Citrus Sinensis ID: 003074
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 850 | 2.2.26 [Sep-21-2011] | |||||||
| P53536 | 1003 | Alpha-1,4 glucan phosphor | N/A | no | 0.990 | 0.839 | 0.793 | 0.0 | |
| P27598 | 955 | Alpha-1,4 glucan phosphor | N/A | no | 0.969 | 0.862 | 0.797 | 0.0 | |
| P04045 | 966 | Alpha-1,4 glucan phosphor | N/A | no | 0.971 | 0.855 | 0.784 | 0.0 | |
| Q9LIB2 | 962 | Alpha-glucan phosphorylas | yes | no | 0.949 | 0.838 | 0.778 | 0.0 | |
| P53535 | 974 | Alpha-1,4 glucan phosphor | N/A | no | 0.98 | 0.855 | 0.752 | 0.0 | |
| Q9SD76 | 841 | Alpha-glucan phosphorylas | no | no | 0.475 | 0.480 | 0.665 | 1e-165 | |
| P53537 | 842 | Alpha-glucan phosphorylas | N/A | no | 0.491 | 0.496 | 0.646 | 1e-164 | |
| P32811 | 838 | Alpha-glucan phosphorylas | N/A | no | 0.471 | 0.478 | 0.646 | 1e-163 | |
| Q9LKJ3 | 832 | Alpha-glucan phosphorylas | N/A | no | 0.471 | 0.481 | 0.641 | 1e-162 | |
| Q00766 | 853 | Glycogen phosphorylase 1 | yes | no | 0.462 | 0.460 | 0.501 | 1e-115 |
| >sp|P53536|PHSL_VICFA Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic OS=Vicia faba GN=PHO1 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 1408 bits (3645), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 677/853 (79%), Positives = 758/853 (88%), Gaps = 11/853 (1%)
Query: 1 MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDS 60
MEFLQGRALLNAIGNL LTG YAEALS+L LE+V QEPDAALGNGGLGRLASCFLDS
Sbjct: 157 MEFLQGRALLNAIGNLELTGPYAEALSQLSYKLEDVAHQEPDAALGNGGLGRLASCFLDS 216
Query: 61 MATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKI 120
+ATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLE+GNPWEI RNDVSYPV+FYGK+
Sbjct: 217 LATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLEMGNPWEIVRNDVSYPVRFYGKV 276
Query: 121 VPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTK 180
V GSDGK HW+GGEDIKAVA+D+PIPGYKT++TINLRLWST SE+FDL+AFN+G HT+
Sbjct: 277 VSGSDGKKHWVGGEDIKAVAHDVPIPGYKTRSTINLRLWSTKAASEEFDLNAFNSGRHTE 336
Query: 181 AAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEF 240
A+EAL NAEKICYILYPGDES+EGK LRLKQQYTLCSASLQDIIARFE+RSGA+VNWE+F
Sbjct: 337 ASEALANAEKICYILYPGDESIEGKTLRLKQQYTLCSASLQDIIARFERRSGASVNWEDF 396
Query: 241 PEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSF 300
PEKVAVQMNDTHPTLCIPEL+RILID+KGLSWK+AWNITQRTVAYTNHTVLPEALEKWS
Sbjct: 397 PEKVAVQMNDTHPTLCIPELMRILIDIKGLSWKDAWNITQRTVAYTNHTVLPEALEKWSM 456
Query: 301 ELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLF 360
+LM+KLLPRH+EIIEMIDEEL+ TI++EYGTAD DLL+K+LKE RILENV+LPA FAD+
Sbjct: 457 DLMEKLLPRHVEIIEMIDEELIRTIIAEYGTADSDLLDKKLKEMRILENVELPAEFADIL 516
Query: 361 VKTKESTDVVPDD---ELENCDEEGGPVDEELESAQEDGVLEEESTDVVPDDELENC-DE 416
VKTKE+TD+ ++ E +EE + E +++ E D +DE+E E
Sbjct: 517 VKTKEATDISSEEVQISKEGGEEEETSKEGGEEEEEKEVGGGREEGDDGKEDEVEKAIAE 576
Query: 417 EGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEIVTN 476
+ G V + +++ K E V PP+LVRMANLCVVG HAVNGVAEIHSEIV +
Sbjct: 577 KDGTVKSSIGDKKK-------KLPEPVPVPPKLVRMANLCVVGGHAVNGVAEIHSEIVKD 629
Query: 477 EVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKF 536
+VFN FYKLWPEKFQNKTNGVTPRRWIRFCNPDLS I+T W+GTEDW+ NT KLAELRKF
Sbjct: 630 DVFNAFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSKIITQWIGTEDWILNTEKLAELRKF 689
Query: 537 ADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIV 596
ADNEDLQ+Q+R AKRNNK+KV +F++E+TGYSVSPD+MFDIQVKRIHEYKRQL+NI GIV
