHHHHHHHHHh------cCCcCc
Confidence 9999999999999999999999999999999999999999876542 23333333322211 356899
Q ss_pred HHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEeCCEEEEEEcCcHHHHHHhhccCChhHHHHH
Q 003049 546 LEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLTDLPSSYIETY 625 (853)
Q Consensus 546 le~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~~~~~~~KGapE~i~~~~~~ip~~~~~~~ 625 (853)
+.+|+.+++......... ..++..-.|..+-.. +=+..+++. ..-|+-|.+...-...|++.++..
T Consensus 630 ig~AIv~yak~~~~~~~~----------~~~~~~~~~pg~g~~--~~~~~~~~~--i~iGN~~~~~r~~~~~~~~i~~~~ 695 (951)
T KOG0207|consen 630 IGKAIVDYAKEKLVEPNP----------EGVLSFEYFPGEGIY--VTVTVDGNE--VLIGNKEWMSRNGCSIPDDILDAL 695 (951)
T ss_pred hHHHHHHHHHhcccccCc----------cccceeecccCCCcc--cceEEeeeE--EeechHHHHHhcCCCCchhHHHhh
Confidence 999999998644311110 011111112111111 222222322 456999999998888999999999
Q ss_pred HHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHH
Q 003049 626 KKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTAC 705 (853)
Q Consensus 626 ~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~ 705 (853)
++..++|..+..+++ |-+++|++.++|++|||+..+|+.||+.|++++|+||||..||.
T Consensus 696 ~~~e~~g~tvv~v~v---------------------n~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~ 754 (951)
T KOG0207|consen 696 TESERKGQTVVYVAV---------------------NGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAAR 754 (951)
T ss_pred hhHhhcCceEEEEEE---------------------CCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHH
Confidence 999999999999988 66899999999999999999999999999999999999999999
Q ss_pred HHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEEe
Q 003049 706 YVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFAR 785 (853)
Q Consensus 706 ~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr 785 (853)
++|+++||. .|||.
T Consensus 755 svA~~VGi~------------------------------------------------------------------~V~ae 768 (951)
T KOG0207|consen 755 SVAQQVGID------------------------------------------------------------------NVYAE 768 (951)
T ss_pred HHHHhhCcc------------------------------------------------------------------eEEec
Confidence 999999964 69999
Q ss_pred eChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccccCCccC
Q 003049 786 VAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 786 ~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
+.|+||.++|+.||+.|..|+|||||+||+|||.+|||||||+.|++. |..++|.++..++..+|
T Consensus 769 v~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~v--AieaADIVLmrn~L~~v 833 (951)
T KOG0207|consen 769 VLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDV--AIEAADIVLMRNDLRDV 833 (951)
T ss_pred cCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHH--HHhhCCEEEEccchhhh
Confidence 999999999999999999999999999999999999999999999885 77788888888776654
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-64 Score=593.90 Aligned_cols=477 Identities=22% Similarity=0.266 Sum_probs=374.8
Q ss_pred hhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCceEEEEECC-EEEEeecCCcCCCeEEEEcCCCCCCC
Q 003049 212 LWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVR-VDNQTIMVHRCG-KWVKLAGTDLVPGDVVSIGRSSGQTG 289 (853)
Q Consensus 212 lw~~~~y~~~s~~~l~~lv~~~~~~~~~~~k~~~~l~~m~-~~~~~v~V~R~g-~~~~I~s~~LvpGDiV~l~~g~~d~~ 289 (853)
++++...|..+..+++++++......++++|+.+.++++. ..|..++|+|+| ++++|++++|+|||+|.+++|+
T Consensus 11 ~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~---- 86 (556)
T TIGR01525 11 AAYAMGLVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGE---- 86 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCC----
Confidence 3333344556666677777777777888888888888763 456789999996 9999999999999999999988
Q ss_pred CCceeecceeeecceeEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEE
Q 003049 290 EDKSVPADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLA 369 (853)
Q Consensus 290 ~~~~vPaD~ill~G~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~ 369 (853)
.|||||+|++|++.||||+|||||.|+.|.+ ++.+|+||.+. +|.+.+
T Consensus 87 ---~iP~Dg~vi~g~~~vdes~lTGEs~pv~k~~----------------g~~v~aGt~v~-------------~g~~~~ 134 (556)
T TIGR01525 87 ---RIPVDGVVISGESEVDESALTGESMPVEKKE----------------GDEVFAGTING-------------DGSLTI 134 (556)
T ss_pred ---EeccceEEEecceEEeehhccCCCCCEecCC----------------cCEEeeceEEC-------------CceEEE
Confidence 9999999999999999999999999999975 67899999998 799999
Q ss_pred EEEeeCcccchhHHHHHhccccccCCcchh----hHHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEee
Q 003049 370 VVLRTGFETSQGKLMRTILFSTERVTANSW----ESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSV 445 (853)
Q Consensus 370 ~V~~tG~~T~~g~l~r~i~~~~~~~~~~~~----~~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~ 445 (853)
+|++||.+|..|++.+.+..+.+++++.++ .+.+|+.+.++++++++++++..+. . ..+..++.+++..
T Consensus 135 ~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~-----~--~~~~~~~~vlv~~ 207 (556)
T TIGR01525 135 RVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGA-----L--GALYRALAVLVVA 207 (556)
T ss_pred EEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----c--hHHHHHHHHHhhc
Confidence 999999999999999998876665555443 3445666666666666555544321 1 5677888899999
Q ss_pred cCCCchHHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHH
Q 003049 446 IPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQ 525 (853)
Q Consensus 446 vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~ 525 (853)
+||+||+++++++..++.+|+|+||+++++..+|.+|++|++|||||||||+|+|+|.++...++.. ...+
T Consensus 208 ~P~al~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-------~~~~-- 278 (556)
T TIGR01525 208 CPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS-------ISEE-- 278 (556)
T ss_pred cccchhehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC-------ccHH--
Confidence 9999999999999999999999999999999999999999999999999999999999988643310 0012
Q ss_pred HHHHHhccceeeCCcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEeCCEEEEEEcC
Q 003049 526 EILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKG 605 (853)
Q Consensus 526 ~~la~chsl~~~~~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~~~~~~~KG 605 (853)
.++..|.++. ....||+++|+++++... +.+.. . . .++ +.++ ..++....++. .-+..|
T Consensus 279 ~~l~~a~~~e----~~~~hp~~~Ai~~~~~~~-~~~~~---~-~--~~~---~~~~------~~gi~~~~~g~-~~~~lg 337 (556)
T TIGR01525 279 ELLALAAALE----QSSSHPLARAIVRYAKKR-GLELP---K-Q--EDV---EEVP------GKGVEATVDGQ-EEVRIG 337 (556)
T ss_pred HHHHHHHHHh----ccCCChHHHHHHHHHHhc-CCCcc---c-c--cCe---eEec------CCeEEEEECCe-eEEEEe
Confidence 2333343332 246799999999887421 00000 0 0 001 1111 11233333442 234459
Q ss_pred cHHHHHHhhccCChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHH
Q 003049 606 APETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSE 685 (853)
Q Consensus 606 apE~i~~~~~~ip~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~ 685 (853)
+++.+...-...+ .+.+..+.++++|+|++.++. |.+++|.+.++|++||+++++|++
T Consensus 338 ~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~v~~---------------------~~~~~g~i~~~d~~~~g~~e~l~~ 395 (556)
T TIGR01525 338 NPRLLELAAEPIS-ASPDLLNEGESQGKTVVFVAV---------------------DGELLGVIALRDQLRPEAKEAIAA 395 (556)
T ss_pred cHHHHhhcCCCch-hhHHHHHHHhhCCcEEEEEEE---------------------CCEEEEEEEecccchHhHHHHHHH
Confidence 9987721112222 334566778899999999986 558999999999999999999999
Q ss_pred HhhCC-CcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhh
Q 003049 686 LKNSS-QDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCF 764 (853)
Q Consensus 686 L~~ag-i~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l 764 (853)
|++.| +++.|+|||+..+|.++++++||.
T Consensus 396 L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~-------------------------------------------------- 425 (556)
T TIGR01525 396 LKRAGGIKLVMLTGDNRSAAEAVAAELGID-------------------------------------------------- 425 (556)
T ss_pred HHHcCCCeEEEEeCCCHHHHHHHHHHhCCC--------------------------------------------------
Confidence 99999 999999999999999999999995
Q ss_pred HHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccc
Q 003049 765 EMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEAS 844 (853)
Q Consensus 765 ~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~ 844 (853)
.+|+++.|++|..+++.+++.|+.|+|+|||.||++|+++|||||+++++++. ++..+|...
T Consensus 426 ----------------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~--~~~~Ad~vi 487 (556)
T TIGR01525 426 ----------------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDV--AIEAADIVL 487 (556)
T ss_pred ----------------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHH--HHHhCCEEE
Confidence 58999999999999999999999999999999999999999999999976664 556778887
Q ss_pred cccCCcc
Q 003049 845 KDENTKS 851 (853)
Q Consensus 845 ~~~~~~~ 851 (853)
.++++.+
T Consensus 488 ~~~~~~~ 494 (556)
T TIGR01525 488 LNDDLSS 494 (556)
T ss_pred eCCCHHH
Confidence 7777654
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-64 Score=587.97 Aligned_cols=458 Identities=23% Similarity=0.272 Sum_probs=361.4
Q ss_pred hhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCC
Q 003049 209 CVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVR-VDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQ 287 (853)
Q Consensus 209 ~~~lw~~~~y~~~s~~~l~~lv~~~~~~~~~~~k~~~~l~~m~-~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d 287 (853)
+++.|.+.+ |+.+.++++++.+......++++|+.+.++++. ..|.+++|+|||++++|++++|+|||+|.+++|+
T Consensus 9 ~~~~~~~~~-~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDiv~v~~G~-- 85 (536)
T TIGR01512 9 ALGAVAIGE-YLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKPGE-- 85 (536)
T ss_pred HHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCCEEEEcCCC--
Confidence 344444444 455666666666667777788888888887754 4678999999999999999999999999999988
Q ss_pred CCCCceeecceeeecceeEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcE
Q 003049 288 TGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGC 367 (853)
Q Consensus 288 ~~~~~~vPaD~ill~G~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~ 367 (853)
.|||||+|++|++.||||+|||||.|+.|.+ ++.+|+||.+. +|.+
T Consensus 86 -----~iP~Dg~ii~g~~~vdes~lTGEs~pv~k~~----------------g~~v~aGt~v~-------------~G~~ 131 (536)
T TIGR01512 86 -----RVPVDGVVLSGTSTVDESALTGESVPVEKAP----------------GDEVFAGAINL-------------DGVL 131 (536)
T ss_pred -----EeecceEEEeCcEEEEecccCCCCCcEEeCC----------------CCEEEeeeEEC-------------CceE
Confidence 9999999999999999999999999999975 67899999998 7999
Q ss_pred EEEEEeeCcccchhHHHHHhccccccCCcchhh----HHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeE
Q 003049 368 LAVVLRTGFETSQGKLMRTILFSTERVTANSWE----SGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIIT 443 (853)
Q Consensus 368 ~~~V~~tG~~T~~g~l~r~i~~~~~~~~~~~~~----~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~ 443 (853)
.++|++||.+|..|++.+.+..+....++.++. +.+|+.+++.++++.+++++..+ .. ...+..++.+++
T Consensus 132 ~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~svlv 205 (536)
T TIGR01512 132 TIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK----RW--PFWVYRALVLLV 205 (536)
T ss_pred EEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----cc--HHHHHHHHHHHh
Confidence 999999999999999999888766655554443 44555555555555444443322 11 125777888899
Q ss_pred eecCCCchHHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHH
Q 003049 444 SVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVR 523 (853)
Q Consensus 444 ~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~ 523 (853)
.+|||+||+++++++..++.+++|+||+++++.++|.+|++|++|||||||||+|+|++.++.+. +
T Consensus 206 ~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~--------------~ 271 (536)
T TIGR01512 206 VASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA--------------E 271 (536)
T ss_pred hcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH--------------H
Confidence 99999999999999999999999999999999999999999999999999999999999988631 2
Q ss_pred HHHHHHHhccceeeCCcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEeCCEEEEEE
Q 003049 524 TQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFV 603 (853)
Q Consensus 524 ~~~~la~chsl~~~~~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~~~~~~~ 603 (853)
++..+.++. ....||+++|+++++... + .+.-.+.+| ...+....+++.+ .
T Consensus 272 ---~l~~a~~~e----~~~~hp~~~Ai~~~~~~~---~-----------~~~~~~~~~------g~gi~~~~~g~~~--~ 322 (536)
T TIGR01512 272 ---VLRLAAAAE----QASSHPLARAIVDYARKR---E-----------NVESVEEVP------GEGVRAVVDGGEV--R 322 (536)
T ss_pred ---HHHHHHHHh----ccCCCcHHHHHHHHHHhc---C-----------CCcceEEec------CCeEEEEECCeEE--E
Confidence 222222222 345799999999876421 0 001111112 1223333345433 3
Q ss_pred cCcHHHHHHhhccCChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHH
Q 003049 604 KGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKIL 683 (853)
Q Consensus 604 KGapE~i~~~~~~ip~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I 683 (853)
.|+++.+.+... ..+..+|.+++.++. |..++|.+.++|++||+++++|
T Consensus 323 ig~~~~~~~~~~----------~~~~~~~~~~~~v~~---------------------~~~~~g~i~~~d~l~~~~~e~i 371 (536)
T TIGR01512 323 IGNPRSLEAAVG----------ARPESAGKTIVHVAR---------------------DGTYLGYILLSDEPRPDAAEAI 371 (536)
T ss_pred EcCHHHHhhcCC----------cchhhCCCeEEEEEE---------------------CCEEEEEEEEeccchHHHHHHH
Confidence 599877654321 145677888876653 6789999999999999999999
Q ss_pred HHHhhCCC-cEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehh
Q 003049 684 SELKNSSQ-DLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGD 762 (853)
Q Consensus 684 ~~L~~agi-~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~ 762 (853)
++|+++|+ ++.|+|||+..+|..+++++||.
T Consensus 372 ~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~------------------------------------------------ 403 (536)
T TIGR01512 372 AELKALGIEKVVMLTGDRRAVAERVARELGID------------------------------------------------ 403 (536)
T ss_pred HHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh------------------------------------------------
Confidence 99999999 99999999999999999999995
Q ss_pred hhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEec-cCCCcCccccccc
Q 003049 763 CFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALL-NAVPPTQSGNSSS 841 (853)
Q Consensus 763 ~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~-~~~~~~~~~~~~~ 841 (853)
.+|+++.|++|..+++.+++.++.|+|+|||.||++|+++||+||+++ ++++. +...+|
T Consensus 404 ------------------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~--~~~~ad 463 (536)
T TIGR01512 404 ------------------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDV--AIETAD 463 (536)
T ss_pred ------------------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHH--HHHhCC
Confidence 468899999999999999999999999999999999999999999999 66664 555667
Q ss_pred ccccccCCcc
Q 003049 842 EASKDENTKS 851 (853)
Q Consensus 842 ~~~~~~~~~~ 851 (853)
....++++..
T Consensus 464 ~vl~~~~l~~ 473 (536)
T TIGR01512 464 VVLLNDDLSR 473 (536)
T ss_pred EEEECCCHHH
Confidence 7776665543
|
. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-62 Score=576.63 Aligned_cols=454 Identities=21% Similarity=0.266 Sum_probs=353.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcCCceEEEEEC-CEEEEeecCCcCCCeEEEEcCCCCCCCCCceee
Q 003049 218 YWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRV-RVDNQTIMVHRC-GKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVP 295 (853)
Q Consensus 218 y~~~s~~~l~~lv~~~~~~~~~~~k~~~~l~~m-~~~~~~v~V~R~-g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vP 295 (853)
||..+..+++++.+.+....+.+.|+.+.++++ ...|.+++++|+ |++++|++++|+|||+|.|++|+ .||
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge-------~iP 125 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGE-------KIP 125 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCC-------Eec
Confidence 333333334444444555566666666666654 446778999985 77899999999999999999988 999
Q ss_pred cceeeecceeEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeC
Q 003049 296 ADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTG 375 (853)
Q Consensus 296 aD~ill~G~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG 375 (853)
|||+|++|++.||||+|||||.|+.|.+ ++.+|+||.+. +|.+.+.|++||
T Consensus 126 ~Dg~v~~g~~~vdes~lTGEs~pv~k~~----------------gd~V~aGt~~~-------------~g~~~~~v~~~g 176 (562)
T TIGR01511 126 VDGTVIEGESEVDESLVTGESLPVPKKV----------------GDPVIAGTVNG-------------TGSLVVRATATG 176 (562)
T ss_pred CceEEEECceEEehHhhcCCCCcEEcCC----------------CCEEEeeeEEC-------------CceEEEEEEEec
Confidence 9999999999999999999999999976 67899999998 799999999999
Q ss_pred cccchhHHHHHhccccccCCcchh----hHHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCch
Q 003049 376 FETSQGKLMRTILFSTERVTANSW----ESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELP 451 (853)
Q Consensus 376 ~~T~~g~l~r~i~~~~~~~~~~~~----~~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp 451 (853)
.+|..|++++.+..+..++++.++ .+.+|+..+++++++++.+|+ ..+..++.++++.|||+|+
T Consensus 177 ~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~------------~~~~~~~svlvvacPcaL~ 244 (562)
T TIGR01511 177 EDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL------------FALEFAVTVLIIACPCALG 244 (562)
T ss_pred CCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHhccchhh
Confidence 999999999999877666655544 344555555555554433321 2467788889999999999
Q ss_pred HHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHh
Q 003049 452 MELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASC 531 (853)
Q Consensus 452 ~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~c 531 (853)
+++++++..++.+++|+||+++++..+|.++++|++|||||||||+|+|++.++...++. ..+ .++..|
T Consensus 245 la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~---------~~~--~~l~~a 313 (562)
T TIGR01511 245 LATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR---------DRT--ELLALA 313 (562)
T ss_pred hHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC---------CHH--HHHHHH
Confidence 999999999999999999999999999999999999999999999999999998764321 112 223333
Q ss_pred ccceeeCCcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEeCCEEEEEEcCcHHHHH
Q 003049 532 HALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQ 611 (853)
Q Consensus 532 hsl~~~~~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~~~~~~~KGapE~i~ 611 (853)
+++. ..+.||+++|+++++... +... ....-.+.+ ...++....+++. +..|+++.+.
T Consensus 314 a~~e----~~s~HPia~Ai~~~~~~~---~~~~-------~~~~~~~~~------~g~Gi~~~~~g~~--~~iG~~~~~~ 371 (562)
T TIGR01511 314 AALE----AGSEHPLAKAIVSYAKEK---GITL-------VEVSDFKAI------PGIGVEGTVEGTK--IQLGNEKLLG 371 (562)
T ss_pred HHHh----ccCCChHHHHHHHHHHhc---CCCc-------CCCCCeEEE------CCceEEEEECCEE--EEEECHHHHH
Confidence 3333 245799999999876421 0000 000001111 1223444445543 4569999886
Q ss_pred HhhccCChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCC
Q 003049 612 DRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQ 691 (853)
Q Consensus 612 ~~~~~ip~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi 691 (853)
+....++ .+.++|.+++.++. |.+++|++.++|++||+++++|++|++.|+
T Consensus 372 ~~~~~~~--------~~~~~g~~~~~~~~---------------------~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi 422 (562)
T TIGR01511 372 ENAIKID--------GKAEQGSTSVLVAV---------------------NGELAGVFALEDQLRPEAKEVIQALKRRGI 422 (562)
T ss_pred hCCCCCC--------hhhhCCCEEEEEEE---------------------CCEEEEEEEecccccHHHHHHHHHHHHcCC
Confidence 5443333 23578999888764 678999999999999999999999999999
Q ss_pred cEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcch
Q 003049 692 DLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTS 771 (853)
Q Consensus 692 ~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~ 771 (853)
+++|+|||+..+|..+|+++||.
T Consensus 423 ~v~ilSgd~~~~a~~ia~~lgi~--------------------------------------------------------- 445 (562)
T TIGR01511 423 EPVMLTGDNRKTAKAVAKELGIN--------------------------------------------------------- 445 (562)
T ss_pred eEEEEcCCCHHHHHHHHHHcCCc---------------------------------------------------------
Confidence 99999999999999999999983
Q ss_pred hHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccccCCc
Q 003049 772 AVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTK 850 (853)
Q Consensus 772 ~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~~~~ 850 (853)
+|+++.|++|..+++.+++.|+.|+|+|||.||++|+++|||||+++.+++. +...+|....++++.
T Consensus 446 ----------~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~--a~~~Advvl~~~~l~ 512 (562)
T TIGR01511 446 ----------VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDV--AIEAADVVLMRNDLN 512 (562)
T ss_pred ----------EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHH--HHhhCCEEEeCCCHH
Confidence 5788899999999999999999999999999999999999999999987764 555677777665543
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-63 Score=542.41 Aligned_cols=631 Identities=22% Similarity=0.277 Sum_probs=445.3
Q ss_pred HHHHhcCCcccccCCc---cH-HHHHHHHhhchh---HHHHHhhhhh-----hcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 003049 173 VATEKWGRNVFEYPQP---TF-QKLMKENCMEPF---FVFQVFCVGL-----WCLDEYWYYSLFTLFMLFMFESTMAKSR 240 (853)
Q Consensus 173 ~~~~~yG~N~~~~~~~---~~-~~l~~~~~~~pf---~vf~i~~~~l-----w~~~~y~~~s~~~l~~lv~~~~~~~~~~ 240 (853)
.++++|-+|++...+. +| ...+.+++...+ |++..++.+. -.+..||..-.|.+.+.++-|+....+|
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r 153 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKR 153 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3567799999887654 33 234444443322 2222222111 1234566655666666666666655555
Q ss_pred HHHHHHHHhhhcCCceEEEE-ECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeec-----ceeEEeeccCCC
Q 003049 241 LKTLTEIRRVRVDNQTIMVH-RCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILG-----GSAIVNEAILTG 314 (853)
Q Consensus 241 ~k~~~~l~~m~~~~~~v~V~-R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~-----G~~~VdES~LTG 314 (853)
++.-++.. ....+++ |+|...+ +++++.+||+|.+..++ +||||++||+ |+|.+-.-.|.|
T Consensus 154 ~~rd~~~N-----se~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~-------RVPADmilLrTsd~sg~~FiRTDQLDG 220 (1051)
T KOG0210|consen 154 RRRDRELN-----SEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDE-------RVPADMILLRTSDKSGSCFIRTDQLDG 220 (1051)
T ss_pred HHhhhhhh-----hhhheeeccCCcccc-cccccccccEEEEecCC-------cCCcceEEEEccCCCCceEEeccccCC
Confidence 44333322 1233344 6776554 99999999999999988 9999999995 789999999999
Q ss_pred CccccccccccCCC----CCccccc--------------------------cC-CCCeEEEeceEEeecCCCCCCCCCCC
Q 003049 315 ESTPQWKVSIMGRE----TGEKLSA--------------------------RR-DKSHVLFGGTKILQHTPDKTFPLKTP 363 (853)
Q Consensus 315 ES~Pv~K~~~~~~~----~~~~~~~--------------------------~~-~~~~~lf~GT~v~q~~~~~~~~~~~~ 363 (853)
|..-..|-|+|... +++.... +. .-.|+|+++|.+.
T Consensus 221 ETDWKLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvA------------- 287 (1051)
T KOG0210|consen 221 ETDWKLRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVA------------- 287 (1051)
T ss_pred cccceeeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEe-------------
Confidence 99988887775210 0010000 01 2257888888887
Q ss_pred CCcEEEEEEeeCcccchhHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHh-hhhhhcccCCCchhhHHHHHhheee
Q 003049 364 DGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAG-YVLKKGMEDPTRSKYKLFLSCSLII 442 (853)
Q Consensus 364 ~g~~~~~V~~tG~~T~~g~l~r~i~~~~~~~~~~~~~~~~fi~~ll~~ai~~~~-~~~~~~~~~~~~~~~~~~l~~~~ii 442 (853)
+|+++|+|+.||.+|.+- +. -..++.++...+.+...+..+|.++.++.+. .+...|. +..|+..+++.+.++
T Consensus 288 s~t~~gvVvYTG~dtRsv--MN-ts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~---~~~wyi~~~RfllLF 361 (1051)
T KOG0210|consen 288 SGTAIGVVVYTGRDTRSV--MN-TSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGF---GSDWYIYIIRFLLLF 361 (1051)
T ss_pred cCcEEEEEEEecccHHHH--hc-cCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcC---CCchHHHHHHHHHHH
Confidence 688999999999999421 11 1122234444566666666666666555443 3445554 346888899999999
Q ss_pred EeecCCCchHHHHHHHHHHHHHHHh----cceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecC----CC---
Q 003049 443 TSVIPPELPMELSIAVNTSLIALAR----RGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLS----NA--- 511 (853)
Q Consensus 443 ~~~vP~~Lp~~lslav~~s~~~l~k----~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~----~~--- 511 (853)
.+++|..|-+.+.+|-..-.....+ -|..+++...-|.+|+|..+.+|||||||+|+|.+++++... .+
T Consensus 362 S~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~ 441 (1051)
T KOG0210|consen 362 SSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMD 441 (1051)
T ss_pred hhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHH
Confidence 9999999999988886655444433 256778877778999999999999999999999999987421 10
Q ss_pred -------ccc---------------cccCCCCHHHHHHHHHhccceeeC---Cc---ccCCHHHHHHHhhc---Cceecc
Q 003049 512 -------ELE---------------DDMTKVPVRTQEILASCHALVFVD---NK---LVGDPLEKAALKGI---DWSYKS 560 (853)
Q Consensus 512 -------~~~---------------~~~~~~~~~~~~~la~chsl~~~~---~~---~~gdple~a~l~~~---~~~~~~ 560 (853)
... .+.+..-.+..+.+|.||.+...- |+ ....|.|.|+++++ |..+..
T Consensus 442 eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~ 521 (1051)
T KOG0210|consen 442 EVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAK 521 (1051)
T ss_pred HHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEee
Confidence 000 011111235678899999987542 22 45689999998765 333332
Q ss_pred Ccc----cccCCCCCcceEEEEEecCCCCCCceEEEEEeC--CEEEEEEcCcHHHHHHhhccCChhHHHHHHHHHhccce
Q 003049 561 DEK----AMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQ--EEFFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSR 634 (853)
Q Consensus 561 ~~~----~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~--~~~~~~~KGapE~i~~~~~~ip~~~~~~~~~~~~~G~r 634 (853)
.+. .....+....++|++.|||.|+.|||++|++.+ ++...+.|||.-.|..+. +..++.++....||++|+|
T Consensus 522 Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iV-q~NdWleEE~gNMAREGLR 600 (1051)
T KOG0210|consen 522 RDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIV-QYNDWLEEECGNMAREGLR 600 (1051)
T ss_pred cccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccc-ccchhhhhhhhhhhhhcce
Confidence 221 111223346899999999999999999999995 789999999988887664 3467888999999999999
Q ss_pred EEEEEeeeCCCCChhhhhh---------hcH---------HhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEE
Q 003049 635 VLALAFKSLPDMTVSDARS---------LHR---------DEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMI 696 (853)
Q Consensus 635 vlala~k~l~~~~~~~~~~---------~~r---------~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~mi 696 (853)
++.+|.|.+++.+++.++. .+| ..+|.||.++|+.+.||+|++|++.+++-||+|||++||+
T Consensus 601 tLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWML 680 (1051)
T KOG0210|consen 601 TLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWML 680 (1051)
T ss_pred EEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEE
Confidence 9999999998765443322 122 2689999999999999999999999999999999999999
Q ss_pred cCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcc--hhHH
Q 003049 697 TGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQT--SAVL 774 (853)
Q Consensus 697 TGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~--~~~~ 774 (853)
|||..+||+.||+..+++.++..+.... ++...... ........-..+..++|.|+.++...+. .++.
T Consensus 681 TGDKlETA~ciAkSs~L~sR~q~ihv~~---------~v~sr~da-h~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~ 750 (1051)
T KOG0210|consen 681 TGDKLETAICIAKSSRLFSRGQYIHVIR---------SVTSRGDA-HNELNNLRRKTDCALVIDGESLEFCLKYYEDEFI 750 (1051)
T ss_pred cCcchhheeeeehhccceecCceEEEEE---------ecCCchHH-HHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHH
Confidence 9999999999999999998765543221 11000000 0001112234567899999999887753 4566
Q ss_pred hhcc--cceEEEeeChhhHHHHHHHHHH-cCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCccccccccccccc
Q 003049 775 RVIP--YVKVFARVAPEQKELILTTFKA-VGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDE 847 (853)
Q Consensus 775 ~~~~--~~~VfAr~sP~qK~~iV~~Lq~-~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~ 847 (853)
++.. ...|+||++|.||+++++.||+ .|..|+.+|||.||++|+++|||||.+ .|.|..+|.-++|..+.+.
T Consensus 751 el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI-~gkEGkQASLAADfSItqF 825 (1051)
T KOG0210|consen 751 ELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGI-VGKEGKQASLAADFSITQF 825 (1051)
T ss_pred HHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceee-ecccccccchhccccHHHH
Confidence 6554 4579999999999999999998 689999999999999999999999999 5666667777777766553
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-62 Score=599.43 Aligned_cols=466 Identities=23% Similarity=0.283 Sum_probs=366.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceee
Q 003049 222 SLFTLFMLFMFESTMAKSRLKTLTEIRRV-RVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLI 300 (853)
Q Consensus 222 s~~~l~~lv~~~~~~~~~~~k~~~~l~~m-~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~il 300 (853)
+..+++++.+......+.+.|+.+.++++ ...|.+++|+|+|++++|+.++|+|||+|.|++|+ +|||||+|
T Consensus 289 ~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~-------~iP~Dg~v 361 (834)
T PRK10671 289 SAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGD-------RVPVDGEI 361 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCC-------EeeeeEEE
Confidence 34444444455555556666666666663 45678999999999999999999999999999998 99999999
Q ss_pred ecceeEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccch
Q 003049 301 LGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQ 380 (853)
Q Consensus 301 l~G~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~ 380 (853)
++|++.||||+|||||.|+.|.+ ++.+|+||.+. +|.+.+.|+++|.+|..
T Consensus 362 ~~g~~~vdeS~lTGEs~pv~k~~----------------gd~V~aGt~~~-------------~G~~~~~v~~~g~~t~l 412 (834)
T PRK10671 362 TQGEAWLDEAMLTGEPIPQQKGE----------------GDSVHAGTVVQ-------------DGSVLFRASAVGSHTTL 412 (834)
T ss_pred EEceEEEeehhhcCCCCCEecCC----------------CCEEEecceec-------------ceeEEEEEEEEcCcChH
Confidence 99999999999999999999986 67899999998 79999999999999999
Q ss_pred hHHHHHhccccccCCcc----hhhHHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCchHHHHH
Q 003049 381 GKLMRTILFSTERVTAN----SWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSI 456 (853)
Q Consensus 381 g~l~r~i~~~~~~~~~~----~~~~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp~~lsl 456 (853)
|++++.+..+...+.+. ++.+.+|+.++++++++.+++|+..+. ...+...+..++.+++++|||+|++++++
T Consensus 413 ~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~---~~~~~~~~~~a~~vlv~acPcaL~la~p~ 489 (834)
T PRK10671 413 SRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGP---APQIVYTLVIATTVLIIACPCALGLATPM 489 (834)
T ss_pred HHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---chHHHHHHHHHHHHHHHhcccchhhhHHH
Confidence 99999987765544443 344566777777777766555544331 11233456678888889999999999999
Q ss_pred HHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHhcccee
Q 003049 457 AVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVF 536 (853)
Q Consensus 457 av~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~ 536 (853)
++..++.+++|+||+++++..+|.+|++|++|||||||||+|+|+|..+...++ ......+.++ .++.
T Consensus 490 a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~---------~~~~~~l~~a--~~~e- 557 (834)
T PRK10671 490 SIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNG---------VDEAQALRLA--AALE- 557 (834)
T ss_pred HHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCC---------CCHHHHHHHH--HHHh-
Confidence 999999999999999999999999999999999999999999999998875432 1122222222 2221
Q ss_pred eCCcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEeCCEEEEEEcCcHHHHHHhhcc
Q 003049 537 VDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLTD 616 (853)
Q Consensus 537 ~~~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~~~~~~~KGapE~i~~~~~~ 616 (853)
..+.||+++|+++++... . . + .. .+|... ...++-...+++. +.+|+++.+.+....
T Consensus 558 ---~~s~hp~a~Ai~~~~~~~---~--~-~------~~-----~~~~~~-~g~Gv~~~~~g~~--~~~G~~~~~~~~~~~ 614 (834)
T PRK10671 558 ---QGSSHPLARAILDKAGDM---T--L-P------QV-----NGFRTL-RGLGVSGEAEGHA--LLLGNQALLNEQQVD 614 (834)
T ss_pred ---CCCCCHHHHHHHHHHhhC---C--C-C------Cc-----ccceEe-cceEEEEEECCEE--EEEeCHHHHHHcCCC
Confidence 345799999999875310 0 0 0 00 011111 1123333345543 356999988654332
Q ss_pred CChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEE
Q 003049 617 LPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMI 696 (853)
Q Consensus 617 ip~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~mi 696 (853)
. +...+.++.+.++|.+++.+++ |..++|++.+.|++||+++++|++|++.|++++|+
T Consensus 615 ~-~~~~~~~~~~~~~g~~~v~va~---------------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~ 672 (834)
T PRK10671 615 T-KALEAEITAQASQGATPVLLAV---------------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVML 672 (834)
T ss_pred h-HHHHHHHHHHHhCCCeEEEEEE---------------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEE
Confidence 2 3456667788999999999987 34689999999999999999999999999999999
Q ss_pred cCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhh
Q 003049 697 TGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRV 776 (853)
Q Consensus 697 TGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~ 776 (853)
|||+..+|..+|+++||.
T Consensus 673 Tgd~~~~a~~ia~~lgi~-------------------------------------------------------------- 690 (834)
T PRK10671 673 TGDNPTTANAIAKEAGID-------------------------------------------------------------- 690 (834)
T ss_pred cCCCHHHHHHHHHHcCCC--------------------------------------------------------------
Confidence 999999999999999995
Q ss_pred cccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccccCCcc
Q 003049 777 IPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKS 851 (853)
Q Consensus 777 ~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~~~~~ 851 (853)
.+|+++.|++|.++++.++..|+.|+|+|||.||++||++|||||||++|++. +...+|.+..++++..
T Consensus 691 ----~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~--a~~~ad~vl~~~~~~~ 759 (834)
T PRK10671 691 ----EVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDV--AIETAAITLMRHSLMG 759 (834)
T ss_pred ----EEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHH--HHHhCCEEEecCCHHH
Confidence 58999999999999999999999999999999999999999999999999886 5556666666665543
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-59 Score=559.32 Aligned_cols=663 Identities=22% Similarity=0.283 Sum_probs=429.9
Q ss_pred HHHhcCCcccccCCccHH----HHHHHHhhchhHHHHHhhhhhhcc---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003049 174 ATEKWGRNVFEYPQPTFQ----KLMKENCMEPFFVFQVFCVGLWCL---DEYWYYSLFTLFMLFMFESTMAKSRLKTLTE 246 (853)
Q Consensus 174 ~~~~yG~N~~~~~~~~~~----~l~~~~~~~pf~vf~i~~~~lw~~---~~y~~~s~~~l~~lv~~~~~~~~~~~k~~~~ 246 (853)
+...|-.|.+...+.+++ .-+.+|+..+-.+|-++..+|-+. .-.++.++..++ ++...+.+++.....++
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~~~~~~~~~~~pl~--~vl~~t~iKd~~eD~rR 105 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIPLSPFNPYTTLVPLL--FVLGITAIKDAIEDYRR 105 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCcccccCccceeecee--eeehHHHHHHHHhhhhh
Confidence 455899999987665433 345555555433332322222222 122333332222 22223333332222222
Q ss_pred HHh-hhcCCceEEEEECCE-EEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeec-----ceeEEeeccCCCCcccc
Q 003049 247 IRR-VRVDNQTIMVHRCGK-WVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILG-----GSAIVNEAILTGESTPQ 319 (853)
Q Consensus 247 l~~-m~~~~~~v~V~R~g~-~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~-----G~~~VdES~LTGES~Pv 319 (853)
-+. ...+..++.|.|++. +++..+++|++||+|.+..++ .+|||.+|++ |.|.|+.++|.||....
T Consensus 106 ~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~-------~~paD~llLsss~~~~~cyveT~nLDGEtnLK 178 (1151)
T KOG0206|consen 106 HKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDE-------FVPADLLLLSSSDEDGICYVETANLDGETNLK 178 (1151)
T ss_pred hhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCC-------ccccceEEecCCCCCceeEEEEeecCCccccc
Confidence 221 123346788998543 899999999999999999977 9999999996 66999999999999999
Q ss_pred ccccccCCCCC---c-cc------cccC-CCCeEEEeceEEeecCC-CCC--------CCCCCCCCcEEEEEEeeCcccc
Q 003049 320 WKVSIMGRETG---E-KL------SARR-DKSHVLFGGTKILQHTP-DKT--------FPLKTPDGGCLAVVLRTGFETS 379 (853)
Q Consensus 320 ~K~~~~~~~~~---~-~~------~~~~-~~~~~lf~GT~v~q~~~-~~~--------~~~~~~~g~~~~~V~~tG~~T~ 379 (853)
.|.+++..... + .. ..+. +..-.-|-|+.-.+... +.. +.+++ ...+.++|+-||.+|.
T Consensus 179 ~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrN-T~~v~G~vv~tG~dtK 257 (1151)
T KOG0206|consen 179 VKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRN-TEWVYGVVVFTGHDTK 257 (1151)
T ss_pred eeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceecc-CcEEEEEEEEcCCcch
Confidence 99876532110 0 00 0000 11111223333222111 000 11111 4689999999999995
Q ss_pred hhHHHHHhccccccCCcchhhHHHHHHHH----HHHHHHHH--hhhhhhc--c-------cCCC---chhhHHHHHhhee
Q 003049 380 QGKLMRTILFSTERVTANSWESGLFILFL----VVFAVIAA--GYVLKKG--M-------EDPT---RSKYKLFLSCSLI 441 (853)
Q Consensus 380 ~g~l~r~i~~~~~~~~~~~~~~~~fi~~l----l~~ai~~~--~~~~~~~--~-------~~~~---~~~~~~~l~~~~i 441 (853)
.++ .-..+..+.+...+....++..+ +.++++.+ ..+|... . ..+. ...+..++..+.+
T Consensus 258 ~~~---n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il 334 (1151)
T KOG0206|consen 258 LMQ---NSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIIL 334 (1151)
T ss_pred HHH---hcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhh
Confidence 443 33333334444333332222211 11111111 1112110 0 0001 1223446677788
Q ss_pred eEeecCCCchHHHHHHHHHHHH------HHH----hcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCC
Q 003049 442 ITSVIPPELPMELSIAVNTSLI------ALA----RRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA 511 (853)
Q Consensus 442 i~~~vP~~Lp~~lslav~~s~~------~l~----k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~ 511 (853)
+..++|..|.+.+.+.-..... .|. .....|++.+--|.+|+|+++..|||||||+|.|++......+..
T Consensus 335 ~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~ 414 (1151)
T KOG0206|consen 335 YQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTS 414 (1151)
T ss_pred hhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcc
Confidence 8889999999876654433322 121 345678888888999999999999999999999999876543211
Q ss_pred -----c---------c--------c-----cc------------cCCCCHHHHHHHHHhccceeeC-C------cccCCH
Q 003049 512 -----E---------L--------E-----DD------------MTKVPVRTQEILASCHALVFVD-N------KLVGDP 545 (853)
Q Consensus 512 -----~---------~--------~-----~~------------~~~~~~~~~~~la~chsl~~~~-~------~~~gdp 545 (853)
. . . .+ ..........++|.||++.... . .....|
T Consensus 415 yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SP 494 (1151)
T KOG0206|consen 415 YGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESP 494 (1151)
T ss_pred cccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCC
Confidence 0 0 0 00 0011134678899999987654 1 235689
Q ss_pred HHHHHHhhcC---ceeccC--cc-cccCCCCCcceEEEEEecCCCCCCceEEEEEeCC-EEEEEEcCcHHHHHHhhccC-
Q 003049 546 LEKAALKGID---WSYKSD--EK-AMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQE-EFFAFVKGAPETIQDRLTDL- 617 (853)
Q Consensus 546 le~a~l~~~~---~~~~~~--~~-~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~-~~~~~~KGapE~i~~~~~~i- 617 (853)
.|.|+++++. ..+-.. +. .....+....++++...+|+|.|||||||++.++ +..++||||+.+|.+++..-
T Consensus 495 DE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~ 574 (1151)
T KOG0206|consen 495 DEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNG 574 (1151)
T ss_pred cHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcc
Confidence 9999998763 222111 11 1122233568999999999999999999999954 89999999999999999632
Q ss_pred ---ChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhh---------cH--------HhhhcCcceeeEeeecCCCCc
Q 003049 618 ---PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSL---------HR--------DEVENGLTFAGFAVFNCPIRE 677 (853)
Q Consensus 618 ---p~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~---------~r--------~~~E~dl~f~G~l~~~d~lr~ 677 (853)
-+.-.+.+++|+.+|+|+|++|||++++.+++++... +| +.+|+||+++|..++||+|++
T Consensus 575 ~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQd 654 (1151)
T KOG0206|consen 575 EKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQD 654 (1151)
T ss_pred hHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhcc
Confidence 2334457889999999999999999998776555332 33 469999999999999999999
Q ss_pred chHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCccc------ccccch----hh
Q 003049 678 DSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETE------KIQYSE----KE 747 (853)
Q Consensus 678 ~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~------~~~~~~----~~ 747 (853)
+++++|+.|++|||++||+|||..+||++||..|+++++++..+..+..... .-...+... ....+. ..
T Consensus 655 gVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~ 733 (1151)
T KOG0206|consen 655 GVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSE-ELSSLDATAALKETLLRKFTEELEEAK 733 (1151)
T ss_pred CchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChh-hhcchhhHHHHHHHHHHhhhHHHHHHh
Confidence 9999999999999999999999999999999999999775543322221110 000111100 000000 00
Q ss_pred hccccCceeEEEehhhhHHhhcchhH---Hhhcc--cceEEEeeChhhHHHHHHHHHH-cCCEEEEEcCCcccHHHHHhC
Q 003049 748 VEGLTDAHDLCIGGDCFEMLQQTSAV---LRVIP--YVKVFARVAPEQKELILTTFKA-VGRMTLMCGDGTNDVGALKQA 821 (853)
Q Consensus 748 ~~~~~~~~~l~itG~~l~~l~~~~~~---~~~~~--~~~VfAr~sP~qK~~iV~~Lq~-~g~~v~m~GDG~ND~~ALk~A 821 (853)
.....+...++++|+.+.+..+.+.. ..+.. +..++||+||.||+.+|+..++ .+.+|+.+|||+||++|++.|
T Consensus 734 ~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~A 813 (1151)
T KOG0206|consen 734 LEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEA 813 (1151)
T ss_pred hccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeC
Confidence 01111368999999999998875332 33332 5679999999999999999984 789999999999999999999
Q ss_pred CceEEeccCCCcCcccccccccccccCCcc
Q 003049 822 HVGVALLNAVPPTQSGNSSSEASKDENTKS 851 (853)
Q Consensus 822 dVGIAl~~~~~~~~~~~~~~~~~~~~~~~~ 851 (853)
||||.+ +|.|..+|..++|.++.+.+|+.
T Consensus 814 hVGVGI-sG~EGmQAvmsSD~AIaqFrfL~ 842 (1151)
T KOG0206|consen 814 HVGVGI-SGQEGMQAVMSSDFAIAQFRFLE 842 (1151)
T ss_pred CcCeee-ccchhhhhhhcccchHHHHHHHh
Confidence 999999 57777799999999998887753
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-55 Score=469.57 Aligned_cols=439 Identities=23% Similarity=0.273 Sum_probs=329.8
Q ss_pred HHHHHhhhcCCceEEEEEC-CEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeecceeEEeeccCCCCccccccc
Q 003049 244 LTEIRRVRVDNQTIMVHRC-GKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKV 322 (853)
Q Consensus 244 ~~~l~~m~~~~~~v~V~R~-g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G~~~VdES~LTGES~Pv~K~ 322 (853)
-++||+.+.. ..++++++ |.++.+++.+|..||+|.|..|| +||+||.+++|.+.||||.+||||.||.|+
T Consensus 94 AdsLr~~~~~-~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age-------~IP~DGeVIeG~asVdESAITGESaPVire 165 (681)
T COG2216 94 ADSLRKTKTE-TIARLLRADGSIEMVPATELKKGDIVLVEAGE-------IIPSDGEVIEGVASVDESAITGESAPVIRE 165 (681)
T ss_pred HHHHHHHHHH-HHHHHhcCCCCeeeccccccccCCEEEEecCC-------CccCCCeEEeeeeecchhhccCCCcceeec
Confidence 3455543322 34556665 89999999999999999999988 999999999999999999999999999998
Q ss_pred cccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHHHHHhccccccCCcchhhHH
Q 003049 323 SIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESG 402 (853)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l~r~i~~~~~~~~~~~~~~~ 402 (853)
+- +|. +-+-+||.++ +.+.+..++....+|...+++..+..++.++++|.....
T Consensus 166 sG------------gD~-ssVtGgT~v~-------------SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~ 219 (681)
T COG2216 166 SG------------GDF-SSVTGGTRVL-------------SDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALT 219 (681)
T ss_pred cC------------CCc-ccccCCcEEe-------------eeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHH
Confidence 61 122 3488999999 689999999999999999999999888888888876544
Q ss_pred HHHHHH-HHHHHH-HHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCchHHHHHHHHHHHHHHHhcceeccCCCCccc
Q 003049 403 LFILFL-VVFAVI-AAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPF 480 (853)
Q Consensus 403 ~fi~~l-l~~ai~-~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~i~~ 480 (853)
.+...| ++|.++ +..|.+..... +..... ...+.++++.+|-...--+|.-=..++.|+.+.+++.+++.++|.
T Consensus 220 iLL~~LTliFL~~~~Tl~p~a~y~~--g~~~~i--~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEa 295 (681)
T COG2216 220 ILLSGLTLIFLLAVATLYPFAIYSG--GGAASV--TVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEA 295 (681)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHcC--CCCcCH--HHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhh
Confidence 443322 222222 22332222111 111112 222334445678776666664444568899999999999999999
Q ss_pred CccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHhccceeeCCcccCCHHHHHHHhhcCce-ec
Q 003049 481 AGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWS-YK 559 (853)
Q Consensus 481 lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~a~l~~~~~~-~~ 559 (853)
+|.||++..|||||+|-|+-.-..+.+.++. ..+.+.-.|.-.|+. |.. |--+.+++.+... ..
T Consensus 296 aGDvdtliLDKTGTIT~GnR~A~~f~p~~gv---------~~~~la~aa~lsSl~--DeT----pEGrSIV~LA~~~~~~ 360 (681)
T COG2216 296 AGDVDTLLLDKTGTITLGNRQASEFIPVPGV---------SEEELADAAQLASLA--DET----PEGRSIVELAKKLGIE 360 (681)
T ss_pred cCCccEEEecccCceeecchhhhheecCCCC---------CHHHHHHHHHHhhhc--cCC----CCcccHHHHHHHhccC
Confidence 9999999999999999998887777766542 222222222222322 222 2223333332211 00
Q ss_pred cCcccccCCCCCcceE-EEEEecCCCCCCceEEEEEeCCEEEEEEcCcHHHHHHhhc----cCChhHHHHHHHHHhccce
Q 003049 560 SDEKAMPKRGGGNAVQ-IVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLT----DLPSSYIETYKKYTHQGSR 634 (853)
Q Consensus 560 ~~~~~~~~~~~~~~~~-i~~~~~F~s~~krmsvi~~~~~~~~~~~KGapE~i~~~~~----~ip~~~~~~~~~~~~~G~r 634 (853)
.+. .... -..-.||+.+. |||-+-..++ .-+-|||+..++.... ++|++.+..+++-++.|-.
T Consensus 361 ~~~---------~~~~~~~~fvpFtA~T-RmSGvd~~~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGT 428 (681)
T COG2216 361 LRE---------DDLQSHAEFVPFTAQT-RMSGVDLPGG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGT 428 (681)
T ss_pred CCc---------ccccccceeeecceec-ccccccCCCC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCC
Confidence 000 0000 12456897664 5655443333 4567999999998874 4899999999999999999
Q ss_pred EEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 635 VLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 635 vlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.|+++. |-.++|.+.++|-+||+.+|-+.+||+.||+++|+||||+.||..||+|.|+.
T Consensus 429 PL~V~~---------------------~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD 487 (681)
T COG2216 429 PLVVVE---------------------NGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD 487 (681)
T ss_pred ceEEEE---------------------CCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch
Confidence 999875 56899999999999999999999999999999999999999999999999996
Q ss_pred CCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHH
Q 003049 715 TKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELI 794 (853)
Q Consensus 715 ~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~i 794 (853)
...|+++||+|.++
T Consensus 488 ------------------------------------------------------------------dfiAeatPEdK~~~ 501 (681)
T COG2216 488 ------------------------------------------------------------------DFIAEATPEDKLAL 501 (681)
T ss_pred ------------------------------------------------------------------hhhhcCChHHHHHH
Confidence 36789999999999
Q ss_pred HHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcC
Q 003049 795 LTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPT 834 (853)
Q Consensus 795 V~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~ 834 (853)
|+.-|..|+.|+|||||+||+|||.|||||+||.+|+..+
T Consensus 502 I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqAA 541 (681)
T COG2216 502 IRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAA 541 (681)
T ss_pred HHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhccccHHH
Confidence 9999999999999999999999999999999999999864
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.3e-32 Score=282.25 Aligned_cols=222 Identities=25% Similarity=0.442 Sum_probs=171.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh-cCCce-EEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeec-c
Q 003049 227 FMLFMFESTMAKSRLKTLTEIRRVR-VDNQT-IMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILG-G 303 (853)
Q Consensus 227 ~~lv~~~~~~~~~~~k~~~~l~~m~-~~~~~-v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~-G 303 (853)
+++++......+++.|+.+.++++. ..+.+ +.|+|||+|++++++||+|||+|.+++|+ .+||||+|++ |
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~-------~vPaD~~ll~~g 76 (230)
T PF00122_consen 4 FLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGD-------IVPADGILLESG 76 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTE-------BESSEEEEEESS
T ss_pred EEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeeccccc-------ccccCccceecc
Confidence 3334444445555556656665542 23334 99999999999999999999999999988 9999999999 9
Q ss_pred eeEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHH
Q 003049 304 SAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKL 383 (853)
Q Consensus 304 ~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l 383 (853)
.+.||||.||||+.|+.|.+. ..+.++.+|+||.+. +|.+.++|++||.+|..|++
T Consensus 77 ~~~vd~s~ltGes~pv~k~~~-----------~~~~~~~i~~Gs~v~-------------~g~~~~~Vi~tG~~t~~~~~ 132 (230)
T PF00122_consen 77 SAYVDESALTGESEPVKKTPL-----------PLNPGNIIFAGSIVV-------------SGWGIGVVIATGSDTKLGRI 132 (230)
T ss_dssp EEEEECHHHHSBSSEEEESSS-----------CCCTTTEE-TTEEEE-------------EEEEEEEEEE-GGGSHHHHH
T ss_pred ccccccccccccccccccccc-----------cccccchhhcccccc-------------ccccccccceeeeccccccc
Confidence 999999999999999999863 124589999999999 68999999999999999999
Q ss_pred HHHhccccccCCcchhhHHHHHHHHHHHHHHHHhhhhhhccc-CCCchhhHHHHHhheeeEeecCCCchHHHHHHHHHHH
Q 003049 384 MRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGME-DPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSL 462 (853)
Q Consensus 384 ~r~i~~~~~~~~~~~~~~~~fi~~ll~~ai~~~~~~~~~~~~-~~~~~~~~~~l~~~~ii~~~vP~~Lp~~lslav~~s~ 462 (853)
.+.+..+..+.+..++....+...++.++++.+.+.+..+.. ....++...+..++.+++.++|++||+.++++...+.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~ 212 (230)
T PF00122_consen 133 LQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAA 212 (230)
T ss_dssp HHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHH
T ss_pred ccccccccccchhhhhhhHHHHHHHHhcccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHH
Confidence 999887776667676666655555443333332222222111 2356778889999999999999999999999999999
Q ss_pred HHHHhcceeccCCCCcc
Q 003049 463 IALARRGIFCTEPFRIP 479 (853)
Q Consensus 463 ~~l~k~~I~~~~~~~i~ 479 (853)
.+|.|+||+|+++..+|
T Consensus 213 ~~~~~~~i~v~~~~a~E 229 (230)
T PF00122_consen 213 RRLAKNGIIVKNLSALE 229 (230)
T ss_dssp HHHHHTTEEESSTTHHH
T ss_pred HHHHHCCEEEeCccccc
Confidence 99999999999998876
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.1e-26 Score=236.19 Aligned_cols=211 Identities=31% Similarity=0.376 Sum_probs=150.9
Q ss_pred ccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHhccceeeCCcccCCHHHHHHHhhcCceeccCcc
Q 003049 484 VDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEK 563 (853)
Q Consensus 484 vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~a~l~~~~~~~~~~~~ 563 (853)
|+++|||||||||++++.+ .. ........++.+. . ..+.||+..++..+.......
T Consensus 1 i~~i~fDktGTLt~~~~~v---~~------------~~~~~~~~~~~~~--~----~~s~~p~~~~~~~~~~~~~~~--- 56 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV---AP------------PSNEAALAIAAAL--E----QGSEHPIGKAIVEFAKNHQWS--- 56 (215)
T ss_dssp ESEEEEECCTTTBESHHEE---ES------------CSHHHHHHHHHHH--H----CTSTSHHHHHHHHHHHHHHHH---
T ss_pred CeEEEEecCCCcccCeEEE---Ee------------ccHHHHHHHHHHh--h----hcCCCcchhhhhhhhhhccch---
Confidence 6899999999999999998 10 1122222222222 1 345789999998876432100
Q ss_pred cccCCCCCcceEEEEEecCCCCCCceEEEEEeCCEEEEEEcCcHHHHHHhhccCChhHHHHHHHHHhccceEEEEEeeeC
Q 003049 564 AMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSL 643 (853)
Q Consensus 564 ~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~~~~~~~KGapE~i~~~~~~ip~~~~~~~~~~~~~G~rvlala~k~l 643 (853)
. . +.-...++ .++ ......+. +. |+++.+....... ............+|.+++.++.
T Consensus 57 ----~---~-~~~~~~~~-----~~~-~~~~~~~~---~~-g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--- 114 (215)
T PF00702_consen 57 ----K---S-LESFSEFI-----GRG-ISGDVDGI---YL-GSPEWIHELGIRV-ISPDLVEEIQESQGRTVIVLAV--- 114 (215)
T ss_dssp ----S---C-CEEEEEET-----TTE-EEEEEHCH---EE-HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCEEEEE---
T ss_pred ----h---h-hhhheeee-----ecc-cccccccc---cc-ccchhhhhccccc-cccchhhhHHHhhCCcccceee---
Confidence 0 0 11111111 111 11111111 22 9999998877442 1222333344666777776664
Q ss_pred CCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEcc
Q 003049 644 PDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCP 723 (853)
Q Consensus 644 ~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~ 723 (853)
++.++|.+.+.|++||+++++|++|+++|++++|+|||+..+|.++|+++||.+.
T Consensus 115 ------------------~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~------- 169 (215)
T PF00702_consen 115 ------------------NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS------- 169 (215)
T ss_dssp ------------------SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE-------
T ss_pred ------------------cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc-------
Confidence 6789999999999999999999999999999999999999999999999999521
Q ss_pred CCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEEee--ChhhH--HHHHHHHH
Q 003049 724 VKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARV--APEQK--ELILTTFK 799 (853)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~--sP~qK--~~iV~~Lq 799 (853)
.|||++ +|++| ..+++.||
T Consensus 170 ---------------------------------------------------------~v~a~~~~kP~~k~~~~~i~~l~ 192 (215)
T PF00702_consen 170 ---------------------------------------------------------IVFARVIGKPEPKIFLRIIKELQ 192 (215)
T ss_dssp ---------------------------------------------------------EEEESHETTTHHHHHHHHHHHHT
T ss_pred ---------------------------------------------------------cccccccccccchhHHHHHHHHh
Confidence 699999 99999 99999999
Q ss_pred HcCCEEEEEcCCcccHHHHHhCC
Q 003049 800 AVGRMTLMCGDGTNDVGALKQAH 822 (853)
Q Consensus 800 ~~g~~v~m~GDG~ND~~ALk~Ad 822 (853)
..++.|+|+|||.||++|||+||
T Consensus 193 ~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 193 VKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp CTGGGEEEEESSGGHHHHHHHSS
T ss_pred cCCCEEEEEccCHHHHHHHHhCc
Confidence 77779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.6e-13 Score=123.88 Aligned_cols=101 Identities=25% Similarity=0.367 Sum_probs=91.9
Q ss_pred ceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCccccccc
Q 003049 664 TFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQY 743 (853)
Q Consensus 664 ~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~ 743 (853)
...+.++---++=++++++|++|++. +++.+.|||..-+-...|+-+||...
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 34566666777888999999999999 99999999999999999999998632
Q ss_pred chhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCc
Q 003049 744 SEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHV 823 (853)
Q Consensus 744 ~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdV 823 (853)
+|||...|+.|..+|+.|++.++.|.|+|||+||.+||+.||+
T Consensus 72 -------------------------------------rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADl 114 (152)
T COG4087 72 -------------------------------------RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADL 114 (152)
T ss_pred -------------------------------------eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhccc
Confidence 7999999999999999999999999999999999999999999
Q ss_pred eEEecc
Q 003049 824 GVALLN 829 (853)
Q Consensus 824 GIAl~~ 829 (853)
||-...
T Consensus 115 GI~tiq 120 (152)
T COG4087 115 GICTIQ 120 (152)
T ss_pred ceEEec
Confidence 997753
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.21 E-value=1e-11 Score=109.97 Aligned_cols=73 Identities=40% Similarity=0.496 Sum_probs=56.6
Q ss_pred ccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEeCCEEEEEEcCcHHHHHHhhccC
Q 003049 541 LVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLTDL 617 (853)
Q Consensus 541 ~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~~~~~~~KGapE~i~~~~~~i 617 (853)
..|||.|.|++.++.+.-...+ .......+++++.+||+|++|||+|+++.++.+++++|||||.|+++|+.+
T Consensus 19 ~~G~ptE~ALl~~~~~~g~~~~----~~~~~~~~~~~~~~pF~S~rK~msvv~~~~~~~~~~~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 19 IIGDPTEKALLRFAKKLGVGID----IKEIRSKYKIVAEIPFDSERKRMSVVVRNDGKYILYVKGAPEVILDRCTHI 91 (91)
T ss_pred ccCCcCHHHHHHHHHHcCCCCc----HHHHHhhcceeEEEccCcccceeEEEEeCCCEEEEEcCCChHHHHHhcCCC
Confidence 8999999999999764311101 111235688999999999999999999943457779999999999999763
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.1e-08 Score=105.01 Aligned_cols=103 Identities=17% Similarity=0.159 Sum_probs=80.9
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCC--CeEEEccCCCCceeEeecCCcccccccchhhhccc
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK--PVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGL 751 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~--~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (853)
+++|++++.|+.|++.+ +++++||-....+..+++++||..- +.+..+.