Sbjct: 690 ADNEDLQTQWREAKRNNKVKVAAFLRERTGYSVSPDSMFDIQVKRIHEYKRQLLNIFGIV 749
Query: 597 YRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLL 656
YRYKKMKEM+A ERK FVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLL
Sbjct: 750 YRYKKMKEMNAAERKENFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLL 809
Query: 657 KVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIR 716
KVIFVPDYNVSVAE+LIPASELSQHISTAGMEASGTSNMKFAMNGC+ IGTLDGANVEIR
Sbjct: 810 KVIFVPDYNVSVAEMLIPASELSQHISTAGMEASGTSNMKFAMNGCLQIGTLDGANVEIR 869
Query: 717 QEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSL 776
+EVG +NFFLFGA+A EI GLRKER+ GKFVPD RFEEVKKFV+SGVFGSYNYDEL+GSL
Sbjct: 870 EEVGADNFFLFGAKAREIVGLRKERARGKFVPDPRFEEVKKFVRSGVFGSYNYDELIGSL 929
Query: 777 EGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQE 836
EGNEGFG+ADYFLVG+DFPSYLECQE+VD+AY DQK+WTRMSI+NTAGSSKFSSDRTI E
Sbjct: 930 EGNEGFGRADYFLVGQDFPSYLECQEEVDKAYRDQKKWTRMSILNTAGSSKFSSDRTIHE 989
Query: 837 YARDIWNIIPVEL 849
YAR+IWNI PV+L
Sbjct: 990 YAREIWNIEPVKL 1002
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The L isoform exhibits higher affinity for unbranched substrates such as glucan-like amylose and maltodextrin. Vicia faba (taxid: 3906) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1 |
| >sp|P27598|PHSL_IPOBA Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic OS=Ipomoea batatas PE=2 SV=1 | Back alignment and function description |
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| >sp|P04045|PHSL1_SOLTU Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic OS=Solanum tuberosum PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9LIB2|PHS1_ARATH Alpha-glucan phosphorylase 1 OS=Arabidopsis thaliana GN=PHS1 PE=1 SV=1 | Back alignment and function description |
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| >sp|P53535|PHSL2_SOLTU Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic OS=Solanum tuberosum GN=STP-1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9SD76|PHS2_ARATH Alpha-glucan phosphorylase 2, cytosolic OS=Arabidopsis thaliana GN=PHS2 PE=2 SV=1 | Back alignment and function description |
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| >sp|P53537|PHSH_VICFA Alpha-glucan phosphorylase, H isozyme OS=Vicia faba PE=2 SV=1 | Back alignment and function description |
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| >sp|P32811|PHSH_SOLTU Alpha-glucan phosphorylase, H isozyme OS=Solanum tuberosum PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9LKJ3|PHSH_WHEAT Alpha-glucan phosphorylase, H isozyme OS=Triticum aestivum PE=2 SV=1 | Back alignment and function description |
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| >sp|Q00766|PHS1_DICDI Glycogen phosphorylase 1 OS=Dictyostelium discoideum GN=glpV PE=1 SV=3 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 850 | ||||||
| 255570250 | 977 | glycogen phosphorylase, putative [Ricinu | 0.972 | 0.846 | 0.808 | 0.0 | |
| 224077696 | 949 | predicted protein [Populus trichocarpa] | 0.985 | 0.883 | 0.804 | 0.0 | |
| 211906528 | 935 | alpha-1,4 glucan phosphorylase [Gossypiu | 0.982 | 0.893 | 0.803 | 0.0 | |
| 356551144 | 978 | PREDICTED: alpha-1,4 glucan phosphorylas | 0.967 | 0.840 | 0.810 | 0.0 | |
| 2506470 | 1003 | RecName: Full=Alpha-1,4 glucan phosphory | 0.990 | 0.839 | 0.793 | 0.0 | |
| 130172 | 955 | RecName: Full=Alpha-1,4 glucan phosphory | 0.969 | 0.862 | 0.797 | 0.0 | |