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~---------------------------- 118 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDD---------------------------- 118 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEec----------------------------
Confidence 68999999999999975 9999999999999999999999621 0000000
Q ss_pred cCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccC
Q 003049 752 TDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNA 830 (853)
Q Consensus 752 ~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~ 830 (853)
.-.+||. .. ..|+.|..+++.+++.|..+.|+|||.||.+|++.|++||++...
T Consensus 119 ----~g~~tG~-------------------~~--~~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak 172 (203)
T TIGR02137 119 ----SDRVVGY-------------------QL--RQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAP 172 (203)
T ss_pred ----CCeeECe-------------------ee--cCcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCC
Confidence 0012332 11 357889999999999998899999999999999999999999543
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.61 E-value=2.5e-07 Score=95.42 Aligned_cols=108 Identities=21% Similarity=0.271 Sum_probs=84.3
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
.+++|++.+.++.++++|++|+++||-...-+..+|+++|+...-...+..
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~----------------------------- 126 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEI----------------------------- 126 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEE-----------------------------
Confidence 689999999999999999999999999999999999999997421111100
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEeeCh-hhHHHHHHHHHH-cCCE---EEEEcCCcccHHHHHhCCceEEe
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAP-EQKELILTTFKA-VGRM---TLMCGDGTNDVGALKQAHVGVAL 827 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP-~qK~~iV~~Lq~-~g~~---v~m~GDG~ND~~ALk~AdVGIAl 827 (853)
.+ . ++|| +|..+... +.|...++.+.+ .|.. +.++|||.||.|+|+.|+.+|++
T Consensus 127 ~d-G-~ltG-------------------~v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~ 185 (212)
T COG0560 127 DD-G-KLTG-------------------RVVGPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAV 185 (212)
T ss_pred eC-C-EEec-------------------eeeeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEe
Confidence 01 1 4555 45655555 789988866655 5665 89999999999999999999999
Q ss_pred ccC
Q 003049 828 LNA 830 (853)
Q Consensus 828 ~~~ 830 (853)
...
T Consensus 186 n~~ 188 (212)
T COG0560 186 NPK 188 (212)
T ss_pred CcC
Confidence 543
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.51 E-value=4.5e-07 Score=94.11 Aligned_cols=167 Identities=13% Similarity=0.094 Sum_probs=98.4
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCC-----CeEEEccCCCCceeEeecCCccccccc--ch
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK-----PVLILCPVKNGKVYEWVSPDETEKIQY--SE 745 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~-----~~~il~~~~~~~~~~~~~~~~~~~~~~--~~ 745 (853)
..+-+.+.++|++|++.|++++++||.+...+..+++++++... ..++.+..+ .+.+........... ..
T Consensus 17 ~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~---~~~~~~~~~~~~~~~~~~~ 93 (215)
T TIGR01487 17 RMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKE---DIFLANMEEEWFLDEEKKK 93 (215)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCC---cEEEecccchhhHHHhhhh
Confidence 34888999999999999999999999999999999999997521 223333211 122211111100000 00
Q ss_pred ----hhh-ccccCc-eeEEEehhhhHHhhcchhHHhhcccce-----EEEeeC--hhhHHHHHHHHHH-cCC---EEEEE
Q 003049 746 ----KEV-EGLTDA-HDLCIGGDCFEMLQQTSAVLRVIPYVK-----VFARVA--PEQKELILTTFKA-VGR---MTLMC 808 (853)
Q Consensus 746 ----~~~-~~~~~~-~~l~itG~~l~~l~~~~~~~~~~~~~~-----VfAr~s--P~qK~~iV~~Lq~-~g~---~v~m~ 808 (853)
... ...... ..+..+++..+.+.. .+... ... .+..+. ...|...++.+.+ .|. .++|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~--~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~i 169 (215)
T TIGR01487 94 RFPRDRLSNEYPRASLVIMREGKDVDEVRE--IIKER--GLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAI 169 (215)
T ss_pred hhhhhhcccccceeEEEEecCCccHHHHHH--HHHhC--CeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 000 000011 111223333222221 11110 111 122333 3589988888765 343 48999
Q ss_pred cCCcccHHHHHhCCceEEeccCCCcCcccccccccccc
Q 003049 809 GDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKD 846 (853)
Q Consensus 809 GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~ 846 (853)
||+.||.+|++.|+.|+||+++.+..++.++.++..++
T Consensus 170 GDs~ND~~ml~~ag~~vam~na~~~~k~~A~~v~~~~~ 207 (215)
T TIGR01487 170 GDSENDIDLFRVVGFKVAVANADDQLKEIADYVTSNPY 207 (215)
T ss_pred CCCHHHHHHHHhCCCeEEcCCccHHHHHhCCEEcCCCC
Confidence 99999999999999999999999886666555554333
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=3.9e-07 Score=99.86 Aligned_cols=114 Identities=22% Similarity=0.336 Sum_probs=81.1
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
-++.|++.+.|+.|++.|+++.++||.....+..+.+++|+..- .. +.+..
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~----~a-----n~lei-------------------- 230 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAA----VA-----NELEI-------------------- 230 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeE----EE-----eEEEE--------------------
Confidence 36899999999999999999999999998888999999998521 00 00000
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEec
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALL 828 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~ 828 (853)
.+-.+||.... .+ +..+.|...++.+.+ .| ..+.|+|||.||.+|++.|++|||+
T Consensus 231 --~dg~ltg~v~g---------------~i---v~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~- 289 (322)
T PRK11133 231 --MDGKLTGNVLG---------------DI---VDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY- 289 (322)
T ss_pred --ECCEEEeEecC---------------cc---CCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-
Confidence 00011221100 00 234678888887765 44 5699999999999999999999999
Q ss_pred cCCCcCcc
Q 003049 829 NAVPPTQS 836 (853)
Q Consensus 829 ~~~~~~~~ 836 (853)
++.+..++
T Consensus 290 nAkp~Vk~ 297 (322)
T PRK11133 290 HAKPKVNE 297 (322)
T ss_pred CCCHHHHh
Confidence 77776433
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.43 E-value=2.3e-06 Score=91.78 Aligned_cols=175 Identities=21% Similarity=0.224 Sum_probs=99.3
Q ss_pred eEeeecCC-CCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC-----CCeEEEccCCCCceeEeecCCcccc
Q 003049 667 GFAVFNCP-IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT-----KPVLILCPVKNGKVYEWVSPDETEK 740 (853)
Q Consensus 667 G~l~~~d~-lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~-----~~~~il~~~~~~~~~~~~~~~~~~~ 740 (853)
|.+.-.+. +.+.++++|+++++.|++++++||.....+..+.+++++.. +...+.... ..+.-...+....
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~---~~i~~~~l~~~~~ 88 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGG---ELLFQKPLSREDV 88 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCC---cEEeeecCCHHHH
Confidence 33334444 89999999999999999999999999999999999999974 122222210 0000000000000
Q ss_pred ------------c---cc-------------ch-------------hhhccccC--ceeEEEehhhhHHhhcchhHHhhc
Q 003049 741 ------------I---QY-------------SE-------------KEVEGLTD--AHDLCIGGDCFEMLQQTSAVLRVI 777 (853)
Q Consensus 741 ------------~---~~-------------~~-------------~~~~~~~~--~~~l~itG~~l~~l~~~~~~~~~~ 777 (853)
. .. .. ........ ...+...-+.+..+. ..+.+..
T Consensus 89 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~ 166 (264)
T COG0561 89 EELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELV--EALRKRF 166 (264)
T ss_pred HHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHH--HHHhhhc
Confidence 0 00 00 00000000 000111111111111 1122222
Q ss_pred c-cceEEEeeCh---------hhHHHHHHHHHH-cCCE---EEEEcCCcccHHHHHhCCceEEeccCCCcCccccccccc
Q 003049 778 P-YVKVFARVAP---------EQKELILTTFKA-VGRM---TLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEA 843 (853)
Q Consensus 778 ~-~~~VfAr~sP---------~qK~~iV~~Lq~-~g~~---v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~ 843 (853)
. ....+.+..| ..|..-++.|.+ .|.. |+++||+.||.+||+.|..||||++|.+..++.++..+.
T Consensus 167 ~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~ 246 (264)
T COG0561 167 PDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTT 246 (264)
T ss_pred cccceEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccC
Confidence 2 2233333333 369888888876 6665 999999999999999999999999998876555554434
Q ss_pred ccc
Q 003049 844 SKD 846 (853)
Q Consensus 844 ~~~ 846 (853)
.++
T Consensus 247 ~n~ 249 (264)
T COG0561 247 SND 249 (264)
T ss_pred Ccc
Confidence 443
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=98.41 E-value=2.3e-07 Score=77.76 Aligned_cols=61 Identities=16% Similarity=0.322 Sum_probs=51.1
Q ss_pred CCcccccccc--ccCCCCcHHHHHHHHHhcCCccccc-CCccHHHHHHHHhhchhHHHHHhhhhh
Q 003049 151 PTKETFGYYL--KCTGHSTEAKIAVATEKWGRNVFEY-PQPTFQKLMKENCMEPFFVFQVFCVGL 212 (853)
Q Consensus 151 ~~~~~~~~~~--~~~GLs~~~~~~~~~~~yG~N~~~~-~~~~~~~l~~~~~~~pf~vf~i~~~~l 212 (853)
+.++.++.++ ...||+++ |+++|+++||+|++.. +.++++.+|.+++.+||.++++++.++
T Consensus 5 ~~~~v~~~l~t~~~~GLs~~-ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aail 68 (69)
T PF00690_consen 5 SVEEVLKRLNTSSSQGLSSE-EVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAIL 68 (69)
T ss_dssp SHHHHHHHHTTBTSSBBTHH-HHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHH
T ss_pred CHHHHHHHHCcCCCCCCCHH-HHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4455566675 36899997 9999999999999954 567999999999999999998887765
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=4.4e-06 Score=89.83 Aligned_cols=59 Identities=27% Similarity=0.347 Sum_probs=46.8
Q ss_pred hhHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEeccCCCcCccccccccccccc
Q 003049 789 EQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDE 847 (853)
Q Consensus 789 ~qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~ 847 (853)
-.|..-++.|.+ .| ..|+++|||.||.+||+.|++||||++|.+..++.++.++..+++
T Consensus 195 vsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~ 257 (270)
T PRK10513 195 VNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLE 257 (270)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCc
Confidence 368777777765 34 348999999999999999999999999999877766666554443
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.36 E-value=7.1e-07 Score=88.49 Aligned_cols=95 Identities=18% Similarity=0.181 Sum_probs=72.4
Q ss_pred HHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEe
Q 003049 681 KILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIG 760 (853)
Q Consensus 681 ~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~it 760 (853)
..|+.|++.|+++.++|+.+...+....+.+|+..
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~--------------------------------------------- 75 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR--------------------------------------------- 75 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------------------------
Confidence 68999999999999999999999999999999961
Q ss_pred hhhhHHhhcchhHHhhcccceEEEee--ChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccc
Q 003049 761 GDCFEMLQQTSAVLRVIPYVKVFARV--APEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGN 838 (853)
Q Consensus 761 G~~l~~l~~~~~~~~~~~~~~VfAr~--sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~ 838 (853)
.|... .|+--..+++.++-....++|+||+.||.+|++.|++++||.++.+..++..
T Consensus 76 ---------------------~f~~~kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A 134 (169)
T TIGR02726 76 ---------------------FHEGIKKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAA 134 (169)
T ss_pred ---------------------EEecCCCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhC
Confidence 11111 2333344444443333569999999999999999999999999988755444
Q ss_pred ccc
Q 003049 839 SSS 841 (853)
Q Consensus 839 ~~~ 841 (853)
+.+
T Consensus 135 ~~I 137 (169)
T TIGR02726 135 AYV 137 (169)
T ss_pred CEE
Confidence 333
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.4e-06 Score=91.38 Aligned_cols=169 Identities=14% Similarity=0.082 Sum_probs=94.2
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCC-----CeEEEccCCCCceeEeecCCccc-ccccchhh
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK-----PVLILCPVKNGKVYEWVSPDETE-KIQYSEKE 747 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~-----~~~il~~~~~~~~~~~~~~~~~~-~~~~~~~~ 747 (853)
++-+.+.++|++|++.|++++++||.....+..+++++|+... ...+.+...+ ..+.....+... .+..-...
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDG-KRIFLGDIEECEKAYSELKKR 98 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCC-CEEEEcchHHHHHHHHHHHHh
Confidence 3788999999999999999999999999999999999998521 1222221111 111111111000 00000000
Q ss_pred h-------ccccC---ceeEE-EehhhhHHhhcchhHHhhcccce-----EEEeeChhh--HHHHHHHHHH-cC---CEE
Q 003049 748 V-------EGLTD---AHDLC-IGGDCFEMLQQTSAVLRVIPYVK-----VFARVAPEQ--KELILTTFKA-VG---RMT 805 (853)
Q Consensus 748 ~-------~~~~~---~~~l~-itG~~l~~l~~~~~~~~~~~~~~-----VfAr~sP~q--K~~iV~~Lq~-~g---~~v 805 (853)
. ..... ...+. .+....+.+. +.+.+.-.... .+....|.. |..-++.+.+ .| ..+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~ 176 (230)
T PRK01158 99 FPEASTSLTKLDPDYRKTEVALRRTVPVEEVR--ELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEV 176 (230)
T ss_pred ccccceeeecCCcccccceeeecccccHHHHH--HHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHE
Confidence 0 00000 00111 1111111111 11111111111 233555554 8887777765 33 348
Q ss_pred EEEcCCcccHHHHHhCCceEEeccCCCcCccccccccccc
Q 003049 806 LMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASK 845 (853)
Q Consensus 806 ~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~ 845 (853)
+++|||.||.+|++.|++|+||+++.+..++.+..++..+
T Consensus 177 i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n 216 (230)
T PRK01158 177 AAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKS 216 (230)
T ss_pred EEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCC
Confidence 9999999999999999999999999998666555544433
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.2e-06 Score=91.23 Aligned_cols=125 Identities=24% Similarity=0.306 Sum_probs=83.5
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
+++|++++.++.|++.|+++.++||.+...+..+++.+|+..- +.. .+.+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~----~~~-----~~~~~-------------------- 135 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAA----FAN-----RLEVE-------------------- 135 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce----Eee-----EEEEE--------------------
Confidence 6899999999999999999999999999999999999998631 000 00000
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEe-eChhhHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEec
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFAR-VAPEQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALL 828 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr-~sP~qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~ 828 (853)
+-.++|. +.++ ..+..|..+++.+.+ .| ..+.|+||+.||..|+++|++++++.
T Consensus 136 --~~~~~~~-------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~ 194 (219)
T TIGR00338 136 --DGKLTGL-------------------VEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN 194 (219)
T ss_pred --CCEEEEE-------------------ecCcccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC
Confidence 0001110 1111 123346666665544 33 24889999999999999999999984
Q ss_pred cCCCcCcccccccccccccCCcc
Q 003049 829 NAVPPTQSGNSSSEASKDENTKS 851 (853)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~ 851 (853)
+.+ .....++.++.+.+|.+
T Consensus 195 -~~~--~~~~~a~~~i~~~~~~~ 214 (219)
T TIGR00338 195 -AKP--KLQQKADICINKKDLTD 214 (219)
T ss_pred -CCH--HHHHhchhccCCCCHHH
Confidence 333 24445666666665543
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.4e-06 Score=88.24 Aligned_cols=92 Identities=17% Similarity=0.176 Sum_probs=71.4
Q ss_pred cchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCcee
Q 003049 677 EDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHD 756 (853)
Q Consensus 677 ~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 756 (853)
+++.+.|+.++++|++++++||+....+.++|+.+|+......-... ...
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~-~~~----------------------------- 141 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL-FDN----------------------------- 141 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE-ECT-----------------------------
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee-eec-----------------------------
Confidence 78889999999999999999999999999999999997432111100 000
Q ss_pred EEEehhhhHHhhcchhHHhhcccceEEEeeChh-h--HHHHHHHH------HHcCCEEEEEcCCcccHHHHH
Q 003049 757 LCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPE-Q--KELILTTF------KAVGRMTLMCGDGTNDVGALK 819 (853)
Q Consensus 757 l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~-q--K~~iV~~L------q~~g~~v~m~GDG~ND~~ALk 819 (853)
......+|.+|. + |...++.+ +.....+.++|||.||.+|||
T Consensus 142 ---------------------~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 142 ---------------------GGGIFTGRITGSNCGGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp ---------------------TCCEEEEEEEEEEESHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred ---------------------ccceeeeeECCCCCCcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 012456677766 4 99999999 445788999999999999997
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.9e-06 Score=84.52 Aligned_cols=87 Identities=17% Similarity=0.184 Sum_probs=66.8
Q ss_pred HHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEeh
Q 003049 682 ILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGG 761 (853)
Q Consensus 682 ~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG 761 (853)
+|++|++.|+++.++||++...+..+++++|+..
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------------------------- 69 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------------------------- 69 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE----------------------------------------------
Confidence 8999999999999999999999999999999851
Q ss_pred hhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHH-HHc---CCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcc
Q 003049 762 DCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTF-KAV---GRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQS 836 (853)
Q Consensus 762 ~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~L-q~~---g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~ 836 (853)
.|... ..|...++.+ ++. ...++|+||+.||.+|++.|++++++.++.+..+.
T Consensus 70 --------------------~~~~~--~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~ 126 (154)
T TIGR01670 70 --------------------LYQGQ--SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIP 126 (154)
T ss_pred --------------------EEecc--cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHH
Confidence 11111 1233333333 333 35699999999999999999999999988775433
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=9.3e-06 Score=87.50 Aligned_cols=166 Identities=17% Similarity=0.181 Sum_probs=95.1
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC-----CCeEEEccCCCCc-------------------
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT-----KPVLILCPVKNGK------------------- 728 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~-----~~~~il~~~~~~~------------------- 728 (853)
..+-+.++++|++|++.|+++++.||.+...+..+.+++|+.. +...+.+..+...
T Consensus 18 ~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~ 97 (272)
T PRK15126 18 HHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWD 97 (272)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhh
Confidence 4588999999999999999999999999999999999999852 2233332111000
Q ss_pred ---eeEeecCCcccccccchhh---------------hccc--cCceeEEEehh--hhHHhhcchhHHhhcc-cceE---
Q 003049 729 ---VYEWVSPDETEKIQYSEKE---------------VEGL--TDAHDLCIGGD--CFEMLQQTSAVLRVIP-YVKV--- 782 (853)
Q Consensus 729 ---~~~~~~~~~~~~~~~~~~~---------------~~~~--~~~~~l~itG~--~l~~l~~~~~~~~~~~-~~~V--- 782 (853)
.+.+...+........... ...+ ..-..+++-++ .++.+. ..+.+.+. ...+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~--~~l~~~~~~~~~~~~s 175 (272)
T PRK15126 98 TRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQ--IQLNEALGERAHLCFS 175 (272)
T ss_pred cCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHH--HHHHHHhcCCEEEEEc
Confidence 0000000000000000000 0000 00112222221 111111 11222221 1121
Q ss_pred ---EEeeChh--hHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccc
Q 003049 783 ---FARVAPE--QKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSS 840 (853)
Q Consensus 783 ---fAr~sP~--qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~ 840 (853)
+-.+.|. .|..-++.|.+ .| ..|+.+|||-||.+||+.|+.||||++|.+..++.++.
T Consensus 176 ~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~ 242 (272)
T PRK15126 176 ATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPH 242 (272)
T ss_pred CCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCC
Confidence 2345555 49888888865 34 35899999999999999999999999999987665543
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.25 E-value=2.6e-06 Score=88.94 Aligned_cols=170 Identities=16% Similarity=0.154 Sum_probs=95.1
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCC-----CeEEEccCCCCceeEeec-CCcccc------c
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK-----PVLILCPVKNGKVYEWVS-PDETEK------I 741 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~-----~~~il~~~~~~~~~~~~~-~~~~~~------~ 741 (853)
.+-+.++++|++|++.|++++++||.+...+..+++++|+... ...+.+... ....|.. .+.... .
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~--~~~~~~~~~~~~~~~~~~~~~ 92 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEG--MDDIFLAYLEEEWFLDIVIAK 92 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCC--CceEEecccCHHHHHHHHHhc
Confidence 4778899999999999999999999999999999999995321 112222111 0112221 111000 0
Q ss_pred ccc-hhhhcccc-CceeEE-EehhhhHHhhcchhHHhhcccce-----EEEeeCh--hhHHHHHHHHHH-cC---CEEEE
Q 003049 742 QYS-EKEVEGLT-DAHDLC-IGGDCFEMLQQTSAVLRVIPYVK-----VFARVAP--EQKELILTTFKA-VG---RMTLM 807 (853)
Q Consensus 742 ~~~-~~~~~~~~-~~~~l~-itG~~l~~l~~~~~~~~~~~~~~-----VfAr~sP--~qK~~iV~~Lq~-~g---~~v~m 807 (853)
... ........ ...... ......+.+.. .+..+-.... .+....| ..|..-++.+.+ .| ..|++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~ 170 (225)
T TIGR01482 93 TFPFSRLKVQYPRRASLVKMRYGIDVDTVRE--IIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLV 170 (225)
T ss_pred ccchhhhccccccccceEEEeecCCHHHHHH--HHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEE
Confidence 000 00000000 001111 11111111110 0111101111 1233444 378888877755 34 45899
Q ss_pred EcCCcccHHHHHhCCceEEeccCCCcCccccccccccccc
Q 003049 808 CGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDE 847 (853)
Q Consensus 808 ~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~ 847 (853)
+||+.||.+||+.|++|+||+++.+..++.++..+..+++
T Consensus 171 ~GD~~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~ 210 (225)
T TIGR01482 171 CGDSENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYG 210 (225)
T ss_pred ECCCHhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCC
Confidence 9999999999999999999999999866666656554443
|
catalyze the same reaction as SPP. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.24 E-value=5e-06 Score=86.23 Aligned_cols=112 Identities=15% Similarity=0.158 Sum_probs=76.9
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
.+++|++.+.++.|++.|+++.++||.....+..+.+.++.... +...
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~---i~~n----------------------------- 116 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDR---IYCN----------------------------- 116 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCccc---EEec-----------------------------
Confidence 57899999999999999999999999999999999988744211 1100
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEE--EeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEec
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVF--ARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALL 828 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~Vf--Ar~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~ 828 (853)
.+.++|..+..-. ++-..+ .......|..+++.++.....+.|+|||.||..|++.||+++|=+
T Consensus 117 ---~~~~~~~~~~~~~---------p~~~~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 117 ---EADFSNEYIHIDW---------PHPCDGTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD 182 (214)
T ss_pred ---eeEeeCCeeEEeC---------CCCCccccccCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH
Confidence 0011111100000 000000 001134799999999888888999999999999999999988754
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.23 E-value=6.5e-06 Score=84.13 Aligned_cols=109 Identities=20% Similarity=0.211 Sum_probs=77.5
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
+++|++.+.++.|++.|+++.++||-....+..+++.+|+..--...+...+..
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g-------------------------- 133 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKG-------------------------- 133 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCC--------------------------
Confidence 689999999999999999999999999999999999999742100000000000
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEecc
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLN 829 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~ 829 (853)
..++ ..+-.+.|..|..+++.+.+ .| ..+.|+||+.||.+|+++|++++++..
T Consensus 134 ----~~~p-------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~ 190 (201)
T TIGR01491 134 ----FIQP-------------------DGIVRVTFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGD 190 (201)
T ss_pred ----eEec-------------------ceeeEEccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECC
Confidence 0000 11223556778777776654 33 348999999999999999999999964
Q ss_pred CC
Q 003049 830 AV 831 (853)
Q Consensus 830 ~~ 831 (853)
+.
T Consensus 191 ~~ 192 (201)
T TIGR01491 191 EG 192 (201)
T ss_pred Cc
Confidence 43
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=6.6e-06 Score=84.57 Aligned_cols=103 Identities=19% Similarity=0.185 Sum_probs=78.9
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCC--CeEEEccCCCCceeEeecCCcccccccchhhhcc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK--PVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEG 750 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~--~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (853)
.++.|++++.++.|+++ +++.++||-....+..+.+++|+..- .....+.
T Consensus 67 ~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~--------------------------- 118 (205)
T PRK13582 67 LDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDE--------------------------- 118 (205)
T ss_pred CCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECC---------------------------
Confidence 35789999999999999 99999999999999999999998521 0000000
Q ss_pred ccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEecc
Q 003049 751 LTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLN 829 (853)
Q Consensus 751 ~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~ 829 (853)
+-.++|. . -..|+.|...++.++..+..++|+|||.||..|.++|++|++.+.
T Consensus 119 -----~~~i~~~------------------~---~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~ 171 (205)
T PRK13582 119 -----DGMITGY------------------D---LRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRP 171 (205)
T ss_pred -----CCeEECc------------------c---ccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECC
Confidence 0001111 0 124778999999999888999999999999999999999998754
|
|
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=98.16 E-value=2.6e-06 Score=70.24 Aligned_cols=52 Identities=19% Similarity=0.208 Sum_probs=45.6
Q ss_pred cCCCCcHHHHHHHHHhcCCcccccCC-ccHHHHHHHHhhchhHHHHHhhhhhhc
Q 003049 162 CTGHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGLWC 214 (853)
Q Consensus 162 ~~GLs~~~~~~~~~~~yG~N~~~~~~-~~~~~l~~~~~~~pf~vf~i~~~~lw~ 214 (853)
..||+++ ++++|+++||+|++..+. ++++.++++++.+|+.++++++.++++
T Consensus 8 ~~GLs~~-~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~ 60 (64)
T smart00831 8 ESGLSSE-EAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSA 60 (64)
T ss_pred ccCCCHH-HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 3599987 999999999999998875 789999999999999988887776654
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.16 E-value=2.5e-05 Score=83.81 Aligned_cols=172 Identities=16% Similarity=0.100 Sum_probs=96.3
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC-----CCeEEEccCCCC--------------------
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT-----KPVLILCPVKNG-------------------- 727 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~-----~~~~il~~~~~~-------------------- 727 (853)
..+-+.++++|++|+++|+++++.||.+...+..+.+++|+.. +...+.+.++..
T Consensus 18 ~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~i~~~~~~ 97 (266)
T PRK10976 18 HTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIFSHNLDRDIASDLFGVVHD 97 (266)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEehhhcCCHHHHHHHHHhhcc
Confidence 3588899999999999999999999999999999999999752 223333211100
Q ss_pred --c-eeEeecCCcccccccchh---hhc------------ccc--CceeEEEeh---hhhHHhhcchhHHhhcc-cceE-
Q 003049 728 --K-VYEWVSPDETEKIQYSEK---EVE------------GLT--DAHDLCIGG---DCFEMLQQTSAVLRVIP-YVKV- 782 (853)
Q Consensus 728 --~-~~~~~~~~~~~~~~~~~~---~~~------------~~~--~~~~l~itG---~~l~~l~~~~~~~~~~~-~~~V- 782 (853)
. .+.+...+.......... ... .+. .-..+.+.. +.++.+. +.+.+.+. ...+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~--~~l~~~~~~~~~~~ 175 (266)
T PRK10976 98 NPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLLPLE--QAINARWGDRVNVS 175 (266)
T ss_pred cCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHHHHH--HHHHHHhCCcEEEE
Confidence 0 000000000000000000 000 000 011122211 1111111 11222111 1221
Q ss_pred -----EEeeChh--hHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEeccCCCcCccccc--ccccccc
Q 003049 783 -----FARVAPE--QKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNS--SSEASKD 846 (853)
Q Consensus 783 -----fAr~sP~--qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~--~~~~~~~ 846 (853)
+-.+.|. .|..-++.|.+ .| ..|+++|||.||.+||+.|+.||||++|.+..++.++ .++..++
T Consensus 176 ~s~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~ 252 (266)
T PRK10976 176 FSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNA 252 (266)
T ss_pred EeCCceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCc
Confidence 2344554 58888887765 44 3489999999999999999999999999998766654 3444443
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.15 E-value=2.6e-05 Score=91.72 Aligned_cols=58 Identities=31% Similarity=0.379 Sum_probs=45.8
Q ss_pred hHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEeccCCCcCccccccccccccc
Q 003049 790 QKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDE 847 (853)
Q Consensus 790 qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~ 847 (853)
.|..-|+.|.+ .| .-|+++|||.||.+||+.|+.||||+||.+..++.++.++..+++
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdE 568 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDE 568 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCc
Confidence 46666666654 34 248999999999999999999999999999877777766665554
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.12 E-value=2.4e-05 Score=82.42 Aligned_cols=174 Identities=18% Similarity=0.222 Sum_probs=97.7
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC-----CCeEEEccCCC--------------------
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT-----KPVLILCPVKN-------------------- 726 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~-----~~~~il~~~~~-------------------- 726 (853)
...+-+.+.++|++|+++|+++++.||.++..+..+.+++++.. ++..+......
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 34577899999999999999999999999999999999999862 12222010000
Q ss_pred --CceeEeecCCccccccc-ch------------------hhhccccCceeEEEeh--hhhHHhhcchhHHhhcccceEE
Q 003049 727 --GKVYEWVSPDETEKIQY-SE------------------KEVEGLTDAHDLCIGG--DCFEMLQQTSAVLRVIPYVKVF 783 (853)
Q Consensus 727 --~~~~~~~~~~~~~~~~~-~~------------------~~~~~~~~~~~l~itG--~~l~~l~~~~~~~~~~~~~~Vf 783 (853)
...+.+...+....... .. ........-..+.+.+ +.+..+. +.+.+.......+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~--~~l~~~~~~~~~~ 170 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLR--EELKKKFPNLIDV 170 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHH--HHHHHHHTTTEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhh--hhhccccCcceeE
Confidence 00011111000000000 00 0000000111122221 1222221 1233333221122
Q ss_pred E-------eeCh--hhHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEeccCCCcCccccccccccccc
Q 003049 784 A-------RVAP--EQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDE 847 (853)
Q Consensus 784 A-------r~sP--~qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~ 847 (853)
. .++| -.|..-++.|.+ .| ..++++||+.||.+||+.|+.|+||+++++..+..++..+...++
T Consensus 171 ~~~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 171 VRSSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNND 247 (254)
T ss_dssp EEEETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTC
T ss_pred EEecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCC
Confidence 2 3334 478888888765 33 468999999999999999999999999999866666555544443
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.06 E-value=5.5e-06 Score=80.87 Aligned_cols=106 Identities=19% Similarity=0.214 Sum_probs=75.9
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCC----eEEEccCCCCceeEeecCCcccccccchhhhc
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKP----VLILCPVKNGKVYEWVSPDETEKIQYSEKEVE 749 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~----~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (853)
.+-|++++.++.|++.|.++.++||--..-+..||.++||...+ .+..+.++.-
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~---------------------- 145 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKY---------------------- 145 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcc----------------------
Confidence 35789999999999999999999999999999999999998432 1111111100
Q ss_pred cccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHc--CCEEEEEcCCcccHHHHHhCCceEEe
Q 003049 750 GLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAV--GRMTLMCGDGTNDVGALKQAHVGVAL 827 (853)
Q Consensus 750 ~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~--g~~v~m~GDG~ND~~ALk~AdVGIAl 827 (853)
.+++... .-....-|..+|..+++. -..++|+|||+||.+|+.-||.=|+.
T Consensus 146 ---------~gfd~~~------------------ptsdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~ 198 (227)
T KOG1615|consen 146 ---------LGFDTNE------------------PTSDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGF 198 (227)
T ss_pred ---------cccccCC------------------ccccCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhcc
Confidence 0000000 001234699999999882 24689999999999999997776666
Q ss_pred c
Q 003049 828 L 828 (853)
Q Consensus 828 ~ 828 (853)
+
T Consensus 199 ~ 199 (227)
T KOG1615|consen 199 G 199 (227)
T ss_pred C
Confidence 4
|
|
| >PF12409 P5-ATPase: P5-type ATPase cation transporter | Back alignment and domain information |
|---|
Probab=98.06 E-value=5.1e-06 Score=77.55 Aligned_cols=61 Identities=18% Similarity=0.190 Sum_probs=50.3
Q ss_pred chhhHHHHHHHHHHHHHhhcccccccceeEEeecCCCcCCCcEEEEEeCCCCCceeEEEeeeecc
Q 003049 50 DAAIVLGGLVAFHILVWLFTAWSVDFKCFAHYSKINDIHLADACKITPVKFCGSKEVVPLQFWKQ 114 (853)
Q Consensus 50 ~~~~~~~~~~~~~~~~~l~~~w~~~~~~~~~~~~~~~~~~a~~~~v~~~~~~~~~~~~~~~~~~~ 114 (853)
..+.+++++++++ +++|++||+|+|+.+++|++| ++++||||+|.. ..|..+++++.....
T Consensus 17 ~~l~~~l~ilT~G-ll~L~~~W~p~~~~~~~~~~c-~l~~A~~vlI~~--~~~~~~i~~v~~~~~ 77 (119)
T PF12409_consen 17 TILYYFLCILTLG-LLYLVFRWFPKWWLKLTFKKC-SLEEADHVLIED--QDGEYEIVKVQKITY 77 (119)
T ss_pred HHHHHHHHHHHHH-HHHHHHhhHHHhheeeeEeEC-CHHHCcEEEEEe--CCCCEEEEEEEEEEC
Confidence 3456677777774 558999999999999999998 699999999985 457889999987544
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.04 E-value=1.3e-05 Score=80.93 Aligned_cols=114 Identities=15% Similarity=0.061 Sum_probs=76.7
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
.++++++.+.++.|++.|+++.++|+.+...+..+.+..|+...-..++.... .+.. ++
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~-----~~~~-~g--------------- 129 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPA-----SFDN-DG--------------- 129 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCc-----eECC-CC---------------
Confidence 58999999999999999999999999999999999999998532111111100 0000 00
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEe-eChhhHHHHHHHHHHc-CCEEEEEcCCcccHHHHHhCCceEE
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFAR-VAPEQKELILTTFKAV-GRMTLMCGDGTNDVGALKQAHVGVA 826 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr-~sP~qK~~iV~~Lq~~-g~~v~m~GDG~ND~~ALk~AdVGIA 826 (853)
.+++. -.++.++.. .....|..+++.+++. ...+.|+|||.||..|.++||+=.|
T Consensus 130 -----~~~~~--------------~~~~~~~~~~~~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 130 -----RHIVW--------------PHHCHGCCSCPCGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred -----cEEEe--------------cCCCCccCcCCCCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 00000 000111111 1223589999999887 8889999999999999999987543
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=7.5e-05 Score=80.29 Aligned_cols=41 Identities=12% Similarity=0.209 Sum_probs=38.5
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.+-+.++++|++|++.|+++++.||.+...+..+++++++.
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALD 60 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence 47889999999999999999999999999999999999875
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.00 E-value=7.9e-05 Score=79.53 Aligned_cols=40 Identities=13% Similarity=0.135 Sum_probs=36.9
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 675 lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.-+.++++|++|++.|++++++||..+..+..+.+++|+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4456999999999999999999999999999999999974
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.00 E-value=1.3e-05 Score=80.28 Aligned_cols=99 Identities=22% Similarity=0.224 Sum_probs=70.6
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCC--CeEEEccCCCCceeEeecCCcccccccchhhhccc
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK--PVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGL 751 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~--~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (853)
+++|++.+.++.+++.|++++++||.+...+..+++.+|+..- ..+..+ ++
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~--~~------------------------- 125 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFD--DN------------------------- 125 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEEC--CC-------------------------
Confidence 3689999999999999999999999999999999999998521 000000 00
Q ss_pred cCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHc----CCEEEEEcCCcccHHHHHhC
Q 003049 752 TDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAV----GRMTLMCGDGTNDVGALKQA 821 (853)
Q Consensus 752 ~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~----g~~v~m~GDG~ND~~ALk~A 821 (853)
. .++|.... . ....+..|..+++.+++. ...+.|+|||.||.+|++.|
T Consensus 126 ---g--~~~g~~~~---------------~--~~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 126 ---G--LLTGPIEG---------------Q--VNPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred ---C--EEeCccCC---------------c--ccCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 0 12221000 0 124567899999887653 24589999999999999876
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00011 Score=79.39 Aligned_cols=43 Identities=14% Similarity=0.069 Sum_probs=39.2
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.+.+.++++++|++|++.|++++++||.....+..+++++|+.
T Consensus 19 ~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 19 HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 3456778999999999999999999999999999999999986
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=2.3e-05 Score=79.18 Aligned_cols=85 Identities=18% Similarity=0.234 Sum_probs=65.8
Q ss_pred HHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEe
Q 003049 681 KILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIG 760 (853)
Q Consensus 681 ~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~it 760 (853)
.+|+.|++.|+++.++||.+...+..+++++|+..
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~--------------------------------------------- 89 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH--------------------------------------------- 89 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------------------------
Confidence 69999999999999999999999999999999851
Q ss_pred hhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHH-HHHcC---CEEEEEcCCcccHHHHHhCCceEEeccCCCc
Q 003049 761 GDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTT-FKAVG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPP 833 (853)
Q Consensus 761 G~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~-Lq~~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~ 833 (853)
+|. ..+.|...++. +++.| ..++|+||+.||.+|++.|.++++++++.+.
T Consensus 90 ---------------------~f~--g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~ 143 (183)
T PRK09484 90 ---------------------LYQ--GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPL 143 (183)
T ss_pred ---------------------eec--CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHH
Confidence 121 11234444433 34444 3599999999999999999999998765543
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.93 E-value=3.2e-05 Score=80.50 Aligned_cols=108 Identities=15% Similarity=0.139 Sum_probs=73.7
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
+++|++.+.++.|++.|+++.++||-+...+..+.+.+ +......-.+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~------------------------------- 121 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNG------------------------------- 121 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeE-------------------------------
Confidence 68999999999999999999999999999999999988 6431111000
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEE---EeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEE
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVF---ARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVA 826 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~Vf---Ar~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIA 826 (853)
..++|+.+..-.. +-... .++ ...|..+++.++.....+.|+|||.||..|.++||+.++
T Consensus 122 ---~~~~~~~~~~~kp---------~p~~~~~~~~~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 122 ---SDFSGEYITITWP---------HPCDEHCQNHC-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred ---EEecCCeeEEecc---------CCccccccccC-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 0111111000000 00000 001 123788888888777789999999999999999999777
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=97.90 E-value=5.1e-05 Score=79.14 Aligned_cols=41 Identities=15% Similarity=0.251 Sum_probs=39.1
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
+++|++.++++.|++.|+++.++||.....+..+++.+|+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence 47899999999999999999999999999999999999996
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.85 E-value=5.3e-05 Score=77.65 Aligned_cols=109 Identities=12% Similarity=0.071 Sum_probs=77.5
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccc
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGL 751 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (853)
..++++++.+.|+.+++.|++++++||-....+..+++.+|+..- +.. .+..
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~----~~~-----~l~~------------------- 136 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNA----IGT-----RLEE------------------- 136 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcce----Eec-----ceEE-------------------
Confidence 457899999999999999999999999999999999999998521 000 0000
Q ss_pred cCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHH-HcCC---EEEEEcCCcccHHHHHhCCceEEe
Q 003049 752 TDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFK-AVGR---MTLMCGDGTNDVGALKQAHVGVAL 827 (853)
Q Consensus 752 ~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq-~~g~---~v~m~GDG~ND~~ALk~AdVGIAl 827 (853)
..+-..+|+... -.+.++.|...++.+. +.|. .+.++||+.||.++++.|+.++++
T Consensus 137 --~~~g~~~g~~~~------------------~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v 196 (202)
T TIGR01490 137 --SEDGIYTGNIDG------------------NNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVV 196 (202)
T ss_pred --cCCCEEeCCccC------------------CCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEe
Confidence 000012222100 1234677888777654 3453 578999999999999999999988
Q ss_pred c
Q 003049 828 L 828 (853)
Q Consensus 828 ~ 828 (853)
.
T Consensus 197 ~ 197 (202)
T TIGR01490 197 N 197 (202)
T ss_pred C
Confidence 5
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00024 Score=75.79 Aligned_cols=42 Identities=12% Similarity=0.201 Sum_probs=38.9
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.++-+++.++|++|++.|++++++||.+...+..+.+++|+.
T Consensus 15 ~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 15 HTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD 56 (256)
T ss_pred CccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 357889999999999999999999999999999999999875
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00048 Score=74.20 Aligned_cols=41 Identities=10% Similarity=0.088 Sum_probs=37.6
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.+-+.++++|++|++.||++++.||.....+..+++++|+.
T Consensus 24 ~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 24 YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 34567999999999999999999999999999999999984
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00018 Score=67.62 Aligned_cols=118 Identities=18% Similarity=0.110 Sum_probs=79.0
Q ss_pred eecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhc
Q 003049 670 VFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVE 749 (853)
Q Consensus 670 ~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (853)
....++.+++.+.+++|++.|++++++||.+...+..+.+++|+......++....... ..+.
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~---------------- 82 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAI-YYPK---------------- 82 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhh-hccc----------------
Confidence 34458899999999999999999999999999999999999998422111111100000 0000
Q ss_pred cccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHh-CCceEE
Q 003049 750 GLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQ-AHVGVA 826 (853)
Q Consensus 750 ~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~-AdVGIA 826 (853)
...........+.+-.|+.+..+.+.+......++|+||+.||+.|++. +.-+|+
T Consensus 83 ----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 83 ----------------------EGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred ----------------------ccccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 0000011123455667777777777776666779999999999999998 555554
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00048 Score=71.99 Aligned_cols=43 Identities=12% Similarity=0.130 Sum_probs=38.8
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.+..-++++++|++|++.|++++++||..+..+..+++++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4455667999999999999999999999999999999999984
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00054 Score=71.32 Aligned_cols=101 Identities=21% Similarity=0.251 Sum_probs=71.9
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
.++.|++.+.++.|++.|+++.++||.....+..+.+..|+...-
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f----------------------------------- 136 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF----------------------------------- 136 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc-----------------------------------
Confidence 568999999999999999999999999999999999999985321
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEeeCh--hhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCc-eEEecc
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAP--EQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHV-GVALLN 829 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP--~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdV-GIAl~~ 829 (853)
+.+++++. +.+..| +--..+++.++.....++|+||+.||+.|.++|++ +|.+..
T Consensus 137 ---~~~~~~~~-------------------~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~ 194 (226)
T PRK13222 137 ---SVVIGGDS-------------------LPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTY 194 (226)
T ss_pred ---cEEEcCCC-------------------CCCCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECc
Confidence 11111110 111223 22234444444444669999999999999999998 666654
Q ss_pred C
Q 003049 830 A 830 (853)
Q Consensus 830 ~ 830 (853)
|
T Consensus 195 g 195 (226)
T PRK13222 195 G 195 (226)
T ss_pred C
Confidence 3
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0019 Score=67.14 Aligned_cols=39 Identities=15% Similarity=0.245 Sum_probs=36.0
Q ss_pred CcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 676 REDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 676 r~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
-+.++++|++|++.|++++++||..+..+..+++++|+.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 344899999999999999999999999999999999975
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00029 Score=66.97 Aligned_cols=94 Identities=17% Similarity=0.183 Sum_probs=72.4
Q ss_pred HHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEe
Q 003049 681 KILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIG 760 (853)
Q Consensus 681 ~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~it 760 (853)
..|+.|.++|+++.+|||.+......=|+++||..
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~--------------------------------------------- 76 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH--------------------------------------------- 76 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------------------------
Confidence 47899999999999999999999999999999961
Q ss_pred hhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEeccCCCcCcc
Q 003049 761 GDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQS 836 (853)
Q Consensus 761 G~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~ 836 (853)
+| .--++|....+.|.+ .+ .-|+++||-.||-|+|++...++|..++-+....
T Consensus 77 ---------------------~~--qG~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~ 133 (170)
T COG1778 77 ---------------------LY--QGISDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQ 133 (170)
T ss_pred ---------------------ee--echHhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHH
Confidence 22 123456666665554 33 3489999999999999999888888888776444
Q ss_pred cccccc
Q 003049 837 GNSSSE 842 (853)
Q Consensus 837 ~~~~~~ 842 (853)
..+..+
T Consensus 134 ~a~~Vt 139 (170)
T COG1778 134 RADYVT 139 (170)
T ss_pred hhHhhh
Confidence 444433
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00092 Score=69.64 Aligned_cols=104 Identities=24% Similarity=0.269 Sum_probs=75.7
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccc
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGL 751 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (853)
..++=|++++++..|+++|++..++|+++...+..+.+..|+..--..+.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~------------------------------ 136 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIV------------------------------ 136 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEE------------------------------
Confidence 55788999999999999999999999999999999999999974311111
Q ss_pred cCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCC---ceEEec
Q 003049 752 TDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAH---VGVALL 828 (853)
Q Consensus 752 ~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~Ad---VGIAl~ 828 (853)
+|+.. -...=.|.....+++.+......++|+||..+|.-|=|+|+ ||+..+
T Consensus 137 --------g~~~~-----------------~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g 191 (220)
T COG0546 137 --------GGDDV-----------------PPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWG 191 (220)
T ss_pred --------cCCCC-----------------CCCCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECC
Confidence 11100 01112455555555555544346999999999999999998 667666
Q ss_pred cC
Q 003049 829 NA 830 (853)
Q Consensus 829 ~~ 830 (853)
.+
T Consensus 192 ~~ 193 (220)
T COG0546 192 YN 193 (220)
T ss_pred CC
Confidence 43
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.002 Score=75.99 Aligned_cols=40 Identities=13% Similarity=0.058 Sum_probs=36.6
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 675 lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.-+.++++|++|+++|+.+++.||.....+..+++++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 4457899999999999999999999999999999999974
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.00061 Score=72.39 Aligned_cols=162 Identities=16% Similarity=0.179 Sum_probs=92.3
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCc--------eeEeecCCc-----c
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGK--------VYEWVSPDE-----T 738 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~--------~~~~~~~~~-----~ 738 (853)
..+..|...++|+++++.|+.++.+||........+.+++++..++..|. .++... ...|...-+ .
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~-~NGa~I~~~~~~~~~~~~~~~~~~~~~~~ 97 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVT-SVGSEIYYGGAEVPDQHWAEYLSEKWQRD 97 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEE-cCCceEEeCCCCcCCHHHHHHHhcccCHH
Confidence 34567899999999999999999999999999999999999875443332 221100 011100000 0
Q ss_pred cc----cccchhhhc--cccCceeEEEeh--hhhHHhhcchhHHhhcc----cceE-EE-----eeCh--hhHHHHHHHH
Q 003049 739 EK----IQYSEKEVE--GLTDAHDLCIGG--DCFEMLQQTSAVLRVIP----YVKV-FA-----RVAP--EQKELILTTF 798 (853)
Q Consensus 739 ~~----~~~~~~~~~--~~~~~~~l~itG--~~l~~l~~~~~~~~~~~----~~~V-fA-----r~sP--~qK~~iV~~L 798 (853)
.. ..+...... .....+.+.+-. +....+. ..+.+.+. .+.+ ++ ...| ..|..-++.|
T Consensus 98 ~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~--~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l 175 (249)
T TIGR01485 98 IVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVI--KQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYL 175 (249)
T ss_pred HHHHHHhcCcccccCCccccCCeeEEEEechhhhhHHH--HHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHH
Confidence 00 000000000 011123333322 1211111 11122111 1222 11 3344 4788888888
Q ss_pred HH-cC---CEEEEEcCCcccHHHHHh-CCceEEeccCCCcCcc
Q 003049 799 KA-VG---RMTLMCGDGTNDVGALKQ-AHVGVALLNAVPPTQS 836 (853)
Q Consensus 799 q~-~g---~~v~m~GDG~ND~~ALk~-AdVGIAl~~~~~~~~~ 836 (853)
.+ .| ..|+++||+.||.+||+. +..||+|+++.+..++
T Consensus 176 ~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~ 218 (249)
T TIGR01485 176 LQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQ 218 (249)
T ss_pred HHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHH
Confidence 65 33 468999999999999998 6799999999887543
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.00071 Score=71.25 Aligned_cols=54 Identities=30% Similarity=0.334 Sum_probs=43.7
Q ss_pred eChh--hHHHHHHHHHH-cCC---EEEEEcCCcccHHHHHhCCceEEeccCCCcCccccc
Q 003049 786 VAPE--QKELILTTFKA-VGR---MTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNS 839 (853)
Q Consensus 786 ~sP~--qK~~iV~~Lq~-~g~---~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~ 839 (853)
..|. .|...++.|.+ .|. .++++||+.||.+||+.|+.||+|+++.+..++.++
T Consensus 153 i~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~ 212 (236)
T TIGR02471 153 VLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRH 212 (236)
T ss_pred EeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhc
Confidence 4453 78888888865 442 488999999999999999999999999888655544
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0016 Score=75.26 Aligned_cols=98 Identities=14% Similarity=0.140 Sum_probs=73.4
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
|++|++.+.|+++++.|++++++|+-+...+..+++.+|+.+. ++.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~---Vig------------------------------- 117 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG---VFA------------------------------- 117 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE---EEe-------------------------------
Confidence 5789999999999999999999999999999999999998421 111
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCC
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVP 832 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~ 832 (853)
++. ..+..|+.|...+......+ ...|+||..||.++++.|+-.++++.+..
T Consensus 118 -------sd~-------------------~~~~kg~~K~~~l~~~l~~~-~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~ 169 (479)
T PRK08238 118 -------SDG-------------------TTNLKGAAKAAALVEAFGER-GFDYAGNSAADLPVWAAARRAIVVGASPG 169 (479)
T ss_pred -------CCC-------------------ccccCCchHHHHHHHHhCcc-CeeEecCCHHHHHHHHhCCCeEEECCCHH
Confidence 100 01356677766554322222 15789999999999999999999975443
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0055 Score=69.90 Aligned_cols=156 Identities=21% Similarity=0.189 Sum_probs=89.8
Q ss_pred chHHHH-HHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCC--------ceeEeecCCcc----c-----
Q 003049 678 DSAKIL-SELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNG--------KVYEWVSPDET----E----- 739 (853)
Q Consensus 678 ~a~~~I-~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~--------~~~~~~~~~~~----~----- 739 (853)
....++ +++++.|+..+..||..+..+..+.++.++..+...|.. ++.. ....|...-+. .
T Consensus 32 ~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~-nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~ 110 (413)
T PLN02382 32 LRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMS-VGTEIAYGESMVPDHGWVEYLNKKWDREIVVEE 110 (413)
T ss_pred HHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEc-CCcEEEeCCCCccChhHHHHHhccCChhhHHHH
Confidence 345555 889999999999999999999999999998866544432 2110 01111110000 0
Q ss_pred ccccch--hhhccccCceeEEEehh--hhHHhhcchhHHhhcc----cce------EEEeeChh--hHHHHHHHHHHc--
Q 003049 740 KIQYSE--KEVEGLTDAHDLCIGGD--CFEMLQQTSAVLRVIP----YVK------VFARVAPE--QKELILTTFKAV-- 801 (853)
Q Consensus 740 ~~~~~~--~~~~~~~~~~~l~itG~--~l~~l~~~~~~~~~~~----~~~------VfAr~sP~--qK~~iV~~Lq~~-- 801 (853)
...++. .........+.+.+-.+ ....+. +.+.+.+. ++. -+-.+.|. .|..-++.|.+.
T Consensus 111 ~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~--~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~ 188 (413)
T PLN02382 111 TSKFPELKLQPETEQRPHKVSFYVDKKKAQEVI--KELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLK 188 (413)
T ss_pred HhcCCCcccCCcccCCCeEEEEEechHHhHHHH--HHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhh
Confidence 000000 00000012233333322 222221 12222221 122 13456665 499888888664
Q ss_pred --C---CEEEEEcCCcccHHHHHhCC-ceEEeccCCCcCcc
Q 003049 802 --G---RMTLMCGDGTNDVGALKQAH-VGVALLNAVPPTQS 836 (853)
Q Consensus 802 --g---~~v~m~GDG~ND~~ALk~Ad-VGIAl~~~~~~~~~ 836 (853)
| ..|+.+||+.||.+||+.|+ .||||+|+.+..++
T Consensus 189 ~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~ 229 (413)
T PLN02382 189 AEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQ 229 (413)
T ss_pred hcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHH
Confidence 4 36899999999999999999 69999999987654
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0032 Score=64.64 Aligned_cols=42 Identities=17% Similarity=0.251 Sum_probs=38.9
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.++.|++.++++.|++.|+++.++||.+...+..+-+..|+.
T Consensus 74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 74 VEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred cccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh
Confidence 478899999999999999999999999999999989999885
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0061 Score=65.44 Aligned_cols=157 Identities=13% Similarity=0.109 Sum_probs=85.1
Q ss_pred CCCcchHHHHHHHhh-CCCcEEEEcCCChhhHHHHHHHcCcC---CCCeEEEccCCCCceeEeecCCcccccccch---h
Q 003049 674 PIREDSAKILSELKN-SSQDLAMITGDQALTACYVASQVHIV---TKPVLILCPVKNGKVYEWVSPDETEKIQYSE---K 746 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~-agi~v~miTGDn~~TA~~VA~~~gI~---~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~---~ 746 (853)
.+-++++++|+.|++ .|+.++++||.....+..+.+.+++. .+...+.+..+ .+.+...+......+-. .
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~---~~~~~~l~~~~~~~i~~~l~~ 112 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDING---KTHIVHLPDAIARDISVQLHT 112 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCC---CeeeccCChhHHHHHHHHHHH
Confidence 455789999999998 79999999999999999888877642 11222221110 11111111110000000 0
Q ss_pred hh------ccccCceeEEEehhhh----HHhhc-chhHHhhcc-----cceEEEeeChh--hHHHHHHHHHH-cC---CE
Q 003049 747 EV------EGLTDAHDLCIGGDCF----EMLQQ-TSAVLRVIP-----YVKVFARVAPE--QKELILTTFKA-VG---RM 804 (853)
Q Consensus 747 ~~------~~~~~~~~l~itG~~l----~~l~~-~~~~~~~~~-----~~~VfAr~sP~--qK~~iV~~Lq~-~g---~~ 804 (853)
.. .-..+...++...... +.+.. ...+.+... ...-+-.+.|. .|..-|+.+.+ .| ..
T Consensus 113 ~~~~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~ 192 (266)
T PRK10187 113 ALAQLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRT 192 (266)
T ss_pred HhccCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCe
Confidence 00 0001112223222111 00000 011111111 11233344554 89888887654 43 56
Q ss_pred EEEEcCCcccHHHHHhC----CceEEeccCCCc
Q 003049 805 TLMCGDGTNDVGALKQA----HVGVALLNAVPP 833 (853)
Q Consensus 805 v~m~GDG~ND~~ALk~A----dVGIAl~~~~~~ 833 (853)
++++||+.||.+|++.+ ..||+|+++.+.
T Consensus 193 v~~~GD~~nD~~mf~~~~~~~g~~vavg~a~~~ 225 (266)
T PRK10187 193 PVFVGDDLTDEAGFAVVNRLGGISVKVGTGATQ 225 (266)
T ss_pred EEEEcCCccHHHHHHHHHhcCCeEEEECCCCCc
Confidence 88999999999999999 999999987654
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.01 Score=63.46 Aligned_cols=43 Identities=12% Similarity=0.060 Sum_probs=38.8
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~ 715 (853)
+..-+.++++|++|++.||.+++.||-.......+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3456779999999999999999999999999999999999853
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0048 Score=66.50 Aligned_cols=42 Identities=19% Similarity=0.173 Sum_probs=38.5
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.++.|++.++++.|++.|+++.++||-+...+..+.++.|+.
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~ 141 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIG 141 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcH
Confidence 478999999999999999999999999999899898888875
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.024 Score=58.02 Aligned_cols=39 Identities=13% Similarity=0.260 Sum_probs=35.7
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVH 712 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~g 712 (853)
++-+++.++|++|++.|++++++||.....+..+.++++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477899999999999999999999999999999998854
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0044 Score=63.21 Aligned_cols=43 Identities=16% Similarity=0.182 Sum_probs=38.8
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.+++.+.+.++++.|++.|+++.++||-....+..+.+.+|+.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 3456777899999999999999999999999999999999986
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0062 Score=62.73 Aligned_cols=42 Identities=12% Similarity=0.137 Sum_probs=39.1
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
-++.|++.++++.|++.|+++.++|+-+...+..+.+..|+.
T Consensus 84 ~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 125 (213)
T TIGR01449 84 TSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA 125 (213)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH
Confidence 368999999999999999999999999999999999999986
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0063 Score=63.36 Aligned_cols=98 Identities=14% Similarity=0.122 Sum_probs=70.4
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
.++.|++.++++.|++.|+++.++||........+.+..||..--
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f----------------------------------- 135 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF----------------------------------- 135 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc-----------------------------------
Confidence 578899999999999999999999999999999999999986321
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcC---CEEEEEcCCcccHHHHHhCCceEEec
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVG---RMTLMCGDGTNDVGALKQAHVGVALL 828 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g---~~v~m~GDG~ND~~ALk~AdVGIAl~ 828 (853)
+..++++.. ....|+- .-+...+++.| ..++|+||..||+.|-+.|++.....
T Consensus 136 ---~~~~~~~~~-------------------~~~Kp~~-~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v 191 (222)
T PRK10826 136 ---DALASAEKL-------------------PYSKPHP-EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVV 191 (222)
T ss_pred ---cEEEEcccC-------------------CCCCCCH-HHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEe
Confidence 111111100 0112222 13444555555 34899999999999999999876554
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0095 Score=61.59 Aligned_cols=42 Identities=17% Similarity=0.052 Sum_probs=38.7
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~ 715 (853)
++.|++.++++.|++.|+++.++||.....+..+-+..|+..
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~ 123 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDE 123 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh
Confidence 478999999999999999999999999999999999999863
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.0092 Score=62.52 Aligned_cols=42 Identities=12% Similarity=0.130 Sum_probs=37.8
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
-++.|++.+.++.|++.|+++.++|+.+...+..+-+..|+.
T Consensus 94 ~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~ 135 (229)
T PRK13226 94 SQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWE 135 (229)
T ss_pred CeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCch
Confidence 367999999999999999999999999998888888888875
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.011 Score=62.07 Aligned_cols=42 Identities=17% Similarity=0.218 Sum_probs=37.1
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCC----ChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGD----QALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGD----n~~TA~~VA~~~gI~ 714 (853)
..+.+++++.+++|++.|+++.++||. ...|+..+.+..||.
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip 158 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIP 158 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCC
Confidence 457888999999999999999999995 466999999999994
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.019 Score=61.26 Aligned_cols=45 Identities=9% Similarity=0.095 Sum_probs=41.4
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKP 717 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~ 717 (853)
-++||++.+.++.|++.|+++.++||-....+..+.++.|+....
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~ 164 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPN 164 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcC
Confidence 578999999999999999999999999999999999999986443
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.022 Score=58.78 Aligned_cols=105 Identities=19% Similarity=0.053 Sum_probs=72.5
Q ss_pred CCCcchHHHHH-HHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 674 PIREDSAKILS-ELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 674 ~lr~~a~~~I~-~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
.++|++.+.|+ .+++.|++++++|+=....+..+|+..++......+-+. ++-
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i~t~------le~-------------------- 147 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLNLIASQ------IER-------------------- 147 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCcEEEEE------eEE--------------------
Confidence 46999999996 889999999999999999999999997765321111100 000
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEE-EeeChhhHHHHHHHHHH-cCCEEEEEcCCcccHHHHHhCCceEEec
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVF-ARVAPEQKELILTTFKA-VGRMTLMCGDGTNDVGALKQAHVGVALL 828 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~Vf-Ar~sP~qK~~iV~~Lq~-~g~~v~m~GDG~ND~~ALk~AdVGIAl~ 828 (853)
-.| .++- ..+.-++|..-++..-. .....-+=||..||.|+|+.||-.+++.
T Consensus 148 ------~~g------------------g~~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 148 ------GNG------------------GWVLPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred ------eCC------------------ceEcCccCCChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 000 0110 12566788887764422 2233457799999999999999999984
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.044 Score=56.66 Aligned_cols=105 Identities=19% Similarity=0.054 Sum_probs=73.2
Q ss_pred CCCcchHHHH-HHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 674 PIREDSAKIL-SELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 674 ~lr~~a~~~I-~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
++.|++.+.| +.|++.|++++++|+-....+..+++.+|+.....++-+.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i~t~----------------------------- 145 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLIASQ----------------------------- 145 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceEEEE-----------------------------
Confidence 4589999999 5788899999999999999999999999973211111000
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEE-EeeChhhHHHHHHHH-HHcCCEEEEEcCCcccHHHHHhCCceEEec
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVF-ARVAPEQKELILTTF-KAVGRMTLMCGDGTNDVGALKQAHVGVALL 828 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~Vf-Ar~sP~qK~~iV~~L-q~~g~~v~m~GDG~ND~~ALk~AdVGIAl~ 828 (853)
-....||. +. ..+.-++|..-++.. .......-+=||..||.|+|+.|+-.+++.
T Consensus 146 --l~~~~tg~-------------------~~g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 146 --MQRRYGGW-------------------VLTLRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred --EEEEEccE-------------------ECCccCCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 01122232 11 126678888877654 222233446799999999999999999985
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.016 Score=60.83 Aligned_cols=41 Identities=15% Similarity=0.248 Sum_probs=36.0
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCC----ChhhHHHHHHHcCcCC
Q 003049 675 IREDSAKILSELKNSSQDLAMITGD----QALTACYVASQVHIVT 715 (853)
Q Consensus 675 lr~~a~~~I~~L~~agi~v~miTGD----n~~TA~~VA~~~gI~~ 715 (853)
+++.+++.+++|++.|+++.++|+- ...++..+.+.+||..
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~ 159 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPA 159 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCch
Confidence 4455999999999999999999997 6679999999999963
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.025 Score=60.96 Aligned_cols=41 Identities=12% Similarity=0.166 Sum_probs=38.8
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
++-|++.++++.|++.|+++.++|+.+...+..+-+..|+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~ 182 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLR 182 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57899999999999999999999999999999999999986
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.025 Score=55.36 Aligned_cols=110 Identities=14% Similarity=0.154 Sum_probs=68.2
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
.++|+-++.++-+++.+++++++|+--.--...+-..++=-. ...-.+...+.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke-~i~~idi~sn~-------------------------- 125 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKE-RIYCIDIVSNN-------------------------- 125 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhcccc-ceeeeEEeecC--------------------------
Confidence 579999999999999999999998766555555555443100 00000000000
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcc-cceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEE
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIP-YVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVA 826 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~-~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIA 826 (853)
..+-..|. ..++. .-..| -.+|...|..|++....+.|||||+.|..|-|.+|+=.|
T Consensus 126 -~~ih~dg~-----------h~i~~~~ds~f----G~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 126 -DYIHIDGQ-----------HSIKYTDDSQF----GHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred -ceEcCCCc-----------eeeecCCcccc----CCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 00000000 00000 00122 247899999999999999999999999999999987554
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.038 Score=58.63 Aligned_cols=46 Identities=20% Similarity=0.217 Sum_probs=39.6
Q ss_pred hhHHHHHHHHHHcCCEEEEEcC----CcccHHHHHhC-CceEEeccCCCcC
Q 003049 789 EQKELILTTFKAVGRMTLMCGD----GTNDVGALKQA-HVGVALLNAVPPT 834 (853)
Q Consensus 789 ~qK~~iV~~Lq~~g~~v~m~GD----G~ND~~ALk~A-dVGIAl~~~~~~~ 834 (853)
-.|..-|+.|.+.-.-|+.+|| |-||.+||+.| -.|+++.++++..
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~ 237 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTI 237 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHH
Confidence 4799999999887778999999 99999999987 7889988777653
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.029 Score=59.56 Aligned_cols=42 Identities=12% Similarity=0.014 Sum_probs=39.0
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~ 715 (853)
++.|++.++++.|++.|+++.++|+-+...+..+-+..||..
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~ 149 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSD 149 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChh
Confidence 578999999999999999999999999999999999999863
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.035 Score=56.58 Aligned_cols=41 Identities=17% Similarity=0.186 Sum_probs=37.7
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
++.|++.+++++|++.|+++.++|+-+...+..+.+.+|+.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~ 132 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD 132 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh
Confidence 67899999999999999999999999888888888899975
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.04 Score=58.57 Aligned_cols=94 Identities=16% Similarity=0.125 Sum_probs=67.7
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
++.|++.++++.|++.|+++.++||.....+..+-++.|+..--
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f------------------------------------ 142 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYR------------------------------------ 142 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCC------------------------------------
Confidence 56899999999999999999999999999999999999886320
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCC----EEEEEcCCcccHHHHHhCCce
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGR----MTLMCGDGTNDVGALKQAHVG 824 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~----~v~m~GDG~ND~~ALk~AdVG 824 (853)
.+.+++++. + .+..| +...+...+++.|. .++|+||..+|+-|-+.|.+-
T Consensus 143 -~d~ii~~~~------------------~-~~~KP-~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 143 -PDYNVTTDD------------------V-PAGRP-APWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred -CceEEcccc------------------C-CCCCC-CHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 011122211 1 11234 23445555666553 389999999999999999963
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.046 Score=59.66 Aligned_cols=109 Identities=12% Similarity=-0.024 Sum_probs=75.4
Q ss_pred eecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhc
Q 003049 670 VFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVE 749 (853)
Q Consensus 670 ~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (853)
...+++.+++.++|++|++.|++++++||....++..+.+.+|+..... +
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f---~--------------------------- 232 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWF---D--------------------------- 232 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCch---h---------------------------
Confidence 3678899999999999999999999999999999999999998863100 0
Q ss_pred cccCceeEEEehhhhH-HhhcchhHHhhcccceEEEeeChhhHHHHHHHHHH-cCCEEEEEcCCcccHHHHHhCCceEE
Q 003049 750 GLTDAHDLCIGGDCFE-MLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKA-VGRMTLMCGDGTNDVGALKQAHVGVA 826 (853)
Q Consensus 750 ~~~~~~~l~itG~~l~-~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~-~g~~v~m~GDG~ND~~ALk~AdVGIA 826 (853)
..+..+... +|.+ .. --+-.|+-+...++.+-. .-..++|+||..+|+-|-+.|.+-.-
T Consensus 233 -------~i~~~~~~~~~~~~----------~~-~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i 293 (300)
T PHA02530 233 -------DLIGRPPDMHFQRE----------QG-DKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECW 293 (300)
T ss_pred -------hhhCCcchhhhccc----------CC-CCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEE
Confidence 000000000 0000 00 014456677777776533 22568999999999999999998643
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.061 Score=66.24 Aligned_cols=187 Identities=19% Similarity=0.212 Sum_probs=99.9
Q ss_pred hHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEee--ecCCCCcchHHHHHHHhh-CCCcEEEE
Q 003049 620 SYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAV--FNCPIREDSAKILSELKN-SSQDLAMI 696 (853)
Q Consensus 620 ~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~--~~d~lr~~a~~~I~~L~~-agi~v~mi 696 (853)
+.+.....|.+.-.|.+++-| |.|++.... -...+-+++.++|++|.+ .|+.|+++
T Consensus 479 ~~~~~~~~y~~~~~rLi~~D~---------------------DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~iv 537 (726)
T PRK14501 479 AAEEIIARYRAASRRLLLLDY---------------------DGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAII 537 (726)
T ss_pred CHHHHHHHHHhccceEEEEec---------------------CccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEE
Confidence 455666777777778888865 445554311 112356799999999999 69999999
Q ss_pred cCCChhhHHHHHHHcCcC---CCCeEEEccCCCCceeEeecCCc-cc--ccccch--hh-hc----cc--cCceeEEEe-
Q 003049 697 TGDQALTACYVASQVHIV---TKPVLILCPVKNGKVYEWVSPDE-TE--KIQYSE--KE-VE----GL--TDAHDLCIG- 760 (853)
Q Consensus 697 TGDn~~TA~~VA~~~gI~---~~~~~il~~~~~~~~~~~~~~~~-~~--~~~~~~--~~-~~----~~--~~~~~l~it- 760 (853)
||.............++. .+...+... +-.|..... .. .-.... .. .. .. .+...+...
T Consensus 538 SGR~~~~l~~~~~~~~l~liaenG~~i~~~-----~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~ 612 (726)
T PRK14501 538 SGRDRDTLERWFGDLPIHLVAEHGAWSRAP-----GGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHY 612 (726)
T ss_pred eCCCHHHHHHHhCCCCeEEEEeCCEEEeCC-----CCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEc
Confidence 999999888776655431 112222110 112322111 00 000000 00 00 00 011122221
Q ss_pred -h--hhhHHhhcc---hhHHhhcc--cceEE-----EeeCh--hhHHHHHHHHHHcC--CEEEEEcCCcccHHHHHhC--
Q 003049 761 -G--DCFEMLQQT---SAVLRVIP--YVKVF-----ARVAP--EQKELILTTFKAVG--RMTLMCGDGTNDVGALKQA-- 821 (853)
Q Consensus 761 -G--~~l~~l~~~---~~~~~~~~--~~~Vf-----Ar~sP--~qK~~iV~~Lq~~g--~~v~m~GDG~ND~~ALk~A-- 821 (853)
. ..+...... ..+...+. .+.+. -.+.| -.|...++.+.+.. ..++++||+.||.+|++.+
T Consensus 613 r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~ 692 (726)
T PRK14501 613 RNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPE 692 (726)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhccc
Confidence 0 111111100 11222221 11221 13334 57999999988732 4699999999999999997
Q ss_pred -CceEEeccCCC
Q 003049 822 -HVGVALLNAVP 832 (853)
Q Consensus 822 -dVGIAl~~~~~ 832 (853)
..||+|+++.+
T Consensus 693 ~~~~v~vG~~~s 704 (726)
T PRK14501 693 TAITVKVGPGES 704 (726)
T ss_pred CceEEEECCCCC
Confidence 58888887544
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.044 Score=56.77 Aligned_cols=42 Identities=17% Similarity=0.100 Sum_probs=39.4
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.++.||+.+.++.|++.|+++.++||-....+..+.+..|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 478999999999999999999999999999999999999875
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.026 Score=56.65 Aligned_cols=40 Identities=15% Similarity=0.300 Sum_probs=32.2
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.++.|++.++|+.|+++|+++.++|+... +..+.+.+|+.
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~ 125 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLI 125 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcH
Confidence 46789999999999999999999997432 45567777764
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.09 Score=54.52 Aligned_cols=98 Identities=14% Similarity=0.146 Sum_probs=65.3
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
++.|++.++++.|++.|+++.++|+.+...+...-+..|+...
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~------------------------------------- 125 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP------------------------------------- 125 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc-------------------------------------
Confidence 5789999999999999999999999887666655556665211
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcC---CEEEEEcCCcccHHHHHhCCce-EEecc
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVG---RMTLMCGDGTNDVGALKQAHVG-VALLN 829 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g---~~v~m~GDG~ND~~ALk~AdVG-IAl~~ 829 (853)
+.+++++.. .+..|+ -.-+...+++.| ..++|+||..+|+.|-++|++- |++..
T Consensus 126 --~~i~~~~~~-------------------~~~KP~-p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~ 183 (218)
T PRK11587 126 --EVFVTAERV-------------------KRGKPE-PDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNA 183 (218)
T ss_pred --cEEEEHHHh-------------------cCCCCC-cHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECC
Confidence 112233211 112332 223333444444 5689999999999999999984 55544
Q ss_pred C
Q 003049 830 A 830 (853)
Q Consensus 830 ~ 830 (853)
+
T Consensus 184 ~ 184 (218)
T PRK11587 184 P 184 (218)
T ss_pred C
Confidence 3
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.093 Score=52.25 Aligned_cols=41 Identities=17% Similarity=0.188 Sum_probs=34.8
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCC-hhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQ-ALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn-~~TA~~VA~~~gI~ 714 (853)
.+-|++.++++.|++.|+++.++|+-+ ...+..+++.+|+.
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~ 84 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP 84 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE
Confidence 567899999999999999999999987 56677777777763
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.05 Score=58.13 Aligned_cols=42 Identities=14% Similarity=0.109 Sum_probs=38.8
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~ 715 (853)
++.|++.++++.|++.|+++.++|+-....+..+-+.+|+..
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~ 150 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEG 150 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHh
Confidence 568999999999999999999999999999999999999863
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.054 Score=51.27 Aligned_cols=42 Identities=12% Similarity=0.174 Sum_probs=36.5
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCC--------hhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQ--------ALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn--------~~TA~~VA~~~gI~ 714 (853)
.++.|++.++++.|+++|+++.++|+.. ...+..+.+.+|+.
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~ 73 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP 73 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC
Confidence 4678999999999999999999999988 66777788888774
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.071 Score=57.22 Aligned_cols=42 Identities=10% Similarity=0.037 Sum_probs=37.1
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.++.|++.++++.|++.|+++.++||.....+..+-+..|+.
T Consensus 100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~ 141 (267)
T PRK13478 100 ATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ 141 (267)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc
Confidence 367899999999999999999999999998888887777765
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.067 Score=55.85 Aligned_cols=42 Identities=19% Similarity=0.255 Sum_probs=37.5
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
-++.|++.+.++.|++.|+++.++|.-+...+...-+..|+.
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 133 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD 133 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH
Confidence 467899999999999999999999998888888877778875
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.075 Score=61.80 Aligned_cols=43 Identities=7% Similarity=0.067 Sum_probs=39.8
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~ 715 (853)
-++.|++.+.++.|++.|+++.++|+-....+..+.+.+|+..
T Consensus 329 ~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~ 371 (459)
T PRK06698 329 GALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQ 371 (459)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHh
Confidence 3789999999999999999999999999999999999999863
|
|
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.056 Score=62.13 Aligned_cols=172 Identities=16% Similarity=0.175 Sum_probs=104.7
Q ss_pred hhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCC-CeEEEccCCCCce--------
Q 003049 659 VENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK-PVLILCPVKNGKV-------- 729 (853)
Q Consensus 659 ~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~-~~~il~~~~~~~~-------- 729 (853)
.-++-.|.|++..+.+.++|....|+.|-++-||.+-.+-.+.+..+-.|.++||-.. +.-|.-..+++..
T Consensus 811 a~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~ 890 (1354)
T KOG4383|consen 811 AFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAH 890 (1354)
T ss_pred HhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCC
Confidence 3367799999999999999999999999999999999999999999999999999743 2322211111100
Q ss_pred -----------eEeecC--CcccccccchhhhccccCceeEEEehhhhHHhhcchh-----------------HHhhccc
Q 003049 730 -----------YEWVSP--DETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSA-----------------VLRVIPY 779 (853)
Q Consensus 730 -----------~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~-----------------~~~~~~~ 779 (853)
-.|..+ ++.+..-.+... .-...-.+--+..+...+.+.+. +.+.=.-
T Consensus 891 ~q~a~qkpSlhddlnqia~ddaeg~lL~~Ee--g~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLL 968 (1354)
T KOG4383|consen 891 EQFAAQKPSLHDDLNQIALDDAEGELLDCEE--GARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLL 968 (1354)
T ss_pred hhhhccCcchhHHHHHhhhcccccceeehhh--cccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCccee
Confidence 001000 000000000000 00000000000001111111111 1111112
Q ss_pred ceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccH--HHHHhCCceEEeccCCC
Q 003049 780 VKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDV--GALKQAHVGVALLNAVP 832 (853)
Q Consensus 780 ~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~--~ALk~AdVGIAl~~~~~ 832 (853)
+-.|..++|+--.+.|+.+|+.|.+|+..|.-.|-. --.-+||++||+..-.+
T Consensus 969 V~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~ 1023 (1354)
T KOG4383|consen 969 VGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEE 1023 (1354)
T ss_pred eeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCC
Confidence 357999999999999999999999999999988733 34468999999975443
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.18 Score=49.55 Aligned_cols=34 Identities=15% Similarity=0.110 Sum_probs=31.1
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHH
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTAC 705 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~ 705 (853)
++.+.++++++++++++.|++++.+||.....+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~ 58 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQAD 58 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHH
Confidence 4677899999999999999999999999988875
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.09 Score=52.46 Aligned_cols=50 Identities=14% Similarity=0.104 Sum_probs=42.4
Q ss_pred eeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCC-ChhhHHHHHHHcCcC
Q 003049 665 FAGFAVFNCPIREDSAKILSELKNSSQDLAMITGD-QALTACYVASQVHIV 714 (853)
Q Consensus 665 f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGD-n~~TA~~VA~~~gI~ 714 (853)
......-+-++.|++.++++.|++.|+++.++|+- ...++..+-..+|+.
T Consensus 36 ~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 36 IIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred EEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 44455556678999999999999999999999965 888999998888874
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.069 Score=55.27 Aligned_cols=41 Identities=17% Similarity=0.192 Sum_probs=37.2
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
++.|++.++++.|++.|+++.++|+=+...+....+.+|+.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVR 134 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChH
Confidence 68999999999999999999999998888888888888875
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.42 Score=53.58 Aligned_cols=52 Identities=19% Similarity=0.292 Sum_probs=39.8
Q ss_pred EEeeChh---hHHHHHHHHHH-cC-----C-EEEEEcCCcccHHHHHh-----CCceEEeccCCCcC
Q 003049 783 FARVAPE---QKELILTTFKA-VG-----R-MTLMCGDGTNDVGALKQ-----AHVGVALLNAVPPT 834 (853)
Q Consensus 783 fAr~sP~---qK~~iV~~Lq~-~g-----~-~v~m~GDG~ND~~ALk~-----AdVGIAl~~~~~~~ 834 (853)
+-.+.|. +|..-|+.|-+ .| . .++++||+.||-.|++. +++||+|+++.+..
T Consensus 291 vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t 357 (384)
T PLN02580 291 VLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKES 357 (384)
T ss_pred EEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCc
Confidence 4466774 89988887765 33 1 25799999999999996 68999999876543
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.05 Score=53.39 Aligned_cols=42 Identities=12% Similarity=0.099 Sum_probs=39.3
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.++.|++.+.+++|++.|++++++|+-+......+.+++|+.
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~ 117 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD 117 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc
Confidence 467899999999999999999999999999999999999987
|
... |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=94.60 E-value=0.14 Score=57.31 Aligned_cols=43 Identities=16% Similarity=0.163 Sum_probs=39.4
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~ 715 (853)
.++.|++.+.++.|++.|+++.++|+-+...+..+-+..||..
T Consensus 215 ~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~ 257 (381)
T PLN02575 215 YRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRG 257 (381)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHH
Confidence 3578999999999999999999999999999999999999863
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.13 Score=51.34 Aligned_cols=28 Identities=14% Similarity=0.114 Sum_probs=25.4
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCh
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQA 701 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~ 701 (853)
++.|++++++++|++.|+++.++|+...
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 4789999999999999999999998764
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.16 Score=50.68 Aligned_cols=41 Identities=12% Similarity=0.176 Sum_probs=34.7
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
-++.|++.++++.|++.|+++.++|+-.... ..+..++|+.
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~ 124 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR 124 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH
Confidence 3688999999999999999999999988777 5555557775
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=94.15 E-value=0.1 Score=52.20 Aligned_cols=40 Identities=10% Similarity=0.150 Sum_probs=34.7
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.++.|++.++++.|++.|+++.++|+- ..+..+-+..|+.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~ 126 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLT 126 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChH
Confidence 478999999999999999999999986 5567777788875
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=94.05 E-value=0.24 Score=53.73 Aligned_cols=38 Identities=11% Similarity=0.267 Sum_probs=33.0
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHc
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQV 711 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~ 711 (853)
++.|++.+.++.|++.|+++.++|+-+......+-+..
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~ 181 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL 181 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 67899999999999999999999998887777665554
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=93.78 E-value=0.27 Score=47.61 Aligned_cols=41 Identities=12% Similarity=0.195 Sum_probs=32.8
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCh---------------hhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQA---------------LTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~---------------~TA~~VA~~~gI~ 714 (853)
++.|++.++++.|++.|+++.++|..+. ..+..+.+.+|+.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 82 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVA 82 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCc
Confidence 5789999999999999999999998762 2345566677764
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=93.60 E-value=0.21 Score=56.63 Aligned_cols=96 Identities=18% Similarity=0.194 Sum_probs=65.3
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHH-HcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVAS-QVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGL 751 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~-~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (853)
-++.|++.+.++.|++.|+++.++|+-....+...-+ ..|+...
T Consensus 92 ~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~----------------------------------- 136 (382)
T PLN02940 92 IKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKES----------------------------------- 136 (382)
T ss_pred CCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhh-----------------------------------
Confidence 3568999999999999999999999998888776654 5676421
Q ss_pred cCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcC---CEEEEEcCCcccHHHHHhCCceEE
Q 003049 752 TDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVG---RMTLMCGDGTNDVGALKQAHVGVA 826 (853)
Q Consensus 752 ~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g---~~v~m~GDG~ND~~ALk~AdVGIA 826 (853)
.+.+++++.. .+..|+ ...+.+.+++.| ..++|+||..+|+.|-++|++...
T Consensus 137 ---Fd~ii~~d~v-------------------~~~KP~-p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I 191 (382)
T PLN02940 137 ---FSVIVGGDEV-------------------EKGKPS-PDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVI 191 (382)
T ss_pred ---CCEEEehhhc-------------------CCCCCC-HHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 1222332211 122332 223334444443 558999999999999999998643
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=93.56 E-value=0.24 Score=49.67 Aligned_cols=27 Identities=15% Similarity=0.153 Sum_probs=25.0
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQ 700 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn 700 (853)
.+.|++.+++++|++.|+++.++|..+
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~ 55 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQS 55 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 468999999999999999999999876
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=93.10 E-value=0.39 Score=50.23 Aligned_cols=111 Identities=20% Similarity=0.185 Sum_probs=71.6
Q ss_pred CCCCcchHHHHHHH--hhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcc
Q 003049 673 CPIREDSAKILSEL--KNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEG 750 (853)
Q Consensus 673 d~lr~~a~~~I~~L--~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (853)
=|+-|+.+++++.| ++.|+.++++|.-|..--.++-+.-|+...-..|.+.+ ..|..
T Consensus 70 ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNp-----a~~~~---------------- 128 (234)
T PF06888_consen 70 IPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNP-----ACFDA---------------- 128 (234)
T ss_pred CCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCC-----ceecC----------------
Confidence 37889999999999 56899999999999999999999999863211122211 00000
Q ss_pred ccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChh-hHHHHHHHHHHc----C---CEEEEEcCCccc-HHHHH--
Q 003049 751 LTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPE-QKELILTTFKAV----G---RMTLMCGDGTND-VGALK-- 819 (853)
Q Consensus 751 ~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~-qK~~iV~~Lq~~----g---~~v~m~GDG~ND-~~ALk-- 819 (853)
+..+.+.-. +.+-+.++.|. =|..+++.+++. | ..|.++|||.|| ||+++
T Consensus 129 ---~G~l~v~py----------------h~h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~ 189 (234)
T PF06888_consen 129 ---DGRLRVRPY----------------HSHGCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLR 189 (234)
T ss_pred ---CceEEEeCc----------------cCCCCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccC
Confidence 001111100 00113355553 699999988875 4 689999999999 45554
Q ss_pred hCCc
Q 003049 820 QAHV 823 (853)
Q Consensus 820 ~AdV 823 (853)
.+|+
T Consensus 190 ~~D~ 193 (234)
T PF06888_consen 190 PRDV 193 (234)
T ss_pred CCCE
Confidence 4555
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=92.93 E-value=1.1 Score=55.99 Aligned_cols=69 Identities=16% Similarity=0.165 Sum_probs=48.2
Q ss_pred HHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHH-hhCCCcEEEEcCC
Q 003049 621 YIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSEL-KNSSQDLAMITGD 699 (853)
Q Consensus 621 ~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L-~~agi~v~miTGD 699 (853)
.++....|.+...|.+++-| |.|++-.-...-.+-+++.+++++| ++.|+.|+++||.
T Consensus 584 ~~~i~~~y~~~~~rlI~LDy---------------------DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR 642 (854)
T PLN02205 584 MEHIVSAYKRTTTRAILLDY---------------------DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSAR 642 (854)
T ss_pred HHHHHHHHHhhcCeEEEEec---------------------CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCC
Confidence 34455666666677777655 4444433222335567899999997 7789999999999
Q ss_pred ChhhHHHHHHH
Q 003049 700 QALTACYVASQ 710 (853)
Q Consensus 700 n~~TA~~VA~~ 710 (853)
...+....-..
T Consensus 643 ~~~~L~~~f~~ 653 (854)
T PLN02205 643 SRKTLADWFSP 653 (854)
T ss_pred CHHHHHHHhCC
Confidence 99998877644
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=92.92 E-value=0.17 Score=49.10 Aligned_cols=38 Identities=16% Similarity=0.217 Sum_probs=33.5
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHc
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQV 711 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~ 711 (853)
+..+++.+.++.|++.|+++.++|+-+...+....+..
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 34579999999999999999999999999888887775
|
HAD subfamilies caused by an overly broad single model. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.86 E-value=0.34 Score=53.97 Aligned_cols=26 Identities=19% Similarity=0.267 Sum_probs=24.7
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITG 698 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTG 698 (853)
.++.|++.+++++|++.|+++.++|.
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTN 54 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTN 54 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEEC
Confidence 57899999999999999999999998
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.84 E-value=0.48 Score=49.10 Aligned_cols=41 Identities=12% Similarity=0.194 Sum_probs=35.4
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.++.|++.++++.|+ .|+++.++|......+...-+..|+.
T Consensus 94 ~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (224)
T PRK09449 94 CTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLR 134 (224)
T ss_pred CccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChH
Confidence 357899999999999 68999999998888888777888875
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=92.50 E-value=0.74 Score=47.51 Aligned_cols=41 Identities=10% Similarity=0.105 Sum_probs=37.3
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.++.|++.++++.|++. +++.++|+-....+..+.+++|+.
T Consensus 96 ~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~ 136 (224)
T TIGR02254 96 HQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLF 136 (224)
T ss_pred CeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcH
Confidence 46789999999999999 999999999888888888888885
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=92.35 E-value=0.36 Score=49.20 Aligned_cols=40 Identities=15% Similarity=0.238 Sum_probs=32.8
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
++-|++.++++.|++.|+++.++|+-.. .+..+.+.+|+.
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~-~~~~~l~~~~l~ 144 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDS-RLRGLLEALGLL 144 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCch-hHHHHHHHCCcH
Confidence 5789999999999999999999997554 346667777774
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.27 E-value=0.65 Score=47.16 Aligned_cols=42 Identities=10% Similarity=0.169 Sum_probs=38.0
Q ss_pred CCCCcchHHHHHHHhhCCC-cEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQ-DLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi-~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
=|+-|+..++|+.+++.|. .++++|--|..--..+-+..||.
T Consensus 83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~ 125 (256)
T KOG3120|consen 83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIH 125 (256)
T ss_pred CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHH
Confidence 3778999999999999998 99999999999888888888885
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=92.11 E-value=0.42 Score=49.57 Aligned_cols=33 Identities=12% Similarity=0.243 Sum_probs=28.3
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChhhH
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTA 704 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA 704 (853)
..++.|++.+.|+.|++.|+++.++||-+....
T Consensus 76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~ 108 (220)
T PLN02811 76 TSDLMPGAERLVRHLHAKGIPIAIATGSHKRHF 108 (220)
T ss_pred hCCCCccHHHHHHHHHHCCCcEEEEeCCchhhH
Confidence 346789999999999999999999999776543
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=91.91 E-value=0.41 Score=49.79 Aligned_cols=42 Identities=10% Similarity=0.052 Sum_probs=34.8
Q ss_pred eecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHc
Q 003049 670 VFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQV 711 (853)
Q Consensus 670 ~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~ 711 (853)
.++.++.||+.+++++|+++|+++.++|..+......+-+..
T Consensus 91 ~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~ 132 (220)
T TIGR01691 91 ELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHS 132 (220)
T ss_pred CcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhc
Confidence 345689999999999999999999999998877666655544
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=91.90 E-value=0.18 Score=48.87 Aligned_cols=44 Identities=14% Similarity=0.026 Sum_probs=38.8
Q ss_pred eecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 670 VFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 670 ~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.+.-++||++.+.++.|+ .++++.++|.=+...+..+-+.+|+.
T Consensus 41 ~~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~ 84 (148)
T smart00577 41 GVYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPK 84 (148)
T ss_pred EEEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcC
Confidence 345578999999999999 57999999999999999999988874
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=91.57 E-value=0.8 Score=48.95 Aligned_cols=43 Identities=2% Similarity=-0.038 Sum_probs=33.8
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChhhH---HHHHHHcCcC
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTA---CYVASQVHIV 714 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA---~~VA~~~gI~ 714 (853)
..++-|++.+.++.|++.|+++.++|+-..... ...-+..|+.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~ 161 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFP 161 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcC
Confidence 456789999999999999999999999764433 3445567775
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=90.08 E-value=2 Score=44.79 Aligned_cols=43 Identities=7% Similarity=0.074 Sum_probs=33.4
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHH---HHHHHcCcC
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTAC---YVASQVHIV 714 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~---~VA~~~gI~ 714 (853)
+.|.-|++.++++.|++.|++|+++||....... .--++.|+.
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~ 163 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFT 163 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCC
Confidence 3588899999999999999999999999975522 222345654
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=89.89 E-value=1.1 Score=45.57 Aligned_cols=143 Identities=20% Similarity=0.215 Sum_probs=77.8
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcc-cc
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEG-LT 752 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 752 (853)
++-|++.++++.|++. ...+++|---..-+..+|+.+|+......-- .+ +.|. ++.......+ +.
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~T-------e~---~lD~---~~~PeeeR~E~L~ 148 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGT-------EV---DLDS---IAVPEEEREELLS 148 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccc-------cc---cCcc---ccCChHHHHHHHH
Confidence 5679999999999865 5667777778888999999999964321100 00 0000 0111111101 11
Q ss_pred Cce-eEEEehhhh-HHhhc---c---hhHHhhcccceEEEeeChhhHHHHHHHHHH---cCCEEEEEcCCcccHHHHHhC
Q 003049 753 DAH-DLCIGGDCF-EMLQQ---T---SAVLRVIPYVKVFARVAPEQKELILTTFKA---VGRMTLMCGDGTNDVGALKQA 821 (853)
Q Consensus 753 ~~~-~l~itG~~l-~~l~~---~---~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~---~g~~v~m~GDG~ND~~ALk~A 821 (853)
.-+ .-.++|+.+ +.+.+ + .+..+++..+++... ..|.++++.+-+ .....+.+||.+.|+.+|+.+
T Consensus 149 ~~~~~~~~~geelfe~lDe~F~rLip~E~gki~~~vk~VGg---g~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~ 225 (315)
T COG4030 149 IIDVIASLSGEELFEKLDELFSRLIPSEVGKIVESVKAVGG---GEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAA 225 (315)
T ss_pred hcCccccccHHHHHHHHHHHHhhcCHHHHHHHHHhhhhccC---cchhHHHHHHHhhcCCCcceeEecCcccchHHHHHh
Confidence 111 224566643 22221 1 233444444444333 345556555444 234456779999999999988
Q ss_pred C-c-eEEec-cCCCc
Q 003049 822 H-V-GVALL-NAVPP 833 (853)
Q Consensus 822 d-V-GIAl~-~~~~~ 833 (853)
. - |+|+. ||.+-
T Consensus 226 rgrGglAvaFNGNeY 240 (315)
T COG4030 226 RGRGGLAVAFNGNEY 240 (315)
T ss_pred hccCceEEEecCCcc
Confidence 6 2 36655 66544
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=89.86 E-value=1.3 Score=46.75 Aligned_cols=48 Identities=6% Similarity=0.046 Sum_probs=36.7
Q ss_pred eEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHH--HHHHHcCcC
Q 003049 667 GFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTAC--YVASQVHIV 714 (853)
Q Consensus 667 G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~--~VA~~~gI~ 714 (853)
|.+.-...+-|++.+++++|+++|+++.++|.-....+. ...+++|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 445556778999999999999999999999995443333 455777775
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.83 E-value=1.1 Score=43.62 Aligned_cols=67 Identities=13% Similarity=0.212 Sum_probs=50.6
Q ss_pred HHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhH
Q 003049 625 YKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTA 704 (853)
Q Consensus 625 ~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA 704 (853)
.+.+.++|.|-+.+-. ++ +++..= ....-|+.++-+.+++++|++++++|--++..+
T Consensus 20 ~~~L~~~Gikgvi~Dl---DN------------------TLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV 76 (175)
T COG2179 20 PDILKAHGIKGVILDL---DN------------------TLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRV 76 (175)
T ss_pred HHHHHHcCCcEEEEec---cC------------------ceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHH
Confidence 4677889999887632 21 222111 123567888999999999999999999999999
Q ss_pred HHHHHHcCcC
Q 003049 705 CYVASQVHIV 714 (853)
Q Consensus 705 ~~VA~~~gI~ 714 (853)
..+|+.+|+.
T Consensus 77 ~~~~~~l~v~ 86 (175)
T COG2179 77 ARAAEKLGVP 86 (175)
T ss_pred HhhhhhcCCc
Confidence 9999999985
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=89.41 E-value=1.3 Score=44.87 Aligned_cols=40 Identities=15% Similarity=0.257 Sum_probs=28.1
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
++.|++.++++.|++.+ +.+++|.-+..+....-+.+|+.
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~ 113 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLN 113 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHH
Confidence 47899999999999875 56677765544444455566653
|
2 hypothetical protein; Provisional |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=89.34 E-value=0.29 Score=51.91 Aligned_cols=45 Identities=31% Similarity=0.409 Sum_probs=36.4
Q ss_pred hhHHHHHHHHHHc-C---CEEEEEcCCcccHHHHHhCCceEEeccCCCc
Q 003049 789 EQKELILTTFKAV-G---RMTLMCGDGTNDVGALKQAHVGVALLNAVPP 833 (853)
Q Consensus 789 ~qK~~iV~~Lq~~-g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~ 833 (853)
..|...|+.|++. | ..|+.|||..||.+||..++-||.++|+.++
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e 212 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPE 212 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHH
Confidence 4699999988863 3 3578899999999999999999999998887
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=89.10 E-value=1.4 Score=43.65 Aligned_cols=39 Identities=10% Similarity=0.193 Sum_probs=30.5
Q ss_pred CcchHHHHHHHhhCCCcEEEEcCCChh------------hHHHHHHHcCcC
Q 003049 676 REDSAKILSELKNSSQDLAMITGDQAL------------TACYVASQVHIV 714 (853)
Q Consensus 676 r~~a~~~I~~L~~agi~v~miTGDn~~------------TA~~VA~~~gI~ 714 (853)
-|++.++++.|++.|+++.++|.-... .+..+.+.+|+.
T Consensus 44 ~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 44 YPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred cCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 489999999999999999999965432 345566777763
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=89.08 E-value=1.1 Score=44.30 Aligned_cols=26 Identities=19% Similarity=0.300 Sum_probs=23.7
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGD 699 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGD 699 (853)
++-|++.+++++|++.|+++.++|--
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 46789999999999999999999974
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=88.19 E-value=2.1 Score=42.76 Aligned_cols=27 Identities=22% Similarity=0.325 Sum_probs=24.5
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCCCh
Q 003049 675 IREDSAKILSELKNSSQDLAMITGDQA 701 (853)
Q Consensus 675 lr~~a~~~I~~L~~agi~v~miTGDn~ 701 (853)
+.|++.++|+.|+++|+++.++|.=+.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 578999999999999999999997663
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=87.89 E-value=1.8 Score=47.53 Aligned_cols=48 Identities=13% Similarity=0.174 Sum_probs=40.2
Q ss_pred eEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHH---HHcCcC
Q 003049 667 GFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVA---SQVHIV 714 (853)
Q Consensus 667 G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA---~~~gI~ 714 (853)
|.+.-.+.+=|++.++|++|++.|++++++|+....+...++ +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 555556667799999999999999999999999988888887 456664
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=87.30 E-value=0.92 Score=46.54 Aligned_cols=32 Identities=19% Similarity=0.212 Sum_probs=27.4
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChhh
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQALT 703 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~T 703 (853)
.-++.|++.++++.|++.|+++.++|......
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~ 123 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTD 123 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCcc
Confidence 34678999999999999999999999876543
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.52 E-value=5.8 Score=40.48 Aligned_cols=38 Identities=16% Similarity=0.274 Sum_probs=34.3
Q ss_pred chHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC
Q 003049 678 DSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (853)
Q Consensus 678 ~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~ 715 (853)
.+.+.+.+|+++|++|+.+|--....-...-+.+|.-.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~ 64 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQG 64 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCC
Confidence 58899999999999999999998888888899999863
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=86.51 E-value=2.1 Score=40.33 Aligned_cols=39 Identities=15% Similarity=0.069 Sum_probs=33.9
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCC-ChhhHHHHHHHcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGD-QALTACYVASQVH 712 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGD-n~~TA~~VA~~~g 712 (853)
++.+++.+.++.|++.|+++.++|+- .+..+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 6776666666666
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=85.70 E-value=1.6 Score=44.41 Aligned_cols=32 Identities=13% Similarity=0.385 Sum_probs=27.7
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHH
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTAC 705 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~ 705 (853)
++.|++.++++.|++.|+++.++|.-+.....
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~ 115 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTT 115 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHH
Confidence 57899999999999999999999997765443
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=85.67 E-value=2.1 Score=44.17 Aligned_cols=39 Identities=3% Similarity=0.071 Sum_probs=32.5
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.++.|++.++++.| ++++.++|+.....+..+=+..|+.
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~ 125 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGML 125 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChH
Confidence 45678999999999 4899999999887777777777775
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=85.65 E-value=3.5 Score=40.86 Aligned_cols=43 Identities=19% Similarity=0.184 Sum_probs=36.9
Q ss_pred cCCCCcchHHHHHHHhhCCC--cEEEEcCC-------ChhhHHHHHHHcCcC
Q 003049 672 NCPIREDSAKILSELKNSSQ--DLAMITGD-------QALTACYVASQVHIV 714 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi--~v~miTGD-------n~~TA~~VA~~~gI~ 714 (853)
++.+-|+..+.+++|++.+. +++++|-- +...|.++++.+||.
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp 108 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP 108 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc
Confidence 46678899999999999886 59999986 478899999999975
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=84.74 E-value=2.6 Score=42.22 Aligned_cols=38 Identities=11% Similarity=0.117 Sum_probs=32.3
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 675 lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
+-| ..++++.|++. ++..++||.....+..+-+..|+.
T Consensus 89 ~~~-~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~ 126 (188)
T PRK10725 89 PLP-LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLR 126 (188)
T ss_pred Ccc-HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcH
Confidence 445 46899999875 899999999999999999999986
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=84.19 E-value=16 Score=40.81 Aligned_cols=46 Identities=11% Similarity=-0.005 Sum_probs=36.6
Q ss_pred CcceeeEeeecC--CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHH
Q 003049 662 GLTFAGFAVFNC--PIREDSAKILSELKNSSQDLAMITGDQALTACYVA 708 (853)
Q Consensus 662 dl~f~G~l~~~d--~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA 708 (853)
|.|++-+.--.+ .+-+++.++|++|. .+++++++||........+.
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 566665554333 36789999999999 77999999999999988873
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=84.19 E-value=2.2 Score=42.70 Aligned_cols=38 Identities=13% Similarity=0.078 Sum_probs=33.1
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
++.+++.+++++|+ .++.++|.-+...+..+.+..|+.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~ 121 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIE 121 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcH
Confidence 46789999999998 479999999888899999999985
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=84.18 E-value=2.9 Score=53.69 Aligned_cols=41 Identities=7% Similarity=0.050 Sum_probs=37.3
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.+-|++.+.+++|+++|+++.++|+-....+..+-+..|+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~ 201 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLP 201 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 35799999999999999999999999999988888888884
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=83.15 E-value=2.1 Score=45.27 Aligned_cols=49 Identities=16% Similarity=0.064 Sum_probs=36.5
Q ss_pred EEEeeChhhHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhC--------CceEEeccC
Q 003049 782 VFARVAPEQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQA--------HVGVALLNA 830 (853)
Q Consensus 782 VfAr~sP~qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~A--------dVGIAl~~~ 830 (853)
+-.+-.+-+|...++.+.+ .+ ..++|+||+.||..|++.+ ..||+++.+
T Consensus 159 ~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g 219 (244)
T TIGR00685 159 VELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG 219 (244)
T ss_pred EEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC
Confidence 3444556688888877654 33 4689999999999999999 478888533
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=82.42 E-value=3.9 Score=45.13 Aligned_cols=41 Identities=17% Similarity=0.176 Sum_probs=36.5
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHH----cCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQ----VHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~----~gI~ 714 (853)
++.+++.++|+.|++.|+.+.++|.-+...|..+-++ +|+.
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~ 75 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQA 75 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcH
Confidence 4578999999999999999999999999999998887 6654
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 853 | ||||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 4e-18 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 3e-17 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 6e-17 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 6e-17 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 2e-16 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 3e-16 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 6e-16 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 6e-16 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 2e-15 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 3e-12 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 4e-04 |
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 853 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 3e-57 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 4e-56 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 3e-49 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-48 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 3e-44 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 9e-16 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-15 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-04 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 4e-07 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 4e-05 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 6e-06 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 2e-04 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 6e-06 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 2e-04 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-05 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 6e-05 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-04 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 2e-05 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 1e-04 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-04 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-04 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 3e-04 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 9e-04 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 211 bits (538), Expect = 3e-57
Identities = 131/597 (21%), Positives = 209/597 (35%), Gaps = 145/597 (24%)
Query: 259 VHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAI-VNEAILTGEST 317
V R GKW + LVPGD+VSI G +PAD +L G + V+++ LTGES
Sbjct: 134 VLRDGKWSEQEAAILVPGDIVSI--KLGD-----IIPADARLLEGDPLKVDQSALTGESL 186
Query: 318 PQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFE 377
P K +F G+ Q G AVV+ TG
Sbjct: 187 PVTK----------------HPGQEVFSGSTCKQ-------------GEIEAVVIATGVH 217
Query: 378 TSQGKLMRTILFSTE------RVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSK 431
T GK + + + +TA I +V +I + ++ D
Sbjct: 218 TFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQRRKYRD----- 272
Query: 432 YKLFLSCSLIITSVIPPE-LPMELSIAVNTSLIALARRGIFCTEPFRIP----FAGKVDM 486
+ L+I + P +P LS+ + L+++G R+ AG +D+
Sbjct: 273 -GIDNLLVLLIGGI--PIAMPTVLSVTMAIGSHRLSQQGAITK---RMTAIEEMAG-MDV 325
Query: 487 CCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQE--------ILASCHALVFVD 538
C DKTGTLT + + ++ ++ +V + E +AS
Sbjct: 326 LCSDKTGTLTLNKL-----------SVDKNLVEVFCKGVEKDQVLLFAAMASRVEN---- 370
Query: 539 NKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQE- 597
D ++ A + + K + + V F KR ++
Sbjct: 371 ----QDAIDAAMVGMLA-DPKEARAGIRE---------VHFLPFNPVDKRTALTYIDGSG 416
Query: 598 EFFAFVKGAPETIQDRLT---DLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSL 654
+ KGAPE I + DL + KY +G R LA+A + +P+ T
Sbjct: 417 NWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKT------- 469
Query: 655 HRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714
++ F G P R DSA+ + N ++ MITGDQ ++ +
Sbjct: 470 -KESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 528
Query: 715 TKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVL 774
T + + L + V
Sbjct: 529 TN----------------------------------MYPSSALLGTHKDANLAS--IPVE 552
Query: 775 RVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAV 831
+I FA V PE K I+ + + M GDG ND ALK+A +G+A+ +A
Sbjct: 553 ELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADAT 609
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 207 bits (530), Expect = 4e-56
Identities = 112/595 (18%), Positives = 203/595 (34%), Gaps = 143/595 (24%)
Query: 259 VHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAI--VNEAILTGES 316
V R G ++ ++VPGD++ + G +PAD I+ A V+++ LTGES
Sbjct: 182 VLRDGTLKEIEAPEVVPGDILQV--EEGTI-----IPADGRIVTDDAFLQVDQSALTGES 234
Query: 317 TPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGF 376
+K K +F + + + G V+ TG
Sbjct: 235 LAV-----------DK-----HKGDQVFASSAVKR-------------GEAFVVITATGD 265
Query: 377 ETSQGKLMRTILFSTERVT-------ANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTR 429
T G+ + ++ + ++F ++ V + + +
Sbjct: 266 NTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLI-VWVSSFYRSNPIVQ--- 321
Query: 430 SKYKLFLSCSLIITSVIPPE-LPMELSIAVNTSLIALARRGIFCTEPFRIP----FAGKV 484
L + ++ I V P LP ++ + LA++ ++ AG V
Sbjct: 322 ---ILEFTLAITIIGV--PVGLPAVVTTTMAVGAAYLAKKKAIVQ---KLSAIESLAG-V 372
Query: 485 DMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGD 544
++ C DKTGTLT + + ++ + ED + LA+ K D
Sbjct: 373 EILCSDKTGTLTKNKLSLHDPYTVAGVDPED------LMLTACLAASR------KKKGID 420
Query: 545 PLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQE-EFFAFV 603
++KA LK + + + + +++Q H F K++ VV + E V
Sbjct: 421 AIDKAFLKSL-------KYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCV 473
Query: 604 KGAPETIQDRLT-------DLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHR 656
KGAP + + ++ +Y ++ +G R L +A K
Sbjct: 474 KGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARK--------------- 518
Query: 657 DEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK 716
E G P R D+ K + E K + M+TGD A + Q+ + T
Sbjct: 519 -RGEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTN 577
Query: 717 PVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRV 776
+ N + + S V
Sbjct: 578 -------IYNAER-------------LGLGGGGDMPG-----------------SEVYDF 600
Query: 777 IPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAV 831
+ FA V P+ K ++ + G + M GDG ND +LK+A G+A+ +
Sbjct: 601 VEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEGSS 655
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 187 bits (477), Expect = 3e-49
Identities = 136/663 (20%), Positives = 228/663 (34%), Gaps = 156/663 (23%)
Query: 255 QTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADM-LILGGSAIVNEAILT 313
Q +V R G+ + +V GD+V + + G D+ +PAD+ +I V+ + LT
Sbjct: 172 QQALVIRDGEKSTINAEFVVAGDLVEV-----KGG-DR-IPADLRIISAHGCKVDNSSLT 224
Query: 314 GESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLR 373
GES PQ + + E R+ + F T ++ G VV+
Sbjct: 225 GESEPQTRSPEF---SSENPLETRN---IAFFSTNCVE-------------GTARGVVVY 265
Query: 374 TGFETSQGKL---------MRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGM 424
TG T G++ RT + + +FL V +L
Sbjct: 266 TGDRTVMGRIATLASGLEVGRTPI--AIEIEHFIHIITGVAVFLGVS-FFILSLILGYSW 322
Query: 425 EDPTRSKYKLFLSC-SLIITSVIPPELP----MELSIAVNTSLIALARRGIFCTEPFRIP 479
+ + +I+ + +P L + L++ +AR+ +
Sbjct: 323 LE-------AVIFLIGIIV-ANVPEGLLATVTVCLTLTAKR----MARKNCLVK---NLE 367
Query: 480 FA----GKVDMCCFDKTGTLT----------SDDMEFR-GVVGLSNAELEDDMTKVPVRT 524
A G C DKTGTLT D+ + D +
Sbjct: 368 -AVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSAL 426
Query: 525 QEILASCHALVFVDN---------KLVGDP----LEKAALK-GIDWSYKSDEKAMPKRGG 570
I A C+ VF + GD L K + PK
Sbjct: 427 SRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGS--VQGMRDRNPK--- 481
Query: 571 GNAVQIVQRHHFASHLKRMSVVVRVQE----EFFAFVKGAPETIQDR------------L 614
+ F S K + ++ + +KGAPE I DR L
Sbjct: 482 ------IVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPL 535
Query: 615 TD-LPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDE---VENGLTFAGFAV 670
+ + ++ Y + G RVL +LP+ ++ DE L F G
Sbjct: 536 KEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMA 595
Query: 671 FNCPIREDSAKILSELKNSSQDLA-----MITGDQALTACYVASQVHIVTK--PVLILCP 723
P R + + ++ A M+TGD +TA +A V I+++ +
Sbjct: 596 MIDPPRAAVPDAVGKCRS-----AGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIA 650
Query: 724 VKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVF 783
+ V+P + + +++ L+ E+L +L + VF
Sbjct: 651 ARLNIPIGQVNPRDAKACVVHGSDLKDLST-----------EVLDD---ILHYHTEI-VF 695
Query: 784 ARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEA 843
AR +P+QK +I+ + G + + GDG ND ALK+A +GVA+ G S S+
Sbjct: 696 ARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM---------GISGSDV 746
Query: 844 SKD 846
SK
Sbjct: 747 SKQ 749
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 185 bits (473), Expect = 1e-48
Identities = 124/662 (18%), Positives = 225/662 (33%), Gaps = 154/662 (23%)
Query: 255 QTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADM-LILGGSAIVNEAILT 313
Q V R G ++ LV GD+V + + G D+ VPAD+ ++ V+ + LT
Sbjct: 177 QQATVIRDGDKFQINADQLVVGDLVEM-----KGG-DR-VPADIRILQAQGRKVDNSSLT 229
Query: 314 GESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLR 373
GES PQ + T E R+ + F T L+ G +V+
Sbjct: 230 GESEPQTRSPEC---THESPLETRN---IAFFSTMCLE-------------GTAQGLVVN 270
Query: 374 TGFETSQGK---LMRTI------LFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGM 424
TG T G+ L + + + + +
Sbjct: 271 TGDRTIIGRIASLASGVENEKTPI--AIEIEHFVDIIAGLAILFGA-TFFIVAMCIGYTF 327
Query: 425 EDPTRSKYKLFLSC-SLIITSVIPPELP----MELSIAVNTSLIALARRGIFCTEPFRIP 479
+ ++++ + +P L + LS+ LA + +
Sbjct: 328 LR-------AMVFFMAIVV-AYVPEGLLATVTVCLSLTAKR----LASKNCVVK---NLE 372
Query: 480 FA----GKVDMCCFDKTGTLT----------SDDMEFR-GVVGLSNAELEDDMTKVPVRT 524
A G + C DKTGTLT D+ + + D ++
Sbjct: 373 -AVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRAL 431
Query: 525 QEILASCHALVFVDN---------KLVGDP----LEKAALKGIDWSYKSDEKAMPKRGGG 571
+L C+ F ++GD L K + + + + PK
Sbjct: 432 CRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTL-GNAMGYRERFPK---- 486
Query: 572 NAVQIVQRHHFASHLKRMSVVVRVQE----EFFAFVKGAPETIQDR------------LT 615
V F S K + +++ +KGAPE + +R L
Sbjct: 487 -----VCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLD 541
Query: 616 D-LPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDE---VENGLTFAGFAVF 671
+ ++ Y G RVL L + + + +GL+FAG
Sbjct: 542 EQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSM 601
Query: 672 NCPIREDSAKILSELKNSSQDLA-----MITGDQALTACYVASQVHIVTK--PVLILCPV 724
P R + + + A M+TGD +TA +A+ V I+++ +
Sbjct: 602 IDPPRATVPDAVLKCRT-----AGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAA 656
Query: 725 KNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFA 784
+ + V+ + + +++ + L + + VFA
Sbjct: 657 RLRVPVDQVNRKDARACVINGMQLKDMDP-----------SELVEALRTHPEM----VFA 701
Query: 785 RVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEAS 844
R +P+QK +I+ + + +G + + GDG ND ALK+A +GVA+ G + S+A+
Sbjct: 702 RTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAM---------GIAGSDAA 752
Query: 845 KD 846
K+
Sbjct: 753 KN 754
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 172 bits (437), Expect = 3e-44
Identities = 151/667 (22%), Positives = 236/667 (35%), Gaps = 175/667 (26%)
Query: 259 VHRCGKWV--KLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAI---VNEAILT 313
V+R + ++ D+VPGD+V + + G DK VPAD+ IL + V+++ILT
Sbjct: 130 VYRADRKSVQRIKARDIVPGDIVEV--AVG----DK-VPADIRILSIKSTTLRVDQSILT 182
Query: 314 GESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLR 373
GES K + + DK ++LF GT I G L +V
Sbjct: 183 GESVSVIKHTEPVPDPRAVNQ---DKKNMLFSGTNIAA-------------GKALGIVAT 226
Query: 374 TGFETSQGKLMRTILFSTERVT----------ANSWESGLFILFLVVFAV-IAAGYVLKK 422
TG T GK+ R + +TE+ + ++ + V+ + I
Sbjct: 227 TGVSTEIGKI-RDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVH 285
Query: 423 GMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIAL-----ARRGIFCTEPFR 477
G + Y ++ +L + + IP LP AV T+ +AL A++
Sbjct: 286 GGSWIRGAIYYFKIAVALAV-AAIPEGLP-----AVITTCLALGTRRMAKKN-------- 331
Query: 478 IPFA-----------GKVDMCCFDKTGTLTSDDM-------------------EFR---- 503
A G + C DKTGTLT++ M EF
Sbjct: 332 ---AIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGS 388
Query: 504 -----GVVGLSNAELEDDMTKVPVRTQEILASC-HALVFVDNK-----LVGDPLEKA--- 549
G V ++ + V I A C + + + VG+ E A
Sbjct: 389 TYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTT 448
Query: 550 -ALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHH------FASHLKRMSVVVRVQEE---- 598
K ++ + + +R I Q F+ K MSV +
Sbjct: 449 LVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAA 508
Query: 599 --FFAFVKGAPETIQDR------------LTD-LPSSYIETYKKYT--HQGSRVLALAFK 641
FVKGAPE + DR +T + + K++ R LALA +
Sbjct: 509 VGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATR 568
Query: 642 SLPDM--TVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGD 699
P + S E E LTF G P R++ + +++ + MITGD
Sbjct: 569 DTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGD 628
Query: 700 QALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCI 759
TA + ++ I + + G+ E + L A
Sbjct: 629 NKGTAIAICRRIGIFGENEEVADRAYTGR------------------EFDDLPLA----- 665
Query: 760 GGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALK 819
+Q A R FARV P K I+ ++ +T M GDG ND ALK
Sbjct: 666 --------EQREACRRA----CCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALK 713
Query: 820 QAHVGVA 826
+A +G+A
Sbjct: 714 KAEIGIA 720
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 74.9 bits (185), Expect = 9e-16
Identities = 36/150 (24%), Positives = 52/150 (34%), Gaps = 29/150 (19%)
Query: 542 VGDPLEKAALKGID-WSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQ-EEF 599
+ + L+ A L+G D S +S K + F +RMSVVV E
Sbjct: 32 LKNLLDTAVLEGTDEESARSLASRWQK---------IDEIPFDFERRRMSVVVAENTEHH 82
Query: 600 FAFVKGAPETIQDR------------LTDLPSSYI-ETYKKYTHQGSRVLALAFKSLPDM 646
KGA + I + L D+ I QG RV+A+A K LP
Sbjct: 83 QLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLP-- 140
Query: 647 TVSDARSLHRDEVENGLTFAGFAVFNCPIR 676
++ E+ L G+ F
Sbjct: 141 ---AREGDYQRADESDLILEGYIAFLDHHH 167
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 81.1 bits (199), Expect = 1e-15
Identities = 87/663 (13%), Positives = 173/663 (26%), Gaps = 198/663 (29%)
Query: 121 PVDEDEICFDFRKQHFIYSREKGTFCK------LPYPTKETFGYYL---KCTGHSTEAKI 171
V ED +F + + K K + + L + +
Sbjct: 23 SVFEDAFVDNFDCKD-VQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQK 81
Query: 172 AVATE-----KWGRNVF--EYPQPTFQKLMKENCMEPFF-VFQVFCVGLWCLDEYWYYSL 223
V K+ + E QP+ M + + QVF
Sbjct: 82 FVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVF--------------- 126
Query: 224 FTLFMLFMFESTMAKSRLKTLTEIRR----VRVDNQTIMVHR---CGKWVKLAG------ 270
+ SRL+ ++R+ +R + +++ GK +A
Sbjct: 127 ----------AKYNVSRLQPYLKLRQALLELR-PAKNVLIDGVLGSGKTW-VALDVCLSY 174
Query: 271 --TDLVPGDV--VSIGRSSGQTGEDKSVPADM--LILGGSAIVNEAILTGESTPQWKVSI 324
+ + +++ + ++V + L+ + SI
Sbjct: 175 KVQCKMDFKIFWLNLKNCN----SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230
Query: 325 MGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLM 384
+L + + L +L + + + C
Sbjct: 231 QAEL--RRLLKSKPYENCLL----VLLNVQNAKA-WNAFNLSC----------------- 266
Query: 385 RTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYK-----LFLSCS 439
IL +T R V ++A ++ + + L L
Sbjct: 267 -KILLTT-RFKQ-------------VTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYL 311
Query: 440 LIITSVIPPEL----PMELSIAVNTSLIALARRGIFCT-EPFRIPFAGKVDMC---CFDK 491
+P E+ P LS +IA + R T + ++ K+ +
Sbjct: 312 DCRPQDLPREVLTTNPRRLS------IIAESIRDGLATWDNWKHVNCDKLTTIIESSLNV 365
Query: 492 TGTLTSDDME--FRGVVGLSNAELEDDMTKVPVRT-------------QEILASCH--AL 534
L + F + + +P ++ H +L
Sbjct: 366 ---LEPAEYRKMFDRL-----SVFPPS-AHIPTILLSLIWFDVIKSDVMVVVNKLHKYSL 416
Query: 535 VFVDNK------------LVGDPLEKAAL--KGIDWSYKSDEKAMPKRGGGNAVQIVQRH 580
V K L + AL +D Y + +
Sbjct: 417 VEKQPKESTISIPSIYLELKVKLENEYALHRSIVD-HYNIPKTFDSDDLIPPYLDQYFYS 475
Query: 581 HFASHLKRMSVVVRVQEEF------FAFVK----------GAPETIQDRLTDLPSSYIET 624
H HLK + R+ F F F++ A +I + L L +
Sbjct: 476 HIGHHLKNIEHPERM-TLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQL-----KF 529
Query: 625 YKKY----THQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSA 680
YK Y + R++ LP + + S + D + L A+F E++
Sbjct: 530 YKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIF-----EEAH 584
Query: 681 KIL 683
K +
Sbjct: 585 KQV 587
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.8 bits (105), Expect = 1e-04
Identities = 68/531 (12%), Positives = 142/531 (26%), Gaps = 173/531 (32%)
Query: 325 MGRETGEKLSARRDKSHVLFGGTKILQHTPD---KTFPLK-TPDGGCLAVVLRTGFETSQ 380
M ETGE +D IL D F K D
Sbjct: 7 MDFETGEHQYQYKD----------ILSVFEDAFVDNFDCKDVQD---------------- 40
Query: 381 GKLMRTILFSTER---VTANSWESGLFILFLV------------VFAVIAAGY-----VL 420
+ ++IL E + + SG LF V V+ Y +
Sbjct: 41 --MPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPI 98
Query: 421 KKGMEDPTRSKYKLFLSCSLIITSVIPPELPM----------------ELS----IAVN- 459
K P+ ++++ + + EL + ++
Sbjct: 99 KTEQRQPSM-MTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG 157
Query: 460 ------TSLIALARR--GIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA 511
T + + C F+I F + C + T+ + + +
Sbjct: 158 VLGSGKTWVALDVCLSYKVQCKMDFKI-FWLNLKNC--NSPETVLEMLQKLLYQIDPNWT 214
Query: 512 ELEDDMTKVPVRTQEI-------LAS---CHALVFVDNKLVGDPLEKAALKGIDWSYK-- 559
D + + +R I L S + L+ + N V + A + S K
Sbjct: 215 SRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN--VQNA---KAWNAFNLSCKIL 269
Query: 560 ---SDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFA-------------FV 603
++ I HH + + +
Sbjct: 270 LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEV------KSLLLKYLDCRPQDLPREVL 323
Query: 604 KGAP---ETIQDRLTDLPSSYIETYKKYTH-QGSRVLALAFKSL-PDMTVSDARSLHRDE 658
P I + + D ++ + +K + + ++ + L P + R +
Sbjct: 324 TTNPRRLSIIAESIRDGLAT-WDNWKHVNCDKLTTIIESSLNVLEPA----EYRKMFDR- 377
Query: 659 VENGLTFAGFAVF--NCPI-------------REDSAKILSELKNSSQDLAMITGDQA-- 701
+VF + I + D ++++L S ++
Sbjct: 378 ---------LSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYS----LVEKQPKES 424
Query: 702 ---LTACYVASQVHIVTKPVL---ILCPVKNGKVYEW--VSPDETEKIQYS 744
+ + Y+ +V + + L I+ K ++ + P ++ YS
Sbjct: 425 TISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYS 475
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 51.3 bits (124), Expect = 4e-07
Identities = 19/46 (41%), Positives = 25/46 (54%)
Query: 781 KVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVA 826
+ ++ ++PE K I+ K G LM GDG ND AL A V VA
Sbjct: 177 EYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVA 222
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 45.1 bits (108), Expect = 4e-05
Identities = 8/40 (20%), Positives = 20/40 (50%)
Query: 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHI 713
R + L +LKN + +++GD+ ++ +++I
Sbjct: 136 VPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNI 175
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 47.8 bits (115), Expect = 6e-06
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 781 KVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVA 826
FA V P +K + + +T M GDG ND AL QA VG+A
Sbjct: 185 DYFAEVLPHEKAEKVKEVQQ-KYVTAMVGDGVNDAPALAQADVGIA 229
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 43.2 bits (103), Expect = 2e-04
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHI 713
IR +S + +S+LK M+TGD A +VA ++ +
Sbjct: 144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGL 183
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 6e-06
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 781 KVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVA 826
KV A + PE K I++ K G + M GDG ND AL +A +G+A
Sbjct: 595 KVVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIA 640
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 2e-04
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHI 713
PI+ + + + EL+ S ++ M+TGD TA VA + I
Sbjct: 554 PIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGI 593
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 1e-05
Identities = 25/119 (21%), Positives = 58/119 (48%), Gaps = 26/119 (21%)
Query: 219 WYYSLFTLFMLFM-----FESTM-------------AKSRLKTLTEIRR-VRVDNQTIMV 259
+ S+ + + +E+++ A+++ +T I++ V + +T +V
Sbjct: 156 FLASVLSTAGVLPREYSFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVV 215
Query: 260 HRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTP 318
R GK + + ++ GD+V + R GE +P D +++ G + V+E++++GE P
Sbjct: 216 IRDGKEIAVPVEEVAVGDIVIV-RP----GE--KIPVDGVVVEGESYVDESMISGEPVP 267
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 6e-05
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 781 KVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVA 826
V A V P QK + +A + GDG ND AL QA +G+A
Sbjct: 576 LVIAEVLPHQKSEEVKKLQA-KEVVAFVGDGINDAPALAQADLGIA 620
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 44.0 bits (105), Expect = 2e-04
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHI 713
++E + + ELK + MITGD +A ++ ++++
Sbjct: 535 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL 574
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 46.3 bits (111), Expect = 2e-05
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 781 KVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVA 826
V A V P QK + +A + GDG ND AL QA +G+A
Sbjct: 204 LVIAEVLPHQKSEEVKKLQA-KEVVAFVGDGINDAPALAQADLGIA 248
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 44.0 bits (105), Expect = 1e-04
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHI 713
++E + + ELK + MITGD +A ++ ++++
Sbjct: 163 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL 202
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 1e-04
Identities = 26/120 (21%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 219 WYYSLFTLFMLFM-----FESTM-------------AKSRLKTLTEIRRVRVDNQ--TIM 258
+ S+ + + +E+++ A+++ +T I+++ V Q T +
Sbjct: 78 FLASVLSTAGVLPREYSFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKL-VGLQAKTAV 136
Query: 259 VHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTP 318
V R GK + + ++ GD+V + R GE +P D +++ G + V+E++++GE P
Sbjct: 137 VIRDGKEIAVPVEEVAVGDIVIV-RP----GE--KIPVDGVVVEGESYVDESMISGEPVP 189
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 44.4 bits (106), Expect = 1e-04
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 781 KVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVA 826
V A V P QK + +A + GDG ND AL QA +G+A
Sbjct: 498 LVIAEVLPHQKSEEVKKLQA-KEVVAFVGDGINDAPALAQADLGIA 542
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 3e-04
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHI 713
++E + + ELK + MITGD +A ++ ++++
Sbjct: 457 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL 496
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 39.0 bits (92), Expect = 9e-04
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 255 QTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTG 314
+T +V R GK + + ++ GD+V + R GE +P D +++ G + V+E++++G
Sbjct: 12 KTAVVIRDGKEIAVPVEEVAVGDIVIV-RP----GE--KIPVDGVVVEGESYVDESMISG 64
Query: 315 ESTP 318
E P
Sbjct: 65 EPVP 68
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 853 | |||
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.88 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.92 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.91 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.9 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.82 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.78 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.7 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.81 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.79 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 98.76 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 98.68 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 98.66 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 98.65 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.62 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.61 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 98.59 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.48 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.39 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.38 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.35 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.31 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.26 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.24 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.23 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.23 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.23 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.21 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.2 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.2 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.18 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.16 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.13 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.04 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.04 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.01 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.01 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 97.98 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.94 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 97.91 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 97.91 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 97.89 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 97.89 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 97.89 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 97.87 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 97.84 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 97.77 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 97.77 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 97.77 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 97.74 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.72 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 97.66 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 97.65 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.63 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 97.62 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 97.61 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 97.61 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 97.57 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 97.57 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 97.56 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 97.56 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 97.54 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 97.5 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.48 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.46 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.45 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.44 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.44 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 97.4 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.39 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 97.39 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.37 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 97.3 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.3 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.29 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.29 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 97.27 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.25 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.23 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 97.19 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 97.18 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.15 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.11 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.1 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.09 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.08 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.03 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 97.02 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.01 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 96.99 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 96.98 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 96.97 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 96.94 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 96.93 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 96.93 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 96.83 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.83 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 96.78 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 96.78 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 96.73 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 96.71 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.7 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 96.69 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 96.64 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 96.63 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 96.63 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 96.62 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 96.35 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 96.27 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.1 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 96.08 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 96.06 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 95.93 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 95.81 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 95.78 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 95.61 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 95.23 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 95.22 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 95.19 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 94.95 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 94.65 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 94.59 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 94.56 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 94.4 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 94.37 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 94.26 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 94.1 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 93.85 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 93.76 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 93.69 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 93.12 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 93.11 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 92.87 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 92.77 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 92.52 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 92.32 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 91.73 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 90.83 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 90.16 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 88.5 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 87.91 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 84.3 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 82.32 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 80.82 |
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-96 Score=911.84 Aligned_cols=650 Identities=22% Similarity=0.271 Sum_probs=503.6
Q ss_pred CCCccccccccc--cCCCCcHHHHHHHHHhcCCcccccC-CccHHHHHHHHhhchhHHHHHhhhhh----hcch------
Q 003049 150 YPTKETFGYYLK--CTGHSTEAKIAVATEKWGRNVFEYP-QPTFQKLMKENCMEPFFVFQVFCVGL----WCLD------ 216 (853)
Q Consensus 150 ~~~~~~~~~~~~--~~GLs~~~~~~~~~~~yG~N~~~~~-~~~~~~l~~~~~~~pf~vf~i~~~~l----w~~~------ 216 (853)
.+.++.++.+.. .+|||++ |+++|+++||+|+++.+ .+++|.+|++++.+||.++++++.++ |.++
T Consensus 51 ~~~~~~~~~l~t~~~~GLs~~-e~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~ 129 (1028)
T 2zxe_A 51 LSLDELHNKYGTDLTRGLTNA-RAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDE 129 (1028)
T ss_dssp SCHHHHHHHHTCCSSSCBCHH-HHHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred CCHHHHHHHhCcCccCCCCHH-HHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 445556667764 4799987 99999999999999987 46899999999999998877665443 3332
Q ss_pred ---hhHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHhhhcCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCC
Q 003049 217 ---EYWYYSLFTLFMLFMFESTMAKSRLK---TLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGE 290 (853)
Q Consensus 217 ---~y~~~s~~~l~~lv~~~~~~~~~~~k---~~~~l~~m~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~ 290 (853)
++|++++++++++++......+|++| ++++|++| .|.+++|+|||+|++|++++|+|||+|.|++|+
T Consensus 130 ~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l--~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd----- 202 (1028)
T 2zxe_A 130 PANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNM--VPQQALVIRDGEKSTINAEFVVAGDLVEVKGGD----- 202 (1028)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTT--SCSEEEEEETTEEEEEEGGGCCTTCEEEEETTC-----
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCCeeEEEECCEEEEEEHHHCCcCCEEEECCCC-----
Confidence 35667776666666666666777655 45556555 457899999999999999999999999999988
Q ss_pred Cceeecceeeecce-eEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEE
Q 003049 291 DKSVPADMLILGGS-AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLA 369 (853)
Q Consensus 291 ~~~vPaD~ill~G~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~ 369 (853)
.|||||+|++|+ |.||||+|||||.|+.|.+.+..+ .. .++.|++|+||.|. +|.+.+
T Consensus 203 --~IPaD~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~--~~----~~~~n~v~~GT~v~-------------~G~~~~ 261 (1028)
T 2zxe_A 203 --RIPADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSE--NP----LETRNIAFFSTNCV-------------EGTARG 261 (1028)
T ss_dssp --BCCSEEEEEEEEEEEEECHHHHSCCSCEECCSSCCCS--ST----TTCSSEECTTCEEE-------------EEEEEE
T ss_pred --EeeceEEEEeeCcEEEEcCccCCCCcceecccCCCCC--Cc----ccccceEEeCceEE-------------cceEEE
Confidence 999999999995 899999999999999998743211 11 25688999999999 589999
Q ss_pred EEEeeCcccchhHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCCC
Q 003049 370 VVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPE 449 (853)
Q Consensus 370 ~V~~tG~~T~~g~l~r~i~~~~~~~~~~~~~~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~ 449 (853)
+|++||.+|..|++++++..+..+.++.++....|+.+++.++++.++.++..+... +.++...+..++.+++++|||+
T Consensus 262 ~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~i~llv~~iP~~ 340 (1028)
T 2zxe_A 262 VVVYTGDRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLIL-GYSWLEAVIFLIGIIVANVPEG 340 (1028)
T ss_dssp EEEECGGGSHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHSCTT
T ss_pred EEEEeccccHHHHHHHhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cCcHHHHHHHHHHHHHHHcCch
Confidence 999999999999999999888888888888888887776666554443332222111 2346667777888888999999
Q ss_pred chHHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCC---cc-cc----ccCCCC
Q 003049 450 LPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNA---EL-ED----DMTKVP 521 (853)
Q Consensus 450 Lp~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~---~~-~~----~~~~~~ 521 (853)
||++++++...+..+|+|++++|+++.++|.+|++|++|||||||||+|+|+|.+++..+.. .. .. .....+
T Consensus 341 Lp~~vti~l~~~~~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (1028)
T 2zxe_A 341 LLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTS 420 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSC
T ss_pred HHHHHHHHHHHHHHHHhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCC
Confidence 99999999999999999999999999999999999999999999999999999998753210 00 00 000111
Q ss_pred H---HHHHHHHHhccceeeC---------CcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCce
Q 003049 522 V---RTQEILASCHALVFVD---------NKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRM 589 (853)
Q Consensus 522 ~---~~~~~la~chsl~~~~---------~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krm 589 (853)
. ....+.+.||+..... ....|||+|.|+++++.+....... ....+++++++||+|++|||
T Consensus 421 ~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~------~~~~~~~~~~~pF~s~rk~m 494 (1028)
T 2zxe_A 421 ATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQG------MRDRNPKIVEIPFNSTNKYQ 494 (1028)
T ss_dssp HHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHH------HHHHSCEEEEECCCTTTCEE
T ss_pred HHHHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHH------HHHhCceEEEeccCcccceE
Confidence 2 3456678898765432 1357999999999987543111000 01346788999999999999
Q ss_pred EEEEEe----CCEEEEEEcCcHHHHHHhhccC-------------ChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhh
Q 003049 590 SVVVRV----QEEFFAFVKGAPETIQDRLTDL-------------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDAR 652 (853)
Q Consensus 590 svi~~~----~~~~~~~~KGapE~i~~~~~~i-------------p~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~ 652 (853)
+++++. ++++++++|||||.|.++|... ++.+.+.+++|+++|+||+++|||.++...+.+..