| 359489019 | 982 | PREDICTED: alpha-1,4 glucan phosphorylas | 0.976 | 0.845 | 0.809 | 0.0 | |
| 356573281 | 922 | PREDICTED: alpha-1,4 glucan phosphorylas | 0.968 | 0.892 | 0.809 | 0.0 | |
| 228312 | 955 | starch phosphorylase | 0.969 | 0.862 | 0.795 | 0.0 | |
| 130173 | 966 | RecName: Full=Alpha-1,4 glucan phosphory | 0.971 | 0.855 | 0.784 | 0.0 |
| >gi|255570250|ref|XP_002526085.1| glycogen phosphorylase, putative [Ricinus communis] gi|223534582|gb|EEF36279.1| glycogen phosphorylase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1437 bits (3720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 689/852 (80%), Positives = 755/852 (88%), Gaps = 25/852 (2%)
Query: 1 MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDS 60
MEFLQGRALLNA+GNL LTGAYAEAL+KLG +LENV QEPDAALGNGGLGRLASCFLDS
Sbjct: 149 MEFLQGRALLNAVGNLELTGAYAEALTKLGHNLENVARQEPDAALGNGGLGRLASCFLDS 208
Query: 61 MATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKI 120
+ATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLE+GNPWEI RNDV+YPVKFYGK+
Sbjct: 209 LATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLEMGNPWEIVRNDVAYPVKFYGKV 268
Query: 121 VPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTK 180
V GSDG+ HWIGGEDIKAVAYD+PIPGYKTK+TINLRLWST P+ED DLSAFN+GDHTK
Sbjct: 269 VSGSDGRKHWIGGEDIKAVAYDVPIPGYKTKSTINLRLWSTKAPAEDLDLSAFNSGDHTK 328
Query: 181 AAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEF 240
A E L NAEKIC+ILYPGD+SVEGK+LRLKQQYTLCSASLQDII RFE+RSG++V WEEF
Sbjct: 329 AYETLANAEKICHILYPGDDSVEGKILRLKQQYTLCSASLQDIIVRFERRSGSHVKWEEF 388
Query: 241 PEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSF 300
PEKVAVQMNDTHPTLCIPEL+RIL+DLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWS
Sbjct: 389 PEKVAVQMNDTHPTLCIPELMRILMDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSL 448
Query: 301 ELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLF 360
+LMQKLLPRH+EIIEMIDEEL+ TIVSEYG D DLL K+LKE RILENVDLP FADL
Sbjct: 449 DLMQKLLPRHVEIIEMIDEELIRTIVSEYGREDLDLLNKKLKEMRILENVDLPDAFADLI 508
Query: 361 VKTKESTDVVPDDELENCDEEGGPVDE--ELESAQEDGVLEEESTDVVPDDELENCDEEG 418
+KTKES+ E E+ D+E V+E ELES +E E + DELEN + +
Sbjct: 509 IKTKESSAASTTKEPEDADDEIKLVNEKDELESKEES----ENKDEAERKDELENKNTQ- 563
Query: 419 GPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEV 478
+KE V+ PP++VRMANLCVVG HAVNGVAEIHSEIV +EV
Sbjct: 564 ------------------KKEKAVVEPPPKMVRMANLCVVGGHAVNGVAEIHSEIVKDEV 605
Query: 479 FNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFAD 538
FN FY+LWP+KFQNKTNGVTPRRWIRFCNPDLS I+T W G+EDWV NT KLAELRKF+D
Sbjct: 606 FNVFYQLWPKKFQNKTNGVTPRRWIRFCNPDLSKIITDWTGSEDWVLNTEKLAELRKFSD 665
Query: 539 NEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYR 598
NEDLQ+Q+RAAKR+NKMKVV IKEKTGYSVS DAMFDIQVKRIHEYKRQL+NILGIVYR
Sbjct: 666 NEDLQTQWRAAKRSNKMKVVQLIKEKTGYSVSTDAMFDIQVKRIHEYKRQLLNILGIVYR 725
Query: 599 YKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKV 658
YKKMKEMSA ERK ++VPRVCIFGGKAFATY+QAKRIVKFITDVGATVNHDPEIGDLLKV
Sbjct: 726 YKKMKEMSAAERKKEYVPRVCIFGGKAFATYLQAKRIVKFITDVGATVNHDPEIGDLLKV 785
Query: 659 IFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQE 718
+FVP+YNVSVAELLIPASELSQHISTAGMEASGTSNMKF+MNGC+LIGTLDGANVEIR+E
Sbjct: 786 VFVPNYNVSVAELLIPASELSQHISTAGMEASGTSNMKFSMNGCVLIGTLDGANVEIRKE 845
Query: 719 VGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEG 778