T Consensus 495 svi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~ 574 (1028)
T 2zxe_A 495 LSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGY 574 (1028)
T ss_dssp EEEEECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTC
T ss_pred EEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCcccccccc
Confidence 999986 3568899999999999999642 23567788999999999999999998753322111
Q ss_pred hhc---HHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCce
Q 003049 653 SLH---RDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKV 729 (853)
Q Consensus 653 ~~~---r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~ 729 (853)
..+ .+..|+||+|+|+++++||+|||++++|++|+++||+++|+|||++.||.++|++|||...+...+..
T Consensus 575 ~~~~~~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~------ 648 (1028)
T 2zxe_A 575 PFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIED------ 648 (1028)
T ss_dssp CCCTTTTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHH------
T ss_pred ccchhhhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHH------
Confidence 112 23458999999999999999999999999999999999999999999999999999998432100000
Q ss_pred eEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccc--eEEEeeChhhHHHHHHHHHHcCCEEEE
Q 003049 730 YEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYV--KVFARVAPEQKELILTTFKAVGRMTLM 807 (853)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~--~VfAr~sP~qK~~iV~~Lq~~g~~v~m 807 (853)
..+....++.. ......+..+++|+.++.+.+ +++.+++.++ .||||++|+||..+|+.+|+.|+.|+|
T Consensus 649 -----~~~~~~~~~~~---~~~~~~~~~vi~G~~l~~~~~-~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~ 719 (1028)
T 2zxe_A 649 -----IAARLNIPIGQ---VNPRDAKACVVHGSDLKDLST-EVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAV 719 (1028)
T ss_dssp -----HHHHTTCCGGG---SCGGGCCEEEEEHHHHTTCCH-HHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEE
T ss_pred -----HHhhcCcchhh---ccccccceEEEEcHHhhhCCH-HHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEE
Confidence 00000000000 001123467999999887754 5566666665 499999999999999999999999999
Q ss_pred EcCCcccHHHHHhCCceEEec-cCCCcCcccccccccccccCCccC
Q 003049 808 CGDGTNDVGALKQAHVGVALL-NAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 808 ~GDG~ND~~ALk~AdVGIAl~-~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
+|||+||+||||+|||||||+ +|++. +++++|.++.+++|.+|
T Consensus 720 iGDG~ND~paLk~AdvGIAmg~~gtd~--ak~aAD~Vl~~~~~~~I 763 (1028)
T 2zxe_A 720 TGDGVNDSPALKKADIGVAMGISGSDV--SKQAADMILLDDNFASI 763 (1028)
T ss_dssp EECSGGGHHHHHHSSEEEEESSSCCHH--HHHHCSEEETTCCTHHH
T ss_pred EcCCcchHHHHHhCCceEEeCCccCHH--HHHhcCEEecCCCHHHH
Confidence 999999999999999999999 69886 67788888888888653
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-94 Score=896.31 Aligned_cols=652 Identities=21% Similarity=0.264 Sum_probs=506.2
Q ss_pred CCCccccccccc--cCCCCcHHHHHHHHHhcCCcccccCC-ccHHHHHHHHhhchhHHHHHhhhhhhcc-----------
Q 003049 150 YPTKETFGYYLK--CTGHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGLWCL----------- 215 (853)
Q Consensus 150 ~~~~~~~~~~~~--~~GLs~~~~~~~~~~~yG~N~~~~~~-~~~~~l~~~~~~~pf~vf~i~~~~lw~~----------- 215 (853)
.+.++.++.+.. .+|||++ |+++|+++||+|+++.++ +++|..|.+++.+||.++++++.++.++
T Consensus 56 ~~~~~~~~~l~~~~~~GLs~~-ea~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~ 134 (1034)
T 3ixz_A 56 LSVAELEQKYQTSATKGLSAS-LAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDL 134 (1034)
T ss_pred CCHHHHHHHhCCCcccCCCHH-HHHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHhhccCCC
Confidence 455666777775 3799997 999999999999998765 4899999999999998777655443321
Q ss_pred --hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCc
Q 003049 216 --DEYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRVR-VDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDK 292 (853)
Q Consensus 216 --~~y~~~s~~~l~~lv~~~~~~~~~~~k~~~~l~~m~-~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~ 292 (853)
.++|++++++++++++......+|+.|+.+.++++. ..|.+++|+|||++++|++++|||||+|.|++|+
T Consensus 135 ~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd------- 207 (1034)
T 3ixz_A 135 TTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGD------- 207 (1034)
T ss_pred ccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCcEEEEcCCc-------
Confidence 134666776666666666677788777666655542 3457899999999999999999999999999988
Q ss_pred eeecceeeecce-eEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEE
Q 003049 293 SVPADMLILGGS-AIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVV 371 (853)
Q Consensus 293 ~vPaD~ill~G~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V 371 (853)
.|||||+|++|+ +.||||+|||||.|+.|.+.+.. +. ..+++|++|+||.|. +|.+.++|
T Consensus 208 ~VPAD~~ll~~~~l~VdES~LTGES~pv~K~~~~~~--~~----~~~~~n~~f~GT~v~-------------~G~~~~vV 268 (1034)
T 3ixz_A 208 RVPADIRILQAQGRKVDNSSLTGESEPQTRSPECTH--ES----PLETRNIAFFSTMCL-------------EGTAQGLV 268 (1034)
T ss_pred eecCCeEEEEeCCceEEecccCCCCCCeeccCCCcc--cc----ccccccceecceeEE-------------eecceEEE
Confidence 999999999986 78999999999999999863311 11 114678999999999 68999999
Q ss_pred EeeCcccchhHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCch
Q 003049 372 LRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELP 451 (853)
Q Consensus 372 ~~tG~~T~~g~l~r~i~~~~~~~~~~~~~~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp 451 (853)
++||.+|..|++.+.+....+..++.++....|...+..++++.+..++..+... +.++...++.++.+++++|||+||
T Consensus 269 v~tG~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~l~v~~iPe~Lp 347 (1034)
T 3ixz_A 269 VNTGDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCI-GYTFLRAMVFFMAIVVAYVPEGLL 347 (1034)
T ss_pred EeehhhhHhhHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHheeccccH
Confidence 9999999999999998887777888888777777666555554433332222211 345677888899999999999999
Q ss_pred HHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccc---c-----ccCCCC--
Q 003049 452 MELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELE---D-----DMTKVP-- 521 (853)
Q Consensus 452 ~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~---~-----~~~~~~-- 521 (853)
++++++.+.+..+|+|++++|+++.++|.+|++|++|||||||||+|+|+|.+++..+..... . ......
T Consensus 348 ~~vti~la~~~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (1034)
T 3ixz_A 348 ATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSET 427 (1034)
T ss_pred HHHHHHHHHHHHHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHH
Confidence 999999999999999999999999999999999999999999999999999998754321000 0 000011
Q ss_pred -HHHHHHHHHhccceeeC---------CcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEE
Q 003049 522 -VRTQEILASCHALVFVD---------NKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSV 591 (853)
Q Consensus 522 -~~~~~~la~chsl~~~~---------~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsv 591 (853)
.....+++.||...... ....|||.|.|++++..+...... .....+++++.+||+|++|||++
T Consensus 428 ~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~------~~~~~~~~~~~~pF~s~rk~m~~ 501 (1034)
T 3ixz_A 428 WRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAM------GYRERFPKVCEIPFNSTNKFQLS 501 (1034)
T ss_pred HHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChH------HHHHhCcceEEeeecCCCceEEE
Confidence 23456778898765432 236799999999998764321111 11245678899999999999998
Q ss_pred EEEeC----CEEEEEEcCcHHHHHHhhccC-------C------hhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhh
Q 003049 592 VVRVQ----EEFFAFVKGAPETIQDRLTDL-------P------SSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSL 654 (853)
Q Consensus 592 i~~~~----~~~~~~~KGapE~i~~~~~~i-------p------~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~ 654 (853)
++... +++++++|||||.|+++|..+ | +.+.+.+++|+++|+||||+|||.++..+..+....
T Consensus 502 v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~ 581 (1034)
T 3ixz_A 502 IHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAF 581 (1034)
T ss_pred EEEecCCCCccEEEEEeCChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhccccccc
Confidence 88752 468999999999999999642 1 346778899999999999999999875432222222
Q ss_pred ---cHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeE
Q 003049 655 ---HRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYE 731 (853)
Q Consensus 655 ---~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~ 731 (853)
..+..|+||+|+|+++++||+|++++++|++|+++||+|+|+|||++.||.++|+++||..+....+..
T Consensus 582 ~~~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~-------- 653 (1034)
T 3ixz_A 582 DVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVED-------- 653 (1034)
T ss_pred chhhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHH--------
Confidence 233568999999999999999999999999999999999999999999999999999997532110000
Q ss_pred eecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccc--eEEEeeChhhHHHHHHHHHHcCCEEEEEc
Q 003049 732 WVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYV--KVFARVAPEQKELILTTFKAVGRMTLMCG 809 (853)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~--~VfAr~sP~qK~~iV~~Lq~~g~~v~m~G 809 (853)
..+....+.. .......+..+++|..++.+.+ +++.+.+.+. .||||++|+||.++|+.+|+.|++|+|+|
T Consensus 654 ---~~~~~~~~~~---~~~~~~~~~~~~~g~~l~~~~~-~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~G 726 (1034)
T 3ixz_A 654 ---IAARLRVPVD---QVNRKDARACVINGMQLKDMDP-SELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTG 726 (1034)
T ss_pred ---HHHhhCccch---hccccccceeEEecHhhhhCCH-HHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEEC
Confidence 0000000000 0011223567899999887765 4555555543 59999999999999999999999999999
Q ss_pred CCcccHHHHHhCCceEEec-cCCCcCcccccccccccccCCccC
Q 003049 810 DGTNDVGALKQAHVGVALL-NAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 810 DG~ND~~ALk~AdVGIAl~-~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
||.||++|||+|||||||+ +|+++ +++++|.++.+++|.+|
T Consensus 727 DG~ND~~mLk~A~vGIAMg~ng~d~--aK~aAD~Vl~~~~~~gI 768 (1034)
T 3ixz_A 727 DGVNDSPALKKADIGVAMGIAGSDA--AKNAADMILLDDNFASI 768 (1034)
T ss_pred CcHHhHHHHHHCCeeEEeCCccCHH--HHHhcCEEeccCCchHH
Confidence 9999999999999999999 89986 77788899888888654
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-95 Score=882.11 Aligned_cols=578 Identities=20% Similarity=0.253 Sum_probs=461.2
Q ss_pred cCCCCcHHHHHHHHHhcCCcccccCCccHHHHHHHHhhchh-HHHHHhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 003049 162 CTGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCMEPF-FVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSR 240 (853)
Q Consensus 162 ~~GLs~~~~~~~~~~~yG~N~~~~~~~~~~~l~~~~~~~pf-~vf~i~~~~lw~~~~y~~~s~~~l~~lv~~~~~~~~~~ 240 (853)
.+||+++ |+++|+++||+|+++.++++++..|.+++.+|+ +++++++++.|++++|++++ ++++++++......+|+
T Consensus 85 ~~GLs~~-ea~~r~~~~G~N~l~~~~~~~~~~~l~~f~~~~~~ll~~aai~s~~~g~~~~~~-~i~~vv~i~~~i~~~qe 162 (920)
T 1mhs_A 85 RVGLTSE-EVVQRRRKYGLNQMKEEKENHFLKFLGFFVGPIQFVMEGAAVLAAGLEDWVDFG-VICGLLLLNAVVGFVQE 162 (920)
T ss_dssp CCCCCSH-HHHHHHHHTSSSSCCCCCCSSHHHHTHHHHHHHHHHHHHHHHHCTTCSCSSHHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCCCHH-HHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHHHHHHHH
Confidence 4799997 999999999999999888889999999999998 56677777888887766554 34444455555566777
Q ss_pred HHHHHHHHhhh-cCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeecce--eEEeeccCCCCcc
Q 003049 241 LKTLTEIRRVR-VDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGS--AIVNEAILTGEST 317 (853)
Q Consensus 241 ~k~~~~l~~m~-~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G~--~~VdES~LTGES~ 317 (853)
+|+.+.++++. ..|.+++|+|||+|++|++++|+|||+|.|++|+ .|||||+|++|+ +.||||+|||||.
T Consensus 163 ~~a~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd-------~VPaDg~ll~g~~~l~VDES~LTGES~ 235 (920)
T 1mhs_A 163 FQAGSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGT-------IIPADGRIVTDDAFLQVDQSALTGESL 235 (920)
T ss_dssp HHHHHHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTC-------BCSSEEEEEEESSCCEEBCTTTSSCCC
T ss_pred HHHHHHHHHhhccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCC-------ccccceEEEecCceeeeeccccCCCCc
Confidence 77666666543 3456899999999999999999999999999988 999999999997 5999999999999
Q ss_pred ccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHHHHHhccccccCCcc
Q 003049 318 PQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTAN 397 (853)
Q Consensus 318 Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l~r~i~~~~~~~~~~ 397 (853)
|+.|.+ ++.+|+||.+. +|.+.++|++||.+|..|++.+.+.....+.++.
T Consensus 236 PV~K~~----------------gd~v~sGT~v~-------------~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l 286 (920)
T 1mhs_A 236 AVDKHK----------------GDQVFASSAVK-------------RGEAFVVITATGDNTFVGRAAALVNAASGGSGHF 286 (920)
T ss_dssp CEECCS----------------SCEECSCBCCS-------------CCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHH
T ss_pred ceEecC----------------CCeeecCceEe-------------cceEEEEEEEeCCcCHHHHHHHHHhhcccCCchH
Confidence 999975 67899999998 6999999999999999999998887666666666
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCchHHHHHHHHHHHHHHHhcceeccCCCC
Q 003049 398 SWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFR 477 (853)
Q Consensus 398 ~~~~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~ 477 (853)
++....+..++++++++.+..+|..++.. +.++...+..++.+++++|||+||+++++++..+..+|+|+|++++++.+
T Consensus 287 ~~~~~~i~~~l~~~~~~~~~i~~~~~~~~-~~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~a 365 (920)
T 1mhs_A 287 TEVLNGIGTILLILVIFTLLIVWVSSFYR-SNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSA 365 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTTT-TCCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCeEEecCch
Confidence 65554444444333333333333332222 33566778888888899999999999999999999999999999999999
Q ss_pred cccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHhccceeeCCcccCCHHHHHHHhhcCce
Q 003049 478 IPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWS 557 (853)
Q Consensus 478 i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~a~l~~~~~~ 557 (853)
+|.+|++|++|||||||||+|+|+|.+++..++. .+.+.....+.|+.. .+ ..+||+|.|+++++...
T Consensus 366 iE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g~--------~~~~ll~~a~l~~~~--~~--~~~~P~e~Al~~~~~~~ 433 (920)
T 1mhs_A 366 IESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGV--------DPEDLMLTACLAASR--KK--KGIDAIDKAFLKSLKYY 433 (920)
T ss_dssp HHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSCC--------CCTHHHHHHHHSCCC--SS--CSCCSHHHHHHHHHHHS
T ss_pred hhhhccCcEEEECCCCCccccceeEEEEeecCCC--------CHHHHHHHHHHhcCC--cc--cCCChHHHHHHHHHHhc
Confidence 9999999999999999999999999988754321 112222233334321 11 11599999999876422
Q ss_pred eccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEe-CCEEEEEEcCcHHHHHHhhcc---CC----hhHHHHHHHHH
Q 003049 558 YKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRV-QEEFFAFVKGAPETIQDRLTD---LP----SSYIETYKKYT 629 (853)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~-~~~~~~~~KGapE~i~~~~~~---ip----~~~~~~~~~~~ 629 (853)
.... .....+++++.+||+|.+|||+++++. +++.++++|||||.+.++|.. ++ +.+.+..++|+
T Consensus 434 ~~~~-------~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a 506 (920)
T 1mhs_A 434 PRAK-------SVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFA 506 (920)
T ss_dssp SSCC-------GGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHH
T ss_pred ccch-------hhccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHH
Confidence 1100 011346788999999999999999975 456788999999999999964 34 34667788999
Q ss_pred hccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHH
Q 003049 630 HQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVAS 709 (853)
Q Consensus 630 ~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~ 709 (853)
++|+||+++|||.. |++|+|+|+++++||+|||++++|++|+++||+++|+||||+.||.+||+
T Consensus 507 ~~G~RvL~vA~~~~----------------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~ 570 (920)
T 1mhs_A 507 TRGFRSLGVARKRG----------------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSR 570 (920)
T ss_dssp TSSCCCCEECCCSS----------------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHH
T ss_pred hCCCEEEEEEEecc----------------ccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHH
Confidence 99999999999731 56899999999999999999999999999999999999999999999999
Q ss_pred HcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChh
Q 003049 710 QVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPE 789 (853)
Q Consensus 710 ~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~ 789 (853)
++||.... ++. ..++++|+ +.+. .+++.+.+.++.||||++|+
T Consensus 571 ~lGI~~~~---~~~-------------------------------~~~~~~g~--~~~~-~~el~~~~~~~~V~arv~P~ 613 (920)
T 1mhs_A 571 QLGLGTNI---YNA-------------------------------ERLGLGGG--GDMP-GSEVYDFVEAADGFAEVFPQ 613 (920)
T ss_dssp HHTSSCSC---CCS-------------------------------SSSSSCBC--CCGG-GGGGGTTTTTTSCEESCCST
T ss_pred HcCCCccc---cCc-------------------------------cceeecCc--ccCC-HHHHHHHHhhCeEEEEeCHH
Confidence 99996320 000 01122333 1122 24566778888999999999
Q ss_pred hHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccccCCccC
Q 003049 790 QKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 790 qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
||.++|+.||+.|+.|+|+|||+||+||||+|||||||++|++. +++++|.++.+++|.+|
T Consensus 614 ~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~--ak~aADiVl~~~~~~~I 674 (920)
T 1mhs_A 614 HKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDA--ARSAADIVFLAPGLGAI 674 (920)
T ss_dssp HHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEETTSCHH--HHHSSSEEESSCCSHHH
T ss_pred HHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccccccHH--HHHhcCeEEcCCCHHHH
Confidence 99999999999999999999999999999999999999988885 77888999999988654
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-91 Score=875.29 Aligned_cols=640 Identities=23% Similarity=0.285 Sum_probs=487.4
Q ss_pred CCCccccccccc--cCCCCcHHHHHHHHHhcCCcccccCC-ccHHHHHHHHhhchhHHHHHhh----hhhhcch------
Q 003049 150 YPTKETFGYYLK--CTGHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFC----VGLWCLD------ 216 (853)
Q Consensus 150 ~~~~~~~~~~~~--~~GLs~~~~~~~~~~~yG~N~~~~~~-~~~~~l~~~~~~~pf~vf~i~~----~~lw~~~------ 216 (853)
.+.++.++.++. .+|||++ |+++|+++||+|+++.++ ++++++|++++.+|+.++.+++ .++|+..
T Consensus 8 ~~~~~~~~~l~~~~~~GLs~~-e~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~ 86 (995)
T 3ar4_A 8 KSTEECLAYFGVSETTGLTPD-QVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGEETI 86 (995)
T ss_dssp SCHHHHHHHHTCCTTTCBCHH-HHHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGG
T ss_pred CCHHHHHHHhCCCcccCCCHH-HHHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 345566777774 4799987 999999999999999865 5899999999999987665444 3444433
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhhhcCCceEEEEECCE--EEEeecCCcCCCeEEEEcCCCCCCCCC
Q 003049 217 EYWYYSLFTLFMLFMFESTMAKSRLKT---LTEIRRVRVDNQTIMVHRCGK--WVKLAGTDLVPGDVVSIGRSSGQTGED 291 (853)
Q Consensus 217 ~y~~~s~~~l~~lv~~~~~~~~~~~k~---~~~l~~m~~~~~~v~V~R~g~--~~~I~s~~LvpGDiV~l~~g~~d~~~~ 291 (853)
..|+.++++++++++......+|+.|+ +++|+++ .|.+++|+|||+ +++|+++||+|||+|.|++|+
T Consensus 87 ~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~--~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd------ 158 (995)
T 3ar4_A 87 TAFVEPFVILLILIANAIVGVWQERNAENAIEALKEY--EPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGD------ 158 (995)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGG--SCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTC------
T ss_pred hhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHcc--CCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCC------
Confidence 145566666666666666677777764 5555544 467899999887 699999999999999999988
Q ss_pred ceeecceeeec---ceeEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEE
Q 003049 292 KSVPADMLILG---GSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCL 368 (853)
Q Consensus 292 ~~vPaD~ill~---G~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~ 368 (853)
.|||||+|++ |+|.||||+|||||.|+.|.+.+..+.+. ...+++|.+|+||.|. +|.+.
T Consensus 159 -~IPaD~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~---~~~~~~~~v~~GT~v~-------------~G~~~ 221 (995)
T 3ar4_A 159 -KVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRA---VNQDKKNMLFSGTNIA-------------AGKAL 221 (995)
T ss_dssp -BCCSEEEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTC---CGGGCTTEECTTCEEE-------------ECEEE
T ss_pred -cccccEEEEEEeeceEEEEcccccCCCcceeccccccCCccc---CcccccceEecCCEEE-------------cceEE
Confidence 9999999975 35799999999999999998754321111 1236789999999999 59999
Q ss_pred EEEEeeCcccchhHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHhhhhhhc---ccCC--Cchh----hHHHHHhh
Q 003049 369 AVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKG---MEDP--TRSK----YKLFLSCS 439 (853)
Q Consensus 369 ~~V~~tG~~T~~g~l~r~i~~~~~~~~~~~~~~~~fi~~ll~~ai~~~~~~~~~~---~~~~--~~~~----~~~~l~~~ 439 (853)
++|++||.+|..|++++++..+..+.++.++....|...+..++++.++.+|..+ ..++ +.++ ...+..++
T Consensus 222 ~~V~~tG~~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai 301 (995)
T 3ar4_A 222 GIVATTGVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAV 301 (995)
T ss_dssp EEEEECGGGSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHHHHHHHHHHHHH
T ss_pred EEEEEcCcchHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHH
Confidence 9999999999999999999887777787766655554433332222222222111 1111 1112 12355677
Q ss_pred eeeEeecCCCchHHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecC---CC-----
Q 003049 440 LIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLS---NA----- 511 (853)
Q Consensus 440 ~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~---~~----- 511 (853)
.+++++|||+||+++++++..+..+|+|++++|+++..+|.+|++|++|||||||||+|+|+|.+++..+ +.
T Consensus 302 ~l~v~aiP~~Lp~~vt~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~ 381 (995)
T 3ar4_A 302 ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLN 381 (995)
T ss_dssp HHHHHHSCTTHHHHHHHHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEE
T ss_pred HHHHHhcCcchHHHHHHHHHHHHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccc
Confidence 8888899999999999999999999999999999999999999999999999999999999999987532 10
Q ss_pred ------ccccccCC-----------CC---HHHHHHHHHhccceeeC----C--cccCCHHHHHHHhhcCce--eccC-c
Q 003049 512 ------ELEDDMTK-----------VP---VRTQEILASCHALVFVD----N--KLVGDPLEKAALKGIDWS--YKSD-E 562 (853)
Q Consensus 512 ------~~~~~~~~-----------~~---~~~~~~la~chsl~~~~----~--~~~gdple~a~l~~~~~~--~~~~-~ 562 (853)
....+..+ .. .....+++.||...... + +..|||+|.|++.++... +... .
T Consensus 382 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~ 461 (995)
T 3ar4_A 382 EFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVR 461 (995)
T ss_dssp EEEECCSSSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCT
T ss_pred eeeccCCCcCCccccccccccccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCcccccc
Confidence 00000000 00 12344667788764321 1 356999999998765211 1110 0
Q ss_pred ccccCC-------CCCcceEEEEEecCCCCCCceEEEEEeC-C-----EEEEEEcCcHHHHHHhhccC---------C--
Q 003049 563 KAMPKR-------GGGNAVQIVQRHHFASHLKRMSVVVRVQ-E-----EFFAFVKGAPETIQDRLTDL---------P-- 618 (853)
Q Consensus 563 ~~~~~~-------~~~~~~~i~~~~~F~s~~krmsvi~~~~-~-----~~~~~~KGapE~i~~~~~~i---------p-- 618 (853)
...+.. .....+++++++||+|++|||||+++.+ + +..+++|||||.|+++|... .
T Consensus 462 ~i~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~ 541 (995)
T 3ar4_A 462 NLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGP 541 (995)
T ss_dssp TSCTTTSTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHH
T ss_pred ccccccccccchhhhhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHH
Confidence 000000 0124689999999999999999999873 3 47899999999999999642 2
Q ss_pred --hhHHHHHHHH--HhccceEEEEEeeeCCCCChh--hhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCc
Q 003049 619 --SSYIETYKKY--THQGSRVLALAFKSLPDMTVS--DARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQD 692 (853)
Q Consensus 619 --~~~~~~~~~~--~~~G~rvlala~k~l~~~~~~--~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~ 692 (853)
+.+.+.+++| +++|+||+|+|||+++..... ......++.+|+||+|+|+++++||+||+++++|++|+++||+
T Consensus 542 ~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~ 621 (995)
T 3ar4_A 542 VKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIR 621 (995)
T ss_dssp HHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHhhhccceEEEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCE
Confidence 3466777889 999999999999998642110 0112346788999999999999999999999999999999999
Q ss_pred EEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchh
Q 003049 693 LAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSA 772 (853)
Q Consensus 693 v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~ 772 (853)
++|+|||++.||.++|+++||..... .-.+.+++|++++.+.+ ++
T Consensus 622 v~miTGD~~~ta~~ia~~lgi~~~~~----------------------------------~i~~~~~~g~~~~~l~~-~~ 666 (995)
T 3ar4_A 622 VIMITGDNKGTAIAICRRIGIFGENE----------------------------------EVADRAYTGREFDDLPL-AE 666 (995)
T ss_dssp EEEEESSCHHHHHHHHHHHTSSCTTC----------------------------------CCTTTEEEHHHHHTSCH-HH
T ss_pred EEEECCCCHHHHHHHHHHcCcCCCCC----------------------------------cccceEEEchhhhhCCH-HH
Confidence 99999999999999999999974310 00134789999888765 45
Q ss_pred HHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccccCCccC
Q 003049 773 VLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 773 ~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
+.+++.+..||||++|+||.++|+.||+.|+.|+|+|||+||+||||+|||||||++|+++ +++++|.++.+++|.++
T Consensus 667 ~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiamg~g~~~--ak~aAd~vl~~~~~~~i 744 (995)
T 3ar4_A 667 QREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAV--AKTASEMVLADDNFSTI 744 (995)
T ss_dssp HHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEETTSCHH--HHHTCSEEETTCCHHHH
T ss_pred HHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEeCCCCHH--HHHhCCEEECCCCHHHH
Confidence 6777788899999999999999999999999999999999999999999999999988885 77788999988887653
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-95 Score=888.84 Aligned_cols=592 Identities=23% Similarity=0.253 Sum_probs=464.3
Q ss_pred CCCccccccccc-cCCCCcHHHHHHHHHhcCCcccccCCccHHHHHHHHhhchhH-HHHHhhhhhhcch------hhHHH
Q 003049 150 YPTKETFGYYLK-CTGHSTEAKIAVATEKWGRNVFEYPQPTFQKLMKENCMEPFF-VFQVFCVGLWCLD------EYWYY 221 (853)
Q Consensus 150 ~~~~~~~~~~~~-~~GLs~~~~~~~~~~~yG~N~~~~~~~~~~~l~~~~~~~pf~-vf~i~~~~lw~~~------~y~~~ 221 (853)
.+.++.++.++. .+|||++ |+++|+++||+|+++.++++++..|.+++.+||. ++++++++.|++. .+|+.
T Consensus 17 ~~~~~~~~~l~~~~~GLs~~-e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~~~~~~~~~~ 95 (885)
T 3b8c_A 17 IPIEEVFQQLKCSREGLTTQ-EGEDRIQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQD 95 (885)
T ss_dssp SSTTCCTTTSSSCSSCSTHH-HHHHHSSSCCSCCTTTTCCCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCCTTSCSCCTT
T ss_pred CCHHHHHHHhCCCCCCCCHH-HHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHH
Confidence 456677777774 5799987 9999999999999998888888888999999995 5566666666664 13444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceee
Q 003049 222 SLFTLFMLFMFESTMAKSRLKTLTEIRRV-RVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLI 300 (853)
Q Consensus 222 s~~~l~~lv~~~~~~~~~~~k~~~~l~~m-~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~il 300 (853)
++.+++++++......+|++|+.+.++++ ...|.+++|+|||+|++|++++|+|||+|.|++|+ .|||||+|
T Consensus 96 ~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd-------~IPaDg~l 168 (885)
T 3b8c_A 96 FVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGD-------IIPADARL 168 (885)
T ss_dssp HHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSC-------CCSSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCC-------EEeeceEE
Confidence 54444444444444455665555555543 23456889999999999999999999999999988 99999999
Q ss_pred eccee-EEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccc
Q 003049 301 LGGSA-IVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETS 379 (853)
Q Consensus 301 l~G~~-~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~ 379 (853)
++|++ .||||+|||||.|+.|.+ ++.+|+||.|. +|.+.++|++||.+|.
T Consensus 169 l~g~~l~VdES~LTGES~Pv~K~~----------------g~~v~~GT~v~-------------~G~~~~~V~~tG~~T~ 219 (885)
T 3b8c_A 169 LEGDPLKVDQSALTGESLPVTKHP----------------GQEVFSGSTCK-------------QGEIEAVVIATGVHTF 219 (885)
T ss_dssp CCSSCBCCCCCSTTCCSSCCCBSS----------------CCCCCSCCCCC-------------SCCCCCBCCSCTTTTT
T ss_pred EEcCcccccccccCCCCcceEecC----------------CCccccCeEEe-------------eeEEEEEEEEcCcccH
Confidence 99975 899999999999999975 56899999998 6899999999999999
Q ss_pred hhHHHHHhccccccCCcchhhHHHHHHHHHH-HH--HHHHh-hhhhhcccCCCchhhHHHHHhheeeEeecCCCchHHHH
Q 003049 380 QGKLMRTILFSTERVTANSWESGLFILFLVV-FA--VIAAG-YVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPMELS 455 (853)
Q Consensus 380 ~g~l~r~i~~~~~~~~~~~~~~~~fi~~ll~-~a--i~~~~-~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp~~ls 455 (853)
.|++.+.+.. .++.++.++....+..+++. ++ +++.. ..|.. . +.++...+..++.+++++|||+||++++
T Consensus 220 ~g~i~~lv~~-~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~v~llv~aiP~aLp~~vt 294 (885)
T 3b8c_A 220 FGKAAHLVDS-TNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPI---Q-RRKYRDGIDNLLVLLIGGIPIAMPTVLS 294 (885)
T ss_dssp STTCCCSCCS-CSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTTTTTT---T-CSCSTTHHHHHHHHTTTTCCSSTTTHHH
T ss_pred HHHHHHHHhc-ccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---c-cCcHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 9999887654 44555555554444333211 11 11111 11111 1 2344566888899999999999999999
Q ss_pred HHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEE-ecCCCccccccCCCC-HHHHHHHHHhcc
Q 003049 456 IAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVV-GLSNAELEDDMTKVP-VRTQEILASCHA 533 (853)
Q Consensus 456 lav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~-~~~~~~~~~~~~~~~-~~~~~~la~chs 533 (853)
++++.+..+|+|+|++|+++.++|.+|++|++|||||||||+|+|+|.... .... ...+ .+.+...+.|+.
T Consensus 295 i~la~g~~r~ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~-------~~~~~~~ll~~aa~~~~ 367 (885)
T 3b8c_A 295 VTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFC-------KGVEKDQVLLFAAMASR 367 (885)
T ss_dssp HTTTHHHHHHTTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCCSSC-------SSTTHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEeccC-------CCCCHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999996321 1000 0112 233444556654
Q ss_pred ceeeCCcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEe-CCEEEEEEcCcHHHHHH
Q 003049 534 LVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRV-QEEFFAFVKGAPETIQD 612 (853)
Q Consensus 534 l~~~~~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~-~~~~~~~~KGapE~i~~ 612 (853)
. ..+||+|.|++++++.. . .....+++++.+||+|.+|||+++++. +++.++++|||||.+.+
T Consensus 368 ~------~~~~p~~~Al~~~~~~~---~-------~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~ 431 (885)
T 3b8c_A 368 V------ENQDAIDAAMVGMLADP---K-------EARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILE 431 (885)
T ss_dssp S------SSCCSHHHHHHHTTCCT---T-------CCCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSS
T ss_pred C------CCCCchHHHHHHHhhch---h-------hHhhcCceeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHH
Confidence 2 25899999999886421 0 011345677889999999999998875 56678899999999999
Q ss_pred hhc---cCChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhC
Q 003049 613 RLT---DLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNS 689 (853)
Q Consensus 613 ~~~---~ip~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~a 689 (853)
+|. ..++.+.+.+++|+++|+||+++|||.++.. .++..|+|++|+|+++++||+|||++++|++|+++
T Consensus 432 ~c~~~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~--------~~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~a 503 (885)
T 3b8c_A 432 LAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEK--------TKESPGAPWEFVGLLPLFDPPRHDSAETIRRALNL 503 (885)
T ss_dssp SSCCCSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSS--------SSSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHT
T ss_pred hccCchhhHHHHHHHHHHHHhCCCeEEEEEEeccccc--------cccccccCcEEEEEEEeecccchhHHHHHHHHHHc
Confidence 995 4577899999999999999999999988642 23467889999999999999999999999999999
Q ss_pred CCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhc
Q 003049 690 SQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQ 769 (853)
Q Consensus 690 gi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~ 769 (853)
||+++|+||||+.||.+||+++||..+.. + .-+++|.+++...+
T Consensus 504 GI~v~MiTGD~~~tA~~iA~~lGi~~~~~---~---------------------------------~~~l~g~~~~~~~~ 547 (885)
T 3b8c_A 504 GVNVKMITGDQLAIGKETGRRLGMGTNMY---P---------------------------------SSALLGTHKDANLA 547 (885)
T ss_dssp TCCCEEEESSCHHHHTHHHHTTTCTTCCS---T---------------------------------TSSCCBGGGGTTSC
T ss_pred CCcEEEEcCCChHHHHHHHHHhCCccccC---C---------------------------------cceeeccccccccc
Confidence 99999999999999999999999963200 0 00123444333122
Q ss_pred chhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccccCC
Q 003049 770 TSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENT 849 (853)
Q Consensus 770 ~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~~~ 849 (853)
..++.+++.++.||||++|+||.++|+.||+.|+.|+|+|||+||+||||+|||||||++|++. +++++|.++.+++|
T Consensus 548 ~~~l~~~~~~~~v~arv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~--ak~aADivl~~~~~ 625 (885)
T 3b8c_A 548 SIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDA--ARGASDIVLTEPGL 625 (885)
T ss_dssp CSCHHHHHHTSCCEECCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHHH--HGGGCSSCCSSCSH
T ss_pred hhHHHHHHhhCcEEEEECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeCCccHH--HHHhcceeeccCch
Confidence 2456677778899999999999999999999999999999999999999999999999988875 77788999999888
Q ss_pred ccC
Q 003049 850 KSV 852 (853)
Q Consensus 850 ~~~ 852 (853)
.+|
T Consensus 626 ~~I 628 (885)
T 3b8c_A 626 SVI 628 (885)
T ss_dssp HHH
T ss_pred hHH
Confidence 654
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-73 Score=683.34 Aligned_cols=472 Identities=21% Similarity=0.271 Sum_probs=387.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcCCceEEEEE-CCEEEEeecCCcCCCeEEEEcCCCCCCCCCcee
Q 003049 217 EYWYYSLFTLFMLFMFESTMAKSRLKTLTEIRRV-RVDNQTIMVHR-CGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSV 294 (853)
Q Consensus 217 ~y~~~s~~~l~~lv~~~~~~~~~~~k~~~~l~~m-~~~~~~v~V~R-~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~v 294 (853)
.||..+.++++++.+......+++.|+.+.++++ ...|.+++|+| ||++++|++++|+|||+|.|++|+ .|
T Consensus 186 ~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge-------~I 258 (736)
T 3rfu_A 186 VYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGE-------KI 258 (736)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSE-------EC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCC-------cc
Confidence 4666666666666677777777776666666654 45677888888 999999999999999999999988 99
Q ss_pred ecceeeecceeEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEee
Q 003049 295 PADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRT 374 (853)
Q Consensus 295 PaD~ill~G~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~t 374 (853)
||||+|++|++.||||+|||||.|+.|.+ ++.+|+||.+. +|.+.++|++|
T Consensus 259 PaDg~vl~G~~~VDES~LTGES~Pv~K~~----------------gd~v~~Gt~~~-------------~G~~~~~v~~~ 309 (736)
T 3rfu_A 259 PVDGEVQEGRSFVDESMVTGEPIPVAKEA----------------SAKVIGATINQ-------------TGSFVMKALHV 309 (736)
T ss_dssp CSCEEECSSCEEEECSSSTTCSSCEEECT----------------TCEECTTCEEE-------------SCCCCEEECCC
T ss_pred cccEEEEECceEeeecccCCccccEEecc----------------CCcCCCceEec-------------cceEEEEEEEe
Confidence 99999999999999999999999999976 67899999998 79999999999
Q ss_pred CcccchhHHHHHhccccccCCcc----hhhHHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCc
Q 003049 375 GFETSQGKLMRTILFSTERVTAN----SWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPEL 450 (853)
Q Consensus 375 G~~T~~g~l~r~i~~~~~~~~~~----~~~~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~L 450 (853)
|.+|..|++++.+..+..++++. ++.+.+|+.++++++++.+++|+..+. ...+...+..++.+++++|||+|
T Consensus 310 G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~---~~~~~~~l~~ai~vlviacPcaL 386 (736)
T 3rfu_A 310 GSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGP---QPALSYGLIAAVSVLIIACPCAL 386 (736)
T ss_dssp STTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCS---SSSTTHHHHHHHHHHHHHCCSTH
T ss_pred chhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CchHHHHHHHHHHhHHHhhhhHH
Confidence 99999999999988776655554 455566777777777776666555442 12345668888899999999999
Q ss_pred hHHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHH
Q 003049 451 PMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILAS 530 (853)
Q Consensus 451 p~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~ 530 (853)
|+++++++..+..+++|+||+|+++..+|.+|++|++|||||||||+|+|.|.++.. ++ ...+..+.+
T Consensus 387 ~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~~-~~---------~~~~~~l~~-- 454 (736)
T 3rfu_A 387 GLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVT-DD---------FVEDNALAL-- 454 (736)
T ss_dssp HHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEEE-SS---------SCHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEEe-cC---------CCHHHHHHH--
Confidence 999999999999999999999999999999999999999999999999999999982 22 112222222
Q ss_pred hccceeeCCcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEeCCEEEEEEcCcHHHH
Q 003049 531 CHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETI 610 (853)
Q Consensus 531 chsl~~~~~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~~~~~~~KGapE~i 610 (853)
++++. ..+.||+++|+++++... + +......+|++..++ ++....+++. +.+|+++.+
T Consensus 455 aa~le----~~s~hPla~Aiv~~a~~~---~------------~~~~~~~~f~~~~g~-gv~~~~~g~~--~~~G~~~~~ 512 (736)
T 3rfu_A 455 AAALE----HQSEHPLANAIVHAAKEK---G------------LSLGSVEAFEAPTGK-GVVGQVDGHH--VAIGNARLM 512 (736)
T ss_dssp HHHHH----HSSCCHHHHHHHHHHHTT---C------------CCCCCCSCCCCCTTT-EEEECSSSSC--EEEESHHHH
T ss_pred HHHHh----hcCCChHHHHHHHHHHhc---C------------CCccCcccccccCCc-eEEEEECCEE--EEEcCHHHH
Confidence 22222 346899999999886421 0 011112356666554 4444445542 446999999
Q ss_pred HHhhccCChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCC
Q 003049 611 QDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSS 690 (853)
Q Consensus 611 ~~~~~~ip~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~ag 690 (853)
.+..... +.+.+..++++++|+|++++|+ |.+++|+++++|++|++++++|++|+++|
T Consensus 513 ~~~~~~~-~~~~~~~~~~~~~G~~vl~va~---------------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~G 570 (736)
T 3rfu_A 513 QEHGGDN-APLFEKADELRGKGASVMFMAV---------------------DGKTVALLVVEDPIKSSTPETILELQQSG 570 (736)
T ss_dssp HHHCCCC-HHHHHHHHHHHHTTCEEEEEEE---------------------TTEEEEEEEEECCBCSSHHHHHHHHHHHT
T ss_pred HHcCCCh-hHHHHHHHHHHhcCCeEEEEEE---------------------CCEEEEEEEeeccchhhHHHHHHHHHHCC
Confidence 8776543 4567788999999999999998 56899999999999999999999999999
Q ss_pred CcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcc
Q 003049 691 QDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQT 770 (853)
Q Consensus 691 i~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~ 770 (853)
++++|+|||+..||.++|+++||.
T Consensus 571 i~v~mlTGd~~~~a~~ia~~lgi~-------------------------------------------------------- 594 (736)
T 3rfu_A 571 IEIVMLTGDSKRTAEAVAGTLGIK-------------------------------------------------------- 594 (736)
T ss_dssp CEEEEECSSCHHHHHHHHHHHTCC--------------------------------------------------------
T ss_pred CeEEEECCCCHHHHHHHHHHcCCC--------------------------------------------------------
Confidence 999999999999999999999996
Q ss_pred hhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccccCCc
Q 003049 771 SAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENTK 850 (853)
Q Consensus 771 ~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~~~~ 850 (853)
.+++|++|+||..+|+.||+.|+.|+|+|||.||+|||++|||||||++|++. +++.+|.++.++++.
T Consensus 595 ----------~v~a~~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~--a~~~AD~vl~~~~~~ 662 (736)
T 3rfu_A 595 ----------KVVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDV--AIESAGVTLLHGDLR 662 (736)
T ss_dssp ----------CEECSCCHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEESSSCSH--HHHHCSEEECSCCST
T ss_pred ----------EEEEecCHHHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeCCccHH--HHHhCCEEEccCCHH
Confidence 58999999999999999999999999999999999999999999999999986 777778888777765
Q ss_pred c
Q 003049 851 S 851 (853)
Q Consensus 851 ~ 851 (853)
.
T Consensus 663 ~ 663 (736)
T 3rfu_A 663 G 663 (736)
T ss_dssp T
T ss_pred H
Confidence 4
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-73 Score=674.59 Aligned_cols=482 Identities=21% Similarity=0.257 Sum_probs=385.3
Q ss_pred hHHHHHhhhhhhcchhhHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcCCceEEEEECCEEEEeecCCcCCCeE
Q 003049 202 FFVFQVFCVGLWCLDEYWYY--SLFTLFMLFMFESTMAKSRLKTLTEIRRV-RVDNQTIMVHRCGKWVKLAGTDLVPGDV 278 (853)
Q Consensus 202 f~vf~i~~~~lw~~~~y~~~--s~~~l~~lv~~~~~~~~~~~k~~~~l~~m-~~~~~~v~V~R~g~~~~I~s~~LvpGDi 278 (853)
.|++++++.+.|..++|+|| +.++++++.+......+++.|+.+.++++ ...|.+++|+|||+|++|+++||+|||+
T Consensus 77 a~~~s~~~~~~~~~~~~~~~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDi 156 (645)
T 3j08_A 77 AFLASVLSTAGVLPREYSFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDI 156 (645)
T ss_dssp HHHHHHHHHHHHCCSCSSCCCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCE
T ss_pred HHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCE
Confidence 45566777777776675443 44444555555555556655544444442 3457789999999999999999999999
Q ss_pred EEEcCCCCCCCCCceeecceeeecceeEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCC
Q 003049 279 VSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTF 358 (853)
Q Consensus 279 V~l~~g~~d~~~~~~vPaD~ill~G~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~ 358 (853)
|.|++|| .|||||+|++|++.||||+|||||.|+.|.+ ++.+|+||.+.
T Consensus 157 v~v~~Ge-------~IPaDg~vl~G~~~VdeS~LTGES~Pv~K~~----------------g~~v~~Gt~~~-------- 205 (645)
T 3j08_A 157 VIVRPGE-------KIPVDGVVVEGESYVDESMISGEPVPVLKSK----------------GDEVFGATINN-------- 205 (645)
T ss_dssp EEECTTC-------BCCSEEEEEECCEEEECHHHHCCSSCEEECT----------------TCEECTTCEEC--------
T ss_pred EEECCCC-------EEeeEEEEEECcEEEEcccccCCCCceecCC----------------CCEeeccEEEe--------
Confidence 9999988 9999999999999999999999999999975 67899999998
Q ss_pred CCCCCCCcEEEEEEeeCcccchhHHHHHhccccccCCcchhh----HHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHH
Q 003049 359 PLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWE----SGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKL 434 (853)
Q Consensus 359 ~~~~~~g~~~~~V~~tG~~T~~g~l~r~i~~~~~~~~~~~~~----~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~ 434 (853)
+|.+.+.|++||.+|..|++++.+..+..++++.++. +.+|+.++++++++++++++..+ +.++...
T Consensus 206 -----~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~----~~~~~~~ 276 (645)
T 3j08_A 206 -----TGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIA----HAPLLFA 276 (645)
T ss_dssp -----SSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCC----SCSCCCT
T ss_pred -----cCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCcHHHH
Confidence 7999999999999999999999998877666665444 44555555666666555544332 1223445
Q ss_pred HHHhheeeEeecCCCchHHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccc
Q 003049 435 FLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELE 514 (853)
Q Consensus 435 ~l~~~~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~ 514 (853)
+..++.+++++|||+||+++++++..++.+++|+|++|+++.++|.+|++|++|||||||||+|+|+|.++...+.+
T Consensus 277 ~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~--- 353 (645)
T 3j08_A 277 FTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD--- 353 (645)
T ss_dssp TTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESSSC---
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeCCCC---
Confidence 67788888889999999999999999999999999999999999999999999999999999999999999875321
Q ss_pred cccCCCCHHHHHHHHHhccceeeCCcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEE
Q 003049 515 DDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVR 594 (853)
Q Consensus 515 ~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~ 594 (853)
..+.+...++|. ..+.||+++|+++++... +... .... +|.+...+ ++..
T Consensus 354 ------~~~~l~~aa~~e-------~~s~hPla~Aiv~~a~~~---g~~~----~~~~--------~~~~~~g~-g~~~- 403 (645)
T 3j08_A 354 ------ERELLRLAAIAE-------RRSEHPIAEAIVKKALEH---GIEL----GEPE--------KVEVIAGE-GVVA- 403 (645)
T ss_dssp ------HHHHHHHHHHHH-------TTCCSHHHHHHHHHHHHT---TCCC----CSCC--------CCEEETTT-EEEE-
T ss_pred ------HHHHHHHHHHHh-------hcCCChhHHHHHHHHHhc---CCCc----CCcc--------ceEEecCC-ceEE-
Confidence 223334444443 346899999999876421 0000 0000 11111111 1111
Q ss_pred eCCEEEEEEcCcHHHHHHhhccCChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCC
Q 003049 595 VQEEFFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCP 674 (853)
Q Consensus 595 ~~~~~~~~~KGapE~i~~~~~~ip~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~ 674 (853)
..+.+|+++.+.+.....|+.+.+.+++++++|.|++++|+ |++|+|+++++|+
T Consensus 404 -----~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~va~---------------------~~~~~G~i~~~D~ 457 (645)
T 3j08_A 404 -----DGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVAR---------------------NGRVEGIIAVSDT 457 (645)
T ss_dssp -----TTEEEECHHHHHHTTCCCCHHHHHHHHHHHTTTCCCEEEEE---------------------TTEEEEEEEEECC
T ss_pred -----EEEEECCHHHHHhcCCCccHHHHHHHHHHHhcCCeEEEEEE---------------------CCEEEEEEEecCC
Confidence 12456999999888778888999999999999999999987 5789999999999
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCc
Q 003049 675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDA 754 (853)
Q Consensus 675 lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (853)
+||+++++|++|+++|++++|+|||+..+|.++|+++||.
T Consensus 458 l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~---------------------------------------- 497 (645)
T 3j08_A 458 LKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD---------------------------------------- 497 (645)
T ss_dssp CTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS----------------------------------------
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC----------------------------------------
Confidence 9999999999999999999999999999999999999996
Q ss_pred eeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcC
Q 003049 755 HDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPT 834 (853)
Q Consensus 755 ~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~ 834 (853)
.+|+|++|+||..+|+.||+. +.|+|+|||.||++||++|||||||++|++.
T Consensus 498 --------------------------~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~- 549 (645)
T 3j08_A 498 --------------------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDV- 549 (645)
T ss_dssp --------------------------EEECSCCTTCHHHHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEECCCSCC-
T ss_pred --------------------------EEEEeCCHHhHHHHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEeCCCcHH-
Confidence 689999999999999999998 8999999999999999999999999999886
Q ss_pred cccccccccccccCCcc
Q 003049 835 QSGNSSSEASKDENTKS 851 (853)
Q Consensus 835 ~~~~~~~~~~~~~~~~~ 851 (853)
+++.+|.++.++++..
T Consensus 550 -a~~~AD~vl~~~~~~~ 565 (645)
T 3j08_A 550 -AVESGDIVLIRDDLRD 565 (645)
T ss_dssp -SSCCSSSEESSCCTTH
T ss_pred -HHHhCCEEEecCCHHH
Confidence 6777778877776654
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-73 Score=681.29 Aligned_cols=482 Identities=21% Similarity=0.257 Sum_probs=386.0
Q ss_pred hHHHHHhhhhhhcchhhHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcCCceEEEEECCEEEEeecCCcCCCeE
Q 003049 202 FFVFQVFCVGLWCLDEYWYY--SLFTLFMLFMFESTMAKSRLKTLTEIRRV-RVDNQTIMVHRCGKWVKLAGTDLVPGDV 278 (853)
Q Consensus 202 f~vf~i~~~~lw~~~~y~~~--s~~~l~~lv~~~~~~~~~~~k~~~~l~~m-~~~~~~v~V~R~g~~~~I~s~~LvpGDi 278 (853)
.|++++++.+.|...+|+|| +.++++++.+......+++.|+.+.++++ ...|.+++|+|||+|++|++++|+|||+
T Consensus 155 a~~~s~~~~~~~~~~~~~~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDi 234 (723)
T 3j09_A 155 AFLASVLSTAGVLPREYSFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDI 234 (723)
T ss_dssp HHHHHHHHHHTTTTCCCCCCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCE
T ss_pred HHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCE
Confidence 35566666666766665343 44445555555556666665554444442 4457799999999999999999999999
Q ss_pred EEEcCCCCCCCCCceeecceeeecceeEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCC
Q 003049 279 VSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTF 358 (853)
Q Consensus 279 V~l~~g~~d~~~~~~vPaD~ill~G~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~ 358 (853)
|.|++|+ .|||||+|++|++.||||+|||||.|+.|.+ ++.+|+||.+.
T Consensus 235 v~v~~Ge-------~IPaDg~vl~G~~~VdeS~LTGES~pv~K~~----------------g~~v~~Gt~~~-------- 283 (723)
T 3j09_A 235 VIVRPGE-------KIPVDGVVVEGESYVDESMISGEPVPVLKSK----------------GDEVFGATINN-------- 283 (723)
T ss_dssp EEECTTC-------BCCSEEEEEECCEEEECHHHHCCSSCEEECT----------------TCEECTTCEEC--------
T ss_pred EEECCCC-------EEeeEEEEEECCeEEecccccCCCcceeecC----------------CCeeccceEEe--------
Confidence 9999988 9999999999999999999999999999975 67899999998
Q ss_pred CCCCCCCcEEEEEEeeCcccchhHHHHHhccccccCCcchhh----HHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHH
Q 003049 359 PLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWE----SGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKL 434 (853)
Q Consensus 359 ~~~~~~g~~~~~V~~tG~~T~~g~l~r~i~~~~~~~~~~~~~----~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~ 434 (853)
+|.+.++|++||.+|..|++++.+..+..++++.++. +.+|+.++++++++++++++..+ +.++...
T Consensus 284 -----~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~----~~~~~~~ 354 (723)
T 3j09_A 284 -----TGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIA----HAPLLFA 354 (723)
T ss_dssp -----SSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSST----TCTTCCS
T ss_pred -----cCcEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCcHHHH
Confidence 7999999999999999999999998777666665443 44555556666666555544332 2234455
Q ss_pred HHHhheeeEeecCCCchHHHHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccc
Q 003049 435 FLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELE 514 (853)
Q Consensus 435 ~l~~~~ii~~~vP~~Lp~~lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~ 514 (853)
+..++.+++++|||+||+++++++..++.+++|+||+|+++.++|.+|++|++|||||||||+|+|+|.++...+.+
T Consensus 355 ~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~--- 431 (723)
T 3j09_A 355 FTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD--- 431 (723)
T ss_dssp HHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSSC---
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeCCCC---
Confidence 77788888999999999999999999999999999999999999999999999999999999999999999875321
Q ss_pred cccCCCCHHHHHHHHHhccceeeCCcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEE
Q 003049 515 DDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVR 594 (853)
Q Consensus 515 ~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~ 594 (853)
..+.+...++|. ..+.||+++|+++++... +... .... +|.+...+ ++..
T Consensus 432 ------~~~~l~~aa~~e-------~~s~hP~~~Ai~~~a~~~---~~~~----~~~~--------~~~~~~g~-g~~~- 481 (723)
T 3j09_A 432 ------ERELLRLAAIAE-------RRSEHPIAEAIVKKALEH---GIEL----GEPE--------KVEVIAGE-GVVA- 481 (723)
T ss_dssp ------HHHHHHHHHHHH-------TTCCSHHHHHHHHHHHHT---TCCC----CSCC--------CCEEETTT-EEEE-
T ss_pred ------HHHHHHHHHHHh-------ccCCCchhHHHHHHHHhc---CCCc----CCcc--------ceEEecCC-ceEE-
Confidence 223333334332 346899999999876421 0000 0000 11111111 1111
Q ss_pred eCCEEEEEEcCcHHHHHHhhccCChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCC
Q 003049 595 VQEEFFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCP 674 (853)
Q Consensus 595 ~~~~~~~~~KGapE~i~~~~~~ip~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~ 674 (853)
..+.+|+++.+.+.....|+.+.+.+++++++|.|++++|+ |++|+|+++++|+
T Consensus 482 -----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~va~---------------------~~~~~G~i~i~D~ 535 (723)
T 3j09_A 482 -----DGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVAR---------------------NGRVEGIIAVSDT 535 (723)
T ss_dssp -----TTEEEECHHHHHHTTCCCCHHHHHHHHHHHTTTCEEEEEEE---------------------TTEEEEEEEEECC
T ss_pred -----EEEEECCHHHHHhcCCCccHHHHHHHHHHHhcCCeEEEEEE---------------------CCEEEEEEeecCC
Confidence 12456999999888777888999999999999999999987 5789999999999
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCc
Q 003049 675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDA 754 (853)
Q Consensus 675 lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (853)
+||+++++|++|+++|++++|+|||+..+|.++|+++||.
T Consensus 536 ~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~---------------------------------------- 575 (723)
T 3j09_A 536 LKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD---------------------------------------- 575 (723)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS----------------------------------------
T ss_pred cchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc----------------------------------------
Confidence 9999999999999999999999999999999999999996
Q ss_pred eeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcC
Q 003049 755 HDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPT 834 (853)
Q Consensus 755 ~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~ 834 (853)
.+|+|++|+||..+|+.||+. +.|+|+|||.||+|||++|||||||++|++.
T Consensus 576 --------------------------~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~- 627 (723)
T 3j09_A 576 --------------------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDV- 627 (723)
T ss_dssp --------------------------EEECSCCTTCHHHHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECCCCSCC-
T ss_pred --------------------------EEEccCCHHHHHHHHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEeCCCcHH-
Confidence 589999999999999999998 8999999999999999999999999999886
Q ss_pred cccccccccccccCCcc
Q 003049 835 QSGNSSSEASKDENTKS 851 (853)
Q Consensus 835 ~~~~~~~~~~~~~~~~~ 851 (853)
+++.+|.++.++++..
T Consensus 628 -a~~~AD~vl~~~~~~~ 643 (723)
T 3j09_A 628 -AVESGDIVLIRDDLRD 643 (723)
T ss_dssp -SSCCSSEECSSCCTTH
T ss_pred -HHHhCCEEEeCCCHHH
Confidence 7777888887777654
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-27 Score=255.32 Aligned_cols=240 Identities=22% Similarity=0.264 Sum_probs=168.3
Q ss_pred HHHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHhccceeeCC
Q 003049 460 TSLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDN 539 (853)
Q Consensus 460 ~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~ 539 (853)
.++.+++|+||+++++..+|.+++++++|||||||||+|++.+..+. +. .. ++..+.++.
T Consensus 4 ~a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~--~~-----------~~---~l~~~~~~e---- 63 (263)
T 2yj3_A 4 SLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI--GD-----------SL---SLAYAASVE---- 63 (263)
Confidence 46788999999999999999999999999999999999999998774 11 01 111122222
Q ss_pred cccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEeCCEEEEEEcCcHHHHHHhhccCCh
Q 003049 540 KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLTDLPS 619 (853)
Q Consensus 540 ~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~~~~~~~KGapE~i~~~~~~ip~ 619 (853)
..+.||+..|+.+++... . +.....-.|... ...++-....+ ..+.-|+++
T Consensus 64 ~~s~hp~a~ai~~~~~~~-g--------------~~~~~~~~~~~~-~G~g~~~~~~~--~~~~~G~~~----------- 114 (263)
T 2yj3_A 64 ALSSHPIAKAIVKYAKEQ-G--------------VKILEVKDFKEI-SGIGVRGKISD--KIIEVKKAE----------- 114 (263)
Confidence 345789999988765321 0 000000000000 00000000000 001112221
Q ss_pred hHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCC
Q 003049 620 SYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGD 699 (853)
Q Consensus 620 ~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGD 699 (853)
+|.+ +.+++ +-.+.|.+.+.++++|+++++|+.|++.|++++|+|||
T Consensus 115 -----------~~~~-~~~~~---------------------~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~ 161 (263)
T 2yj3_A 115 -----------NNND-IAVYI---------------------NGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGD 161 (263)
Confidence 2333 22222 34689999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhccc
Q 003049 700 QALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPY 779 (853)
Q Consensus 700 n~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~ 779 (853)
+..++..+++++||.
T Consensus 162 ~~~~~~~~~~~~gl~----------------------------------------------------------------- 176 (263)
T 2yj3_A 162 KEDKVKELSKELNIQ----------------------------------------------------------------- 176 (263)
Confidence 999999999999985
Q ss_pred ceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccccCC
Q 003049 780 VKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDENT 849 (853)
Q Consensus 780 ~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~~~ 849 (853)
.+|+.+.|++|..+++.|+..+..|+|+|||.||++|+++|++||+++++++. +....+.....+++
T Consensus 177 -~~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g~~~~~--~~~~ad~v~~~~~l 243 (263)
T 2yj3_A 177 -EYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMGNGVDI--SKNVADIILVSNDI 243 (263)
Confidence 35777779999999999999999999999999999999999999999987665 33445555533333
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-25 Score=205.90 Aligned_cols=109 Identities=23% Similarity=0.367 Sum_probs=99.6
Q ss_pred HHHHHHhhhcCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeecceeEEeeccCCCCccccccc
Q 003049 243 TLTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTGESTPQWKV 322 (853)
Q Consensus 243 ~~~~l~~m~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G~~~VdES~LTGES~Pv~K~ 322 (853)
++++|.++ .|..++|+|||+|++|++++|+|||+|.|++|+ .|||||+|++|.+.||||+|||||.|+.|.
T Consensus 2 al~~L~~l--~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~-------~iPaDg~v~~g~~~vdeS~LTGEs~pv~k~ 72 (113)
T 2hc8_A 2 AIKKLVGL--QAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGE-------KIPVDGVVVEGESYVDESMISGEPVPVLKS 72 (113)
T ss_dssp HHHHHHHH--SCSEEEEEETTEEEEEEGGGCCTTCEEEECTTC-------BCCSEEEEEECCEEEECHHHHCCSSCEEEC
T ss_pred HHHHHhcC--CCCEEEEEECCEEEEEEHHHCCCCCEEEECCCC-------EEeeeEEEEEceEEEEccccCCCCccEEEC
Confidence 34556554 567899999999999999999999999999988 999999999999999999999999999997
Q ss_pred cccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHHHHHhcc
Q 003049 323 SIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILF 389 (853)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l~r~i~~ 389 (853)
+ ++.+|+||.+. +|.+.++|++||.+|..|++++.+..
T Consensus 73 ~----------------g~~v~aGt~~~-------------~G~~~~~V~~~g~~T~~~~i~~lv~~ 110 (113)
T 2hc8_A 73 K----------------GDEVFGATINN-------------TGVLKIRATRVGGETLLAQIVKLVED 110 (113)
T ss_dssp T----------------TCEECTTCEEC-------------SSCEEEEEEECGGGSHHHHHHHHHHH
T ss_pred C----------------CCEEEeCCEEe-------------eceEEEEEEEecCcCHHHHHHHHHHH
Confidence 6 67899999998 79999999999999999999998754
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-24 Score=201.55 Aligned_cols=111 Identities=16% Similarity=0.292 Sum_probs=99.6
Q ss_pred HHHHHHHHhhhcCCceEEEEECCE------EEEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeecceeEEeeccCCC
Q 003049 241 LKTLTEIRRVRVDNQTIMVHRCGK------WVKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGGSAIVNEAILTG 314 (853)
Q Consensus 241 ~k~~~~l~~m~~~~~~v~V~R~g~------~~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G~~~VdES~LTG 314 (853)
.+++++|.+| .|..++|+|+|+ +++|++++|+|||+|.|++|+ .|||||+|++|.+.||||+|||
T Consensus 6 ~~~l~~L~~l--~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~-------~iPaDg~vi~g~~~vdeS~LTG 76 (124)
T 2kij_A 6 SEALAKLISL--QATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGG-------KFPVDGRVIEGHSMVDESLITG 76 (124)
T ss_dssp CCHHHHHHHT--CCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTC-------BCSSCEEECSCCCEEECTTTTC
T ss_pred HHHHHHHhcc--CCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCC-------EEEeeEEEEEccEEEEeccccC
Confidence 3456666555 567999999764 789999999999999999988 9999999999999999999999
Q ss_pred CccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHHHHHhcc
Q 003049 315 ESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILF 389 (853)
Q Consensus 315 ES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l~r~i~~ 389 (853)
||.|+.|.+ ++.+|+||.+. +|.+.++|++||.+|..|++++++..
T Consensus 77 Es~pv~k~~----------------g~~v~aGt~~~-------------~G~~~~~v~~~g~~T~~~~I~~lv~~ 122 (124)
T 2kij_A 77 EAMPVAKKP----------------GSTVIAGSINQ-------------NGSLLICATHVGADTTLSQIVKLVEE 122 (124)
T ss_dssp CSSCEECCT----------------TEEECTTCEEE-------------SSCCEEEECSCTTTCHHHHHHHHTTT
T ss_pred CCccEEeCC----------------CCEEEcCCEEe-------------eeEEEEEEEEecccCHHHHHHHHHHh
Confidence 999999975 78999999999 79999999999999999999998754
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-22 Score=218.61 Aligned_cols=255 Identities=24% Similarity=0.262 Sum_probs=190.6
Q ss_pred HHHHHHhcceeccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHhccceeeCCc
Q 003049 461 SLIALARRGIFCTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNK 540 (853)
Q Consensus 461 s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~ 540 (853)
+..+++|+||+++++..+|.+++++++|||||||||.+.+.+..+...++ +.. .++..|+++. .
T Consensus 9 ~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~----------~~~--~~l~~~~~~e----~ 72 (287)
T 3a1c_A 9 GSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG----------DER--ELLRLAAIAE----R 72 (287)
T ss_dssp -----CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS----------CHH--HHHHHHHHHT----T
T ss_pred hHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC----------CHH--HHHHHHHHHh----h
Confidence 45678999999999999999999999999999999999999998876532 112 2333444443 3
Q ss_pred ccCCHHHHHHHhhcCce-eccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEeCCEEEEEEcCcHHHHHHhhccCCh
Q 003049 541 LVGDPLEKAALKGIDWS-YKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLTDLPS 619 (853)
Q Consensus 541 ~~gdple~a~l~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~~~~~~~KGapE~i~~~~~~ip~ 619 (853)
...||++.|+.+++... +.... ...+ +.+. .+++.. . .+.+|+++.+.+....+|+
T Consensus 73 ~s~hp~~~a~~~~~~~~g~~~~~--------~~~~---~~~~------G~~~~~---~---~~~~g~~~~~~~~~~~~~~ 129 (287)
T 3a1c_A 73 RSEHPIAEAIVKKALEHGIELGE--------PEKV---EVIA------GEGVVA---D---GILVGNKRLMEDFGVAVSN 129 (287)
T ss_dssp TCCSHHHHHHHHHHHHTTCCCCC--------CSCE---EEET------TTEEEE---T---TEEEECHHHHHHTTCCCCH
T ss_pred cCCCHHHHHHHHHHHhcCCCccc--------cccc---eeec------CCCeEE---E---EEEECCHHHHHhcCCCccH
Confidence 56899999998765311 00000 0011 1110 111111 1 2345888777665555666
Q ss_pred hHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCC
Q 003049 620 SYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGD 699 (853)
Q Consensus 620 ~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGD 699 (853)
.+.+..+.+..+|.+++++++ |..+.|.+...++++|++.++|+.|++.|+++.++||+
T Consensus 130 ~~~~~~~~~~~~g~~~i~~~~---------------------d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~ 188 (287)
T 3a1c_A 130 EVELALEKLEREAKTAVIVAR---------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGD 188 (287)
T ss_dssp HHHHHHHHHHHTTCEEEEEEE---------------------TTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred HHHHHHHHHHhCCCeEEEEEE---------------------CCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCC
Confidence 777778889999999999987 34789999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhccc
Q 003049 700 QALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPY 779 (853)
Q Consensus 700 n~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~ 779 (853)
+...+..+++.+|+.
T Consensus 189 ~~~~~~~~l~~~gl~----------------------------------------------------------------- 203 (287)
T 3a1c_A 189 NWRSAEAISRELNLD----------------------------------------------------------------- 203 (287)
T ss_dssp CHHHHHHHHHHHTCS-----------------------------------------------------------------
T ss_pred CHHHHHHHHHHhCCc-----------------------------------------------------------------
Confidence 999999999999985
Q ss_pred ceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccc
Q 003049 780 VKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEAS 844 (853)
Q Consensus 780 ~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~ 844 (853)
.+|..+.|+.|...++.|+.. ..++|+||+.||+.|++.|++||+++++.+.. ....+...
T Consensus 204 -~~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~~~--~~~ad~v~ 264 (287)
T 3a1c_A 204 -LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVA--VESGDIVL 264 (287)
T ss_dssp -EEECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEECCCSCCS--SCCSSEEE
T ss_pred -eeeeecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEEeCCCCHHH--HhhCCEEE
Confidence 356667799999999999888 88999999999999999999999998765542 33344444
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=5.9e-19 Score=187.99 Aligned_cols=244 Identities=24% Similarity=0.265 Sum_probs=175.8
Q ss_pred ccCCCCcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHhccceeeCCcccCCHHHHHHH
Q 003049 472 CTEPFRIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAAL 551 (853)
Q Consensus 472 ~~~~~~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~a~l 551 (853)
++++..+|.+++++.+|||++||||.+++.|.++...++ ........++++. ....+|...++.
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~---------~~~~~~~~~~~~~-------~~s~~~~~~a~~ 64 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH---------SEDELLQIAASLE-------ARSEHPIAAAIV 64 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS---------CHHHHHHHHHHHH-------TTCCSHHHHHHH
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC---------CHHHHHHHHHHhh-------ccCCCHHHHHHH
Confidence 467888999999999999999999999999999987543 1223333444332 234577887777
Q ss_pred hhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEeCCEEEEEEcCcHHHHHHhhccCChhHHHHHHHHHhc
Q 003049 552 KGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQ 631 (853)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~~~~~~~KGapE~i~~~~~~ip~~~~~~~~~~~~~ 631 (853)
+.+... +.. ......++.++ ..++....++.. +..|+++.+.......++. ...+..+
T Consensus 65 ~~~~~~-g~~---------~~~~~~~~~~~------g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~----~~~~~~~ 122 (280)
T 3skx_A 65 EEAEKR-GFG---------LTEVEEFRAIP------GKGVEGIVNGRR--YMVVSPGYIRELGIKTDES----VEKLKQQ 122 (280)
T ss_dssp HHHHHT-TCC---------CCCCEEEEEET------TTEEEEEETTEE--EEEECHHHHHHTTCCCCTT----HHHHHTT
T ss_pred HHHHhc-CCC---------CCCccceeecC------CCEEEEEECCEE--EEEecHHHHHHcCCCchHH----HHHHHhC
Confidence 665311 000 00111222221 111222223332 2348888888776555533 4566788
Q ss_pred cceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHc
Q 003049 632 GSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQV 711 (853)
Q Consensus 632 G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~ 711 (853)
+.+++.+++ +..++|.+.+.++++|++.++++.|++.|+++.++||++...+..+++++
T Consensus 123 ~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~ 181 (280)
T 3skx_A 123 GKTVVFILK---------------------NGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEEL 181 (280)
T ss_dssp TCEEEEEEE---------------------TTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH
T ss_pred CCeEEEEEE---------------------CCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc
Confidence 888887765 44789999999999999999999999999999999999999999999999
Q ss_pred CcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhH
Q 003049 712 HIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQK 791 (853)
Q Consensus 712 gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK 791 (853)
|+. ..|..+.|.+|
T Consensus 182 gl~------------------------------------------------------------------~~f~~~~~~~k 195 (280)
T 3skx_A 182 GLD------------------------------------------------------------------DYFAEVLPHEK 195 (280)
T ss_dssp TCS------------------------------------------------------------------EEECSCCGGGH
T ss_pred CCh------------------------------------------------------------------hHhHhcCHHHH
Confidence 985 46778889999
Q ss_pred HHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCccccccc
Q 003049 792 ELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSS 841 (853)
Q Consensus 792 ~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~ 841 (853)
...++.+.+.. .++|+|||.||+.|+++|++||+|+++++..+...+.+
T Consensus 196 ~~~~k~~~~~~-~~~~vGD~~nDi~~~~~Ag~~va~~~~~~~~~~~a~~~ 244 (280)
T 3skx_A 196 AEKVKEVQQKY-VTAMVGDGVNDAPALAQADVGIAIGAGTDVAVETADIV 244 (280)
T ss_dssp HHHHHHHHTTS-CEEEEECTTTTHHHHHHSSEEEECSCCSSSCCCSSSEE
T ss_pred HHHHHHHHhcC-CEEEEeCCchhHHHHHhCCceEEecCCcHHHHhhCCEE
Confidence 99999998876 56999999999999999999999999887654443333
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.78 E-value=3.1e-21 Score=208.97 Aligned_cols=141 Identities=11% Similarity=0.075 Sum_probs=108.2
Q ss_pred ecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcc
Q 003049 671 FNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEG 750 (853)
Q Consensus 671 ~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (853)
...++||+++++++.|+++|++++|+|||+..++.++|+++|+...+..+.... +.+.+ +.
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~-----l~~~~--~~------------ 198 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNF-----MDFDE--NG------------ 198 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEEC-----EEECT--TS------------
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeee-----EEEcc--cc------------
Confidence 457999999999999999999999999999999999999999976543332210 00000 00
Q ss_pred ccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHH---hCCceEEe
Q 003049 751 LTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALK---QAHVGVAL 827 (853)
Q Consensus 751 ~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk---~AdVGIAl 827 (853)
....+.| +.+.++++..|.+|...+..+++.|+.|+|+|||+||+||+| +|||||||
T Consensus 199 ----~~~~~~~----------------~~i~~~~k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiai 258 (297)
T 4fe3_A 199 ----VLKGFKG----------------ELIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKI 258 (297)
T ss_dssp ----BEEEECS----------------SCCCTTCHHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEE
T ss_pred ----eeEeccc----------------cccchhhcccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEE
Confidence 0000011 112467889999999999999999999999999999999955 99999999
Q ss_pred c-------cCCCcCcccccccccccccCCccC
Q 003049 828 L-------NAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 828 ~-------~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
| ++++ .+..++|.++.+|++.+|
T Consensus 259 Gfl~~~v~~~~d--~~~e~~Divl~~d~~~~v 288 (297)
T 4fe3_A 259 GYLNDRVDELLE--KYMDSYDIVLVKEESLEV 288 (297)
T ss_dssp EEECSSHHHHHH--HHHHHSSEEEETCCBCHH
T ss_pred EecchhHHHhHH--HHHhhCCEEEECCCChHH
Confidence 9 4444 467889999999998764
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.7e-17 Score=161.11 Aligned_cols=120 Identities=26% Similarity=0.280 Sum_probs=94.5
Q ss_pred cCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEe-CCEEEEEEcCcHHHHHHhhccC---
Q 003049 542 VGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRV-QEEFFAFVKGAPETIQDRLTDL--- 617 (853)
Q Consensus 542 ~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~-~~~~~~~~KGapE~i~~~~~~i--- 617 (853)
.+||+|.|+++++...- .. .....++++..+||+|.+||||++++. ++++++++|||||.|+++|+.+
T Consensus 32 ~~n~~d~Ail~~~~~~~-~~-------~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~~~~~~ 103 (170)
T 3gwi_A 32 LKNLLDTAVLEGTDEES-AR-------SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHN 103 (170)
T ss_dssp CCCHHHHHHHHTSCHHH-HH-------HHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECHHHHHTTEEEEEET
T ss_pred CCChHHHHHHHHHHhcC-hh-------hhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhHHHhcC
Confidence 58999999999875310 00 001457899999999999999999986 4678999999999999999742
Q ss_pred ----------ChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCC
Q 003049 618 ----------PSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCP 674 (853)
Q Consensus 618 ----------p~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~ 674 (853)
.+.+.+.++.|+++|+||||+|||.++.... ... .+.|+||+|+||++|-|.
T Consensus 104 g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~----~~~-~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 104 GEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREG----DYQ-RADESDLILEGYIAFLDH 165 (170)
T ss_dssp TEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSS----CCC-GGGSCSEEEEEEEEEEC-
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCcc----ccC-ccccCCcEEEehhccccc
Confidence 2457788899999999999999999875321 122 246999999999999874
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.81 E-value=2.6e-09 Score=107.62 Aligned_cols=87 Identities=16% Similarity=0.180 Sum_probs=69.9
Q ss_pred HHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEeh
Q 003049 682 ILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGG 761 (853)
Q Consensus 682 ~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG 761 (853)
+|+.|++.|+++.++||++...+..+++++||.
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~----------------------------------------------- 92 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRMKALGIS----------------------------------------------- 92 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCC-----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCc-----------------------------------------------
Confidence 499999999999999999999999999999986
Q ss_pred hhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEeccCCCcCcc
Q 003049 762 DCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQS 836 (853)
Q Consensus 762 ~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~ 836 (853)
.+|... ..|...++.+.+ .| ..++|+||+.||.+|+++|++|++++++.+..++
T Consensus 93 -------------------~~~~~~--k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~na~~~~~~ 150 (195)
T 3n07_A 93 -------------------LIYQGQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQ 150 (195)
T ss_dssp -------------------EEECSC--SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCHHHHH
T ss_pred -------------------EEeeCC--CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEECChHHHHHH
Confidence 233333 345555554443 33 4699999999999999999999999988876433
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.1e-08 Score=104.39 Aligned_cols=87 Identities=23% Similarity=0.201 Sum_probs=73.0
Q ss_pred HHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEeh
Q 003049 682 ILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGG 761 (853)
Q Consensus 682 ~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG 761 (853)
+|+.|+++|+++.++||++...+..+++++||.
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~----------------------------------------------- 116 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGIT----------------------------------------------- 116 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCC-----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-----------------------------------------------
Confidence 999999999999999999999999999999985
Q ss_pred hhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHc----CCEEEEEcCCcccHHHHHhCCceEEeccCCCcCcc
Q 003049 762 DCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAV----GRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQS 836 (853)
Q Consensus 762 ~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~----g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~ 836 (853)
.+|... ..|...++.+.+. ...++|+||+.||.+|+++|+++++++++.+..++
T Consensus 117 -------------------~~f~~~--k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~~~~~ 174 (211)
T 3ij5_A 117 -------------------HLYQGQ--SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLP 174 (211)
T ss_dssp -------------------EEECSC--SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTSCTTTGG
T ss_pred -------------------hhhccc--CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeCCccHHHHh
Confidence 234333 5567777666543 46799999999999999999999999988776443
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=98.76 E-value=9.8e-09 Score=102.84 Aligned_cols=85 Identities=22% Similarity=0.260 Sum_probs=70.8
Q ss_pred HHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEeh
Q 003049 682 ILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGG 761 (853)
Q Consensus 682 ~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG 761 (853)
+|+.|++.|+++.++||++...+..+++++||.
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~----------------------------------------------- 86 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIE----------------------------------------------- 86 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCS-----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCH-----------------------------------------------
Confidence 999999999999999999999999999999985
Q ss_pred hhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHH-c---CCEEEEEcCCcccHHHHHhCCceEEeccCCCcC
Q 003049 762 DCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKA-V---GRMTLMCGDGTNDVGALKQAHVGVALLNAVPPT 834 (853)
Q Consensus 762 ~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~-~---g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~ 834 (853)
.+|... ..|...++.+.+ . ...++|+||+.||++|+++|++|++++++.+..
T Consensus 87 -------------------~~f~~~--~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~~~~ 142 (189)
T 3mn1_A 87 -------------------HLFQGR--EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASFV 142 (189)
T ss_dssp -------------------EEECSC--SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHH
T ss_pred -------------------HHhcCc--CChHHHHHHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeCCccHHH
Confidence 223322 556666666554 3 356999999999999999999999999887653
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=3.7e-08 Score=97.71 Aligned_cols=92 Identities=16% Similarity=0.146 Sum_probs=73.7
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCc
Q 003049 675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDA 754 (853)
Q Consensus 675 lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (853)
+.+++.++|++|++.|++++++||++...+..+++++|+..
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~--------------------------------------- 76 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------- 76 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce---------------------------------------
Confidence 34567899999999999999999999999999999999851
Q ss_pred eeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHH-HcC---CEEEEEcCCcccHHHHHhCCceEEeccC
Q 003049 755 HDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFK-AVG---RMTLMCGDGTNDVGALKQAHVGVALLNA 830 (853)
Q Consensus 755 ~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq-~~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~ 830 (853)
+|... ..|...++.+. +.| ..++|+||+.||++|++.|+++++++++
T Consensus 77 ---------------------------~~~~~--k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~ 127 (180)
T 1k1e_A 77 ---------------------------FFLGK--LEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADA 127 (180)
T ss_dssp ---------------------------EEESC--SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTS
T ss_pred ---------------------------eecCC--CCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeCCc
Confidence 22222 34566655443 345 5699999999999999999999999887
Q ss_pred CCcC
Q 003049 831 VPPT 834 (853)
Q Consensus 831 ~~~~ 834 (853)
.+..
T Consensus 128 ~~~~ 131 (180)
T 1k1e_A 128 PIYV 131 (180)
T ss_dssp CHHH
T ss_pred cHHH
Confidence 7653
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.66 E-value=1.7e-08 Score=99.11 Aligned_cols=104 Identities=14% Similarity=0.067 Sum_probs=76.6
Q ss_pred CcceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHH--HcCcCCCCeEEEccCCCCceeEeecCCccc
Q 003049 662 GLTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVAS--QVHIVTKPVLILCPVKNGKVYEWVSPDETE 739 (853)
Q Consensus 662 dl~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~--~~gI~~~~~~il~~~~~~~~~~~~~~~~~~ 739 (853)
+...++.+.++|. .+|+.|++.|+++.|+||+ ..+..+++ ++||.
T Consensus 30 ~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~------------------------- 76 (168)
T 3ewi_A 30 DQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK------------------------- 76 (168)
T ss_dssp SCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-------------------------
T ss_pred CCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-------------------------
Confidence 3345666666655 3899999999999999999 67778888 55542
Q ss_pred ccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHH-cC---CEEEEEcCCcccH
Q 003049 740 KIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKA-VG---RMTLMCGDGTNDV 815 (853)
Q Consensus 740 ~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~-~g---~~v~m~GDG~ND~ 815 (853)
+| ..+++|...++.+.+ .| ..++|+||+.||.
T Consensus 77 ------------------------------------------~~--~g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi 112 (168)
T 3ewi_A 77 ------------------------------------------TE--VSVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDE 112 (168)
T ss_dssp ------------------------------------------EE--CSCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGH
T ss_pred ------------------------------------------EE--ECCCChHHHHHHHHHHcCcChHHEEEEeCCHhHH
Confidence 11 123567777776655 33 4689999999999
Q ss_pred HHHHhCCceEEeccCCCcCcccccccc
Q 003049 816 GALKQAHVGVALLNAVPPTQSGNSSSE 842 (853)
Q Consensus 816 ~ALk~AdVGIAl~~~~~~~~~~~~~~~ 842 (853)
+|++.|+++++|+++.+..++.++..+
T Consensus 113 ~~~~~ag~~~a~~na~~~~k~~Ad~v~ 139 (168)
T 3ewi_A 113 ECLKRVGLSAVPADACSGAQKAVGYIC 139 (168)
T ss_dssp HHHHHSSEEEECTTCCHHHHTTCSEEC
T ss_pred HHHHHCCCEEEeCChhHHHHHhCCEEe
Confidence 999999999999999887544444333
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.65 E-value=3.1e-08 Score=108.41 Aligned_cols=118 Identities=19% Similarity=0.246 Sum_probs=79.8
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
+++|++.++++.|++.|+++.|+||++...+..+++++|+..--...++..
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~----------------------------- 228 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIV----------------------------- 228 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEE-----------------------------
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEee-----------------------------
Confidence 789999999999999999999999999999999999999852100000000
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCc
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPP 833 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~ 833 (853)
+-.++|.... ..+.++-.|+-...+.+.++-....++|+|||.||++|+++|++|++| ++.+.
T Consensus 229 --d~~~tg~~~~--------------~~~~~kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~-~~~~~ 291 (335)
T 3n28_A 229 --SGKLTGQVLG--------------EVVSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPK 291 (335)
T ss_dssp --TTEEEEEEES--------------CCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHH
T ss_pred --CCeeeeeecc--------------cccChhhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe-CCCHH
Confidence 0001111000 011122344444555555544446799999999999999999999999 77765
Q ss_pred Cccc
Q 003049 834 TQSG 837 (853)
Q Consensus 834 ~~~~ 837 (853)
.++.
T Consensus 292 ~~~~ 295 (335)
T 3n28_A 292 VEAK 295 (335)
T ss_dssp HHTT
T ss_pred HHhh
Confidence 4333
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.62 E-value=2.8e-08 Score=99.72 Aligned_cols=88 Identities=23% Similarity=0.195 Sum_probs=71.0
Q ss_pred HHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEeh
Q 003049 682 ILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGG 761 (853)
Q Consensus 682 ~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG 761 (853)
+|+.|++.|+++.++||++...+..+++++|+..
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~---------------------------------------------- 87 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH---------------------------------------------- 87 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE----------------------------------------------
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc----------------------------------------------
Confidence 3999999999999999999999999999999862
Q ss_pred hhhHHhhcchhHHhhcccceEEEee--ChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCcCc
Q 003049 762 DCFEMLQQTSAVLRVIPYVKVFARV--APEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQ 835 (853)
Q Consensus 762 ~~l~~l~~~~~~~~~~~~~~VfAr~--sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~ 835 (853)
+|... .|+-...+++.++-....++|+||+.||++|++.|+++++++++.+..+
T Consensus 88 --------------------~~~~~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~ 143 (191)
T 3n1u_A 88 --------------------YYKGQVDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVL 143 (191)
T ss_dssp --------------------EECSCSSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHH
T ss_pred --------------------ceeCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEEeCCccHHHH
Confidence 22222 4555555555555445679999999999999999999999998876533
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.61 E-value=5.4e-08 Score=96.21 Aligned_cols=84 Identities=20% Similarity=0.291 Sum_probs=69.2
Q ss_pred HHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEeh
Q 003049 682 ILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGG 761 (853)
Q Consensus 682 ~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG 761 (853)
+|+.|++.|+++.++||++...+..+++++||.
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~----------------------------------------------- 79 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP----------------------------------------------- 79 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-----------------------------------------------
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-----------------------------------------------
Confidence 999999999999999999999999999999984
Q ss_pred hhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEeccCCCcC
Q 003049 762 DCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPT 834 (853)
Q Consensus 762 ~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~ 834 (853)
+|+.. ..|...++.+.+ .| ..++|+||+.||.+|++.|++|++++++.+..
T Consensus 80 --------------------~~~~~--~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~~~~ 134 (176)
T 3mmz_A 80 --------------------VLHGI--DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVV 134 (176)
T ss_dssp --------------------EEESC--SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHH
T ss_pred --------------------eEeCC--CChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECCChhHHH
Confidence 12222 456666665544 33 56899999999999999999999999887653
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=98.59 E-value=4.3e-08 Score=101.16 Aligned_cols=156 Identities=11% Similarity=0.112 Sum_probs=88.9
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCC-----CceeE-eecCCccccccc--
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKN-----GKVYE-WVSPDETEKIQY-- 743 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~-----~~~~~-~~~~~~~~~~~~-- 743 (853)
...+.+++.++|++|++.|++++++||++...+..+++++|+.. + .| ..++. ...+. |...- .....+
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~-~-~I-~~NGa~i~~~~~~~i~~~~~l-~~~~~i~~ 95 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING-P-VF-GENGGIMFDNDGSIKKFFSNE-GTNKFLEE 95 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS-C-EE-EGGGTEEECTTSCEEESSCSH-HHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCC-e-EE-EeCCcEEEeCCCCEEEEeccH-HHHHHHHH
Confidence 45678899999999999999999999999999999999999853 1 22 11110 00111 11000 000000
Q ss_pred -------chhhhccccCceeEEEehhhhHHhhcchhHHhhcc--cceEE-----EeeCh--hhHHHHHHHHHHc-C---C
Q 003049 744 -------SEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIP--YVKVF-----ARVAP--EQKELILTTFKAV-G---R 803 (853)
Q Consensus 744 -------~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~--~~~Vf-----Ar~sP--~qK~~iV~~Lq~~-g---~ 803 (853)
+....... ....+-.. + ...+.+.+.++.. ...+. -.+.| ..|...++.+.+. | .
T Consensus 96 ~~~~~~~~~~~~~~~-~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~ 170 (227)
T 1l6r_A 96 MSKRTSMRSILTNRW-REASTGFD---I-DPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYD 170 (227)
T ss_dssp HTTTSSCBCCGGGGG-CSSSEEEB---C-CGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGG
T ss_pred HHHHhcCCccccccc-eecccceE---E-ecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHH
Confidence 00000000 00000000 0 0001111111110 23332 23345 6899988888753 3 4
Q ss_pred EEEEEcCCcccHHHHHhCCceEEeccCCCcCcc
Q 003049 804 MTLMCGDGTNDVGALKQAHVGVALLNAVPPTQS 836 (853)
Q Consensus 804 ~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~ 836 (853)
.++|+|||.||.+|++.|++||+|+++.+..++
T Consensus 171 ~~~~iGD~~nD~~m~~~ag~~va~~n~~~~~k~ 203 (227)
T 1l6r_A 171 EILVIGDSNNDMPMFQLPVRKACPANATDNIKA 203 (227)
T ss_dssp GEEEECCSGGGHHHHTSSSEEEECTTSCHHHHH
T ss_pred HEEEECCcHHhHHHHHHcCceEEecCchHHHHH
Confidence 589999999999999999999999998876443
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=6.6e-07 Score=86.15 Aligned_cols=138 Identities=12% Similarity=0.153 Sum_probs=86.7
Q ss_pred CCCcccCCCeEEEEEEecCCCccccccCCCCHHHHHHHHHhccceeeCCcccCCHHHHHHHhhcCceeccCcccccCCCC
Q 003049 491 KTGTLTSDDMEFRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGG 570 (853)
Q Consensus 491 KTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~ 570 (853)
..||+|-|++.+..+.+.++ .+.+.++.+|+..+ ..+.||+.+|+++++....+- ..
T Consensus 13 ~~~tit~gnr~vt~v~~~~g---------~~e~elL~lAAs~E------~~SeHPla~AIv~~A~~~~~l--~~------ 69 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQG---------VDEKTLADAAQLAS------LADETPEGRSIVILAKQRFNL--RE------ 69 (156)
T ss_dssp --------CEEEEEEEECTT---------SCHHHHHHHHHHTT------SSCCSHHHHHHHHHHHHHTTC--CC------
T ss_pred CCCceecCCCeEEEEEecCC---------CCHHHHHHHHHHHh------CcCCCHHHHHHHHHHHHhcCC--Cc------
Confidence 47999999999999986543 22333333333322 346799999999887421000 00
Q ss_pred CcceE--EEEEecCCCCCCceEEEEEeCCEEEEEEcCcHHHHHHhh----ccCChhHHHHHHHHHhccceEEEEEeeeCC
Q 003049 571 GNAVQ--IVQRHHFASHLKRMSVVVRVQEEFFAFVKGAPETIQDRL----TDLPSSYIETYKKYTHQGSRVLALAFKSLP 644 (853)
Q Consensus 571 ~~~~~--i~~~~~F~s~~krmsvi~~~~~~~~~~~KGapE~i~~~~----~~ip~~~~~~~~~~~~~G~rvlala~k~l~ 644 (853)
.... ..+..+|++..++.++. .+++ -+.+|+++.|..++ ..+|+.+.+..+.++++|.+++.+|.
T Consensus 70 -~~~~~~~~~~~~F~a~~G~~Gv~--v~G~--~v~vGn~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA~---- 140 (156)
T 1svj_A 70 -RDVQSLHATFVPFTAQSRMSGIN--IDNR--MIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVE---- 140 (156)
T ss_dssp -CCHHHHTCEEEEEETTTTEEEEE--ETTE--EEEEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEE----
T ss_pred -ccccccccceeeccccCCCCeEE--ECCE--EEEEeCcHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEEE----
Confidence 0000 01234787777766773 3564 46689987666655 35677788999999999999999996
Q ss_pred CCChhhhhhhcHHhhhcCcceeeEeeecCCCCc
Q 003049 645 DMTVSDARSLHRDEVENGLTFAGFAVFNCPIRE 677 (853)
Q Consensus 645 ~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~ 677 (853)
|..++|++.+.|++||
T Consensus 141 -----------------d~~l~GvIalaD~iK~ 156 (156)
T 1svj_A 141 -----------------GSRVLGVIALKDIVKG 156 (156)
T ss_dssp -----------------TTEEEEEEEEEECCCC
T ss_pred -----------------CCEEEEEEEEecCCCC
Confidence 4579999999999997
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.39 E-value=4.8e-07 Score=87.82 Aligned_cols=95 Identities=17% Similarity=0.104 Sum_probs=71.9
Q ss_pred HHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEeh
Q 003049 682 ILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGG 761 (853)
Q Consensus 682 ~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG 761 (853)
+++.|++.|+++.++||++...+..+++++|+..
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------------------------- 72 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY---------------------------------------------- 72 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE----------------------------------------------
Confidence 8999999999999999999999999999999861
Q ss_pred hhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHH-HcC---CEEEEEcCCcccHHHHHhCCceEEeccCCCcCccc
Q 003049 762 DCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFK-AVG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSG 837 (853)
Q Consensus 762 ~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq-~~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~ 837 (853)
+|... ..|...++.+. +.| ..++|+||+.||..|++.|+++++++++.+. ..
T Consensus 73 --------------------~~~~~--kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~--~~ 128 (164)
T 3e8m_A 73 --------------------LFQGV--VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFY--IR 128 (164)
T ss_dssp --------------------EECSC--SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCTTSCHH--HH
T ss_pred --------------------eeccc--CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcCChHHH--HH
Confidence 22222 33444444333 233 4699999999999999999999999888775 33
Q ss_pred ccccccccc
Q 003049 838 NSSSEASKD 846 (853)
Q Consensus 838 ~~~~~~~~~ 846 (853)
..++....+
T Consensus 129 ~~ad~v~~~ 137 (164)
T 3e8m_A 129 RLSTIFLEK 137 (164)
T ss_dssp TTCSSCCCC
T ss_pred HhCcEEecc
Confidence 344554444
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.38 E-value=2.4e-06 Score=90.36 Aligned_cols=62 Identities=31% Similarity=0.492 Sum_probs=47.1
Q ss_pred eeChh--hHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccc
Q 003049 785 RVAPE--QKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKD 846 (853)
Q Consensus 785 r~sP~--qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~ 846 (853)
...|. .|...++.+.+ .| ..|+++||+.||.+|++.|++||||+++.+..++.++.++..++
T Consensus 190 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~ 257 (279)
T 4dw8_A 190 ELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADYITLTND 257 (279)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCGG
T ss_pred EEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHHHhCCEEcCCCC
Confidence 44554 78877776654 34 34899999999999999999999999999876665555554443
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.35 E-value=1.1e-06 Score=92.89 Aligned_cols=62 Identities=24% Similarity=0.313 Sum_probs=40.5
Q ss_pred eeChh--hHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccc
Q 003049 785 RVAPE--QKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKD 846 (853)
Q Consensus 785 r~sP~--qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~ 846 (853)
...|. .|..-++.+.+ .| ..++++||+.||.+|++.|++||||++|.+..++.++.++..++
T Consensus 190 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~ 257 (279)
T 3mpo_A 190 EVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQAVTLTNA 257 (279)
T ss_dssp EEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHCSCBC----
T ss_pred EEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhcceeccCCC
Confidence 44443 48888877655 44 34899999999999999999999999999986666555554444
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.31 E-value=1.5e-06 Score=86.66 Aligned_cols=86 Identities=17% Similarity=0.203 Sum_probs=67.4
Q ss_pred HHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEe
Q 003049 681 KILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIG 760 (853)
Q Consensus 681 ~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~it 760 (853)
.+|+.|++.|+++.++||++...+..+++++|+..
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~--------------------------------------------- 94 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH--------------------------------------------- 94 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE---------------------------------------------
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce---------------------------------------------
Confidence 38999999999999999999999999999999851
Q ss_pred hhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHH-HHcC---CEEEEEcCCcccHHHHHhCCceEEeccCCCcC
Q 003049 761 GDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTF-KAVG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPT 834 (853)
Q Consensus 761 G~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~L-q~~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~ 834 (853)
+|... ..|...++.+ ++.| ..++|+||+.||..|++.|+++++++++.+..
T Consensus 95 ---------------------~~~~~--kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~~~~~~~ 149 (188)
T 2r8e_A 95 ---------------------LYQGQ--SNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLL 149 (188)
T ss_dssp ---------------------EECSC--SCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCTTT
T ss_pred ---------------------eecCC--CCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEecCcCHHH
Confidence 22222 2234444443 3334 56999999999999999999999998776653
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.26 E-value=3.1e-06 Score=90.04 Aligned_cols=59 Identities=22% Similarity=0.147 Sum_probs=46.8
Q ss_pred hhHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEeccCCCcCccccccccccccc
Q 003049 789 EQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDE 847 (853)
Q Consensus 789 ~qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~ 847 (853)
..|..-++.+.+ .| .-|+++||+.||.+|++.|++||||++|.+..++.++.++..+++
T Consensus 210 ~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~s~~e 272 (283)
T 3dao_A 210 VSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAAKHTCAPYWE 272 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHHSSEEECCGGG
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHHhcCeECCCCCC
Confidence 358888887665 44 348999999999999999999999999998876666666555544
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.24 E-value=2.1e-06 Score=86.54 Aligned_cols=126 Identities=21% Similarity=0.297 Sum_probs=84.0
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+..--..++...+
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~--------------------------- 126 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVEN--------------------------- 126 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEET---------------------------
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeC---------------------------
Confidence 46899999999999999999999999999999999999998631000000000
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEe-eChhhHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEe
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFAR-VAPEQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVAL 827 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr-~sP~qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl 827 (853)
-.++| .+... ..+..|...++.+.+ .| ..++|+||+.||+.|++.|++++++
T Consensus 127 ----~~~~~-------------------~~~~~~~~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~ 183 (217)
T 3m1y_A 127 ----DALNG-------------------LVTGHMMFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF 183 (217)
T ss_dssp ----TEEEE-------------------EEEESCCSTTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE
T ss_pred ----CEEEe-------------------eeccCCCCCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE
Confidence 00000 01111 123445555554433 33 4589999999999999999999999
Q ss_pred ccCCCcCcccccccccccccCCcc
Q 003049 828 LNAVPPTQSGNSSSEASKDENTKS 851 (853)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~ 851 (853)
++.+..+ +.++.+..++++..
T Consensus 184 -~~~~~l~--~~ad~v~~~~dl~~ 204 (217)
T 3m1y_A 184 -NAKEVLK--QHATHCINEPDLAL 204 (217)
T ss_dssp -SCCHHHH--TTCSEEECSSBGGG
T ss_pred -CccHHHH--HhcceeecccCHHH
Confidence 6665433 44556666666544
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.23 E-value=1.9e-06 Score=93.44 Aligned_cols=109 Identities=18% Similarity=0.254 Sum_probs=74.7
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
++.|++.++++.|++.|+++.++||.....+..+++.+|+..--..++...+
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~d---------------------------- 230 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRD---------------------------- 230 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEET----------------------------
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeC----------------------------
Confidence 5899999999999999999999999999999999999998521000000000
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEE-eeChhhHHHHHHHH-HHcC---CEEEEEcCCcccHHHHHhCCceEEec
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFA-RVAPEQKELILTTF-KAVG---RMTLMCGDGTNDVGALKQAHVGVALL 828 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfA-r~sP~qK~~iV~~L-q~~g---~~v~m~GDG~ND~~ALk~AdVGIAl~ 828 (853)
-.++|. +.. -..++.|..+++.+ ++.| ..++|+||+.||++|+++|++|+++
T Consensus 231 ---g~~tg~-------------------i~~~~~~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~- 287 (317)
T 4eze_A 231 ---NVLTDN-------------------ITLPIMNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW- 287 (317)
T ss_dssp ---TEEEEE-------------------ECSSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-
T ss_pred ---Ceeeee-------------------EecccCCCCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-
Confidence 001110 000 01234555555444 3333 4689999999999999999999999
Q ss_pred cCCCc
Q 003049 829 NAVPP 833 (853)
Q Consensus 829 ~~~~~ 833 (853)
++.+.
T Consensus 288 ~~~~~ 292 (317)
T 4eze_A 288 KAKPV 292 (317)
T ss_dssp SCCHH
T ss_pred CCCHH
Confidence 45443
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.23 E-value=6.7e-06 Score=87.44 Aligned_cols=58 Identities=28% Similarity=0.314 Sum_probs=45.4
Q ss_pred hhHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccc
Q 003049 789 EQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKD 846 (853)
Q Consensus 789 ~qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~ 846 (853)
..|..-++.+.+ .| ..|+++||+.||.+|++.|++||||+++.+..++.++.++..++
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~s~~ 262 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSND 262 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCTT
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHHhcCEECCCCC
Confidence 468887777654 44 34899999999999999999999999999886665555554444
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.23 E-value=9.8e-06 Score=86.17 Aligned_cols=163 Identities=17% Similarity=0.150 Sum_probs=93.3
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC-----CCeEEEccCCCCceeEee-cCCccc---ccc-
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT-----KPVLILCPVKNGKVYEWV-SPDETE---KIQ- 742 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~-----~~~~il~~~~~~~~~~~~-~~~~~~---~~~- 742 (853)
..+-+.+.++|++|++.|++++++||.....+..+.+++|+.. +...+.+..+ ...+. ..+... .+.
T Consensus 37 ~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i~~~~~---~~l~~~~l~~~~~~~i~~~ 113 (285)
T 3pgv_A 37 HFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARVHDSDG---QQIFAHNLDRDIAADLFEI 113 (285)
T ss_dssp SCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEEECTTS---CEEEECCCCHHHHHHHTTT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEEECCCC---CEEEecCCCHHHHHHHHHH
Confidence 4577889999999999999999999999999999999999852 1112221110 00000 000000 000
Q ss_pred -----------c----------chh---------------hhccc--cCceeEEEe-hh--hhHHhhcchhHHhhcc-cc
Q 003049 743 -----------Y----------SEK---------------EVEGL--TDAHDLCIG-GD--CFEMLQQTSAVLRVIP-YV 780 (853)
Q Consensus 743 -----------~----------~~~---------------~~~~~--~~~~~l~it-G~--~l~~l~~~~~~~~~~~-~~ 780 (853)
+ .+. ....+ ..-..++++ ++ .+..+.+ .+.+.+. ..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~--~l~~~~~~~~ 191 (285)
T 3pgv_A 114 VRNDPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQ--AMNARWGDRV 191 (285)
T ss_dssp TTTCTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEECSCHHHHHHHHH--HHHHHHGGGE
T ss_pred HhhcCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeCCCHHHHHHHHH--HHHHHhcCCE
Confidence 0 000 00000 011233443 22 1222211 1221111 11
Q ss_pred e------EEEeeCh--hhHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccc
Q 003049 781 K------VFARVAP--EQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSS 840 (853)
Q Consensus 781 ~------VfAr~sP--~qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~ 840 (853)
. .+....| ..|..-++.|.+ .| ..|+++||+.||.+|++.|++||||++|.+..++.++.