VGE+NFFLFGA+AHEIAGLRKER+EGKFVPD RFEEVK+FV+SGVFG+Y+YDEL+GSLEG
Sbjct: 846 VGEDNFFLFGAKAHEIAGLRKERAEGKFVPDPRFEEVKEFVRSGVFGTYDYDELLGSLEG 905
Query: 779 NEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYA 838
NEGFG+ DYFLVGKDFPSYLECQEKVD+AY DQKRWT+MSIMNTAGS FSSDRTI EYA
Sbjct: 906 NEGFGRGDYFLVGKDFPSYLECQEKVDKAYRDQKRWTKMSIMNTAGSYYFSSDRTIHEYA 965
Query: 839 RDIWNIIPVELP 850
RDIWNI PV LP
Sbjct: 966 RDIWNIEPVILP 977
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224077696|ref|XP_002305367.1| predicted protein [Populus trichocarpa] gi|222848331|gb|EEE85878.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|211906528|gb|ACJ11757.1| alpha-1,4 glucan phosphorylase [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
| >gi|356551144|ref|XP_003543938.1| PREDICTED: alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|2506470|sp|P53536.2|PHSL_VICFA RecName: Full=Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic; AltName: Full=Starch phosphorylase L; Flags: Precursor gi|1616637|emb|CAA85354.1| alpha-1,4 glucan phosphorylase, L isoform precursor [Vicia faba var. minor] | Back alignment and taxonomy information |
|---|
| >gi|130172|sp|P27598.1|PHSL_IPOBA RecName: Full=Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic; AltName: Full=Starch phosphorylase L; Flags: Precursor gi|168276|gb|AAA63271.1| starch phosphorylase [Ipomoea batatas] | Back alignment and taxonomy information |
|---|
| >gi|359489019|ref|XP_002279075.2| PREDICTED: alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic-like [Vitis vinifera] gi|296082990|emb|CBI22291.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356573281|ref|XP_003554791.1| PREDICTED: alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|228312|prf||1802404A starch phosphorylase | Back alignment and taxonomy information |
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| >gi|130173|sp|P04045.2|PHSL1_SOLTU RecName: Full=Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic; AltName: Full=Starch phosphorylase L-1; Flags: Precursor gi|217999|dbj|BAA00407.1| alpha-glucan phosphorylase precursor [Solanum tuberosum] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 850 | ||||||
| UNIPROTKB|P04045 | 966 | P04045 "Alpha-1,4 glucan phosp | 0.470 | 0.414 | 0.865 | 0.0 | |
| UNIPROTKB|P53535 | 974 | STP-1 "Alpha-1,4 glucan phosph | 0.472 | 0.412 | 0.840 | 0.0 | |
| TAIR|locus:2093787 | 962 | PHS1 "alpha-glucan phosphoryla | 0.472 | 0.417 | 0.858 | 0.0 | |
| TAIR|locus:2075576 | 841 | PHS2 "alpha-glucan phosphoryla | 0.471 | 0.476 | 0.669 | 2.9e-262 | |
| DICTYBASE|DDB_G0281383 | 853 | glpV "glycogen phosphorylase b | 0.462 | 0.460 | 0.503 | 2.3e-196 | |
| ASPGD|ASPL0000059322 | 879 | AN1015 [Emericella nidulans (t | 0.462 | 0.447 | 0.501 | 1.6e-193 | |
| DICTYBASE|DDB_G0291123 | 993 | glpD "glycogen phosphorylase a | 0.451 | 0.386 | 0.489 | 8e-192 | |
| UNIPROTKB|G4MW66 | 888 | MGG_01819 "Phosphorylase" [Mag | 0.464 | 0.444 | 0.485 | 4.4e-191 | |
| CGD|CAL0001970 | 900 | GPH1 [Candida albicans (taxid: | 0.461 | 0.435 | 0.474 | 3e-181 | |
| UNIPROTKB|Q5AFP7 | 900 | GPH1 "Phosphorylase" [Candida | 0.461 | 0.435 | 0.474 | 3e-181 |
| UNIPROTKB|P04045 P04045 "Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic" [Solanum tuberosum (taxid:4113)] | Back alignment and assigned GO terms |
|---|
Score = 1851 (656.6 bits), Expect = 0., Sum P(2) = 0.