T Consensus 192 ~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~~A~~ 263 (285)
T 3pgv_A 192 NVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHPE 263 (285)
T ss_dssp EEEESSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCTT
T ss_pred EEEEeCCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHHhCCC
Confidence 1 1233444 458888887765 45 35899999999999999999999999999986655543
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=2.9e-06 Score=84.83 Aligned_cols=110 Identities=24% Similarity=0.298 Sum_probs=73.3
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
.++.|+++++++.|++.|+++.++||+....+..+.+++|+..- +.. .+... +
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~---~~~------~~~~~--~---------------- 127 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYA---FAN------RLIVK--D---------------- 127 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEE---EEE------EEEEE--T----------------
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeE---EEe------eeEEE--C----------------
Confidence 46778999999999999999999999999888888888887410 000 00000 0
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEe-eChhhHHHHHHHH-HHcC---CEEEEEcCCcccHHHHHhCCceEEe
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFAR-VAPEQKELILTTF-KAVG---RMTLMCGDGTNDVGALKQAHVGVAL 827 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr-~sP~qK~~iV~~L-q~~g---~~v~m~GDG~ND~~ALk~AdVGIAl 827 (853)
. .++| .+... +.+..|...+..+ ++.| ..++|+||+.||.+|++.|+++++|
T Consensus 128 --~--~~~~-------------------~~~~~~~~~~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~ 184 (211)
T 1l7m_A 128 --G--KLTG-------------------DVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF 184 (211)
T ss_dssp --T--EEEE-------------------EEECSSCSTTHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEE
T ss_pred --C--EEcC-------------------CcccCccCCccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEE
Confidence 0 0011 01001 2245665555444 4445 3489999999999999999999999
Q ss_pred ccCCCc
Q 003049 828 LNAVPP 833 (853)
Q Consensus 828 ~~~~~~ 833 (853)
+ +.+.
T Consensus 185 ~-~~~~ 189 (211)
T 1l7m_A 185 C-AKPI 189 (211)
T ss_dssp S-CCHH
T ss_pred C-CCHH
Confidence 7 4443
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.20 E-value=1.4e-06 Score=98.28 Aligned_cols=110 Identities=22% Similarity=0.285 Sum_probs=77.7
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
++.|++.+.++.|++.|+++.++||.....+..+++.+|+..- ... .+..
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~----~~~-----~l~~--------------------- 305 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYV----AAN-----ELEI--------------------- 305 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEE----EEE-----CEEE---------------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccce----eee-----eEEE---------------------
Confidence 7899999999999999999999999999999999999999521 000 0000
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEecc
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLN 829 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~ 829 (853)
.+-.+||.... .-..++.|..+++.+.+ .| ..++|+|||.||.+|++.|++|+++ +
T Consensus 306 -~dg~~tg~~~~------------------~v~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~-~ 365 (415)
T 3p96_A 306 -VDGTLTGRVVG------------------PIIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF-N 365 (415)
T ss_dssp -ETTEEEEEECS------------------SCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-S
T ss_pred -eCCEEEeeEcc------------------CCCCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE-C
Confidence 00011221000 00125667777665544 34 4589999999999999999999999 6
Q ss_pred CCCc
Q 003049 830 AVPP 833 (853)
Q Consensus 830 ~~~~ 833 (853)
+.+.
T Consensus 366 ~~~~ 369 (415)
T 3p96_A 366 AKPA 369 (415)
T ss_dssp CCHH
T ss_pred CCHH
Confidence 6554
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.20 E-value=8.2e-07 Score=88.20 Aligned_cols=102 Identities=16% Similarity=0.189 Sum_probs=78.0
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
+++|++.+.++.|++.|+++.++|+++...+..+ +.+|+..- ...
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~--------------------------------- 123 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANR--------------------------------- 123 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEE---------------------------------
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eee---------------------------------
Confidence 7899999999999999999999999998888888 88886421 000
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCC
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVP 832 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~ 832 (853)
+...... .--....|..|...++.+ ....++|+||+.||..|++.|++||+|+++.+
T Consensus 124 ---~~~~~~~-----------------~~~~~~~~~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~~~~~ 180 (201)
T 4ap9_A 124 ---AIFEDGK-----------------FQGIRLRFRDKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVGREIP 180 (201)
T ss_dssp ---EEEETTE-----------------EEEEECCSSCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEESSCCT
T ss_pred ---EEeeCCc-----------------eECCcCCccCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEECCCCc
Confidence 0000000 000345678899999888 44568899999999999999999999998766
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.18 E-value=2.6e-06 Score=82.33 Aligned_cols=93 Identities=18% Similarity=0.175 Sum_probs=69.3
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCc
Q 003049 675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDA 754 (853)
Q Consensus 675 lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (853)
+.+++.++|+.|++.|++++++||.+...+..+.+++|+..
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--------------------------------------- 77 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE--------------------------------------- 77 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE---------------------------------------
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh---------------------------------------
Confidence 35678999999999999999999999999999999999851
Q ss_pred eeEEEehhhhHHhhcchhHHhhcccceEEEeeCh--hhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCC
Q 003049 755 HDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAP--EQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVP 832 (853)
Q Consensus 755 ~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP--~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~ 832 (853)
.|....| +--..+++.+.-....++|+||+.||..|++.|++++++.++.+
T Consensus 78 ---------------------------~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~~~~~ 130 (162)
T 2p9j_A 78 ---------------------------IYTGSYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVE 130 (162)
T ss_dssp ---------------------------EEECC--CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH
T ss_pred ---------------------------hccCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEecCccH
Confidence 2222222 21122333332223458999999999999999999999987655
Q ss_pred c
Q 003049 833 P 833 (853)
Q Consensus 833 ~ 833 (853)
.
T Consensus 131 ~ 131 (162)
T 2p9j_A 131 E 131 (162)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.16 E-value=8.9e-06 Score=85.00 Aligned_cols=42 Identities=21% Similarity=0.174 Sum_probs=38.0
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
..+.+.+.++|+++++.|+++++.||.+...+..+.+++|+.
T Consensus 19 ~~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~~ 60 (258)
T 2pq0_A 19 KQLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGID 60 (258)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHHHTCC
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHhcCCC
Confidence 357788999999999999999999999999999999998863
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.13 E-value=9.6e-06 Score=82.87 Aligned_cols=106 Identities=14% Similarity=0.187 Sum_probs=74.9
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
+++|++.+.++.|++.|+++.++||.....+..+++.+|+.. ++.. .+... ++
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~----~~~~-----~~~~~--~~---------------- 144 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQH----LIAT-----DPEYR--DG---------------- 144 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCE----EEEC-----EEEEE--TT----------------
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE----EEEc-----ceEEE--CC----------------
Confidence 579999999999999999999999999999999999999851 1000 00000 00
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEE-EeeChhhHHHHHHHH-HHcC------CEEEEEcCCcccHHHHHhCCceE
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVF-ARVAPEQKELILTTF-KAVG------RMTLMCGDGTNDVGALKQAHVGV 825 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~Vf-Ar~sP~qK~~iV~~L-q~~g------~~v~m~GDG~ND~~ALk~AdVGI 825 (853)
..+|. +. .-..+..|...++.+ ++.| ..++|+||+.||.+|++.|++++
T Consensus 145 ----~~~g~-------------------~~~~~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~ 201 (232)
T 3fvv_A 145 ----RYTGR-------------------IEGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPI 201 (232)
T ss_dssp ----EEEEE-------------------EESSCSSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEE
T ss_pred ----EEeee-------------------ecCCCCcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeE
Confidence 01110 11 012246677666554 3455 57999999999999999999999
Q ss_pred Eecc
Q 003049 826 ALLN 829 (853)
Q Consensus 826 Al~~ 829 (853)
++..
T Consensus 202 ~~~~ 205 (232)
T 3fvv_A 202 AANP 205 (232)
T ss_dssp EESC
T ss_pred EECc
Confidence 9843
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.04 E-value=8.2e-06 Score=87.67 Aligned_cols=60 Identities=27% Similarity=0.284 Sum_probs=46.6
Q ss_pred hhhHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEeccCCCcCccccccccccccc
Q 003049 788 PEQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDE 847 (853)
Q Consensus 788 P~qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~ 847 (853)
+..|..-++.+.+ .| ..|+++||+.||.+|++.|++||||+++.+..++.++.++..+++
T Consensus 226 ~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~e 289 (304)
T 3l7y_A 226 GLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDE 289 (304)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHCSEECCCGGG
T ss_pred CCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhccEEcCCCCc
Confidence 3568888877755 44 348999999999999999999999999998866665555554443
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.04 E-value=5.1e-06 Score=90.62 Aligned_cols=141 Identities=13% Similarity=0.125 Sum_probs=80.9
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
++++++.++++.|++ |+.+.++|||+...+..+++.+++... +.... . ..+. ...... ..
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~---~~~~~-----~---~~~~---~~~~~~-~~---- 162 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGE---LHGTE-----V---DFDS---IAVPEG-LR---- 162 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSE---EEEEB-----C---CGGG---CCCCHH-HH----
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhh---hcccc-----c---chhh---hccccc-cc----
Confidence 579999999999999 999999999997777778888877421 11000 0 0000 000000 00
Q ss_pred ceeEEEehhhhHHhhcc--hhH---Hhhcccc--eEEE---e-eChhhHHHHHHHHHHcC--CEEEEEcCCcccHHHHHh
Q 003049 754 AHDLCIGGDCFEMLQQT--SAV---LRVIPYV--KVFA---R-VAPEQKELILTTFKAVG--RMTLMCGDGTNDVGALKQ 820 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~--~~~---~~~~~~~--~VfA---r-~sP~qK~~iV~~Lq~~g--~~v~m~GDG~ND~~ALk~ 820 (853)
.+.+.++. ..+... +.+ .+++... ..+. . ..+.+|...++.++... ++|+++|||.||++||+.
T Consensus 163 --k~~~~~~~-~~~~~~~~~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~ 239 (332)
T 1y8a_A 163 --EELLSIID-VIASLSGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEA 239 (332)
T ss_dssp --HHHHHHHH-HHHHCCHHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHH
T ss_pred --eeEEecCH-HHHhhhhHHHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHH
Confidence 00000000 000000 011 0000000 0011 1 13677999888776543 568999999999999999
Q ss_pred C----CceEEeccCCCcCcccc
Q 003049 821 A----HVGVALLNAVPPTQSGN 838 (853)
Q Consensus 821 A----dVGIAl~~~~~~~~~~~ 838 (853)
| ++|||| ++.+..++.+
T Consensus 240 A~~~~g~~vam-na~~~lk~~A 260 (332)
T 1y8a_A 240 ARGLGGVAIAF-NGNEYALKHA 260 (332)
T ss_dssp HHHTTCEEEEE-SCCHHHHTTC
T ss_pred HhhcCCeEEEe-cCCHHHHhhC
Confidence 9 999999 8887644433
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.01 E-value=1.6e-05 Score=79.68 Aligned_cols=104 Identities=16% Similarity=0.125 Sum_probs=80.0
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
-++.|++.+.++.|++. +++.++|+.+...+..+.+.+|+...-.
T Consensus 68 ~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~---------------------------------- 112 (206)
T 1rku_A 68 LKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLC---------------------------------- 112 (206)
T ss_dssp CCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEE----------------------------------
T ss_pred cCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceec----------------------------------
Confidence 46799999999999999 9999999999999999999999862100
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEec
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALL 828 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~ 828 (853)
+..+.+... .....-.-.|+.|...++.+......++|+||+.||+.|.+.|++++++.
T Consensus 113 ---~~~~~~~~~--------------~~~~~~~p~p~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~ 171 (206)
T 1rku_A 113 ---HKLEIDDSD--------------RVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH 171 (206)
T ss_dssp ---EEEEECTTS--------------CEEEEECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEES
T ss_pred ---ceeEEcCCc--------------eEEeeecCCCchHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEEC
Confidence 000111000 00011125788999999999888889999999999999999999999984
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.01 E-value=1.6e-05 Score=83.46 Aligned_cols=59 Identities=20% Similarity=0.275 Sum_probs=45.0
Q ss_pred hhHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEeccCCCcCccccccccccccc
Q 003049 789 EQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDE 847 (853)
Q Consensus 789 ~qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~ 847 (853)
..|..-++.+.+ .| ..++++||+.||.+|++.|++||||+++.+..++.++..+..+++
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e 261 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFD 261 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHCSEEECCGGG
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHHHHHhhhheeCCCch
Confidence 357777766544 33 458999999999999999999999999998866655555554443
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=97.98 E-value=6.7e-06 Score=91.31 Aligned_cols=113 Identities=13% Similarity=0.055 Sum_probs=73.9
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCC--CeEEEccCCCCceeEeecCCcccccccchhhhccc
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTK--PVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGL 751 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~--~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (853)
.++|++++.|+.|++.|++|+|+||.....+..+|+++|+.-. +..++.. .+.+.. +
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~-----~l~~~~-d--------------- 279 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGL-----RLMKDD-E--------------- 279 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEE-----CEEECT-T---------------
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEe-----EEEEec-C---------------
Confidence 4789999999999999999999999999999999999987411 1011100 000000 0
Q ss_pred cCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHc--C-CEEEEEcCCcccHHHHHh-CCceEEe
Q 003049 752 TDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAV--G-RMTLMCGDGTNDVGALKQ-AHVGVAL 827 (853)
Q Consensus 752 ~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~--g-~~v~m~GDG~ND~~ALk~-AdVGIAl 827 (853)
. .++|..- ... --+..+.|...|+.+-.. | ..++++|||.||.+||++ +|.|+++
T Consensus 280 ---G--~~tg~~~--------------~~~--p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~l 338 (385)
T 4gxt_A 280 ---G--KILPKFD--------------KDF--PISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSL 338 (385)
T ss_dssp ---C--CEEEEEC--------------TTS--CCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEE
T ss_pred ---C--ceeeeec--------------Ccc--ceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEE
Confidence 0 0111100 000 013467799999887432 2 247888999999999996 7777777
Q ss_pred c
Q 003049 828 L 828 (853)
Q Consensus 828 ~ 828 (853)
.
T Consensus 339 i 339 (385)
T 4gxt_A 339 I 339 (385)
T ss_dssp E
T ss_pred E
Confidence 5
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=5.9e-06 Score=82.79 Aligned_cols=106 Identities=14% Similarity=0.107 Sum_probs=72.3
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...- +
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f------------------~----------------- 114 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCF------------------A----------------- 114 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGS------------------C-----------------
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhc------------------C-----------------
Confidence 56789999999999999999999999999999999999985210 0
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCc-eEEeccCCC
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHV-GVALLNAVP 832 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdV-GIAl~~~~~ 832 (853)
.+.+++++. ....-.|+--..+++.+.-....++|+||+.||..|.+.|++ +|+|+++.+
T Consensus 115 -~~~i~~~~~------------------~~~kp~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~ 175 (205)
T 3m9l_A 115 -EADVLGRDE------------------APPKPHPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDN 175 (205)
T ss_dssp -GGGEECTTT------------------SCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSC
T ss_pred -cceEEeCCC------------------CCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCC
Confidence 000111100 000011222223333332222458999999999999999999 999998876
Q ss_pred c
Q 003049 833 P 833 (853)
Q Consensus 833 ~ 833 (853)
.
T Consensus 176 ~ 176 (205)
T 3m9l_A 176 P 176 (205)
T ss_dssp S
T ss_pred c
Confidence 4
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=97.91 E-value=8.3e-06 Score=83.38 Aligned_cols=104 Identities=19% Similarity=0.162 Sum_probs=74.0
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~------------------------------------ 146 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTR------------------------------------ 146 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGT------------------------------------
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhh------------------------------------
Confidence 35789999999999999999999999999999999999998632
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCc---eEEecc
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHV---GVALLN 829 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdV---GIAl~~ 829 (853)
.+.+++++... ...-.|+--..+++.+.-....++|+||+.||+.|+++|++ ||++++
T Consensus 147 --f~~~~~~~~~~-----------------~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~ 207 (237)
T 4ex6_A 147 --LTVIAGDDSVE-----------------RGKPHPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGV 207 (237)
T ss_dssp --CSEEECTTTSS-----------------SCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSS
T ss_pred --eeeEEeCCCCC-----------------CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCC
Confidence 11122222100 00112333344444444344569999999999999999999 888876
Q ss_pred CC
Q 003049 830 AV 831 (853)
Q Consensus 830 ~~ 831 (853)
+.
T Consensus 208 ~~ 209 (237)
T 4ex6_A 208 SG 209 (237)
T ss_dssp SC
T ss_pred CC
Confidence 54
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=97.91 E-value=2e-05 Score=78.93 Aligned_cols=111 Identities=14% Similarity=0.153 Sum_probs=73.8
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
.++|++.+.++.|++.|+++.++|+.....+..+.+.+|+......-.
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------- 129 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAV-------------------------------- 129 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEE--------------------------------
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEe--------------------------------
Confidence 378999999999999999999999999999999999999853211000
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHH-HHcCCEEEEEcCCcccHHHHHh--CCceEEeccC
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTF-KAVGRMTLMCGDGTNDVGALKQ--AHVGVALLNA 830 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~L-q~~g~~v~m~GDG~ND~~ALk~--AdVGIAl~~~ 830 (853)
.+.++++.. .. .......+|..|...+..+ .-....++|+||+.||.+|+++ +.+|++.+.+
T Consensus 130 --~~~~~~~~~------------~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~ 194 (219)
T 3kd3_A 130 --ETIWNSDGS------------FK-ELDNSNGACDSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEH 194 (219)
T ss_dssp --EEEECTTSB------------EE-EEECTTSTTTCHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSS
T ss_pred --eeeecCCCc------------ee-ccCCCCCCcccHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCc
Confidence 000000000 00 0011223566777777655 4355789999999999999976 3466666544
Q ss_pred C
Q 003049 831 V 831 (853)
Q Consensus 831 ~ 831 (853)
.
T Consensus 195 ~ 195 (219)
T 3kd3_A 195 I 195 (219)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.89 E-value=3.9e-05 Score=81.49 Aligned_cols=42 Identities=10% Similarity=0.160 Sum_probs=38.6
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
..+-+.++++|++|++.|++++++||.+...+..+.+++|+.
T Consensus 21 ~~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~ 62 (282)
T 1rkq_A 21 HTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHME 62 (282)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCC
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 357788999999999999999999999999999999999975
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=97.89 E-value=1.2e-05 Score=81.81 Aligned_cols=107 Identities=17% Similarity=0.187 Sum_probs=73.9
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
.++.|++.++++.|++.|+++.++|+.+...+..+.+.+|+..... ++. .+.+. .
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~--f~~-----~~~~~-~----------------- 139 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNV--FAN-----RLKFY-F----------------- 139 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGE--EEE-----CEEEC-T-----------------
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccE--Eee-----eEEEc-C-----------------
Confidence 4689999999999999999999999999999999999999862100 000 00000 0
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEe------eChhhHHHHHHHHH-HcC-CEEEEEcCCcccHHHHHhCCce
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFAR------VAPEQKELILTTFK-AVG-RMTLMCGDGTNDVGALKQAHVG 824 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr------~sP~qK~~iV~~Lq-~~g-~~v~m~GDG~ND~~ALk~AdVG 824 (853)
...+.+. +.+..|-.+++.+. +.| ..++|+||+.||+.|.++|+++
T Consensus 140 --------------------------~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~ 193 (225)
T 1nnl_A 140 --------------------------NGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAF 193 (225)
T ss_dssp --------------------------TSCEEEECTTSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEE
T ss_pred --------------------------CCcEecCCCCCcccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeE
Confidence 0001111 11235655655543 344 5689999999999999999998
Q ss_pred EEeccC
Q 003049 825 VALLNA 830 (853)
Q Consensus 825 IAl~~~ 830 (853)
|+++.+
T Consensus 194 i~~~~~ 199 (225)
T 1nnl_A 194 IGFGGN 199 (225)
T ss_dssp EEECSS
T ss_pred EEecCc
Confidence 888654
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.89 E-value=3.2e-05 Score=79.51 Aligned_cols=158 Identities=15% Similarity=0.092 Sum_probs=86.7
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCC----CceeEeecCCcc-cc-cccchh
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKN----GKVYEWVSPDET-EK-IQYSEK 746 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~----~~~~~~~~~~~~-~~-~~~~~~ 746 (853)
..+.+.+.++|++|++.|++++++||.....+..+.+++|+... .+. .++. .....|...-+. .. +..-..
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~--~i~-~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~ 95 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGP--VVA-EDGGAISYKKKRIFLASMDEEWILWNEIRK 95 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSC--EEE-GGGTEEEETTEEEESCCCSHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCe--EEE-eCCcEEEeCCEEEEeccHHHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999987431 221 1110 011111110000 00 000000
Q ss_pred hhcccc-------CceeEEEeh--hhhHHhhcchhHHhhcccceEE-----EeeCh--hhHHHHHHHHHH-cC---CEEE
Q 003049 747 EVEGLT-------DAHDLCIGG--DCFEMLQQTSAVLRVIPYVKVF-----ARVAP--EQKELILTTFKA-VG---RMTL 806 (853)
Q Consensus 747 ~~~~~~-------~~~~l~itG--~~l~~l~~~~~~~~~~~~~~Vf-----Ar~sP--~qK~~iV~~Lq~-~g---~~v~ 806 (853)
...... ....+.+.+ ..-+.+. ..+..+-....+. ....| ..|...++.+.+ .| ..++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~ 173 (231)
T 1wr8_A 96 RFPNARTSYTMPDRRAGLVIMRETINVETVR--EIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVA 173 (231)
T ss_dssp HCTTCCBCTTGGGCSSCEEECTTTSCHHHHH--HHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEE
T ss_pred hCCCceEEecCCCceeeEEEECCCCCHHHHH--HHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEE
Confidence 000000 000122222 0111110 0111111123333 23333 368777777654 34 3589
Q ss_pred EEcCCcccHHHHHhCCceEEeccCCCcCc
Q 003049 807 MCGDGTNDVGALKQAHVGVALLNAVPPTQ 835 (853)
Q Consensus 807 m~GDG~ND~~ALk~AdVGIAl~~~~~~~~ 835 (853)
|+||+.||.+|++.|++|++|+++.+..+
T Consensus 174 ~iGD~~nD~~~~~~ag~~v~~~~~~~~~~ 202 (231)
T 1wr8_A 174 HVGDGENDLDAFKVVGYKVAVAQAPKILK 202 (231)
T ss_dssp EEECSGGGHHHHHHSSEEEECTTSCHHHH
T ss_pred EECCCHHHHHHHHHcCCeEEecCCCHHHH
Confidence 99999999999999999999998876533
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.87 E-value=2e-05 Score=82.65 Aligned_cols=59 Identities=34% Similarity=0.407 Sum_probs=45.8
Q ss_pred hhHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEeccCCCcCccccccccccccc
Q 003049 789 EQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDE 847 (853)
Q Consensus 789 ~qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~ 847 (853)
..|..-++.+.+ .| ..|+++||+.||.+|++.|++||||+++.+..++.++.++..+++
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~e 255 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDN 255 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTCSEECCCTTT
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhcCEeeCCCCc
Confidence 468777776654 44 348999999999999999999999999999866665555554443
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.84 E-value=4.2e-05 Score=76.96 Aligned_cols=100 Identities=10% Similarity=0.053 Sum_probs=69.2
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...-
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~------------------------------------ 137 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF------------------------------------ 137 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC------------------------------------
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhC------------------------------------
Confidence 56789999999999999999999999988888888888875210
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEec
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALL 828 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~ 828 (853)
+.+++++... ...-.|+--..+.+.+.-....++++||+.||..|++.|++++++-
T Consensus 138 --~~~~~~~~~~-----------------~~kp~~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~ 193 (226)
T 1te2_A 138 --DALASAEKLP-----------------YSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVV 193 (226)
T ss_dssp --SEEEECTTSS-----------------CCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred --cEEEeccccC-----------------CCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEE
Confidence 1111111000 0001133333444444433356899999999999999999999993
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=97.77 E-value=5e-05 Score=75.54 Aligned_cols=102 Identities=18% Similarity=0.227 Sum_probs=72.6
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~------------------------------------- 131 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGF------------------------------------- 131 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG-------------------------------------
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhh-------------------------------------
Confidence 4689999999999999999999999999999999999998632
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccC
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNA 830 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~ 830 (853)
.+.+++++.... ..-.|+--..+++.+.-....++|+||+.||..|.+.|++++++.+.
T Consensus 132 -f~~~~~~~~~~~-----------------~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~ 190 (214)
T 3e58_A 132 -FDIVLSGEEFKE-----------------SKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRD 190 (214)
T ss_dssp -CSEEEEGGGCSS-----------------CTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECC
T ss_pred -eeeEeecccccC-----------------CCCChHHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECC
Confidence 111222221100 00122233344444443335689999999999999999999988754
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=97.77 E-value=6.2e-05 Score=78.33 Aligned_cols=38 Identities=13% Similarity=0.270 Sum_probs=35.3
Q ss_pred cchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 677 EDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 677 ~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
+.++++|++|++.|++++++||.....+..+.+++|+.
T Consensus 20 ~~~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~ 57 (249)
T 2zos_A 20 DPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (249)
T ss_dssp GGGHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 45999999999999999999999999999999999874
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.77 E-value=1e-05 Score=81.88 Aligned_cols=117 Identities=13% Similarity=0.117 Sum_probs=76.2
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~------------------------------------ 128 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFY------------------------------------ 128 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGG------------------------------------
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhh------------------------------------
Confidence 46789999999999999999999999999999999999988631
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCc---eEEecc
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHV---GVALLN 829 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdV---GIAl~~ 829 (853)
.+.+++++.... ..-.|+--..+.+.+.-....++|+||+.||+.|++.|++ ||++++
T Consensus 129 --f~~~~~~~~~~~-----------------~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~ 189 (226)
T 3mc1_A 129 --FDAIVGSSLDGK-----------------LSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGF 189 (226)
T ss_dssp --CSEEEEECTTSS-----------------SCSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSS
T ss_pred --eeeeeccCCCCC-----------------CCCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCC
Confidence 111111111000 0001222223333333233468999999999999999999 888776
Q ss_pred CCCcCcccccccccc
Q 003049 830 AVPPTQSGNSSSEAS 844 (853)
Q Consensus 830 ~~~~~~~~~~~~~~~ 844 (853)
+.+....+...+...
T Consensus 190 ~~~~~~~~~~ad~v~ 204 (226)
T 3mc1_A 190 GSYEELKNAGANYIV 204 (226)
T ss_dssp SCHHHHHHHTCSEEE
T ss_pred CCHHHHHHcCCCEEE
Confidence 654433233344333
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.74 E-value=4.7e-05 Score=78.66 Aligned_cols=100 Identities=19% Similarity=0.197 Sum_probs=70.4
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
.++.|++.++++.|++.|+++.++|+.+...+..+.+.+|+...
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~------------------------------------ 156 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHL------------------------------------ 156 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG------------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchhe------------------------------------
Confidence 46789999999999999999999999999999999999998531
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEe
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVAL 827 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl 827 (853)
.+.+++++.... ..-.|+--..+++.+.-....++|+||+.||+.|++.|++++.+
T Consensus 157 --f~~~~~~~~~~~-----------------~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~ 212 (243)
T 2hsz_A 157 --FSEMLGGQSLPE-----------------IKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVG 212 (243)
T ss_dssp --CSEEECTTTSSS-----------------CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred --EEEEEecccCCC-----------------CCcCHHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEE
Confidence 111222221100 00123334444555543345689999999999999999998544
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.72 E-value=5.1e-05 Score=77.15 Aligned_cols=103 Identities=20% Similarity=0.216 Sum_probs=72.6
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
.++.|++.++++.|++.|+++.++|+.....+..+.+.+|+...
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~------------------------------------ 125 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGY------------------------------------ 125 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG------------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHH------------------------------------
Confidence 45789999999999999999999999999989999999997521
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCce-EEeccC
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVG-VALLNA 830 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVG-IAl~~~ 830 (853)
.+.+++++... ...-.|+--..+++.+.-....++|+||+.||+.|.+.|+++ |++..+
T Consensus 126 --f~~i~~~~~~~-----------------~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g 185 (222)
T 2nyv_A 126 --FDLIVGGDTFG-----------------EKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWG 185 (222)
T ss_dssp --CSEEECTTSSC-----------------TTCCTTHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTS
T ss_pred --heEEEecCcCC-----------------CCCCChHHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCC
Confidence 11112221100 001234444455555543445689999999999999999988 776644
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.66 E-value=7.8e-05 Score=75.79 Aligned_cols=103 Identities=12% Similarity=0.146 Sum_probs=67.1
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
++.|++.+.++.|++.|+++.++|+... +..+.+.+|+...
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~------------------------------------- 132 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDD------------------------------------- 132 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTT-------------------------------------
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhh-------------------------------------
Confidence 4789999999999999999999999754 6778888887532
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCc
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPP 833 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~ 833 (853)
.+.+++++... ...-.|+-=..+.+.+.-....++|+||+.||+.|.+.|++++++.++.+.
T Consensus 133 -f~~i~~~~~~~-----------------~~Kp~~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~ 194 (233)
T 3nas_A 133 -FHAIVDPTTLA-----------------KGKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQP 194 (233)
T ss_dssp -CSEECCC--------------------------CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC----
T ss_pred -cCEEeeHhhCC-----------------CCCCChHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCccc
Confidence 11112221100 011122222344444443335689999999999999999999999976654
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.65 E-value=7.3e-05 Score=80.26 Aligned_cols=42 Identities=7% Similarity=0.112 Sum_probs=38.1
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHH--HHcC-cC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVA--SQVH-IV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA--~~~g-I~ 714 (853)
..+-+.+.++|++|++.|++++++||.....+..+. +++| +.
T Consensus 44 ~~is~~~~~al~~l~~~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~ 88 (301)
T 2b30_A 44 IKVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMN 88 (301)
T ss_dssp TCSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHT
T ss_pred CccCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHhhHHhhcccc
Confidence 457788999999999999999999999999999999 9888 64
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=97.62 E-value=7.8e-05 Score=74.87 Aligned_cols=41 Identities=12% Similarity=0.077 Sum_probs=36.6
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
++.+++.+.++.|++.|+++.++|+........+.+.+|+.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~ 129 (225)
T 3d6j_A 89 ILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPD 129 (225)
T ss_dssp EECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCT
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCch
Confidence 34689999999999999999999999998888888888875
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=97.61 E-value=2.9e-05 Score=78.02 Aligned_cols=101 Identities=9% Similarity=0.084 Sum_probs=67.3
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
++.+++.+.++.|++.|+++.++|++ ..+..+.+.+|+...
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~------------------------------------- 131 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGY------------------------------------- 131 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGG-------------------------------------
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHH-------------------------------------
Confidence 46799999999999999999999998 445667777777521
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeC--hhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCC
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVA--PEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAV 831 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~s--P~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~ 831 (853)
.+.+++++.. .+.. |+--..+.+.+.-....++|+||+.||..|++.|+++++|.++.
T Consensus 132 -f~~~~~~~~~-------------------~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~ 191 (221)
T 2wf7_A 132 -FDAIADPAEV-------------------AASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRP 191 (221)
T ss_dssp -CSEECCTTTS-------------------SSCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCH
T ss_pred -cceEeccccC-------------------CCCCCChHHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEECCH
Confidence 0111111110 0111 22222333333322345899999999999999999999999765
Q ss_pred Cc
Q 003049 832 PP 833 (853)
Q Consensus 832 ~~ 833 (853)
+.
T Consensus 192 ~~ 193 (221)
T 2wf7_A 192 ED 193 (221)
T ss_dssp HH
T ss_pred HH
Confidence 53
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.61 E-value=0.0004 Score=72.96 Aligned_cols=41 Identities=10% Similarity=0.103 Sum_probs=37.1
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
..+-+.+.++|++ ++.|++++++||.....+..+.+++|+.
T Consensus 18 ~~i~~~~~~al~~-~~~Gi~v~iaTGR~~~~~~~~~~~l~~~ 58 (268)
T 1nf2_A 18 LEISEKDRRNIEK-LSRKCYVVFASGRMLVSTLNVEKKYFKR 58 (268)
T ss_dssp SCCCHHHHHHHHH-HTTTSEEEEECSSCHHHHHHHHHHHSSS
T ss_pred CccCHHHHHHHHH-HhCCCEEEEECCCChHHHHHHHHHhCCC
Confidence 3466789999999 9999999999999999999999999974
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.57 E-value=8.6e-05 Score=73.28 Aligned_cols=102 Identities=13% Similarity=0.142 Sum_probs=69.7
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
.+.|++.+.++.|++.|+++.++|+++..... ..+.+|+...
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~------------------------------------- 126 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESY------------------------------------- 126 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGG-------------------------------------
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhh-------------------------------------
Confidence 46899999999999999999999999988877 7787777421
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCce-EEeccCC
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVG-VALLNAV 831 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVG-IAl~~~~ 831 (853)
.+.+++++... ...-.|+--..+.+.+.-....++++||+.||..|++.|+++ |+|.++.
T Consensus 127 -f~~~~~~~~~~-----------------~~Kp~~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~ 187 (207)
T 2go7_A 127 -FTEILTSQSGF-----------------VRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST 187 (207)
T ss_dssp -EEEEECGGGCC-----------------CCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS
T ss_pred -eeeEEecCcCC-----------------CCCCCcHHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEecCC
Confidence 11111111100 000112222344444443334589999999999999999997 8887765
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=0.0011 Score=65.61 Aligned_cols=53 Identities=9% Similarity=0.083 Sum_probs=44.2
Q ss_pred EEEcCcHHHHHHhhccCChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCC
Q 003049 601 AFVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCP 674 (853)
Q Consensus 601 ~~~KGapE~i~~~~~~ip~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~ 674 (853)
-+..|+++.+.+....+|+...+.+.++..+|..++.+|. |-.++|++.+.|+
T Consensus 133 ~v~iGn~~~m~~~gi~i~~~~~~~~~~~~~~G~T~V~vai---------------------dg~l~g~iavaD~ 185 (185)
T 2kmv_A 133 KVLIGNREWMIRNGLVINNDVNDFMTEHERKGRTAVLVAV---------------------DDELCGLIAIADT 185 (185)
T ss_dssp EEEEECHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEE---------------------TTEEEEEEEEECC
T ss_pred EEEECCHHHHHHcCCCCCHHHHHHHHHHHhCCCeEEEEEE---------------------CCEEEEEEEEEcC
Confidence 4556999999887777888777778889999999999986 4578999999985
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00014 Score=73.64 Aligned_cols=101 Identities=15% Similarity=0.111 Sum_probs=70.8
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~------------------------------------ 138 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNS------------------------------------ 138 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGG------------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhh------------------------------------
Confidence 46789999999999999999999999999999999999988531
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEec
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALL 828 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~ 828 (853)
.+.+++++.... ..-.|+--..+.+.+.-....++|+||+.||+.|.++|++++++.
T Consensus 139 --f~~~~~~~~~~~-----------------~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~ 195 (230)
T 3um9_A 139 --FDHLISVDEVRL-----------------FKPHQKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWI 195 (230)
T ss_dssp --CSEEEEGGGTTC-----------------CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEE
T ss_pred --cceeEehhhccc-----------------CCCChHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEE
Confidence 111222221100 001122223344444333355899999999999999999999995
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00012 Score=74.28 Aligned_cols=101 Identities=11% Similarity=0.118 Sum_probs=71.0
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
.++.|++.++++.|++.|+++.++|+.....+..+.+.+|+...
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~------------------------------------ 141 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGL------------------------------------ 141 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTT------------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhh------------------------------------
Confidence 45789999999999999999999999999999999999988632
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEec
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALL 828 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~ 828 (853)
.+.+++++.... ..-.|+--..+.+.+.-....++|+||+.||+.|.+.|++++++.
T Consensus 142 --f~~~~~~~~~~~-----------------~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v 198 (233)
T 3umb_A 142 --FDHVLSVDAVRL-----------------YKTAPAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWI 198 (233)
T ss_dssp --CSEEEEGGGTTC-----------------CTTSHHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEE
T ss_pred --cCEEEEecccCC-----------------CCcCHHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEE
Confidence 111222211100 001122223344444333356899999999999999999999994
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.54 E-value=6.2e-05 Score=76.26 Aligned_cols=43 Identities=12% Similarity=0.065 Sum_probs=38.8
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~ 715 (853)
.++.+++.+.++.|++.|+++.++|+.....+..+.+..|+..
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~ 132 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDI 132 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCT
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhh
Confidence 3567999999999999999999999999999999999998863
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00017 Score=75.91 Aligned_cols=54 Identities=20% Similarity=0.136 Sum_probs=41.8
Q ss_pred hhHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccc
Q 003049 789 EQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSE 842 (853)
Q Consensus 789 ~qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~ 842 (853)
..|...++.+.+ .| ..++++||+.||.+|++.|++|++|+++.+..++.++..+
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~ 247 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYAT 247 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEEC
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccHHHHHhCCeeC
Confidence 478888887765 34 3589999999999999999999999998876444333333
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00018 Score=71.18 Aligned_cols=42 Identities=10% Similarity=0.057 Sum_probs=38.5
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCC-hhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQ-ALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn-~~TA~~VA~~~gI~ 714 (853)
.++.|++.++|+.|++.|+++.++||.+ ...+..+.+.+|+.
T Consensus 67 ~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp ECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred cCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 3678999999999999999999999998 68899999999985
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00012 Score=74.46 Aligned_cols=105 Identities=14% Similarity=0.164 Sum_probs=70.3
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~------------------------------------ 145 (231)
T 3kzx_A 102 FMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHY------------------------------------ 145 (231)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGG------------------------------------
T ss_pred ceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhh------------------------------------
Confidence 35689999999999999999999999999999999999998631
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCC-EEEEEcCCcccHHHHHhCCc-eEEeccC
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGR-MTLMCGDGTNDVGALKQAHV-GVALLNA 830 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~-~v~m~GDG~ND~~ALk~AdV-GIAl~~~ 830 (853)
.+.+++++... ...-.|+--..+.+.+.-... .++|+||+.||+.|.++|++ +|.++++
T Consensus 146 --f~~i~~~~~~~-----------------~~Kp~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~ 206 (231)
T 3kzx_A 146 --FDSIIGSGDTG-----------------TIKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGST 206 (231)
T ss_dssp --CSEEEEETSSS-----------------CCTTSSHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEECC-
T ss_pred --eeeEEcccccC-----------------CCCCChHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEECCC
Confidence 01111111100 000112222344444443334 68999999999999999997 6666555
Q ss_pred CC
Q 003049 831 VP 832 (853)
Q Consensus 831 ~~ 832 (853)
.+
T Consensus 207 ~~ 208 (231)
T 3kzx_A 207 NI 208 (231)
T ss_dssp --
T ss_pred CC
Confidence 43
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00022 Score=75.12 Aligned_cols=110 Identities=9% Similarity=-0.047 Sum_probs=74.1
Q ss_pred CCCCcchHHHHHHHhhCCC--cEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcc
Q 003049 673 CPIREDSAKILSELKNSSQ--DLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEG 750 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi--~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (853)
-++.|++.++++.|++.|+ ++.++|+.....+..+.+.+|+...-..+
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v------------------------------ 190 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGL------------------------------ 190 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEE------------------------------
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceE------------------------------
Confidence 4678999999999999999 99999999999999999999986321111
Q ss_pred ccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcC-CEEEEEcCCcccHHHHHhCCceEEecc
Q 003049 751 LTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVG-RMTLMCGDGTNDVGALKQAHVGVALLN 829 (853)
Q Consensus 751 ~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g-~~v~m~GDG~ND~~ALk~AdVGIAl~~ 829 (853)
++++.... ......-.|+-=..+.+.+.-.. ..++|+||+.||..|.++|++|.+++.
T Consensus 191 --------~~~~~~~~-------------~~~~~Kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~ 249 (282)
T 3nuq_A 191 --------TYCDYSRT-------------DTLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHL 249 (282)
T ss_dssp --------ECCCCSSC-------------SSCCCTTSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEE
T ss_pred --------EEeccCCC-------------cccCCCcCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEE
Confidence 11100000 00001112222233333343333 568999999999999999999999986
Q ss_pred CCCc
Q 003049 830 AVPP 833 (853)
Q Consensus 830 ~~~~ 833 (853)
+.+.
T Consensus 250 ~~~~ 253 (282)
T 3nuq_A 250 VENE 253 (282)
T ss_dssp CSCC
T ss_pred cCCc
Confidence 6554
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00031 Score=70.96 Aligned_cols=96 Identities=15% Similarity=0.135 Sum_probs=67.6
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCCC---hhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccc
Q 003049 675 IREDSAKILSELKNSSQDLAMITGDQ---ALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGL 751 (853)
Q Consensus 675 lr~~a~~~I~~L~~agi~v~miTGDn---~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (853)
+.+++.+.++.|++.|+++.++|+.. ...+..+.+.+|+...
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~----------------------------------- 144 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEF----------------------------------- 144 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGG-----------------------------------
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHH-----------------------------------
Confidence 48999999999999999999999999 8888888888887521
Q ss_pred cCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcC---CEEEEEcCCc-ccHHHHHhCCceEEe
Q 003049 752 TDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVG---RMTLMCGDGT-NDVGALKQAHVGVAL 827 (853)
Q Consensus 752 ~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g---~~v~m~GDG~-ND~~ALk~AdVGIAl 827 (853)
.+.+++++... +..|. ...+-..+++.| ..++|+||+. ||..|++.|++++++
T Consensus 145 ---f~~~~~~~~~~-------------------~~kp~-~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~ 201 (235)
T 2om6_A 145 ---IDKTFFADEVL-------------------SYKPR-KEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVW 201 (235)
T ss_dssp ---CSEEEEHHHHT-------------------CCTTC-HHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEE
T ss_pred ---hhhheeccccC-------------------CCCCC-HHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEE
Confidence 11222322111 01121 112223344444 4589999999 999999999999999
Q ss_pred c
Q 003049 828 L 828 (853)
Q Consensus 828 ~ 828 (853)
.
T Consensus 202 ~ 202 (235)
T 2om6_A 202 I 202 (235)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00013 Score=75.03 Aligned_cols=113 Identities=19% Similarity=0.225 Sum_probs=74.2
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
-++.|++.++++.|++.|+++.++|+.+...+..+.+ |+..-.. ++.... ... +.
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~~~-v~~~~~-----~~~--~~--------------- 130 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEKDR-IYCNHA-----SFD--ND--------------- 130 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCGGG-EEEEEE-----ECS--SS---------------
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCCCe-EEeeee-----EEc--CC---------------
Confidence 4689999999999999999999999999988888887 7642211 111000 000 00
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEe
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVAL 827 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl 827 (853)
.++|. +.. ++...+-+....+|..+++.+......++|+||+.||+.|.++|++.++.
T Consensus 131 -----~~~~~----~~k--------p~p~~~~~~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~ 188 (236)
T 2fea_A 131 -----YIHID----WPH--------SCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFAR 188 (236)
T ss_dssp -----BCEEE----CTT--------CCCTTCCSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEEC
T ss_pred -----ceEEe----cCC--------CCccccccccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeec
Confidence 00000 000 00000001135678899988876677899999999999999999998864
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00041 Score=72.37 Aligned_cols=44 Identities=20% Similarity=0.292 Sum_probs=38.5
Q ss_pred hhHHHHHHHHHH-cC-----CEEEEEcCCcccHHHHHhCCceEEeccCCC
Q 003049 789 EQKELILTTFKA-VG-----RMTLMCGDGTNDVGALKQAHVGVALLNAVP 832 (853)
Q Consensus 789 ~qK~~iV~~Lq~-~g-----~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~ 832 (853)
..|..-++.+.+ .| ..++++||+.||.+|++.|++|+||+++.+
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~ 224 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP 224 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh
Confidence 578888887765 34 569999999999999999999999999988
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00025 Score=72.03 Aligned_cols=101 Identities=14% Similarity=0.082 Sum_probs=70.9
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...
T Consensus 94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~------------------------------------ 137 (232)
T 1zrn_A 94 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDG------------------------------------ 137 (232)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG------------------------------------
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhh------------------------------------
Confidence 35789999999999999999999999999988999999988521
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEec
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALL 828 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~ 828 (853)
.+.+++++... ...-.|+--..+.+.+.-....++|+||+.||..|.+.|++++++.
T Consensus 138 --f~~~~~~~~~~-----------------~~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~ 194 (232)
T 1zrn_A 138 --FDHLLSVDPVQ-----------------VYKPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWI 194 (232)
T ss_dssp --CSEEEESGGGT-----------------CCTTSHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEE
T ss_pred --hheEEEecccC-----------------CCCCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEE
Confidence 11122221110 0011233333444444333345899999999999999999998885
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.39 E-value=7.2e-05 Score=76.61 Aligned_cols=42 Identities=21% Similarity=0.153 Sum_probs=38.8
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 150 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDID 150 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCG
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcH
Confidence 457899999999999999999999999999999999999986
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00034 Score=71.58 Aligned_cols=100 Identities=12% Similarity=0.140 Sum_probs=68.6
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~------------------------------------ 147 (240)
T 2no4_A 104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRV------------------------------------ 147 (240)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG------------------------------------
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHH------------------------------------
Confidence 36789999999999999999999999999999999999998531
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEe
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVAL 827 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl 827 (853)
.+.+++++.... ..-.|+--..+.+.+.-....++|+||+.||+.|.+.|++...+
T Consensus 148 --f~~~~~~~~~~~-----------------~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~ 203 (240)
T 2no4_A 148 --LDSCLSADDLKI-----------------YKPDPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVR 203 (240)
T ss_dssp --CSEEEEGGGTTC-----------------CTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred --cCEEEEccccCC-----------------CCCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEE
Confidence 111222221100 00123233334444433334589999999999999999966544
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00046 Score=69.85 Aligned_cols=104 Identities=18% Similarity=0.185 Sum_probs=70.6
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+...
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~------------------------------------- 141 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDL------------------------------------- 141 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGG-------------------------------------
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHH-------------------------------------
Confidence 5679999999999999 99999999999988999998887521
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCc-ccHHHHHhCC---ceEEecc
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGT-NDVGALKQAH---VGVALLN 829 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~-ND~~ALk~Ad---VGIAl~~ 829 (853)
.+.+++++.... ..-.|+--..+.+.+.-....++|+||+. ||+.|.+.|+ +++++++
T Consensus 142 -f~~~~~~~~~~~-----------------~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~ 203 (234)
T 3u26_A 142 -FDSITTSEEAGF-----------------FKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKG 203 (234)
T ss_dssp -CSEEEEHHHHTB-----------------CTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSS
T ss_pred -cceeEeccccCC-----------------CCcCHHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCC
Confidence 112223222110 00112222334444433335699999997 9999999999 5666665
Q ss_pred CCCc
Q 003049 830 AVPP 833 (853)
Q Consensus 830 ~~~~ 833 (853)
+.+.
T Consensus 204 ~~~~ 207 (234)
T 3u26_A 204 EKRE 207 (234)
T ss_dssp TTGG
T ss_pred Cccc
Confidence 5544
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00051 Score=67.20 Aligned_cols=97 Identities=13% Similarity=0.162 Sum_probs=65.5
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
.+.|++.+.++.|++.|+++.++|+... .+..+.+.+|+...
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~------------------------------------- 123 (190)
T 2fi1_A 82 ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAY------------------------------------- 123 (190)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGG-------------------------------------
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhh-------------------------------------
Confidence 3689999999999999999999998864 56677777776421
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeC--hhhHHHHHHHHHHcCC-EEEEEcCCcccHHHHHhCCceEEeccC
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVA--PEQKELILTTFKAVGR-MTLMCGDGTNDVGALKQAHVGVALLNA 830 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~s--P~qK~~iV~~Lq~~g~-~v~m~GDG~ND~~ALk~AdVGIAl~~~ 830 (853)
.+.+++++.. .+.. |+--..+. ++.|. .++|+||+.||..|++.|++++++.+.
T Consensus 124 -f~~~~~~~~~-------------------~~~kp~~~~~~~~~---~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~ 180 (190)
T 2fi1_A 124 -FTEVVTSSSG-------------------FKRKPNPESMLYLR---EKYQISSGLVIGDRPIDIEAGQAAGLDTHLFTS 180 (190)
T ss_dssp -EEEEECGGGC-------------------CCCTTSCHHHHHHH---HHTTCSSEEEEESSHHHHHHHHHTTCEEEECSC
T ss_pred -eeeeeecccc-------------------CCCCCCHHHHHHHH---HHcCCCeEEEEcCCHHHHHHHHHcCCeEEEECC
Confidence 1122222210 0111 22222333 33332 689999999999999999999888754
Q ss_pred C
Q 003049 831 V 831 (853)
Q Consensus 831 ~ 831 (853)
.
T Consensus 181 ~ 181 (190)
T 2fi1_A 181 I 181 (190)
T ss_dssp H
T ss_pred C
Confidence 3
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00015 Score=73.48 Aligned_cols=41 Identities=17% Similarity=0.163 Sum_probs=37.5
Q ss_pred CCCcchHHHHHHHhhC-CCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNS-SQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~a-gi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
++.|++.+.++.|++. |+++.++|+.+...+..+.+.+|+.
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID 134 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCch
Confidence 4679999999999999 9999999999999888888888875
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00018 Score=71.95 Aligned_cols=99 Identities=14% Similarity=0.153 Sum_probs=69.2
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
.++.|++.+.++.|++. +++.++|+.....+..+.+.+|+...
T Consensus 82 ~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~------------------------------------ 124 (209)
T 2hdo_A 82 IELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMR------------------------------------ 124 (209)
T ss_dssp CEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGG------------------------------------
T ss_pred CCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhh------------------------------------
Confidence 35689999999999999 99999999999888888888887521
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEeeC--hhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEecc
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVA--PEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLN 829 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~s--P~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~ 829 (853)
.+.+++++.. .... |+--..+.+.+.-....++|+||+.||..|.+.|++++++.+
T Consensus 125 --f~~~~~~~~~-------------------~~~KP~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~ 182 (209)
T 2hdo_A 125 --MAVTISADDT-------------------PKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAV 182 (209)
T ss_dssp --EEEEECGGGS-------------------SCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEG
T ss_pred --ccEEEecCcC-------------------CCCCCCcHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEc
Confidence 1122222211 0112 222233334433233468999999999999999999999864
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0014 Score=69.00 Aligned_cols=40 Identities=10% Similarity=0.201 Sum_probs=36.8
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 675 lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
+-+.++++|++|++.|++++++||.....+..+.+++|+.
T Consensus 27 ~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 66 (275)
T 1xvi_A 27 DWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 66 (275)
T ss_dssp SCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred CCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4467899999999999999999999999999999999874
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00073 Score=68.44 Aligned_cols=101 Identities=15% Similarity=0.157 Sum_probs=70.1
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
.++.|++.++++.|+ .|+++.++|+.....+..+.+.+|+...
T Consensus 106 ~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~------------------------------------ 148 (240)
T 3qnm_A 106 SGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRY------------------------------------ 148 (240)
T ss_dssp CCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGG------------------------------------
T ss_pred CCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhh------------------------------------
Confidence 356899999999999 9999999999999888888888887532
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcC---CEEEEEcCCc-ccHHHHHhCCceEEec
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVG---RMTLMCGDGT-NDVGALKQAHVGVALL 828 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g---~~v~m~GDG~-ND~~ALk~AdVGIAl~ 828 (853)
.+.+++++... ...|+ ...+-..+++.| ..++|+||+. ||..|.++|++++++.
T Consensus 149 --f~~~~~~~~~~-------------------~~kp~-~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~ 206 (240)
T 3qnm_A 149 --FKKIILSEDLG-------------------VLKPR-PEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFY 206 (240)
T ss_dssp --CSEEEEGGGTT-------------------CCTTS-HHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEE
T ss_pred --ceeEEEeccCC-------------------CCCCC-HHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEE
Confidence 11122221110 01111 122223344444 4589999995 9999999999999998
Q ss_pred cCCC
Q 003049 829 NAVP 832 (853)
Q Consensus 829 ~~~~ 832 (853)
+...
T Consensus 207 ~~~~ 210 (240)
T 3qnm_A 207 NVTE 210 (240)
T ss_dssp CCSC
T ss_pred cCCC
Confidence 6554
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00029 Score=70.37 Aligned_cols=104 Identities=10% Similarity=0.037 Sum_probs=69.3
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHH------cCcCCCCeEEEccCCCCceeEeecCCcccccccchhh
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQ------VHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKE 747 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~------~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (853)
++.|++.++++.|++ |+++.++|+.....+..+.+. .|+...
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~------------------------------- 136 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSF------------------------------- 136 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGG-------------------------------
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHH-------------------------------
Confidence 467899999999999 999999999888777766665 455311
Q ss_pred hccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEe
Q 003049 748 VEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVAL 827 (853)
Q Consensus 748 ~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl 827 (853)
.+.+++++.... ..-.|+--..+++.+.-....++|+||+.||+.|.+.|+++.++
T Consensus 137 -------f~~~~~~~~~~~-----------------~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~ 192 (211)
T 2i6x_A 137 -------FDKVYASCQMGK-----------------YKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYC 192 (211)
T ss_dssp -------SSEEEEHHHHTC-----------------CTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEEC
T ss_pred -------cCeEEeecccCC-----------------CCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEE
Confidence 122233321110 01122222334444433334589999999999999999999999
Q ss_pred ccCCCc
Q 003049 828 LNAVPP 833 (853)
Q Consensus 828 ~~~~~~ 833 (853)
.++.+.
T Consensus 193 ~~~~~~ 198 (211)
T 2i6x_A 193 PDNGEN 198 (211)
T ss_dssp CCTTCC
T ss_pred ECCHHH
Confidence 876654
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0018 Score=67.48 Aligned_cols=188 Identities=18% Similarity=0.217 Sum_probs=96.0
Q ss_pred CChhHHHHHHHHHhccceEEEEEeeeCCCC-C-hhhhhh---hcHHhhhcCccee---eEeeecCCC-CcchHHHHHHHh
Q 003049 617 LPSSYIETYKKYTHQGSRVLALAFKSLPDM-T-VSDARS---LHRDEVENGLTFA---GFAVFNCPI-REDSAKILSELK 687 (853)
Q Consensus 617 ip~~~~~~~~~~~~~G~rvlala~k~l~~~-~-~~~~~~---~~r~~~E~dl~f~---G~l~~~d~l-r~~a~~~I~~L~ 687 (853)
+++...+.++.+.++|.++....-|. ... . ..+... .+ ..+..|...+ |-+..+.++ ++.+.+.++.++
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~-~~~~~~~~~l~~~~~~~-~~i~~nGa~i~~~~~~i~~~~l~~~~~~~i~~~~~ 98 (261)
T 2rbk_A 21 IPSSTIEALEAAHAKGLKIFIATGRP-KAIINNLSELQDRNLID-GYITMNGAYCFVGEEVIYKSAIPQEEVKAMAAFCE 98 (261)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEECSSC-GGGCCSCHHHHHTTCCC-EEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCEEEEECCCh-HHHHHHHHHhCcccccC-eEEEeCCEEEEECCEEEEecCCCHHHHHHHHHHHH
Confidence 55667777888999999876655454 321 1 111110 00 0122222222 333455554 567888999999
Q ss_pred hCCCcEEEEcCCChhhH---HHHH-HH---cCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEe
Q 003049 688 NSSQDLAMITGDQALTA---CYVA-SQ---VHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIG 760 (853)
Q Consensus 688 ~agi~v~miTGDn~~TA---~~VA-~~---~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~it 760 (853)
+.++.+.+.|+|..... ..+. .. +++..... .... .........+.+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~-~~~~~~~~k~~~~ 153 (261)
T 2rbk_A 99 KKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPT------------------------VSFE-EASNKEVIQMTPF 153 (261)
T ss_dssp HHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCB------------------------CCHH-HHHTSCCSEEEEC
T ss_pred HcCCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCc------------------------cccc-hhccCceeEEEEE
Confidence 98999888888764210 1111 11 11100000 0000 0000112334444
Q ss_pred hhhhHHhhcchhHHhhcccceEEE------eeC--hhhHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEec
Q 003049 761 GDCFEMLQQTSAVLRVIPYVKVFA------RVA--PEQKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALL 828 (853)
Q Consensus 761 G~~l~~l~~~~~~~~~~~~~~VfA------r~s--P~qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~ 828 (853)
++.-... .+.+.++...+.. .+. ...|...++.+.+ .| ..++++||+.||.+|++.|++|++|+
T Consensus 154 ~~~~~~~----~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~ 229 (261)
T 2rbk_A 154 ITEEEEK----EVLPSIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG 229 (261)
T ss_dssp CCHHHHH----HHGGGSTTCEEECSSTTCCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT
T ss_pred eCHHHHH----HHHHhcCCeEEEEecCCeEEecCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEec
Confidence 4321100 1112222222211 112 2357766666543 34 35899999999999999999999999
Q ss_pred cCCCcCc
Q 003049 829 NAVPPTQ 835 (853)
Q Consensus 829 ~~~~~~~ 835 (853)
++.+..+
T Consensus 230 n~~~~~~ 236 (261)
T 2rbk_A 230 QAKEDVK 236 (261)
T ss_dssp TSCHHHH
T ss_pred CccHHHH
Confidence 8877543
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00024 Score=73.91 Aligned_cols=103 Identities=17% Similarity=0.120 Sum_probs=69.2
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
++.+++.+.++.|++.|+++.++|++....+..+.+.+|+...-
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~------------------------------------ 146 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK------------------------------------ 146 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC------------------------------------
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccC------------------------------------
Confidence 56799999999999999999999999998888888888764210
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcC-CEEEEEcCCcccHHHHHhCC---ceEEecc
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVG-RMTLMCGDGTNDVGALKQAH---VGVALLN 829 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g-~~v~m~GDG~ND~~ALk~Ad---VGIAl~~ 829 (853)
.+.+++++... ...-.|+--..+++.+.-.. ..++|+||+.||..|++.|+ |||++++
T Consensus 147 -~~~~~~~~~~~-----------------~~kp~~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~ 208 (267)
T 1swv_A 147 -PDFLVTPDDVP-----------------AGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGS 208 (267)
T ss_dssp -CSCCBCGGGSS-----------------CCTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTC
T ss_pred -hHheecCCccC-----------------CCCCCHHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCC
Confidence 00011111000 00012333344555554333 56899999999999999999 5666665
Q ss_pred C
Q 003049 830 A 830 (853)
Q Consensus 830 ~ 830 (853)
+
T Consensus 209 ~ 209 (267)
T 1swv_A 209 S 209 (267)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00074 Score=66.77 Aligned_cols=101 Identities=11% Similarity=0.041 Sum_probs=69.8
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
++.|++.+.++.|++.| ++.++|+.+...+..+.+.+|+...
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~------------------------------------- 127 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEF------------------------------------- 127 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGT-------------------------------------
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHh-------------------------------------
Confidence 47899999999999999 9999999999999999999987531
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccC
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNA 830 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~ 830 (853)
.+.+++++... ...-.|+--..+++.+.-....++|+||+.||+.|.+.|++...+.+.
T Consensus 128 -f~~~~~~~~~~-----------------~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~ 186 (200)
T 3cnh_A 128 -LLAFFTSSALG-----------------VMKPNPAMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVD 186 (200)
T ss_dssp -CSCEEEHHHHS-----------------CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSC
T ss_pred -cceEEeecccC-----------------CCCCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEECC
Confidence 01122222110 001123223334444433334589999999999999999999887643
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00034 Score=71.52 Aligned_cols=41 Identities=10% Similarity=0.135 Sum_probs=33.0
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.++.|++.+.++.|++.|+++.++|+.....+....+. |+.
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~ 147 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFP 147 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HST
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHH
Confidence 46789999999999999999999999887777777766 775
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00023 Score=73.31 Aligned_cols=34 Identities=12% Similarity=0.218 Sum_probs=29.4
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHH
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACY 706 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~ 706 (853)
.++.|++.++++.|++.|+++.++|+.....+..
T Consensus 111 ~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~ 144 (250)
T 3l5k_A 111 AALMPGAEKLIIHLRKHGIPFALATSSRSASFDM 144 (250)
T ss_dssp CCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHH
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHH
Confidence 4678999999999999999999999998665544
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.09 E-value=0.00069 Score=70.47 Aligned_cols=102 Identities=9% Similarity=-0.039 Sum_probs=69.5
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
.++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+..-.
T Consensus 110 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~----------------------------------- 154 (277)
T 3iru_A 110 SQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYT----------------------------------- 154 (277)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCC-----------------------------------
T ss_pred CccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCC-----------------------------------
Confidence 367899999999999999999999999999989998888875320
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcC-CEEEEEcCCcccHHHHHhCCc---eEEec
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVG-RMTLMCGDGTNDVGALKQAHV---GVALL 828 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g-~~v~m~GDG~ND~~ALk~AdV---GIAl~ 828 (853)
.+.+++++.... ..-.|+-=..+.+.+.-.. ..++|+||+.||..|.+.|++ ||+++
T Consensus 155 --~~~~~~~~~~~~-----------------~kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g 215 (277)
T 3iru_A 155 --PASTVFATDVVR-----------------GRPFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCS 215 (277)
T ss_dssp --CSEEECGGGSSS-----------------CTTSSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSS
T ss_pred --CceEecHHhcCC-----------------CCCCHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecC
Confidence 111222221000 0011222234444444444 668999999999999999994 55555
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0012 Score=67.54 Aligned_cols=41 Identities=17% Similarity=0.185 Sum_probs=37.5
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELD 134 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcH
Confidence 56899999999999999999999999988888888888875
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.00053 Score=72.07 Aligned_cols=41 Identities=15% Similarity=0.001 Sum_probs=36.7
Q ss_pred CCCcchHHHHHHHhhC-CCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNS-SQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~a-gi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.+.+++.+.++.|++. |+++.++|+.....+..+.+.+|+.
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~ 155 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK 155 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 4578999999999999 9999999999998888888888874
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00042 Score=73.50 Aligned_cols=47 Identities=28% Similarity=0.309 Sum_probs=36.6
Q ss_pred hHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEeccCCCcCcc
Q 003049 790 QKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQS 836 (853)
Q Consensus 790 qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~ 836 (853)
.|...++.+.+ .| ..++|+||+.||.+|++.|++|++++++.+..++
T Consensus 211 ~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~~ 261 (289)
T 3gyg_A 211 GKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKN 261 (289)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHHH
T ss_pred CHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHHH
Confidence 46666655543 34 3589999999999999999999999998776443
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0011 Score=65.80 Aligned_cols=97 Identities=10% Similarity=0.122 Sum_probs=68.5
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
.++.|++.+ ++.|++. +++.++|+.+...+..+.+.+|+...
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~------------------------------------ 114 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRY------------------------------------ 114 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGG------------------------------------
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHh------------------------------------
Confidence 356799999 9999999 99999999999888999999988521
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEec
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALL 828 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~ 828 (853)
.+.+++++.... ..-.|+--..+++.+. ...++|+||+.||..|.+.|+++.++-
T Consensus 115 --f~~~~~~~~~~~-----------------~Kp~~~~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~ 169 (201)
T 2w43_A 115 --FKGIFSAESVKE-----------------YKPSPKVYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFV 169 (201)
T ss_dssp --CSEEEEGGGGTC-----------------CTTCHHHHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEE
T ss_pred --CcEEEehhhcCC-----------------CCCCHHHHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEE
Confidence 112223221100 0012333344555554 356889999999999999999998774
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0015 Score=67.39 Aligned_cols=101 Identities=18% Similarity=0.175 Sum_probs=70.1
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
-++.|++.++++.|+ |+++.++|+.+...+..+.+.+|+...
T Consensus 92 ~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~------------------------------------ 133 (253)
T 1qq5_A 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDS------------------------------------ 133 (253)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGG------------------------------------
T ss_pred CCCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhh------------------------------------
Confidence 367899999999999 999999999999999999999987521
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccC
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNA 830 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~ 830 (853)
.+.+++++... ...-.|+--..+++.+.-....++|+||+.||+.|.+.|+++.++.+.
T Consensus 134 --f~~~~~~~~~~-----------------~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~ 192 (253)
T 1qq5_A 134 --FDAVISVDAKR-----------------VFKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVAR 192 (253)
T ss_dssp --CSEEEEGGGGT-----------------CCTTSHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECC
T ss_pred --ccEEEEccccC-----------------CCCCCHHHHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECC
Confidence 11122222110 001123233334444432334589999999999999999999988765
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00042 Score=71.78 Aligned_cols=42 Identities=12% Similarity=0.081 Sum_probs=38.3
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.++.+++.++++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 150 (259)
T 4eek_A 109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLT 150 (259)
T ss_dssp CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCH
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChH
Confidence 456789999999999999999999999999999999999875
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0019 Score=65.35 Aligned_cols=41 Identities=15% Similarity=0.197 Sum_probs=37.1
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.++.|++.++++.|++. +++.++|+.....+..+.+.+|+.
T Consensus 102 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~ 142 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLF 142 (238)
T ss_dssp CCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCG
T ss_pred CCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChH
Confidence 45789999999999999 999999999998888888888875
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=96.94 E-value=0.00068 Score=69.42 Aligned_cols=41 Identities=12% Similarity=0.133 Sum_probs=35.0
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.++.|++.+.++.|++.|+++.++|+.....+....+. |+.
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~ 148 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFP 148 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HST
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHH
Confidence 35789999999999999999999999987777766666 765
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.00045 Score=67.45 Aligned_cols=28 Identities=11% Similarity=0.146 Sum_probs=26.2
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCh
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQA 701 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~ 701 (853)
++.|++.++|++|++.|+++.++|+...
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~ 54 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSG 54 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTT
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCc
Confidence 5789999999999999999999999886
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0014 Score=67.12 Aligned_cols=98 Identities=15% Similarity=0.142 Sum_probs=67.3
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
++.|++.++++.|++. +++.++|+.....+..+.+.+|+. -
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~-f------------------------------------- 160 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP-W------------------------------------- 160 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC-C-------------------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC-c-------------------------------------
Confidence 5678999999999985 999999999998888888888874 1
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEecc
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLN 829 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~ 829 (853)
+.+++++... ...-.|+-=..+.+.+.-....++|+||+.||+.|.+.|+++++|.+
T Consensus 161 --~~~~~~~~~~-----------------~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~ 217 (254)
T 3umc_A 161 --DMLLCADLFG-----------------HYKPDPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIA 217 (254)
T ss_dssp --SEECCHHHHT-----------------CCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEEC
T ss_pred --ceEEeecccc-----------------cCCCCHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEe
Confidence 0111111100 00011222223333333233458999999999999999999999986
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.00064 Score=69.72 Aligned_cols=41 Identities=7% Similarity=0.085 Sum_probs=36.5
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
++.|++.+.++.|++.|+++.++|+.+...+..+.+.+|+.
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 150 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG 150 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc
Confidence 45789999999999999999999999888888888888864
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.83 E-value=0.00029 Score=69.97 Aligned_cols=105 Identities=12% Similarity=0.186 Sum_probs=65.4
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHH-cCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQ-VHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~-~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
++.|++.+.++.|++.|+++.++|+.....+..+.+. .|+..
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~------------------------------------- 133 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRD------------------------------------- 133 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHH-------------------------------------
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhh-------------------------------------
Confidence 5689999999999999999999998765443333222 22210
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCC
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVP 832 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~ 832 (853)
..+.++++..... ..-.|+--..+++.+.-....++|+||+.||+.|.+.|+++..+.++.+
T Consensus 134 -~f~~~~~~~~~~~-----------------~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~ 195 (206)
T 2b0c_A 134 -AADHIYLSQDLGM-----------------RKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKT 195 (206)
T ss_dssp -HCSEEEEHHHHTC-----------------CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred -heeeEEEecccCC-----------------CCCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCCc
Confidence 0122233321100 0112223334444444334568999999999999999999988876554
Q ss_pred c
Q 003049 833 P 833 (853)
Q Consensus 833 ~ 833 (853)
.
T Consensus 196 ~ 196 (206)
T 2b0c_A 196 T 196 (206)
T ss_dssp H
T ss_pred h
Confidence 3
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0017 Score=65.11 Aligned_cols=92 Identities=13% Similarity=0.058 Sum_probs=67.9
Q ss_pred CCCCcchHHHHHHHhhCC-CcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccc
Q 003049 673 CPIREDSAKILSELKNSS-QDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGL 751 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~ag-i~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (853)
.++.|++.+.++.|++.| +++.++|+........+.+.+|+...-
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f---------------------------------- 149 (234)
T 3ddh_A 104 IELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYF---------------------------------- 149 (234)
T ss_dssp CCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGC----------------------------------
T ss_pred CCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhh----------------------------------
Confidence 356889999999999999 999999999888888888888875210
Q ss_pred cCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHH-HHHHcC---CEEEEEcCCc-ccHHHHHhCCceEE
Q 003049 752 TDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILT-TFKAVG---RMTLMCGDGT-NDVGALKQAHVGVA 826 (853)
Q Consensus 752 ~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~-~Lq~~g---~~v~m~GDG~-ND~~ALk~AdVGIA 826 (853)
+ .++..-.| |...++ .+++.| ..++|+||+. ||..|.+.|+++++
T Consensus 150 ----~------------------------~~~~~~kp--k~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v 199 (234)
T 3ddh_A 150 ----D------------------------HIEVMSDK--TEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGV 199 (234)
T ss_dssp ----S------------------------EEEEESCC--SHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEE
T ss_pred ----h------------------------eeeecCCC--CHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEE
Confidence 0 12222233 333333 333334 4589999996 99999999999998
Q ss_pred ec
Q 003049 827 LL 828 (853)
Q Consensus 827 l~ 828 (853)
+-
T Consensus 200 ~v 201 (234)
T 3ddh_A 200 HI 201 (234)
T ss_dssp EC
T ss_pred Ee
Confidence 84
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0021 Score=66.92 Aligned_cols=103 Identities=12% Similarity=0.111 Sum_probs=70.6
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
++.|++.++++.|++.|+++.++|+... ....+.+.+|+...
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~~~------------------------------------- 147 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLREH------------------------------------- 147 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCGGG-------------------------------------
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcHHh-------------------------------------
Confidence 4679999999999999999999998766 45778888887521
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCc-ccHHHHHhCCceEEeccCCC
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGT-NDVGALKQAHVGVALLNAVP 832 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~-ND~~ALk~AdVGIAl~~~~~ 832 (853)
.+.+++++... ...-.|+--..+++.+.-....++|+||+. ||+.|.++|++++++.+...
T Consensus 148 -f~~~~~~~~~~-----------------~~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~ 209 (263)
T 3k1z_A 148 -FDFVLTSEAAG-----------------WPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQ 209 (263)
T ss_dssp -CSCEEEHHHHS-----------------SCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSS
T ss_pred -hhEEEeecccC-----------------CCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCC
Confidence 11122222111 011123333444444443335689999997 99999999999999986554
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=96.73 E-value=0.00086 Score=67.25 Aligned_cols=40 Identities=25% Similarity=0.225 Sum_probs=36.1
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
++.|++.+.++.|++ |+++.++|+.+...+..+-+.+|+.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~ 123 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIH 123 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCG
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCch
Confidence 567999999999999 9999999999888888888888886
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0021 Score=64.59 Aligned_cols=103 Identities=11% Similarity=0.075 Sum_probs=65.8
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
++.+++.+.++.|+. ++.++|+.+......+.+++|+...
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~------------------------------------- 126 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPY------------------------------------- 126 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGG-------------------------------------
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHh-------------------------------------
Confidence 567889999988875 9999999999988889888887521
Q ss_pred ce-eEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCce-EEeccCC
Q 003049 754 AH-DLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVG-VALLNAV 831 (853)
Q Consensus 754 ~~-~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVG-IAl~~~~ 831 (853)
. +.+++++....- .+ .-.|+--..+++.+.-....++++||+.||..|++.|+++ |++.++.
T Consensus 127 -~~~~~~~~~~~~~~-------------~~--kpk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~ 190 (229)
T 2fdr_A 127 -FAPHIYSAKDLGAD-------------RV--KPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGAS 190 (229)
T ss_dssp -TTTCEEEHHHHCTT-------------CC--TTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCST
T ss_pred -ccceEEeccccccC-------------CC--CcCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCC
Confidence 0 112222211000 00 0112222333344432334589999999999999999998 7676654
Q ss_pred C
Q 003049 832 P 832 (853)
Q Consensus 832 ~ 832 (853)
+
T Consensus 191 ~ 191 (229)
T 2fdr_A 191 H 191 (229)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.001 Score=61.31 Aligned_cols=41 Identities=7% Similarity=0.061 Sum_probs=36.9
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
++.|++.+++++|++.|+++.++|+.+...+..+.+.+|+.
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~ 58 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETN 58 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHT
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChH
Confidence 46789999999999999999999999998888888888875
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0022 Score=65.01 Aligned_cols=104 Identities=10% Similarity=0.070 Sum_probs=69.5
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHH------cCcCCCCeEEEccCCCCceeEeecCCcccccccchhh
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQ------VHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKE 747 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~------~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (853)
++.|++.++++.|++. +++.++|+.+...+..+.+. .|+..
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~-------------------------------- 158 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVED-------------------------------- 158 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHH--------------------------------
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHH--------------------------------
Confidence 4679999999999998 99999999998888777643 44421
Q ss_pred hccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEe
Q 003049 748 VEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVAL 827 (853)
Q Consensus 748 ~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl 827 (853)
..+.++++.... ...-.|+-=..+++.+.-....++|+||+.||+.|.++|+++..+
T Consensus 159 ------~fd~i~~~~~~~-----------------~~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~ 215 (229)
T 4dcc_A 159 ------YFEKTYLSYEMK-----------------MAKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYT 215 (229)
T ss_dssp ------HCSEEEEHHHHT-----------------CCTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEEC
T ss_pred ------hCCEEEeecccC-----------------CCCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEE
Confidence 011222222110 011122333344444443335689999999999999999999999
Q ss_pred ccCCCc
Q 003049 828 LNAVPP 833 (853)
Q Consensus 828 ~~~~~~ 833 (853)
.++.+.
T Consensus 216 v~~~~~ 221 (229)
T 4dcc_A 216 PKAGED 221 (229)
T ss_dssp CCTTCC
T ss_pred ECCHHH
Confidence 876554
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0018 Score=66.17 Aligned_cols=97 Identities=16% Similarity=0.188 Sum_probs=68.2
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
-++.|++.++++.|++. +++.++|+.....+..+.+.+|+.-.
T Consensus 115 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f~------------------------------------ 157 (254)
T 3umg_A 115 LTPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPWD------------------------------------ 157 (254)
T ss_dssp CCBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCCS------------------------------------
T ss_pred CcCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCee------------------------------------
Confidence 35689999999999997 99999999999999999999887410
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcC---CEEEEEcCCcccHHHHHhCCceEEecc
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVG---RMTLMCGDGTNDVGALKQAHVGVALLN 829 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~ 829 (853)
.+++++.. .+..|+ ..-+-..+++.| ..++|+||+.||..|.++|+++++|.+
T Consensus 158 ----~~~~~~~~-------------------~~~kp~-~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~ 213 (254)
T 3umg_A 158 ----VIIGSDIN-------------------RKYKPD-PQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFIL 213 (254)
T ss_dssp ----CCCCHHHH-------------------TCCTTS-HHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEEC
T ss_pred ----EEEEcCcC-------------------CCCCCC-HHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEe
Confidence 00111100 011222 112223344444 458999999999999999999999986
Q ss_pred C
Q 003049 830 A 830 (853)
Q Consensus 830 ~ 830 (853)
.
T Consensus 214 ~ 214 (254)
T 3umg_A 214 R 214 (254)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0026 Score=64.13 Aligned_cols=100 Identities=14% Similarity=0.145 Sum_probs=68.7
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
.++.|++.++++.|++ |+++.++|+.....+..+.+.++-.
T Consensus 98 ~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~~-------------------------------------- 138 (240)
T 3smv_A 98 WPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGVE-------------------------------------- 138 (240)
T ss_dssp CCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCSC--------------------------------------
T ss_pred CCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCCc--------------------------------------
Confidence 3678999999999999 8999999999887776665553311
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcC---CEEEEEcCCc-ccHHHHHhCCceEEec
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVG---RMTLMCGDGT-NDVGALKQAHVGVALL 828 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g---~~v~m~GDG~-ND~~ALk~AdVGIAl~ 828 (853)
.+.+++++.... ..-+|+-....++.+++.| ..++|+||+. ||+.|.++|++++++.
T Consensus 139 --fd~i~~~~~~~~-----------------~KP~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~ 199 (240)
T 3smv_A 139 --FDHIITAQDVGS-----------------YKPNPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWI 199 (240)
T ss_dssp --CSEEEEHHHHTS-----------------CTTSHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEE
T ss_pred --cCEEEEccccCC-----------------CCCCHHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEE
Confidence 223333332211 1123443445544455555 4589999996 9999999999999996
Q ss_pred cC
Q 003049 829 NA 830 (853)
Q Consensus 829 ~~ 830 (853)
+.
T Consensus 200 ~~ 201 (240)
T 3smv_A 200 YR 201 (240)
T ss_dssp CT
T ss_pred cC
Confidence 53
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0036 Score=64.29 Aligned_cols=93 Identities=10% Similarity=0.059 Sum_probs=67.0
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
.++.|++.++++.|+ .|+++.++|+.....+....+.+|+...-
T Consensus 111 ~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f----------------------------------- 154 (251)
T 2pke_A 111 VEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLF----------------------------------- 154 (251)
T ss_dssp CCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTC-----------------------------------
T ss_pred CCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhC-----------------------------------
Confidence 356899999999999 99999999999988888888888875210
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEeeCh--hhHHHHHHHHHHcCCEEEEEcCCc-ccHHHHHhCCceEEec
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAP--EQKELILTTFKAVGRMTLMCGDGT-NDVGALKQAHVGVALL 828 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP--~qK~~iV~~Lq~~g~~v~m~GDG~-ND~~ALk~AdVGIAl~ 828 (853)
+ .+++.-.| +--..+.+.+.-.-..++|+||+. ||..|.+.|++++++-
T Consensus 155 ---~------------------------~i~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v 206 (251)
T 2pke_A 155 ---P------------------------RIEVVSEKDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYT 206 (251)
T ss_dssp ---C------------------------CEEEESCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEEC
T ss_pred ---c------------------------eeeeeCCCCHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEE
Confidence 0 12222222 222333333332334589999999 9999999999998876
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0023 Score=64.52 Aligned_cols=41 Identities=12% Similarity=0.122 Sum_probs=35.8
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCCh---------------hhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQA---------------LTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~---------------~TA~~VA~~~gI~ 714 (853)
++.|++.++|++|++.|+++.++|+... ..+..+.+++|+.
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 105 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD 105 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc
Confidence 6789999999999999999999999993 5667777888874
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0028 Score=65.24 Aligned_cols=46 Identities=11% Similarity=0.219 Sum_probs=38.8
Q ss_pred eeChh--hHHHHHHHHHHcCCEEEEEcCCcccHHHHHhC--CceEEeccCC
Q 003049 785 RVAPE--QKELILTTFKAVGRMTLMCGDGTNDVGALKQA--HVGVALLNAV 831 (853)
Q Consensus 785 r~sP~--qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~A--dVGIAl~~~~ 831 (853)
.+.|. .|..-++.|.+.-. |+++|||.||.+||+.| +.||||+++.
T Consensus 153 ei~~~~~~Kg~al~~l~~~~g-via~GD~~ND~~Ml~~a~~g~~vam~Na~ 202 (239)
T 1u02_A 153 ELRVPGVNKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIKVGEGE 202 (239)
T ss_dssp EEECTTCCHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEEESSSC
T ss_pred EEEcCCCCHHHHHHHHHhhCC-eEEEeCCCccHHHHHHhhCCcEEEECCCC
Confidence 44454 79999999877422 88999999999999999 9999999984
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=96.27 E-value=0.01 Score=58.37 Aligned_cols=42 Identities=14% Similarity=0.225 Sum_probs=38.0
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCCh---hhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQA---LTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~---~TA~~VA~~~gI~ 714 (853)
.++.|++.++++.|++.|+++.++|+-.. ..+..+.+.+|+.
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~ 77 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGII 77 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCG
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCch
Confidence 46899999999999999999999998776 7888899999986
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.10 E-value=0.0097 Score=60.05 Aligned_cols=42 Identities=5% Similarity=0.066 Sum_probs=36.6
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCCh---------------hhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQA---------------LTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~---------------~TA~~VA~~~gI~ 714 (853)
.++.|++.++|++|++.|+++.++|+... ..+..+.+++|+.
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 111 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF 111 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc
Confidence 56789999999999999999999999887 5667778888873
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.08 E-value=0.0029 Score=66.96 Aligned_cols=48 Identities=31% Similarity=0.280 Sum_probs=38.6
Q ss_pred hHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEeccCCCcCccc
Q 003049 790 QKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSG 837 (853)
Q Consensus 790 qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~ 837 (853)
.|..-++.+.+ .| ..++|+||+.||.+|++.|++||+|+++.+..++.
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~~~~~~ 267 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSI 267 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCHHHHhh
Confidence 58777777665 34 35899999999999999999999999887764443
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=96.06 E-value=0.01 Score=59.23 Aligned_cols=42 Identities=14% Similarity=0.067 Sum_probs=38.8
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~ 715 (853)
++.|++.++++.|++.|+++.++|+-+...+..+-+.+|+..
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~ 125 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK 125 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCc
Confidence 467899999999999999999999999999999999999863
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=95.93 E-value=0.021 Score=59.21 Aligned_cols=40 Identities=18% Similarity=0.204 Sum_probs=36.5
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
++.|++.++++.|++ ++++.++|+.+...+..+.+.+|+.
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~ 160 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQ 160 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCG
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHH
Confidence 678999999999998 5999999999999888889999986
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=95.81 E-value=0.0035 Score=64.75 Aligned_cols=47 Identities=30% Similarity=0.474 Sum_probs=38.7
Q ss_pred hHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEeccCCCcCcc
Q 003049 790 QKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQS 836 (853)
Q Consensus 790 qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~ 836 (853)
.|..-++.+.+ .| ..++++||+.||.+|++.|++||+|+++.+..++
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~ 212 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLH 212 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcHHHHH
Confidence 68888877765 34 3589999999999999999999999988776444
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=95.78 E-value=0.0091 Score=62.01 Aligned_cols=84 Identities=10% Similarity=0.170 Sum_probs=63.3
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChh----hHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhh
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQAL----TACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEV 748 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~----TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (853)
.++.|++.+.++.|++.|+++.++||-... .+..-.+++||..-..
T Consensus 100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~------------------------------ 149 (260)
T 3pct_A 100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVND------------------------------ 149 (260)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCST------------------------------
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCcccc------------------------------
Confidence 578899999999999999999999998653 6666677889862100
Q ss_pred ccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCC-EEEEEcCCcccHHH
Q 003049 749 EGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGR-MTLMCGDGTNDVGA 817 (853)
Q Consensus 749 ~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~-~v~m~GDG~ND~~A 817 (853)
. .++-|-....|....+.|++.|+ +|+++||-.+|.++
T Consensus 150 ------~-------------------------~Lilr~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 150 ------K-------------------------TLLLKKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp ------T-------------------------TEEEESSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred ------c-------------------------eeEecCCCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 0 12333334668888888888665 57899999999986
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=95.61 E-value=0.091 Score=50.66 Aligned_cols=51 Identities=12% Similarity=0.167 Sum_probs=41.5
Q ss_pred EEcCcHHHHHHhhccCChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecC
Q 003049 602 FVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNC 673 (853)
Q Consensus 602 ~~KGapE~i~~~~~~ip~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d 673 (853)
+.-|+++.+.+....+|+...+....+..+|..++.+|. |-.++|++.+.|
T Consensus 115 v~iGn~~~m~~~gi~~~~~~~~~~~~~~~~G~T~v~va~---------------------dg~~~g~i~l~D 165 (165)
T 2arf_A 115 VLIGNREWLRRNGLTISSDVSDAMTDHEMKGQTAILVAI---------------------DGVLCGMIAIAD 165 (165)
T ss_dssp EEEECHHHHHHHHCSSCHHHHHHHHHHHTTTSEEEEEEE---------------------TTEEEEEEEECC
T ss_pred EEEcCHHHHHhcCCCCCHHHHHHHHHHHhCCCeEEEEEE---------------------CCEEEEEEEEEC
Confidence 445999999887667787777777888889999998886 457899999876
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=95.23 E-value=0.034 Score=55.25 Aligned_cols=36 Identities=14% Similarity=0.126 Sum_probs=30.7
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHH
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVA 708 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA 708 (853)
.++.|++.++++.|++.|+++.++||-....+..++
T Consensus 35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~ 70 (196)
T 2oda_A 35 AQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA 70 (196)
T ss_dssp GSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc
Confidence 367899999999999999999999998877664444
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=95.22 E-value=0.034 Score=57.59 Aligned_cols=40 Identities=13% Similarity=0.132 Sum_probs=33.2
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcC---CChhhHHHHHHHcCcC
Q 003049 675 IREDSAKILSELKNSSQDLAMITG---DQALTACYVASQVHIV 714 (853)
Q Consensus 675 lr~~a~~~I~~L~~agi~v~miTG---Dn~~TA~~VA~~~gI~ 714 (853)
+-++++++|++|+++|++++++|| ..........+++|+.
T Consensus 23 ~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~ 65 (266)
T 3pdw_A 23 KIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIP 65 (266)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCC
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 446899999999999999999988 5666666777788885
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=95.19 E-value=0.035 Score=55.55 Aligned_cols=94 Identities=16% Similarity=0.186 Sum_probs=59.0
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
++.|++.++++.|++. +++.++|+.+.. -+.+|+..
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~-------------------------------------- 140 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLAD-------------------------------------- 140 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGG--------------------------------------
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHH--------------------------------------
Confidence 5788999999999998 999999987654 23344321
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCc-ccHHHHHhCCceEEec
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGT-NDVGALKQAHVGVALL 828 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~-ND~~ALk~AdVGIAl~ 828 (853)
..+.+++++.... ..-.|+--..+.+.+.-....++|+||+. ||+.|.+.|+++.++.
T Consensus 141 ~f~~~~~~~~~~~-----------------~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v 199 (230)
T 3vay_A 141 YFAFALCAEDLGI-----------------GKPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWY 199 (230)
T ss_dssp GCSEEEEHHHHTC-----------------CTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEE
T ss_pred HeeeeEEccccCC-----------------CCcCHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEE
Confidence 1122233322110 01122222333344433334589999998 9999999999998885
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=94.65 E-value=0.02 Score=59.53 Aligned_cols=84 Identities=10% Similarity=0.131 Sum_probs=61.7
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCCh----hhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhh
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQA----LTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEV 748 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~----~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (853)
.++.|++.+.++.|++.|+++.++||-+. ..+..-.+++||..-.
T Consensus 100 ~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~------------------------------- 148 (262)
T 3ocu_A 100 SRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVE------------------------------- 148 (262)
T ss_dssp CEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCS-------------------------------
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCccc-------------------------------
Confidence 57789999999999999999999999865 3566667788986210
Q ss_pred ccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCC-EEEEEcCCcccHHH
Q 003049 749 EGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGR-MTLMCGDGTNDVGA 817 (853)
Q Consensus 749 ~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~-~v~m~GDG~ND~~A 817 (853)
.. .++-|-.-..|....+.+.+.|+ +|+++||-.+|.++
T Consensus 149 -----~~-------------------------~Lilr~~~~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 149 -----ES-------------------------AFYLKKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp -----GG-------------------------GEEEESSCSCCHHHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred -----cc-------------------------ceeccCCCCChHHHHHHHHhcCCCEEEEECCChHHhcc
Confidence 00 12223223557778888887764 57899999999875
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=94.59 E-value=0.0086 Score=62.43 Aligned_cols=52 Identities=17% Similarity=0.218 Sum_probs=41.1
Q ss_pred hHHHHHHHHHHcC---CEEEEEcC----CcccHHHHHhCC-ceEEeccCCCcCccccccccc
Q 003049 790 QKELILTTFKAVG---RMTLMCGD----GTNDVGALKQAH-VGVALLNAVPPTQSGNSSSEA 843 (853)
Q Consensus 790 qK~~iV~~Lq~~g---~~v~m~GD----G~ND~~ALk~Ad-VGIAl~~~~~~~~~~~~~~~~ 843 (853)
.|..-++.| .| ..|+++|| |.||.+||+.|+ +|+||+++.+..++.++..+.
T Consensus 197 sKg~al~~l--~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~a~~v~~ 256 (262)
T 2fue_A 197 DKRYCLDSL--DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFFP 256 (262)
T ss_dssp STTHHHHHH--TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHCT
T ss_pred CHHHHHHHH--HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHhhheeCC
Confidence 588888888 44 46899999 999999999999 699999998875554444433
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=94.56 E-value=0.019 Score=57.67 Aligned_cols=40 Identities=15% Similarity=0.270 Sum_probs=34.9
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
++.|++.++++.|++.|+++.++|+... .+..+.+.+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~ 134 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLK 134 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCG
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcH
Confidence 5679999999999999999999999866 467788888875
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=94.40 E-value=0.071 Score=56.45 Aligned_cols=97 Identities=13% Similarity=-0.045 Sum_probs=66.8
Q ss_pred eecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhH---HHHHHH--------cCcCCCCeEEEccCCCCceeEeecCCcc
Q 003049 670 VFNCPIREDSAKILSELKNSSQDLAMITGDQALTA---CYVASQ--------VHIVTKPVLILCPVKNGKVYEWVSPDET 738 (853)
Q Consensus 670 ~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA---~~VA~~--------~gI~~~~~~il~~~~~~~~~~~~~~~~~ 738 (853)
..+.++.|++.++++.|++.|+++.++||-....+ ...-+. .|+. -..
T Consensus 184 ~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~-------------------- 242 (301)
T 1ltq_A 184 CDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP-LVM-------------------- 242 (301)
T ss_dssp GGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC-CSE--------------------
T ss_pred ccccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCC-chh--------------------
Confidence 44678899999999999999999999999886543 333334 5662 111
Q ss_pred cccccchhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCE-EEEEcCCcccHHH
Q 003049 739 EKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRM-TLMCGDGTNDVGA 817 (853)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~-v~m~GDG~ND~~A 817 (853)
++++... -.+-.|+-|..+.+.+...... ++|+||..+|+.|
T Consensus 243 -------------------~~~~~~~------------------~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~ 285 (301)
T 1ltq_A 243 -------------------QCQREQG------------------DTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEM 285 (301)
T ss_dssp -------------------EEECCTT------------------CCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHH
T ss_pred -------------------eeeccCC------------------CCcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHH
Confidence 1111100 0123477778887877544434 6899999999999
Q ss_pred HHhCCce
Q 003049 818 LKQAHVG 824 (853)
Q Consensus 818 Lk~AdVG 824 (853)
-++|++-
T Consensus 286 a~~aG~~ 292 (301)
T 1ltq_A 286 WRRIGVE 292 (301)
T ss_dssp HHHTTCC
T ss_pred HHHcCCe
Confidence 9999984
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=94.37 E-value=0.03 Score=58.04 Aligned_cols=43 Identities=5% Similarity=0.026 Sum_probs=35.4
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcC---CChhhHHHHHHHcCcC
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITG---DQALTACYVASQVHIV 714 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTG---Dn~~TA~~VA~~~gI~ 714 (853)
.+.+-|+++++|++|++.|++++++|| ..........+++|+.
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~ 67 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE 67 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence 444557899999999999999999999 5666666777788885
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=94.26 E-value=0.045 Score=60.31 Aligned_cols=42 Identities=14% Similarity=0.219 Sum_probs=38.9
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
-++.|++.++++.|+++|+++.++|+-....+..+-+.+|+.
T Consensus 214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~ 255 (384)
T 1qyi_A 214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLL 255 (384)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCG
T ss_pred CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCCh
Confidence 467899999999999999999999999999999999999986
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=94.10 E-value=0.078 Score=54.40 Aligned_cols=102 Identities=15% Similarity=0.158 Sum_probs=65.0
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
.++.|++.+.++.|++.|+++.+.|+- ..+..+-+.+|+...
T Consensus 115 ~~~~p~~~~ll~~Lk~~g~~i~i~~~~--~~~~~~L~~~gl~~~------------------------------------ 156 (250)
T 4gib_A 115 NDILPGIESLLIDVKSNNIKIGLSSAS--KNAINVLNHLGISDK------------------------------------ 156 (250)
T ss_dssp GGSCTTHHHHHHHHHHTTCEEEECCSC--TTHHHHHHHHTCGGG------------------------------------
T ss_pred cccchhHHHHHHHHHhccccccccccc--chhhhHhhhcccccc------------------------------------
Confidence 467899999999999999998876654 346677788888632
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCc-eEEeccCC
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHV-GVALLNAV 831 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdV-GIAl~~~~ 831 (853)
.+.+++++.... ..-.|+-=..+++.|.-.-..++|+||..+|+.|-++|++ .|++.+..
T Consensus 157 --Fd~i~~~~~~~~-----------------~KP~p~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~ 217 (250)
T 4gib_A 157 --FDFIADAGKCKN-----------------NKPHPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNYE 217 (250)
T ss_dssp --CSEECCGGGCCS-----------------CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCTT
T ss_pred --cceeecccccCC-----------------CCCcHHHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECChh
Confidence 122222221110 0112222233344443333458999999999999999997 56664433
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=93.85 E-value=0.029 Score=54.59 Aligned_cols=42 Identities=14% Similarity=0.113 Sum_probs=35.9
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCC---------------ChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGD---------------QALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGD---------------n~~TA~~VA~~~gI~ 714 (853)
-++.|++.++|+.|++.|+++.++|+- ....+..+.+.+|+.
T Consensus 41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 97 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ 97 (176)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC
Confidence 467899999999999999999999997 355677788888874
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=93.76 E-value=0.053 Score=58.42 Aligned_cols=43 Identities=9% Similarity=0.144 Sum_probs=38.3
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHc----CcCCC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQV----HIVTK 716 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~----gI~~~ 716 (853)
.+.|++++.++.|++.|++|++|||-+......+|.++ ||..+
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e 189 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPE 189 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGG
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHH
Confidence 46889999999999999999999999999999999985 55543
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=93.69 E-value=0.059 Score=55.81 Aligned_cols=42 Identities=10% Similarity=0.150 Sum_probs=36.3
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEc---CCChhhHHHHHHHcCcCC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMIT---GDQALTACYVASQVHIVT 715 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miT---GDn~~TA~~VA~~~gI~~ 715 (853)
.++ |+++++|++|+++|++++++| |..........+++|+..
T Consensus 21 ~~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~ 65 (264)
T 3epr_A 21 SRI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVET 65 (264)
T ss_dssp EEC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCC
T ss_pred EEC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 356 899999999999999999999 777777888888888853
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=93.12 E-value=0.22 Score=50.15 Aligned_cols=41 Identities=5% Similarity=0.047 Sum_probs=37.5
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.++.|++.++++.|++.| ++.++|+-+...+..+.+.+|+.
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~ 135 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLW 135 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHH
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcH
Confidence 468999999999999999 99999999998899999998875
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=93.11 E-value=0.08 Score=54.80 Aligned_cols=42 Identities=14% Similarity=0.101 Sum_probs=37.4
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEc---CCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMIT---GDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miT---GDn~~TA~~VA~~~gI~ 714 (853)
.++-+++.++|++|++.|++++++| |..........+++|+.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 5667899999999999999999999 88888888888898885
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=92.87 E-value=0.08 Score=55.04 Aligned_cols=42 Identities=12% Similarity=0.047 Sum_probs=33.4
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhh---HHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALT---ACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~T---A~~VA~~~gI~ 714 (853)
.++-|++.++|+.|++.|+++.++||-.... ....-+.+|+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 4677999999999999999999999987443 33444666775
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=92.77 E-value=0.091 Score=54.52 Aligned_cols=39 Identities=3% Similarity=0.049 Sum_probs=34.0
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQV 711 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~ 711 (853)
.++.|++.++++.|++.|+++.++|.-+...+..+-+.+
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~ 167 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHS 167 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTB
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhh
Confidence 578999999999999999999999999988777766644
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=92.52 E-value=0.13 Score=52.39 Aligned_cols=40 Identities=8% Similarity=0.150 Sum_probs=33.0
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.++.|++.+.++.|++.|+++.++|... .+..+-+.+|+.
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~--~~~~~l~~~gl~ 133 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSL--NAPTILAALELR 133 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCT--THHHHHHHTTCG
T ss_pred ccccccHHHHHHhhhcccccceeccccc--chhhhhhhhhhc
Confidence 3578999999999999999999999754 356667778875
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=92.32 E-value=0.027 Score=56.69 Aligned_cols=33 Identities=12% Similarity=0.172 Sum_probs=27.0
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCCChhhHHHH
Q 003049 675 IREDSAKILSELKNSSQDLAMITGDQALTACYV 707 (853)
Q Consensus 675 lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~V 707 (853)
+++++.++++.|++.|+++.++|+-....+..+
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~ 121 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETV 121 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCH
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHH
Confidence 467899999999999999999999875544333
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=91.73 E-value=0.029 Score=57.66 Aligned_cols=45 Identities=18% Similarity=0.279 Sum_probs=33.6
Q ss_pred hHHHHHHHHHHcC---CEEEEEcC----CcccHHHHHhCCc-eEEeccCCCcCcc
Q 003049 790 QKELILTTFKAVG---RMTLMCGD----GTNDVGALKQAHV-GVALLNAVPPTQS 836 (853)
Q Consensus 790 qK~~iV~~Lq~~g---~~v~m~GD----G~ND~~ALk~AdV-GIAl~~~~~~~~~ 836 (853)
.|..-++.| .| ..|+++|| |.||.+||+.|+. |+||+++.+..++
T Consensus 188 ~Kg~al~~l--~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~vk~ 240 (246)
T 2amy_A 188 DKRYCLRHV--ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRI 240 (246)
T ss_dssp SGGGGGGGT--TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHH
T ss_pred chHHHHHHH--hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHHHHH
Confidence 466555555 33 46899999 9999999999987 9999999886443
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=90.83 E-value=0.043 Score=55.34 Aligned_cols=25 Identities=32% Similarity=0.311 Sum_probs=22.2
Q ss_pred CEEEEEcCC-cccHHHHHhCCceEEe
Q 003049 803 RMTLMCGDG-TNDVGALKQAHVGVAL 827 (853)
Q Consensus 803 ~~v~m~GDG-~ND~~ALk~AdVGIAl 827 (853)
..++|+||+ .||..|++.|++++++
T Consensus 194 ~~~i~iGD~~~nDi~~~~~aG~~~~~ 219 (250)
T 2c4n_A 194 EETVIVGDNLRTDILAGFQAGLETIL 219 (250)
T ss_dssp GGEEEEESCTTTHHHHHHHTTCEEEE
T ss_pred ceEEEECCCchhHHHHHHHcCCeEEE
Confidence 458999999 7999999999999665
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.16 E-value=0.62 Score=47.41 Aligned_cols=40 Identities=13% Similarity=0.055 Sum_probs=35.8
Q ss_pred CCcchHHHHHHHhhCCCcEEEEc---CCChhhHHHHHHHcCcC
Q 003049 675 IREDSAKILSELKNSSQDLAMIT---GDQALTACYVASQVHIV 714 (853)
Q Consensus 675 lr~~a~~~I~~L~~agi~v~miT---GDn~~TA~~VA~~~gI~ 714 (853)
+-+.+.++++.+++.|++++++| |..........+++|+.
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 55788999999999999999999 99998888888888875
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=88.50 E-value=0.34 Score=54.89 Aligned_cols=102 Identities=15% Similarity=0.137 Sum_probs=61.5
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCC---ChhhHHHHHHH-cCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhc
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGD---QALTACYVASQ-VHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVE 749 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGD---n~~TA~~VA~~-~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (853)
++.|++.++++.|++.|+++.++|+- .......+... .|+..
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~---------------------------------- 145 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKM---------------------------------- 145 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHT----------------------------------
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhh----------------------------------
Confidence 67899999999999999999999985 22222222221 13321
Q ss_pred cccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEecc
Q 003049 750 GLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLN 829 (853)
Q Consensus 750 ~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~ 829 (853)
..+.+++++....-. =.|+-=..+.+.+.-.-..++|+||..||+.|.++|++....-+
T Consensus 146 ----~fd~i~~~~~~~~~K-----------------P~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~~ 204 (555)
T 3i28_A 146 ----HFDFLIESCQVGMVK-----------------PEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQ 204 (555)
T ss_dssp ----TSSEEEEHHHHTCCT-----------------TCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEECS
T ss_pred ----heeEEEeccccCCCC-----------------CCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEEC
Confidence 123344444322111 11222233333333233458999999999999999999776654
Q ss_pred C
Q 003049 830 A 830 (853)
Q Consensus 830 ~ 830 (853)
.
T Consensus 205 ~ 205 (555)
T 3i28_A 205 D 205 (555)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=87.91 E-value=0.086 Score=54.29 Aligned_cols=44 Identities=18% Similarity=0.171 Sum_probs=36.3
Q ss_pred hHHHHHHHHHHcCCEEEEEcC----CcccHHHHHhCC-ceEEeccCCCc
Q 003049 790 QKELILTTFKAVGRMTLMCGD----GTNDVGALKQAH-VGVALLNAVPP 833 (853)
Q Consensus 790 qK~~iV~~Lq~~g~~v~m~GD----G~ND~~ALk~Ad-VGIAl~~~~~~ 833 (853)
.|..-++.|.+.-.-|+++|| |.||.+||+.|. +|++++++.+.
T Consensus 187 ~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~~ 235 (246)
T 3f9r_A 187 DKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKDT 235 (246)
T ss_dssp SGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHHH
T ss_pred CHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHHH
Confidence 677777777664567899999 799999999995 89999987765
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=84.30 E-value=0.65 Score=43.37 Aligned_cols=40 Identities=10% Similarity=-0.060 Sum_probs=34.1
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCCC---hhhHHHHHHHcCcC
Q 003049 675 IREDSAKILSELKNSSQDLAMITGDQ---ALTACYVASQVHIV 714 (853)
Q Consensus 675 lr~~a~~~I~~L~~agi~v~miTGDn---~~TA~~VA~~~gI~ 714 (853)
+-|++.++|++|++.|++++++||.+ ...+....++.|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 34689999999999999999999998 55667778888884
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=82.32 E-value=1.1 Score=45.90 Aligned_cols=43 Identities=12% Similarity=0.142 Sum_probs=35.7
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHH----cCcC
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQ----VHIV 714 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~----~gI~ 714 (853)
.++.-+++.++++.|++.|+++.++||....+...+++. +|+.
T Consensus 19 ~~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~ 65 (264)
T 1yv9_A 19 GKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIH 65 (264)
T ss_dssp TTEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCC
T ss_pred CCEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCC
Confidence 343347899999999999999999999998888877775 8875
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=80.82 E-value=1.1 Score=49.76 Aligned_cols=40 Identities=18% Similarity=0.172 Sum_probs=32.8
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCCCh------------hhHHHHHHHcCcC
Q 003049 675 IREDSAKILSELKNSSQDLAMITGDQA------------LTACYVASQVHIV 714 (853)
Q Consensus 675 lr~~a~~~I~~L~~agi~v~miTGDn~------------~TA~~VA~~~gI~ 714 (853)
+-|++.++|+.|+++|+++.++|+-+. ..+..+.+++|+.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~ 139 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP 139 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC
Confidence 679999999999999999999999651 2266777788873
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 853 | ||||
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 8e-16 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 4e-15 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 6e-13 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 1e-11 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 1e-06 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 0.003 |
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 77.9 bits (191), Expect = 8e-16
Identities = 29/350 (8%), Positives = 82/350 (23%), Gaps = 61/350 (17%)
Query: 488 CFDKTGTLTSDDMEFRGVVGLSNAELEDDMTK---VPVRTQEILASCHALVFVDNKLVGD 544
++ D+ R + + L + I+ S H + K +
Sbjct: 43 DWETLTDNDIQDI--RNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIH--LIDILKKLSH 98
Query: 545 PLEKAALKGI---DWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEEFFA 601
+A + + ++ + + L+ + V + +A
Sbjct: 99 DEIEAFMYQDEPVELKLQNISTNLAD---------CFNLNEQLPLQFLDNVKVGKNNIYA 149
Query: 602 FVKGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVEN 661
++ T S + + L K D+ ++
Sbjct: 150 ALEEFATTELHVSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVE---------KKIAR 200
Query: 662 GLTFAGFAVFNCPI--REDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVL 719
G+ + ++ +L++LK + +L + TG
Sbjct: 201 TTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFEN--------- 251
Query: 720 ILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPY 779
L + + + + + + + L +
Sbjct: 252 -LGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPF------------------SYIA 292
Query: 780 VKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAH---VGVA 826
+ + + GD D+ + ++ +G
Sbjct: 293 ALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTL 342
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 73.0 bits (178), Expect = 4e-15
Identities = 32/158 (20%), Positives = 44/158 (27%), Gaps = 25/158 (15%)
Query: 540 KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQ--- 596
GD E A LK S R + V F S K + +
Sbjct: 62 DTAGDASESALLK---CIELSCGSVRKMR---DRNPKVAEISFNSTNKYQLSIHEREDNP 115
Query: 597 EEFFAFVKGAPETIQDRLT-------------DLPSSYIETYKKYTHQGSRVLALAFKSL 643
+ +KGAPE I DR + ++ ++ Y + G RVL +L
Sbjct: 116 QSHVLVMKGAPERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNL 175
Query: 644 PDMTVSDARSLHRDE---VENGLTFAGFAVFNCPIRED 678
P DE L F G
Sbjct: 176 PSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 67.2 bits (163), Expect = 6e-13
Identities = 45/231 (19%), Positives = 63/231 (27%), Gaps = 48/231 (20%)
Query: 486 MCCFDKTGTLTSDDMEFR---------GVVGLSNAELEDDMTKVPVRTQEILASCHALVF 536
M DK EF G V ++ + V I A C+
Sbjct: 6 MFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSL 65
Query: 537 VDNKLVGD------PLEKAALK-----GIDWSYKSDEKAMPKRGGGNAV-----QIVQRH 580
N+ G E A + + + + + N+V +
Sbjct: 66 DFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTL 125
Query: 581 HFASHLKRMSVVVRVQEE------FFAFVKGAPETIQDRLT---------DLPSSYIETY 625
F+ K MSV + FVKGAPE + DR + E
Sbjct: 126 EFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKI 185
Query: 626 KK------YTHQGSRVLALAFKSLPDM--TVSDARSLHRDEVENGLTFAGF 668
R LALA + P + S E E LTF G
Sbjct: 186 LSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGV 236
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 61.7 bits (149), Expect = 1e-11
Identities = 32/154 (20%), Positives = 57/154 (37%), Gaps = 35/154 (22%)
Query: 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWV 733
P R++ + +++ + MITGD TA + ++ I + + G+ ++ +
Sbjct: 20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDL 79
Query: 734 SPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKEL 793
E + FARV P K
Sbjct: 80 PLAEQREACR-----------------------------------RACCFARVEPSHKSK 104
Query: 794 ILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVAL 827
I+ ++ +T M GDG ND ALK+A +G+A+
Sbjct: 105 IVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM 138
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 45.9 bits (108), Expect = 1e-06
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 28/138 (20%)
Query: 255 QTIMVHRCGKWV--KLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGG---SAIVNE 309
+ V+R + ++ D+VPGD+V + G+ VPAD+ IL + V++
Sbjct: 1 EMGKVYRADRKSVQRIKARDIVPGDIVEV-----AVGD--KVPADIRILSIKSTTLRVDQ 53
Query: 310 AILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLA 369
+ILTGES K + + + +DK ++LF GT I G L
Sbjct: 54 SILTGESVSVIKHT---EPVPDPRAVNQDKKNMLFSGTNIAA-------------GKALG 97
Query: 370 VVLRTGFETSQGKLMRTI 387
+V TG T GK+ +
Sbjct: 98 IVATTGVSTEIGKIRDQM 115
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 37.7 bits (86), Expect = 0.003
Identities = 9/45 (20%), Positives = 16/45 (35%)
Query: 782 VFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVA 826
+ K ++ + +M GD DV A K + + A
Sbjct: 141 TCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFA 185
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 853 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.97 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.93 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.91 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.88 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.83 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.72 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.63 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.82 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.65 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.65 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 98.61 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.58 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.44 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.38 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.37 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.36 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.35 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.19 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.15 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.15 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.11 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.01 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 97.76 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 97.31 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.11 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 96.91 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 96.72 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 96.69 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.42 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 96.26 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 95.75 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 95.64 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 95.63 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 95.55 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 94.77 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 94.45 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 94.4 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 93.89 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 93.74 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 92.01 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 91.85 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 91.85 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 91.04 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 90.19 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 89.97 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 89.94 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 88.58 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 88.0 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 86.03 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 84.47 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 83.39 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 82.18 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 80.94 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.97 E-value=1e-31 Score=262.05 Aligned_cols=145 Identities=26% Similarity=0.328 Sum_probs=127.6
Q ss_pred ecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcc
Q 003049 671 FNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEG 750 (853)
Q Consensus 671 ~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (853)
+-||+|+|++++|+.||++||+|+|+|||++.||.+||+++||...+..
T Consensus 17 ~~Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~------------------------------- 65 (168)
T d1wpga2 17 QLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEE------------------------------- 65 (168)
T ss_dssp CECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCC-------------------------------
T ss_pred ecCCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccc-------------------------------
Confidence 3399999999999999999999999999999999999999999854211
Q ss_pred ccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccC
Q 003049 751 LTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNA 830 (853)
Q Consensus 751 ~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~ 830 (853)
.....++|.+++.+.. .++.+.+++..||||++|+||..+|+.||+.|++|+|||||+||++|||+|||||||++|
T Consensus 66 ---v~~~~~~~~~~~~~~~-~~~~~~~~~~~v~ar~~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~~g 141 (168)
T d1wpga2 66 ---VADRAYTGREFDDLPL-AEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSG 141 (168)
T ss_dssp ---CTTTEEEHHHHHHSCH-HHHHHHHHHCCEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEETTS
T ss_pred ---cccccccccccchhhH-HHHhhhhhhhhhhhccchhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEeccc
Confidence 1233678888877655 566777888999999999999999999999999999999999999999999999999988
Q ss_pred CCcCcccccccccccccCCccC
Q 003049 831 VPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
++ .++.+++.++.+++|.+|
T Consensus 142 t~--~a~~aAdivl~~~~l~~v 161 (168)
T d1wpga2 142 TA--VAKTASEMVLADDNFSTI 161 (168)
T ss_dssp CH--HHHHTCSEEETTCCTHHH
T ss_pred cH--HHHHhCCEEEccCCHHHH
Confidence 87 488889999999988764
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.93 E-value=1e-26 Score=217.58 Aligned_cols=121 Identities=26% Similarity=0.275 Sum_probs=104.6
Q ss_pred cceeeEeeecCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccc
Q 003049 663 LTFAGFAVFNCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQ 742 (853)
Q Consensus 663 l~f~G~l~~~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~ 742 (853)
.+-.+.++++|++|++++++|+.|+++|++++|+|||++.||.++|++|||.
T Consensus 10 ~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~---------------------------- 61 (135)
T d2b8ea1 10 KTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD---------------------------- 61 (135)
T ss_dssp CCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS----------------------------
T ss_pred CceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh----------------------------
Confidence 3445578899999999999999999999999999999999999999999995
Q ss_pred cchhhhccccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCC
Q 003049 743 YSEKEVEGLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAH 822 (853)
Q Consensus 743 ~~~~~~~~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~Ad 822 (853)
.+|++++|++|..+|+.+|+. ++|+|+|||.||+|||++||
T Consensus 62 --------------------------------------~v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Ad 102 (135)
T d2b8ea1 62 --------------------------------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQAD 102 (135)
T ss_dssp --------------------------------------EEECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSS
T ss_pred --------------------------------------hhccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCC
Confidence 689999999999999999875 68999999999999999999
Q ss_pred ceEEeccCCCcCcccccccccccccCCccC
Q 003049 823 VGVALLNAVPPTQSGNSSSEASKDENTKSV 852 (853)
Q Consensus 823 VGIAl~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (853)
|||||+++++ .+++++|..+.+++|.+|
T Consensus 103 vgia~~~~~~--~~~~aADivl~~~~l~~i 130 (135)
T d2b8ea1 103 LGIAVGSGSD--VAVESGDIVLIRDDLRDV 130 (135)
T ss_dssp EEEEECCC----------SEEESSCCTHHH
T ss_pred eeeecCccCH--HHHHhCCEEEECCCHHHH
Confidence 9999998877 478889999999888764
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.91 E-value=2.7e-25 Score=200.96 Aligned_cols=109 Identities=34% Similarity=0.498 Sum_probs=93.1
Q ss_pred eEEEEECCEE--EEeecCCcCCCeEEEEcCCCCCCCCCceeecceeeecc---eeEEeeccCCCCccccccccccCCCCC
Q 003049 256 TIMVHRCGKW--VKLAGTDLVPGDVVSIGRSSGQTGEDKSVPADMLILGG---SAIVNEAILTGESTPQWKVSIMGRETG 330 (853)
Q Consensus 256 ~v~V~R~g~~--~~I~s~~LvpGDiV~l~~g~~d~~~~~~vPaD~ill~G---~~~VdES~LTGES~Pv~K~~~~~~~~~ 330 (853)
.++|+|+|++ ++|+++||+|||+|.|++|+ +|||||+|+++ ++.||||+|||||.|+.|.+.+.....
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~-------~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~ 74 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGD-------KVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPR 74 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTC-------BCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTT
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCC-------EEeeceEEEEeeccceEEEEeecccceEEEEeecccccccc
Confidence 5789999985 78999999999999999988 99999999864 478999999999999999864432221
Q ss_pred ccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEeeCcccchhHHHHHh
Q 003049 331 EKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTI 387 (853)
Q Consensus 331 ~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~tG~~T~~g~l~r~i 387 (853)
....++.|++|+||.|. +|.+.++|++||.+|.+|++.+++
T Consensus 75 ---~~~~~~~n~lf~GT~V~-------------~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 75 ---AVNQDKKNMLFSGTNIA-------------AGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp ---CCGGGCTTEECTTCEEE-------------ECEEEEEEEECGGGSHHHHHHHHH
T ss_pred ---cccccccceEEeccEEE-------------eeeEEEEEEEEccccHHHHHHHhC
Confidence 12235789999999999 599999999999999999998864
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.88 E-value=3.2e-28 Score=269.89 Aligned_cols=312 Identities=9% Similarity=-0.030 Sum_probs=206.3
Q ss_pred CcccCccccEEEeCCCCcccCCCeEEEEEEecCCCccccc----cCCCCHHHHHHHHHhccceeeCCcccCCHHHHHHHh
Q 003049 477 RIPFAGKVDMCCFDKTGTLTSDDMEFRGVVGLSNAELEDD----MTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALK 552 (853)
Q Consensus 477 ~i~~lG~vd~icfDKTGTLT~~~~~v~~i~~~~~~~~~~~----~~~~~~~~~~~la~chsl~~~~~~~~gdple~a~l~ 552 (853)
+.+.+|...++|+|||||+|.++|.+..+. .+..+.. .-+...+.....++||..... +..++|.+.+++.
T Consensus 32 s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~---~~~il~~~k~~g~n~~~dl~~~~~~~~~~~~~--~~~~~~~~~~~~~ 106 (380)
T d1qyia_ 32 DKCYLGLHSHIDWETLTDNDIQDIRNRIFQ---KDKILNKLKSLGLNSNWDMLFIVFSIHLIDIL--KKLSHDEIEAFMY 106 (380)
T ss_dssp CTTTTCCSCCCCGGGCCHHHHHHHHHHHHT---TTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHH--TTSCHHHHHHHHH
T ss_pred chhhcccceeeecCcccchhhhhheeeeec---chhhhHhhhhcCCChhHHHHHHHHHHHHHHHH--hhcCCCcHHHHHH
Confidence 457899999999999999999999764322 1100000 001123444556667643322 2467888888876
Q ss_pred hcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEEeCCE-EEEEEcCcHHHHHHhhccCChhHHHHHHHHHhc
Q 003049 553 GIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVRVQEE-FFAFVKGAPETIQDRLTDLPSSYIETYKKYTHQ 631 (853)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~~~~~-~~~~~KGapE~i~~~~~~ip~~~~~~~~~~~~~ 631 (853)
.....-.... .....+....+.||+|.+|+|+++....++ +..+.||++|.+.-.. .--..+......++++
T Consensus 107 ~~~~~~~~~~------~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~a~~ 179 (380)
T d1qyia_ 107 QDEPVELKLQ------NISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELHVSD-ATLFSLKGALWTLAQE 179 (380)
T ss_dssp CSSCHHHHHT------TSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTTCSC-CGGGSTTCHHHHHHHH
T ss_pred HHhhccchHH------HHHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcCCcH-HHHHHHHhHHHHHHHH
Confidence 5432100000 001223334467999999999876544222 3344566666553222 1123456677889999
Q ss_pred cceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeeecCCCCc--chHHHHHHHhhCCCcEEEEcCCChhhHHHHHH
Q 003049 632 GSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVFNCPIRE--DSAKILSELKNSSQDLAMITGDQALTACYVAS 709 (853)
Q Consensus 632 G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~~d~lr~--~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~ 709 (853)
|+|++++|++.++. .......++...|++..++++|| +++++|+.|+++|+++.|+|||++.+|..+++
T Consensus 180 ~~r~l~~~~~~~~~---------~~~~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~ 250 (380)
T d1qyia_ 180 VYQEWYLGSKLYED---------VEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFE 250 (380)
T ss_dssp HHHHHHHHHHHHHH---------HHCSCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHH
T ss_pred HHHHHHHhhhcccc---------cccccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHH
Confidence 99999999875431 01122345567899999999776 99999999999999999999999999999999
Q ss_pred HcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEehhhhHHhhcc--------hhHHhhcccce
Q 003049 710 QVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIGGDCFEMLQQT--------SAVLRVIPYVK 781 (853)
Q Consensus 710 ~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~itG~~l~~l~~~--------~~~~~~~~~~~ 781 (853)
++||.+. .....+++|++....... +.-...+..+.
T Consensus 251 ~lgl~~~------------------------------------F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~ 294 (380)
T d1qyia_ 251 NLGLLPY------------------------------------FEADFIATASDVLEAENMYPQARPLGKPNPFSYIAAL 294 (380)
T ss_dssp HHTCGGG------------------------------------SCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHH
T ss_pred HcCCccc------------------------------------CCcceEEecchhhhhhhhccccccccCCChHHHHHHH
Confidence 9999731 011224555543322110 00112233445
Q ss_pred EEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCC---ceEEec-cCCCcC--ccccccccccc
Q 003049 782 VFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAH---VGVALL-NAVPPT--QSGNSSSEASK 845 (853)
Q Consensus 782 VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~Ad---VGIAl~-~~~~~~--~~~~~~~~~~~ 845 (853)
+++|.+|+||..+++.++..++.|+|+|||.||++|+|+|| |||+|| .|++.. .+++.+|++..
T Consensus 295 ~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~ 364 (380)
T d1qyia_ 295 YGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVIN 364 (380)
T ss_dssp HCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEES
T ss_pred HHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEEC
Confidence 78999999999999999999999999999999999999999 999998 455542 12334555553
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.83 E-value=2.9e-21 Score=196.17 Aligned_cols=149 Identities=23% Similarity=0.277 Sum_probs=105.5
Q ss_pred HHHHHHHhccceeeCC---------cccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEecCCCCCCceEEEEE
Q 003049 524 TQEILASCHALVFVDN---------KLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHHFASHLKRMSVVVR 594 (853)
Q Consensus 524 ~~~~la~chsl~~~~~---------~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~F~s~~krmsvi~~ 594 (853)
...+.+.|+......+ ...|||+|.|++.++... ..+... ....+.++..+||+|.+|||+++++
T Consensus 37 l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~-~~~~~~-----~r~~~~~v~~~pF~S~rK~ms~v~~ 110 (214)
T d1q3ia_ 37 LSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELS-CGSVRK-----MRDRNPKVAEISFNSTNKYQLSIHE 110 (214)
T ss_dssp HHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHH-HSCHHH-----HHHTSCEEEEEC------CEEEEEE
T ss_pred HHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHh-CCCHHH-----HHhhCcEeeeEeeCCCCCEEEEEEE
Confidence 4456777887654321 468999999999876421 111000 0134678899999999999999998
Q ss_pred eC---CEEEEEEcCcHHHHHHhhccC---------C----hhHHHHHHHHHhccceEEEEEeeeCCCCChhhh---hhhc
Q 003049 595 VQ---EEFFAFVKGAPETIQDRLTDL---------P----SSYIETYKKYTHQGSRVLALAFKSLPDMTVSDA---RSLH 655 (853)
Q Consensus 595 ~~---~~~~~~~KGapE~i~~~~~~i---------p----~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~---~~~~ 655 (853)
.+ +++++|+|||||.|+++|+.+ . +.+.+.+++|+++|+||||+|||.++..+.... ....
T Consensus 111 ~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~ 190 (214)
T d1q3ia_ 111 REDNPQSHVLVMKGAPERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDE 190 (214)
T ss_dssp CSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCCCTTT
T ss_pred ccCCCCceeEEecCCHHHHHHhhhheeeCCceeechHHHHHHHHHHHHHHhhCCcEEEEEEEEecCccccccccccChhh
Confidence 73 458899999999999999642 1 457788899999999999999999976443222 2223
Q ss_pred HHhhhcCcceeeEeeecCCCCcc
Q 003049 656 RDEVENGLTFAGFAVFNCPIRED 678 (853)
Q Consensus 656 r~~~E~dl~f~G~l~~~d~lr~~ 678 (853)
.+..|+||+|+|+++++||+|+.
T Consensus 191 ~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 191 LNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp TSSCCSSEEEEEEEEEESCCSCC
T ss_pred hhhhcCCCEEEEEEEEEeCCCCC
Confidence 45678999999999999999975
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.72 E-value=1.8e-18 Score=178.41 Aligned_cols=147 Identities=24% Similarity=0.217 Sum_probs=103.3
Q ss_pred HHHHHHHhccceeeC----C--cccCCHHHHHHHhhcCceeccCcccccC-----------CCCCcceEEEEEecCCCCC
Q 003049 524 TQEILASCHALVFVD----N--KLVGDPLEKAALKGIDWSYKSDEKAMPK-----------RGGGNAVQIVQRHHFASHL 586 (853)
Q Consensus 524 ~~~~la~chsl~~~~----~--~~~gdple~a~l~~~~~~~~~~~~~~~~-----------~~~~~~~~i~~~~~F~s~~ 586 (853)
.+.+++.||...... + ...|||.|.|++.++... ..+...... ......++++..+||+|++
T Consensus 53 ll~~~~LCn~a~l~~~~~~~~~~~~G~pTE~ALl~~a~k~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~pF~S~r 131 (239)
T d1wpga3 53 LATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKM-NVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDR 131 (239)
T ss_dssp HHHHHHHSCSCEEEEETTTTEEEEESCHHHHHHHHHHHHH-CTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEEEETTT
T ss_pred HHHHHHhcCCCEeeecCCCCeEEEcCCCCcHHHHHHHHHh-CCChHHhhccchhhhhccchhhhhhhCeEEEEeeecccc
Confidence 456778899865532 2 467999999999876321 111000000 0002468899999999999
Q ss_pred CceEEEEEeCC------EEEEEEcCcHHHHHHhhccC---------C----hhHHHHHHHH--HhccceEEEEEeeeCCC
Q 003049 587 KRMSVVVRVQE------EFFAFVKGAPETIQDRLTDL---------P----SSYIETYKKY--THQGSRVLALAFKSLPD 645 (853)
Q Consensus 587 krmsvi~~~~~------~~~~~~KGapE~i~~~~~~i---------p----~~~~~~~~~~--~~~G~rvlala~k~l~~ 645 (853)
|||||+++.++ .+.+|+|||||.|+++|..+ . +.+.+..+.| +++|+||||+|||.++.
T Consensus 132 K~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A~k~~~~ 211 (239)
T d1wpga3 132 KSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPP 211 (239)
T ss_dssp TEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEEEESSCC
T ss_pred cEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHhhCCCEEEEEEEEECCc
Confidence 99999999854 36899999999999999642 1 2244455554 78999999999999985
Q ss_pred CChhhh--hhhcHHhhhcCcceeeEeee
Q 003049 646 MTVSDA--RSLHRDEVENGLTFAGFAVF 671 (853)
Q Consensus 646 ~~~~~~--~~~~r~~~E~dl~f~G~l~~ 671 (853)
...... ....++++|+||+|+|++++
T Consensus 212 ~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 212 KREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp CGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred ccccccccchhhHHHhcCCCEEEEEECC
Confidence 432211 23356789999999999986
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.63 E-value=1.2e-18 Score=197.61 Aligned_cols=226 Identities=12% Similarity=0.142 Sum_probs=157.0
Q ss_pred CCCccccccccc--cCCCCcHHHHHHHHHhcCCcccccCC-ccHHHHHHHHhhchhHHHHHhhhhhhcchh---------
Q 003049 150 YPTKETFGYYLK--CTGHSTEAKIAVATEKWGRNVFEYPQ-PTFQKLMKENCMEPFFVFQVFCVGLWCLDE--------- 217 (853)
Q Consensus 150 ~~~~~~~~~~~~--~~GLs~~~~~~~~~~~yG~N~~~~~~-~~~~~l~~~~~~~pf~vf~i~~~~lw~~~~--------- 217 (853)
.+.++.++.++. .+|||++ |+++|+++||+|+++.++ ++++++|++++.+|+.++.+++.++.+..+
T Consensus 7 ~~~e~v~~~l~td~~~GLs~~-ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~ 85 (472)
T d1wpga4 7 KSTEECLAYFGVSETTGLTPD-QVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGEETI 85 (472)
T ss_dssp SCHHHHHHHHTCCTTTCBCHH-HHHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCTTSTT
T ss_pred CCHHHHHHHhCcCcccCcCHH-HHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 345666777774 5799997 999999999999998765 789999999999999888777665544322
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhhhcCCceEEEEECCEEEEeecCCcCCCeEEEEcCCCCCCCCCce
Q 003049 218 -YWYYSLFTLFMLFMFESTMAKSRLKT---LTEIRRVRVDNQTIMVHRCGKWVKLAGTDLVPGDVVSIGRSSGQTGEDKS 293 (853)
Q Consensus 218 -y~~~s~~~l~~lv~~~~~~~~~~~k~---~~~l~~m~~~~~~v~V~R~g~~~~I~s~~LvpGDiV~l~~g~~d~~~~~~ 293 (853)
.|+.++++++++++......+|+.|+ ++++++|... . ..|| .
T Consensus 86 ~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~--~-------------------------~~~~-------~ 131 (472)
T d1wpga4 86 TAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPA--A-------------------------TEQD-------K 131 (472)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCC--C-------------------------CCCC-------C
T ss_pred hhHhHhhhhhheeeeeeeEEeEEechHHHHHHHHhhhccc--c-------------------------cccc-------C
Confidence 35566666666666666667777655 4444444221 0 2344 8
Q ss_pred eecceeeecceeEEeeccCCCCccccccccccCCCCCccccccCCCCeEEEeceEEeecCCCCCCCCCCCCCcEEEEEEe
Q 003049 294 VPADMLILGGSAIVNEAILTGESTPQWKVSIMGRETGEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLR 373 (853)
Q Consensus 294 vPaD~ill~G~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~lf~GT~v~q~~~~~~~~~~~~~g~~~~~V~~ 373 (853)
+|+|.+|.+ +||+.+.... +|..
T Consensus 132 ~P~d~~l~~----------~g~~i~~~~~-----------------------------------------------~~~~ 154 (472)
T d1wpga4 132 TPLQQKLDE----------FGEQLSKVIS-----------------------------------------------LICV 154 (472)
T ss_dssp CHHHHHHHH----------HHHHHHHHHH-----------------------------------------------HHHH
T ss_pred chHHHHHHH----------HHHHHHHHHH-----------------------------------------------HHHH
Confidence 999998765 4555432211 1223
Q ss_pred eCcccchhHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHhhhhhhcccCCCchhhHHHHHhheeeEeecCCCchHH
Q 003049 374 TGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLKKGMEDPTRSKYKLFLSCSLIITSVIPPELPME 453 (853)
Q Consensus 374 tG~~T~~g~l~r~i~~~~~~~~~~~~~~~~fi~~ll~~ai~~~~~~~~~~~~~~~~~~~~~~l~~~~ii~~~vP~~Lp~~ 453 (853)
||+.|..|++...+.... ..+.....++.++.++++++|++||+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~ai~l~V~~iPEgLp~~ 199 (472)
T d1wpga4 155 AVWLINIGHFNDPVHGGS-----------------------------------WIRGAIYYFKIAVALAVAAIPEGLPAV 199 (472)
T ss_dssp HHHHHCCTTSSSCCSSSC-----------------------------------SSSCGGGHHHHHHHHHHHHSCTTHHHH
T ss_pred HHHHHHHHHHHHHHhhhh-----------------------------------hHHHHHHHHHHHHHHHHHhChhhHHHH
Confidence 444444444322111000 011122334445556667899999999
Q ss_pred HHHHHHHHHHHHHhcceeccCCCCcccCccccEEEeCCC--CcccCCCeEE
Q 003049 454 LSIAVNTSLIALARRGIFCTEPFRIPFAGKVDMCCFDKT--GTLTSDDMEF 502 (853)
Q Consensus 454 lslav~~s~~~l~k~~I~~~~~~~i~~lG~vd~icfDKT--GTLT~~~~~v 502 (853)
++++.+.+..+|+|+++++|+..++|.+|+..+.|.||| +|||.+-+.+
T Consensus 200 vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n~~~v 250 (472)
T d1wpga4 200 ITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGEV 250 (472)
T ss_dssp HHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhhhHHHH
Confidence 999999999999999999999999999999999999998 9999875543
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.82 E-value=1.3e-09 Score=109.31 Aligned_cols=127 Identities=17% Similarity=0.142 Sum_probs=85.6
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
+++|++.++|+.||+.|++++++||.....+.++++.+||......-- .+.+....
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an-------~~~~~~~G----------------- 137 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFAN-------RLKFYFNG----------------- 137 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEE-------CEEECTTS-----------------
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeee-------eeeeeehh-----------------
Confidence 468999999999999999999999999999999999999963211100 00000000
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHc-C-CEEEEEcCCcccHHHHHhCCceEEeccCC
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAV-G-RMTLMCGDGTNDVGALKQAHVGVALLNAV 831 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~-g-~~v~m~GDG~ND~~ALk~AdVGIAl~~~~ 831 (853)
..+|... .---..+..|..+++.++.. + ..+.|+|||.||.+|++.|++|||++...
T Consensus 138 ----~~~g~~~-----------------~~p~~~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~ 196 (217)
T d1nnla_ 138 ----EYAGFDE-----------------TQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNV 196 (217)
T ss_dssp ----CEEEECT-----------------TSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSC
T ss_pred ----cccccee-----------------eeeeeccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCH
Confidence 0000000 00013467799999999763 2 35899999999999999999999997544
Q ss_pred CcCccccccccccc
Q 003049 832 PPTQSGNSSSEASK 845 (853)
Q Consensus 832 ~~~~~~~~~~~~~~ 845 (853)
.....++.++..+.
T Consensus 197 ~~~~~~~~ad~~i~ 210 (217)
T d1nnla_ 197 IRQQVKDNAKWYIT 210 (217)
T ss_dssp CCHHHHHHCSEEES
T ss_pred HHHHHHHhCCCEeC
Confidence 33233334444443
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.65 E-value=6.8e-09 Score=104.02 Aligned_cols=115 Identities=13% Similarity=0.070 Sum_probs=87.2
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCC---eEEEccCCCCceeEeecCCcccccccchhhhcc
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKP---VLILCPVKNGKVYEWVSPDETEKIQYSEKEVEG 750 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~---~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (853)
+++|++.+.++.|++.|+++.++||-....+..+.+++|+...- ....+ .+...
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~--~~~~~--------------------- 131 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFD--NDYIH--------------------- 131 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECS--SSBCE---------------------
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEe--CCcce---------------------
Confidence 57899999999999999999999999999999999999876320 00000 00000
Q ss_pred ccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccC
Q 003049 751 LTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNA 830 (853)
Q Consensus 751 ~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~ 830 (853)
..+. .......++.+|+.|..+++.++..++.|+|+||+.||.+|+++||+++|++..
T Consensus 132 --------~~~~--------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~ 189 (226)
T d2feaa1 132 --------IDWP--------------HSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYL 189 (226)
T ss_dssp --------EECT--------------TCCCTTCCSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHH
T ss_pred --------eccc--------------cccccccccCCHHHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecch
Confidence 0000 001123456789999999999999999999999999999999999999999865
Q ss_pred CCc
Q 003049 831 VPP 833 (853)
Q Consensus 831 ~~~ 833 (853)
.+.
T Consensus 190 ~~~ 192 (226)
T d2feaa1 190 LNE 192 (226)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.65 E-value=5.9e-08 Score=99.77 Aligned_cols=174 Identities=14% Similarity=0.148 Sum_probs=98.1
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCC-------CCceeEeecCCcc-------
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVK-------NGKVYEWVSPDET------- 738 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~-------~~~~~~~~~~~~~------- 738 (853)
..+-+.+.++|++|+++|++++++||.+...+..+.+++++..+...+...++ +...+.....+..
T Consensus 20 ~~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~~~~~~~~~~~i~~ 99 (271)
T d1rkqa_ 20 HTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEK 99 (271)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEeecccHHHHHHHHH
Confidence 35778899999999999999999999999999999999998765443332211 1100000000000
Q ss_pred ---------------c-cc---ccch------------------hhhccccCceeEEEehh--hhHHhhc--chhHHhhc
Q 003049 739 ---------------E-KI---QYSE------------------KEVEGLTDAHDLCIGGD--CFEMLQQ--TSAVLRVI 777 (853)
Q Consensus 739 ---------------~-~~---~~~~------------------~~~~~~~~~~~l~itG~--~l~~l~~--~~~~~~~~ 777 (853)
. .. .... ............++.++ .++...+ ...+....
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 179 (271)
T d1rkqa_ 100 LSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKY 179 (271)
T ss_dssp HHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHE
T ss_pred HHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhcce
Confidence 0 00 0000 00000001111222221 1111111 01111111
Q ss_pred c---cceEEEeeChh--hHHHHHHHHHHc-C---CEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccc
Q 003049 778 P---YVKVFARVAPE--QKELILTTFKAV-G---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKD 846 (853)
Q Consensus 778 ~---~~~VfAr~sP~--qK~~iV~~Lq~~-g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~ 846 (853)
. ...-+....|. .|...|+.+.+. | ..|+++|||.||.+||+.|+.|+||+++.++.++.+..++..+.
T Consensus 180 ~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~lk~~a~~i~~~~~ 257 (271)
T d1rkqa_ 180 TVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNL 257 (271)
T ss_dssp EEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTT
T ss_pred EEEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCC
Confidence 0 00012334554 699888888763 2 34899999999999999999999999999887666655554443
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=98.61 E-value=1.2e-08 Score=101.93 Aligned_cols=161 Identities=14% Similarity=0.100 Sum_probs=89.7
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCC----ceeEeecCCccccc--------
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNG----KVYEWVSPDETEKI-------- 741 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~----~~~~~~~~~~~~~~-------- 741 (853)
.+.+.+.++|++|+++|++++++||.+...+...++.+++... .+... +.. ....+.........
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~--~i~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGP--VVAED-GGAISYKKKRIFLASMDEEWILWNEIRKR 95 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSC--EEEGG-GTEEEETTEEEESCCCSHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcc--ccccc-ceeeeccccccccccccHHHHHHHHHHHh
Confidence 4678899999999999999999999999999999999988532 11111 000 00000000000000
Q ss_pred -ccchhhhccccCceeEEEehhh--hHHhhcchhHHhhcc-------cceEEEeeChhhHHHHHHHHHH-c---CCEEEE
Q 003049 742 -QYSEKEVEGLTDAHDLCIGGDC--FEMLQQTSAVLRVIP-------YVKVFARVAPEQKELILTTFKA-V---GRMTLM 807 (853)
Q Consensus 742 -~~~~~~~~~~~~~~~l~itG~~--l~~l~~~~~~~~~~~-------~~~VfAr~sP~qK~~iV~~Lq~-~---g~~v~m 807 (853)
+..............+.+.... .+.+. +.+.++-. ...+-.......|...++.+.+ . ...|+|
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~ 173 (230)
T d1wr8a_ 96 FPNARTSYTMPDRRAGLVIMRETINVETVR--EIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAH 173 (230)
T ss_dssp CTTCCBCTTGGGCSSCEEECTTTSCHHHHH--HHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEE
T ss_pred cccccceeecccceeeEEEecccccHHHHH--HHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheee
Confidence 0000000000111122222111 11111 01111111 1223333445678888777654 2 345999
Q ss_pred EcCCcccHHHHHhCCceEEeccCCCcCccccc
Q 003049 808 CGDGTNDVGALKQAHVGVALLNAVPPTQSGNS 839 (853)
Q Consensus 808 ~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~ 839 (853)
+|||.||.+||+.|++||||+++.+..++.++
T Consensus 174 iGD~~NDi~ml~~ag~~vav~na~~~~k~~A~ 205 (230)
T d1wr8a_ 174 VGDGENDLDAFKVVGYKVAVAQAPKILKENAD 205 (230)
T ss_dssp EECSGGGHHHHHHSSEEEECTTSCHHHHTTCS
T ss_pred eecCccHHHHHHHCCeEEEECCCCHHHHHhCC
Confidence 99999999999999999999999887444433
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.58 E-value=4.1e-08 Score=94.66 Aligned_cols=94 Identities=17% Similarity=0.145 Sum_probs=73.0
Q ss_pred HHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCceeEEEe
Q 003049 681 KILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDAHDLCIG 760 (853)
Q Consensus 681 ~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~it 760 (853)
.+|+.|++.|+.+.++||+....+...++++++.
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~---------------------------------------------- 72 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIK---------------------------------------------- 72 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC----------------------------------------------
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhccc----------------------------------------------
Confidence 4799999999999999999999999999999986
Q ss_pred hhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHH-HHcC---CEEEEEcCCcccHHHHHhCCceEEeccCCCcCcc
Q 003049 761 GDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTF-KAVG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQS 836 (853)
Q Consensus 761 G~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~L-q~~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~ 836 (853)
.++... ..|...++.+ ++.| ..|+++|||.||.++|+.|++|+|+++|.+..++
T Consensus 73 --------------------~~~~~~--~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~ 130 (177)
T d1k1ea_ 73 --------------------LFFLGK--LEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKN 130 (177)
T ss_dssp --------------------EEEESC--SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHT
T ss_pred --------------------cccccc--ccHHHHHHHHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcCCccHHHHH
Confidence 223322 3344444433 3334 5699999999999999999999999999987544
Q ss_pred cccccc
Q 003049 837 GNSSSE 842 (853)
Q Consensus 837 ~~~~~~ 842 (853)
.++.++
T Consensus 131 ~A~~Vt 136 (177)
T d1k1ea_ 131 AVDHVL 136 (177)
T ss_dssp TSSEEC
T ss_pred hCCEEe
Confidence 444333
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.44 E-value=4e-07 Score=90.83 Aligned_cols=162 Identities=10% Similarity=0.036 Sum_probs=87.8
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCC----CceeEeecCCccccccc----c
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKN----GKVYEWVSPDETEKIQY----S 744 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~----~~~~~~~~~~~~~~~~~----~ 744 (853)
..+.+++.+++++|++.|++++++||.+...+..+++.+|+... .+.. ++. .....+..........+ .
T Consensus 19 ~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~--~i~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (225)
T d1l6ra_ 19 RLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGP--VFGE-NGGIMFDNDGSIKKFFSNEGTNKFLEEMS 95 (225)
T ss_dssp SCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSC--EEEG-GGTEEECTTSCEEESSCSHHHHHHHHHHT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCce--EEee-cceEEEeCCccEEEecChHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999998532 1211 100 00011111110000000 0
Q ss_pred h-----hhhccccC--ceeEEEehhhhHHhhcchhHHhh-c--ccceEEEeeChhhHHHHHHHHHH-cC---CEEEEEcC
Q 003049 745 E-----KEVEGLTD--AHDLCIGGDCFEMLQQTSAVLRV-I--PYVKVFARVAPEQKELILTTFKA-VG---RMTLMCGD 810 (853)
Q Consensus 745 ~-----~~~~~~~~--~~~l~itG~~l~~l~~~~~~~~~-~--~~~~VfAr~sP~qK~~iV~~Lq~-~g---~~v~m~GD 810 (853)
. ........ ...+.+..+..+.+........+ + ....+--.-....|...++.|.+ .| ..|+++||
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GD 175 (225)
T d1l6ra_ 96 KRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGD 175 (225)
T ss_dssp TTSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECC
T ss_pred HhcCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecC
Confidence 0 00000000 11112222222222210000000 0 00011111223478888887754 33 34889999
Q ss_pred CcccHHHHHhCCceEEeccCCCcCccc
Q 003049 811 GTNDVGALKQAHVGVALLNAVPPTQSG 837 (853)
Q Consensus 811 G~ND~~ALk~AdVGIAl~~~~~~~~~~ 837 (853)
|.||.+|+++|++||||+++.+..+..
T Consensus 176 s~nD~~m~~~a~~~vav~na~~~~k~~ 202 (225)
T d1l6ra_ 176 SNNDMPMFQLPVRKACPANATDNIKAV 202 (225)
T ss_dssp SGGGHHHHTSSSEEEECTTSCHHHHHH
T ss_pred CcchHHHHHHCCeEEEECCCcHHHHHh
Confidence 999999999999999999998864433
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.38 E-value=9.4e-07 Score=91.07 Aligned_cols=62 Identities=26% Similarity=0.272 Sum_probs=48.9
Q ss_pred eeChh--hHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccc
Q 003049 785 RVAPE--QKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKD 846 (853)
Q Consensus 785 r~sP~--qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~ 846 (853)
.+.|. .|..-++.+.+ .| ..|+++|||.||.+||+.|+.||||++|++..++.++..+..++
T Consensus 206 di~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A~~v~~~~~ 273 (285)
T d1nrwa_ 206 ELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTND 273 (285)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGG
T ss_pred EEecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCC
Confidence 45565 79988888865 34 35999999999999999999999999999876666655555444
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.37 E-value=1.2e-06 Score=87.58 Aligned_cols=43 Identities=12% Similarity=0.165 Sum_probs=39.1
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.+...+.++++|++|+++|+.++++||.++..+..+.+++++.
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~ 57 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCC
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhccc
Confidence 4455678999999999999999999999999999999999985
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.36 E-value=3.6e-07 Score=93.58 Aligned_cols=63 Identities=17% Similarity=0.112 Sum_probs=49.6
Q ss_pred EeeChh--hHHHHHHHHHH-cCC---EEEEEcCCcccHHHHHhCCceEEeccCCCcCcccccccccccc
Q 003049 784 ARVAPE--QKELILTTFKA-VGR---MTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKD 846 (853)
Q Consensus 784 Ar~sP~--qK~~iV~~Lq~-~g~---~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~ 846 (853)
-.+.|. .|..-++.|.+ .|. .|+++|||.||.+||+.|+.||||++|++..++.+..++..++
T Consensus 182 ~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~~v~~~~~ 250 (269)
T d1rlma_ 182 IDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNN 250 (269)
T ss_dssp EEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGG
T ss_pred EEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCC
Confidence 355664 59999988865 443 4899999999999999999999999999887666665555444
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.35 E-value=5.2e-07 Score=87.79 Aligned_cols=111 Identities=16% Similarity=0.133 Sum_probs=79.3
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
+..+.....++.++ .+.+++.+|+........++...++....... +.+...
T Consensus 69 ~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~---------l~~~~~------------------ 120 (206)
T d1rkua_ 69 KPLEGAVEFVDWLR-ERFQVVILSDTFYEFSQPLMRQLGFPTLLCHK---------LEIDDS------------------ 120 (206)
T ss_dssp CCCTTHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEE---------EEECTT------------------
T ss_pred cccchHHHHHHHhh-cCceEEEeccCchHHHHHHHHHhCCchhhcce---------eeeecc------------------
Confidence 45667777777665 68999999999999999999999886321100 000000
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCCCc
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPP 833 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~ 833 (853)
..........+.-+...++.++.....|+|+|||.||.+||+.|++|||| ++.+.
T Consensus 121 ------------------------~~~~~~~~~~~~~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAm-na~~~ 175 (206)
T d1rkua_ 121 ------------------------DRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF-HAPEN 175 (206)
T ss_dssp ------------------------SCEEEEECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE-SCCHH
T ss_pred ------------------------cccccccccchhhHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEE-CCCHH
Confidence 01123444566667778888888889999999999999999999999999 56554
Q ss_pred Cccc
Q 003049 834 TQSG 837 (853)
Q Consensus 834 ~~~~ 837 (853)
.+.+
T Consensus 176 v~~~ 179 (206)
T d1rkua_ 176 VIRE 179 (206)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 3433
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.19 E-value=1.3e-06 Score=89.66 Aligned_cols=40 Identities=8% Similarity=0.132 Sum_probs=36.8
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCc
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHI 713 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI 713 (853)
++-+.+.++|++|++.|++++++||.+...+..+++++++
T Consensus 28 ~i~~~~~~al~~l~~~Gi~v~i~TGR~~~~~~~~~~~l~~ 67 (283)
T d2b30a1 28 KVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENL 67 (283)
T ss_dssp CSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHH
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCc
Confidence 5778899999999999999999999999999999988764
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.15 E-value=1.6e-06 Score=88.42 Aligned_cols=61 Identities=26% Similarity=0.359 Sum_probs=46.9
Q ss_pred eeChh--hHHHHHHHHHH-cC---CEEEEEcCCcccHHHHHhCCceEEeccCCCcCccccccccccc
Q 003049 785 RVAPE--QKELILTTFKA-VG---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASK 845 (853)
Q Consensus 785 r~sP~--qK~~iV~~Lq~-~g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~ 845 (853)
.+.|. .|..-++.|.+ .| ..++++|||.||.+||+.|+.||||++|.+..++.++.++..+
T Consensus 179 ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~~vt~~~ 245 (260)
T d2rbka1 179 DVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPI 245 (260)
T ss_dssp EEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCG
T ss_pred EEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHHHHHhCCEEeCCC
Confidence 44454 69888887755 33 4588999999999999999999999999988666555554443
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.15 E-value=6.4e-07 Score=87.31 Aligned_cols=129 Identities=18% Similarity=0.136 Sum_probs=79.8
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccc
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGL 751 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (853)
..++.+++.+.++.++..|..++++||.....+....++.++...-...+. +....
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~--------------- 128 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLI---------VKDGK--------------- 128 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEE---------EETTE---------------
T ss_pred hhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhc---------ccccc---------------
Confidence 357888999999999999999999999999999999999887632100000 00000
Q ss_pred cCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCC
Q 003049 752 TDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAV 831 (853)
Q Consensus 752 ~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~ 831 (853)
...... .....+...+.-...+.+.++-....+.|+|||.||.+|++.|++|||| ++.
T Consensus 129 -----~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-na~ 186 (210)
T d1j97a_ 129 -----LTGDVE----------------GEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAK 186 (210)
T ss_dssp -----EEEEEE----------------CSSCSTTHHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-SCC
T ss_pred -----cccccc----------------ccccccccccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE-CCC
Confidence 000000 0000001111222233333333345689999999999999999999999 777
Q ss_pred CcCcccccccccccccC
Q 003049 832 PPTQSGNSSSEASKDEN 848 (853)
Q Consensus 832 ~~~~~~~~~~~~~~~~~ 848 (853)
+..++ .++.++...+
T Consensus 187 ~~lk~--~Ad~vi~~~d 201 (210)
T d1j97a_ 187 PILKE--KADICIEKRD 201 (210)
T ss_dssp HHHHT--TCSEEECSSC
T ss_pred HHHHH--hCCEEEcCCC
Confidence 65444 3455554433
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.11 E-value=6.6e-06 Score=83.98 Aligned_cols=63 Identities=19% Similarity=0.334 Sum_probs=48.8
Q ss_pred eeChh--hHHHHHHHHHH-cCC---EEEEEcCCcccHHHHHhCCceEEeccCCCcCccccccccccccc
Q 003049 785 RVAPE--QKELILTTFKA-VGR---MTLMCGDGTNDVGALKQAHVGVALLNAVPPTQSGNSSSEASKDE 847 (853)
Q Consensus 785 r~sP~--qK~~iV~~Lq~-~g~---~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~~~~~~~~~~~~~ 847 (853)
.++|. .|...|+.|.+ .|. .|+++|||.||.+||+.|++||||++|+++.++.++.++..+++
T Consensus 183 di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A~~i~~~~~~ 251 (267)
T d1nf2a_ 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNND 251 (267)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTT
T ss_pred eecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCc
Confidence 35554 69998887765 342 48899999999999999999999999999866666666554443
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.01 E-value=5.4e-05 Score=74.37 Aligned_cols=43 Identities=9% Similarity=0.156 Sum_probs=39.3
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~ 715 (853)
..+-+.++++|++|+++|+.++++||.+...+..+.+++|+..
T Consensus 20 ~~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~ 62 (232)
T d1xvia_ 20 SYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG 62 (232)
T ss_dssp CCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccCC
Confidence 3467889999999999999999999999999999999999853
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.76 E-value=4.5e-05 Score=76.31 Aligned_cols=49 Identities=29% Similarity=0.424 Sum_probs=41.0
Q ss_pred ChhhHHHHHHHHHHc-C---CEEEEEcCCcccHHHHHhCCceEEeccCCCcCc
Q 003049 787 APEQKELILTTFKAV-G---RMTLMCGDGTNDVGALKQAHVGVALLNAVPPTQ 835 (853)
Q Consensus 787 sP~qK~~iV~~Lq~~-g---~~v~m~GDG~ND~~ALk~AdVGIAl~~~~~~~~ 835 (853)
....|...++.|.+. | ..|+++|||.||.+||+.|+.|++|+++.+..+
T Consensus 159 ~~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk 211 (244)
T d1s2oa1 159 QRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELL 211 (244)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHH
T ss_pred CccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHHHH
Confidence 455799999888764 3 338889999999999999999999999888753
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=97.31 E-value=0.00048 Score=62.32 Aligned_cols=128 Identities=12% Similarity=0.140 Sum_probs=82.7
Q ss_pred EEEEEecCCCccccccCCCCHHHHHHHHHhccceeeCCcccCCHHHHHHHhhcCceeccCcccccCCCCCcceEEEEEec
Q 003049 502 FRGVVGLSNAELEDDMTKVPVRTQEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAMPKRGGGNAVQIVQRHH 581 (853)
Q Consensus 502 v~~i~~~~~~~~~~~~~~~~~~~~~~la~chsl~~~~~~~~gdple~a~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 581 (853)
+..+.+.++ .+.+.++.+|++.. ..+.||+.+|+++++.......... ....-..-.+
T Consensus 4 ~td~ip~~G---------~~~~ell~~AA~aE------~~SeHPlakAIv~~Ak~~~~~~~~~-------~~~~~~~~~~ 61 (136)
T d2a29a1 4 ASEFIPAQG---------VDEKTLADAAQLAS------LADETPEGRSIVILAKQRFNLRERD-------VQSLHATFVP 61 (136)
T ss_dssp EEEEEECTT---------CCHHHHHHHHHHHH------HTCCSHHHHHHHHHHHHHHCCCCCC-------TTTTTCEEEE
T ss_pred cceEEeCCC---------CCHHHHHHHHHHHh------CCCCchHHHHHHHHHHHhcCCCccc-------cccccccccc
Confidence 566776554 34555555555543 3567999999999875332111000 0001112235
Q ss_pred CCCCCCceEEEEEeCCEEEEEEcCcHHHHHHhh----ccCChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHH
Q 003049 582 FASHLKRMSVVVRVQEEFFAFVKGAPETIQDRL----TDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRD 657 (853)
Q Consensus 582 F~s~~krmsvi~~~~~~~~~~~KGapE~i~~~~----~~ip~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~ 657 (853)
|....+...+ ..+++ .+.+|++..+...+ ..+|++..+..+.+..+|.+++.+|.
T Consensus 62 ~~~~~~~~g~--~~~g~--~v~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va~----------------- 120 (136)
T d2a29a1 62 FTAQSRMSGI--NIDNR--MIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVE----------------- 120 (136)
T ss_dssp EETTTTEEEE--EETTE--EEEEECHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEEE-----------------
T ss_pred cccccceEEE--EECCE--EEEecHHHHHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEEE-----------------
Confidence 5444432222 23444 45569998877655 46799999999999999999999986
Q ss_pred hhhcCcceeeEeeecCCCC
Q 003049 658 EVENGLTFAGFAVFNCPIR 676 (853)
Q Consensus 658 ~~E~dl~f~G~l~~~d~lr 676 (853)
|-+++|++.+.|++|
T Consensus 121 ----d~~~~G~i~l~D~iK 135 (136)
T d2a29a1 121 ----GSRVLGVIALKDIVK 135 (136)
T ss_dssp ----TTEEEEEEEEEESSC
T ss_pred ----CCEEEEEEEEEeecC
Confidence 558999999999998
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.11 E-value=0.00069 Score=65.77 Aligned_cols=97 Identities=10% Similarity=0.057 Sum_probs=69.0
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
++.|++.++++.|++.|+++.++|+.....+..+.+..|+..-
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~------------------------------------- 130 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDS------------------------------------- 130 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG-------------------------------------
T ss_pred cccchHHHHHHHhhhcccccccccccccccccccccccccccc-------------------------------------
Confidence 4579999999999999999999999999999999999999631
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceE
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGV 825 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGI 825 (853)
.+-+++++... .+.-.|+-=..+++.+.-....++|+||..+|..|-+.|++..
T Consensus 131 -F~~i~~~~~~~-----------------~~Kp~~~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~ 184 (218)
T d1te2a_ 131 -FDALASAEKLP-----------------YSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRS 184 (218)
T ss_dssp -CSEEEECTTSS-----------------CCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEE
T ss_pred -ccccccccccc-----------------cchhhHHHHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEE
Confidence 11122222110 0111222233444555444456999999999999999999754
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=96.91 E-value=0.00038 Score=68.39 Aligned_cols=42 Identities=19% Similarity=0.170 Sum_probs=37.8
Q ss_pred CCCcchHHHHHHHhhCC-CcEEEEcCCChhhHHHHHHHcCcCC
Q 003049 674 PIREDSAKILSELKNSS-QDLAMITGDQALTACYVASQVHIVT 715 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~ag-i~v~miTGDn~~TA~~VA~~~gI~~ 715 (853)
++-|++.+++++|++.| +++.++||.....+..+.+..||..
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~ 133 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDH 133 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCST
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccc
Confidence 34689999999999987 8999999999999999999999973
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=96.72 E-value=0.0011 Score=64.24 Aligned_cols=100 Identities=20% Similarity=0.197 Sum_probs=70.6
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
++.|++.++++.|++.|+++.++||.....+..+.+++||..--..+
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~--------------------------------- 141 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEM--------------------------------- 141 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEE---------------------------------
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhcccc---------------------------------
Confidence 46899999999999999999999999999999999999986321111
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCc-eEEec
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHV-GVALL 828 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdV-GIAl~ 828 (853)
+++.... ...-.|+--..+.+.++-....++|+||..+|..+-+.|++ .|.+.
T Consensus 142 -----~~~~~~~-----------------~~kp~p~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~ 195 (224)
T d2hsza1 142 -----LGGQSLP-----------------EIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLT 195 (224)
T ss_dssp -----ECTTTSS-----------------SCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred -----ccccccc-----------------cccccchhhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEe
Confidence 1111000 00112333344555555555679999999999999999997 44444
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.69 E-value=0.001 Score=68.08 Aligned_cols=47 Identities=11% Similarity=0.116 Sum_probs=42.3
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEE
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLI 720 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~i 720 (853)
+||+++++.++.|++.|+.+.++||--......+++++|+...+..+
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I 181 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKV 181 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEE
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceE
Confidence 48999999999999999999999999999999999999997554333
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.42 E-value=0.0014 Score=62.94 Aligned_cols=102 Identities=14% Similarity=0.160 Sum_probs=67.4
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
++.|+++++++.|++.|+++.++|+-.. .+..+-+..||..-
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~------------------------------------- 123 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESY------------------------------------- 123 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGG-------------------------------------
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccc-------------------------------------
Confidence 4679999999999999999999998544 56778888998632
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCce-EEeccCC
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVG-VALLNAV 831 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVG-IAl~~~~ 831 (853)
.+.+++++... ...-.|+-=..+++.+.-....++|+||+.+|..+-++|++. |.+..++
T Consensus 124 -f~~i~~s~~~~-----------------~~Kp~~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~ 184 (204)
T d2go7a1 124 -FTEILTSQSGF-----------------VRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST 184 (204)
T ss_dssp -EEEEECGGGCC-----------------CCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS
T ss_pred -ccccccccccc-----------------ccchhHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEcCCC
Confidence 11122211100 011133333444444443345799999999999999999984 4454443
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.26 E-value=0.00047 Score=67.49 Aligned_cols=45 Identities=18% Similarity=0.276 Sum_probs=37.4
Q ss_pred hHHHHHHHHHHc-CCEEEEEcC----CcccHHHHHhCC-ceEEeccCCCcC
Q 003049 790 QKELILTTFKAV-GRMTLMCGD----GTNDVGALKQAH-VGVALLNAVPPT 834 (853)
Q Consensus 790 qK~~iV~~Lq~~-g~~v~m~GD----G~ND~~ALk~Ad-VGIAl~~~~~~~ 834 (853)
.|..-++.|.+. ...|.++|| |.||.+||++|. .|+||+++.|..
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~ 235 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTV 235 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHH
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHHH
Confidence 688888888663 456899999 569999999997 699999988763
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=95.75 E-value=0.0041 Score=59.64 Aligned_cols=99 Identities=14% Similarity=0.155 Sum_probs=67.4
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
++.|++.++++.|++ ++++.++|+-....+..+.++.|+...
T Consensus 82 ~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~------------------------------------- 123 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMR------------------------------------- 123 (207)
T ss_dssp EECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGG-------------------------------------
T ss_pred ccccchhhhhhhhcc-ccccccccccccccccccccccccccc-------------------------------------
Confidence 467899999999975 799999999999999999999998632
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEec
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALL 828 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~ 828 (853)
.+.+++++.... ..=.|+--..+++.++-.-..++|+||..+|..|-++|++...+.
T Consensus 124 -f~~i~~~~~~~~-----------------~KP~p~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v 180 (207)
T d2hdoa1 124 -MAVTISADDTPK-----------------RKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLA 180 (207)
T ss_dssp -EEEEECGGGSSC-----------------CTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEE
T ss_pred -cccccccccccc-----------------chhhhhhhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEE
Confidence 122222221100 011233333444444322256899999999999999999876653
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=95.64 E-value=0.0051 Score=61.03 Aligned_cols=103 Identities=14% Similarity=0.082 Sum_probs=70.6
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTD 753 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (853)
++.|++.++++.|++.|+++.++||.+...+..+-+..|+..-..
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~----------------------------------- 143 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKP----------------------------------- 143 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCC-----------------------------------
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhccccc-----------------------------------
Confidence 578999999999999999999999999999999999999863200
Q ss_pred ceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHc-CCEEEEEcCCcccHHHHHhCCc-eEEeccC
Q 003049 754 AHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAV-GRMTLMCGDGTNDVGALKQAHV-GVALLNA 830 (853)
Q Consensus 754 ~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~-g~~v~m~GDG~ND~~ALk~AdV-GIAl~~~ 830 (853)
+..++++.. -...-.|+.=...++.|.-. ...++|+||..+|+.|=+.|++ .|++..|
T Consensus 144 --d~~~~~d~~-----------------~~~KP~p~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G 203 (257)
T d1swva_ 144 --DFLVTPDDV-----------------PAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILG 203 (257)
T ss_dssp --SCCBCGGGS-----------------SCCTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTT
T ss_pred --ccccccccc-----------------cccccChHHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccC
Confidence 001111110 00112333344455555432 3568999999999999999997 3455444
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.63 E-value=0.0079 Score=55.61 Aligned_cols=95 Identities=7% Similarity=0.020 Sum_probs=63.2
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCC-hhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQ-ALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn-~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
++.|++.++++.|++.|+++.++|+-+ +..+...-+..++.....
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~---------------------------------- 91 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFI---------------------------------- 91 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccce----------------------------------
Confidence 578999999999999999999999654 455666666666542100
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEeeChh--hHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCc-eEEecc
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPE--QKELILTTFKAVGRMTLMCGDGTNDVGALKQAHV-GVALLN 829 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~--qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdV-GIAl~~ 829 (853)
.+...-.|. .-..+.+.+.-....++|+||..+|+.|-++|.+ .|.+..
T Consensus 92 ----------------------------~~~~~~kp~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i~v~~ 143 (164)
T d1u7pa_ 92 ----------------------------QREIYPGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRD 143 (164)
T ss_dssp ----------------------------EEEESSSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSS
T ss_pred ----------------------------eeecccCCChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEEEEECC
Confidence 122222333 2233334433334569999999999999999987 444444
Q ss_pred C
Q 003049 830 A 830 (853)
Q Consensus 830 ~ 830 (853)
|
T Consensus 144 G 144 (164)
T d1u7pa_ 144 G 144 (164)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.55 E-value=0.0065 Score=58.08 Aligned_cols=100 Identities=19% Similarity=0.139 Sum_probs=69.4
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhcccc
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLT 752 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (853)
.++.+++.+.++.|+..+ ++.++|+.....+..+.+.+|+..--
T Consensus 83 ~~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~f----------------------------------- 126 (210)
T d2ah5a1 83 AQLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFF----------------------------------- 126 (210)
T ss_dssp CEECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGC-----------------------------------
T ss_pred ccchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccc-----------------------------------
Confidence 356799999999999775 89999999999999999999986320
Q ss_pred CceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCc-eEEeccC
Q 003049 753 DAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHV-GVALLNA 830 (853)
Q Consensus 753 ~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdV-GIAl~~~ 830 (853)
+.++++.. .....|+--..+++.++-....++|+||+.||..|-++|++ .|++..|
T Consensus 127 ---d~v~~~~~-------------------~~~~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g 183 (210)
T d2ah5a1 127 ---DGIYGSSP-------------------EAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWG 183 (210)
T ss_dssp ---SEEEEECS-------------------SCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSS
T ss_pred ---cccccccc-------------------cccccccccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCC
Confidence 11111110 11233444444444444344568999999999999999998 5666443
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=94.77 E-value=0.013 Score=56.92 Aligned_cols=43 Identities=2% Similarity=0.003 Sum_probs=38.9
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
.-.+.||+.+++++|++.|+++.++|+..........+.+|+.
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~ 167 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEG 167 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTB
T ss_pred ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcc
Confidence 3456899999999999999999999999999998888888875
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=94.45 E-value=0.012 Score=56.44 Aligned_cols=41 Identities=12% Similarity=0.222 Sum_probs=34.3
Q ss_pred hHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCceEEeccCC
Q 003049 790 QKELILTTFKAVGRMTLMCGDGTNDVGALKQAHVGVALLNAV 831 (853)
Q Consensus 790 qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdVGIAl~~~~ 831 (853)
.|..-++.|.+.. .++++||+.||.+||+.|+-|+||..|.
T Consensus 159 ~Kg~al~~l~~~~-~~i~~GDs~ND~~Mf~~~~~~~av~~g~ 199 (229)
T d1u02a_ 159 NKGSAIRSVRGER-PAIIAGDDATDEAAFEANDDALTIKVGE 199 (229)
T ss_dssp CHHHHHHHHHTTS-CEEEEESSHHHHHHHHTTTTSEEEEESS
T ss_pred CHHHHHHHHhccc-cceeecCCCChHHHHhccCCeEEEEeCC
Confidence 6999999998765 4678899999999999998887776553
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=94.40 E-value=0.035 Score=51.93 Aligned_cols=40 Identities=10% Similarity=0.174 Sum_probs=33.5
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
++.|++++.++.|++.|+++.++|+-+..+ ..+-+.+|+.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~-~~~l~~~~l~ 118 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQV-LEILEKTSIA 118 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHH-HHHHHHTTCG
T ss_pred cccchhHHHHHHHHhhhccccccccCccch-hhhhhhhccc
Confidence 567999999999999999999999866544 5567788875
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=93.89 E-value=0.085 Score=50.71 Aligned_cols=40 Identities=18% Similarity=0.192 Sum_probs=36.2
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
++.||+.++++.|+ .++++.++|+........+.+.+|+.
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~ 139 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIK 139 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCG
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccc
Confidence 56899999999997 47999999999999999999999986
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=93.74 E-value=0.036 Score=49.62 Aligned_cols=30 Identities=7% Similarity=0.096 Sum_probs=27.4
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCCh
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQA 701 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~ 701 (853)
++++.|++.+.++.|++.|++++++||-+.
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~ 63 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRES 63 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCC
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcH
Confidence 567899999999999999999999999864
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=92.01 E-value=0.17 Score=48.37 Aligned_cols=25 Identities=8% Similarity=0.191 Sum_probs=22.9
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITG 698 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTG 698 (853)
.+-|++.++|+.|+++|++++++|-
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTN 72 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTN 72 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEE
T ss_pred EecccHHHHHHHHHhhCCeEEEecc
Confidence 3678999999999999999999994
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=91.85 E-value=0.17 Score=46.98 Aligned_cols=27 Identities=19% Similarity=0.284 Sum_probs=24.1
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCCCh
Q 003049 675 IREDSAKILSELKNSSQDLAMITGDQA 701 (853)
Q Consensus 675 lr~~a~~~I~~L~~agi~v~miTGDn~ 701 (853)
+-|++.++++.|+++|++++++|.-..
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~ 54 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSG 54 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTH
T ss_pred ECCCHHHHHHHHhhcCchhhhhhccch
Confidence 448999999999999999999998763
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=91.85 E-value=0.94 Score=38.27 Aligned_cols=47 Identities=11% Similarity=0.097 Sum_probs=42.0
Q ss_pred cCcHHHHHHhhccCChhHHHHHHHHHhccceEEEEEeeeCCCCChhhhhhhcHHhhhcCcceeeEeee
Q 003049 604 KGAPETIQDRLTDLPSSYIETYKKYTHQGSRVLALAFKSLPDMTVSDARSLHRDEVENGLTFAGFAVF 671 (853)
Q Consensus 604 KGapE~i~~~~~~ip~~~~~~~~~~~~~G~rvlala~k~l~~~~~~~~~~~~r~~~E~dl~f~G~l~~ 671 (853)
-|+++.+.+....+|+.+.+....+..+|..++.++. |-..+|++++
T Consensus 66 vG~~~~~~~~~~~~~~~~~~~~~~~~~~G~T~v~va~---------------------d~~~~G~ial 112 (113)
T d2b8ea2 66 VGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVAR---------------------NGRVEGIIAV 112 (113)
T ss_dssp EECHHHHHHTTCCCCHHHHHHHHHHHTTTCEEEEEEE---------------------TTEEEEEEEE
T ss_pred ECcHHHHHhcCCCCCHHHHHHHHHHHhCCCeEEEEEE---------------------CCEEEEEEEE
Confidence 3999999998888999999999999999999999987 4578888876
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=91.04 E-value=0.31 Score=46.87 Aligned_cols=40 Identities=18% Similarity=0.204 Sum_probs=36.3
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
++.|++.++++.|++ ++++.++|+.+.......-+.+|+.
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~ 148 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQ 148 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCG
T ss_pred ccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhcccc
Confidence 467999999999985 7899999999999999999999986
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=90.19 E-value=0.11 Score=49.29 Aligned_cols=42 Identities=7% Similarity=0.282 Sum_probs=35.0
Q ss_pred cCCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCC
Q 003049 672 NCPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVT 715 (853)
Q Consensus 672 ~d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~ 715 (853)
..++-|++.+.++.|++.|+++.++|+.+. +..+.+..|+..
T Consensus 89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~ 130 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTG 130 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGG
T ss_pred cccccCCceeccccccccccceEEEeecch--hhHHHHhhcccc
Confidence 345778999999999999999999998754 567778888863
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=89.97 E-value=0.11 Score=49.39 Aligned_cols=40 Identities=15% Similarity=0.230 Sum_probs=33.9
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCCC----hhhHHHHHHHcCcC
Q 003049 675 IREDSAKILSELKNSSQDLAMITGDQ----ALTACYVASQVHIV 714 (853)
Q Consensus 675 lr~~a~~~I~~L~~agi~v~miTGDn----~~TA~~VA~~~gI~ 714 (853)
+.|++.+.++.+++.|++|+-|||.. ..|+...-+.+|+.
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p 130 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIP 130 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCC
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCC
Confidence 56899999999999999999999964 34667777778886
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=89.94 E-value=0.29 Score=47.71 Aligned_cols=35 Identities=11% Similarity=0.243 Sum_probs=31.9
Q ss_pred cchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHc
Q 003049 677 EDSAKILSELKNSSQDLAMITGDQALTACYVASQV 711 (853)
Q Consensus 677 ~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~ 711 (853)
+++.++|++|+++|++++.+|+....+...+++++
T Consensus 21 ~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 21 PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 78999999999999999999999988888887765
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=88.58 E-value=0.19 Score=47.36 Aligned_cols=102 Identities=14% Similarity=0.166 Sum_probs=64.5
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCC----ChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhc
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGD----QALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVE 749 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGD----n~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (853)
.+.|++.+.++.|++.|+++.++|+- ............|+.+-
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~--------------------------------- 143 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQH--------------------------------- 143 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGG---------------------------------
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhh---------------------------------
Confidence 46799999999999999999999962 33334444555555421
Q ss_pred cccCceeEEEehhhhHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHHHcCCEEEEEcCCcccHHHHHhCCc-eEEec
Q 003049 750 GLTDAHDLCIGGDCFEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFKAVGRMTLMCGDGTNDVGALKQAHV-GVALL 828 (853)
Q Consensus 750 ~~~~~~~l~itG~~l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq~~g~~v~m~GDG~ND~~ALk~AdV-GIAl~ 828 (853)
.+.+++++.... ..=.|+--...++.++-.-..++|+||..+|+.+-++|.+ +|-+.
T Consensus 144 -----fd~i~~s~~~~~-----------------~KP~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~ 201 (222)
T d1cr6a1 144 -----FDFLIESCQVGM-----------------IKPEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVH 201 (222)
T ss_dssp -----CSEEEEHHHHSC-----------------CTTCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECC
T ss_pred -----hceeeehhhccC-----------------CCCChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEEC
Confidence 123333322110 1123444455555555444568999999999999999997 45443
Q ss_pred cC
Q 003049 829 NA 830 (853)
Q Consensus 829 ~~ 830 (853)
++
T Consensus 202 ~~ 203 (222)
T d1cr6a1 202 NT 203 (222)
T ss_dssp SS
T ss_pred Cc
Confidence 33
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=88.00 E-value=0.62 Score=43.55 Aligned_cols=42 Identities=19% Similarity=0.178 Sum_probs=37.5
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~ 714 (853)
..+.+++.++++.|++.++++.++|+-+.......-+..++.
T Consensus 92 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~ 133 (220)
T d1zrna_ 92 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLR 133 (220)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred ccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhcccc
Confidence 345789999999999999999999999999999888888776
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.03 E-value=0.14 Score=48.15 Aligned_cols=32 Identities=13% Similarity=0.033 Sum_probs=26.7
Q ss_pred CCCcchHHHHHHHhhCCCcEEEEcCCChhhHH
Q 003049 674 PIREDSAKILSELKNSSQDLAMITGDQALTAC 705 (853)
Q Consensus 674 ~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~ 705 (853)
++.+++.+.++.|++.|+++.++|+.....+.
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~ 130 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRA 130 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCST
T ss_pred CCCccHHHHHHHHHhccCccccccccchhhHH
Confidence 46789999999999999999999976554443
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=84.47 E-value=1.2 Score=43.03 Aligned_cols=42 Identities=14% Similarity=0.120 Sum_probs=30.8
Q ss_pred CCCCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHH---HHcCcC
Q 003049 673 CPIREDSAKILSELKNSSQDLAMITGDQALTACYVA---SQVHIV 714 (853)
Q Consensus 673 d~lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA---~~~gI~ 714 (853)
+.+=|++.++|+.|+++|++++.+|+-...+...++ +++|+.
T Consensus 18 ~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~ 62 (250)
T d2c4na1 18 NVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp TEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred CCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccc
Confidence 333378999999999999999999965544444443 456764
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=83.39 E-value=0.17 Score=48.44 Aligned_cols=141 Identities=20% Similarity=0.168 Sum_probs=80.0
Q ss_pred CCcchHHHHHHHhhCCCcEEEEcCCChhhHHHHHHHcCcCCCCeEEEccCCCCceeEeecCCcccccccchhhhccccCc
Q 003049 675 IREDSAKILSELKNSSQDLAMITGDQALTACYVASQVHIVTKPVLILCPVKNGKVYEWVSPDETEKIQYSEKEVEGLTDA 754 (853)
Q Consensus 675 lr~~a~~~I~~L~~agi~v~miTGDn~~TA~~VA~~~gI~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (853)
+=||+.++++.+++. ..+.++|---..-+.++|+.+|+..+ +.--+.+ .| ..+.+.....++.+.
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e-~~~T~~~----------lD---~~~~p~ee~e~ll~i 146 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGE-LHGTEVD----------FD---SIAVPEGLREELLSI 146 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSE-EEEEBCC----------GG---GCCCCHHHHHHHHHH
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCce-eeccccc----------cc---ccCCChHHHHHHHHH
Confidence 458999999999876 78888888888999999999999521 1111000 00 011111111111111
Q ss_pred eeEEEeh--hh----hHHhhcchhHHhhcccceEEEeeChhhHHHHHHHHH-HcCCE-EEEEcCCcccHHHHHhCCc--e
Q 003049 755 HDLCIGG--DC----FEMLQQTSAVLRVIPYVKVFARVAPEQKELILTTFK-AVGRM-TLMCGDGTNDVGALKQAHV--G 824 (853)
Q Consensus 755 ~~l~itG--~~----l~~l~~~~~~~~~~~~~~VfAr~sP~qK~~iV~~Lq-~~g~~-v~m~GDG~ND~~ALk~AdV--G 824 (853)
.+...+| +. ++.+..+-+..+++..++.... ..|..+++..- ..|.. .+.+||.+.|+.+|+.|.= |
T Consensus 147 ~~~~~d~~~eel~e~~d~~f~~~e~~~i~e~Vk~VGg---g~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gG 223 (308)
T d1y8aa1 147 IDVIASLSGEELFRKLDELFSRSEVRKIVESVKAVGA---GEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGG 223 (308)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHSHHHHHHHHTCBCCCH---HHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTC
T ss_pred hhhccCccHHHHHHHHHHHhccchHhhHHhhhcccCC---chhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCC
Confidence 1111111 11 1222223455666666665533 56666665432 23322 3567999999999998854 7
Q ss_pred EEec-cCCCc
Q 003049 825 VALL-NAVPP 833 (853)
Q Consensus 825 IAl~-~~~~~ 833 (853)
+|++ ||-+-
T Consensus 224 laIsFNGN~Y 233 (308)
T d1y8aa1 224 VAIAFNGNEY 233 (308)
T ss_dssp EEEEESCCHH
T ss_pred eeEEecCccc
Confidence 8777 76643
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=82.18 E-value=1.2 Score=43.10 Aligned_cols=47 Identities=13% Similarity=0.130 Sum_probs=35.2
Q ss_pred EeeChhhHHHHHHHHHHcCCEEEEEcCCcc-cHHHHHhCCc-eEEeccC
Q 003049 784 ARVAPEQKELILTTFKAVGRMTLMCGDGTN-DVGALKQAHV-GVALLNA 830 (853)
Q Consensus 784 Ar~sP~qK~~iV~~Lq~~g~~v~m~GDG~N-D~~ALk~AdV-GIAl~~~ 830 (853)
+.=+|+--..+.+.++-.-..++|+||..+ |..+-++|.+ +|.+.+|
T Consensus 179 gKP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G 227 (253)
T d1wvia_ 179 GKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTG 227 (253)
T ss_dssp STTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSS
T ss_pred ccCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCC
Confidence 344566656666666555567999999976 9999999998 7777655
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=80.94 E-value=1.4 Score=42.59 Aligned_cols=38 Identities=18% Similarity=0.239 Sum_probs=29.7
Q ss_pred cchHHHHHHHhhCCCcEEEEcCCChhhHHHH---HHHcCcC
Q 003049 677 EDSAKILSELKNSSQDLAMITGDQALTACYV---ASQVHIV 714 (853)
Q Consensus 677 ~~a~~~I~~L~~agi~v~miTGDn~~TA~~V---A~~~gI~ 714 (853)
|++.++|++|++.|++++++|+....+...+ .++.|+.
T Consensus 26 ~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~~~g~~ 66 (261)
T d1vjra_ 26 PGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 66 (261)
T ss_dssp TTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred chHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhhccc
Confidence 7899999999999999999996555555444 4456764
|