Identities = 346/400 (86%), Positives = 376/400 (94%)
Query: 450 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 509
VRMANLCVVG HAVNGVAEIHSEIV EVFN+FY+LWPEKFQNKTNGVTPRRWIRFCNP
Sbjct: 566 VRMANLCVVGGHAVNGVAEIHSEIVKEEVFNDFYELWPEKFQNKTNGVTPRRWIRFCNPP 625
Query: 510 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 569
LS+I+T W GTEDWV T KLAEL+KFADNEDLQ+++R AKR+NK+KVVSF+KEKTGYSV
Sbjct: 626 LSAIITKWTGTEDWVLKTEKLAELQKFADNEDLQNEWREAKRSNKIKVVSFLKEKTGYSV 685
Query: 570 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 629
PDAMFDIQVKRIHEYKRQL+NI GIVYRYKKMKEM+A ERK FVPRVCIFGGKAFATY
Sbjct: 686 VPDAMFDIQVKRIHEYKRQLLNIFGIVYRYKKMKEMTAAERKTNFVPRVCIFGGKAFATY 745
Query: 630 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 689
VQAKRIVKFITDVGAT+NHDPEIGDLLKV+FVPDYNVSVAELLIPAS+LS+HISTAGMEA
Sbjct: 746 VQAKRIVKFITDVGATINHDPEIGDLLKVVFVPDYNVSVAELLIPASDLSEHISTAGMEA 805
Query: 690 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPD 749
SGTSNMKFAMNGCI IGTLDGANVEIR+EVGEENFFLFGA+AHEIAGLRKER++GKFVPD
Sbjct: 806 SGTSNMKFAMNGCIQIGTLDGANVEIREEVGEENFFLFGAQAHEIAGLRKERADGKFVPD 865
Query: 750 ARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYC 809
RFEEVK+FV+SG FGSYNYD+L+GSLEGNEGFG+ADYFLVGKDFPSY+ECQEKVDEAY
Sbjct: 866 ERFEEVKEFVRSGAFGSYNYDDLIGSLEGNEGFGRADYFLVGKDFPSYIECQEKVDEAYR 925
Query: 810 DQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVEL 849
DQKRWT MSI+NTAGS KFSSDRTI EYA+DIWNI VE+
Sbjct: 926 DQKRWTTMSILNTAGSYKFSSDRTIHEYAKDIWNIEAVEI 965
|
|
| UNIPROTKB|P53535 STP-1 "Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic" [Solanum tuberosum (taxid:4113)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2093787 PHS1 "alpha-glucan phosphorylase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2075576 PHS2 "alpha-glucan phosphorylase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0281383 glpV "glycogen phosphorylase b" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| ASPGD|ASPL0000059322 AN1015 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0291123 glpD "glycogen phosphorylase a" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G4MW66 MGG_01819 "Phosphorylase" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
| CGD|CAL0001970 GPH1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q5AFP7 GPH1 "Phosphorylase" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P27598 | PHSL_IPOBA | 2, ., 4, ., 1, ., 1 | 0.7976 | 0.9694 | 0.8628 | N/A | no |
| Q9LIB2 | PHS1_ARATH | 2, ., 4, ., 1, ., 1 | 0.7788 | 0.9494 | 0.8388 | yes | no |
| P53535 | PHSL2_SOLTU | 2, ., 4, ., 1, ., 1 | 0.7529 | 0.98 | 0.8552 | N/A | no |
| P53536 | PHSL_VICFA | 2, ., 4, ., 1, ., 1 | 0.7936 | 0.9905 | 0.8394 | N/A | no |
| P04045 | PHSL1_SOLTU | 2, ., 4, ., 1, ., 1 | 0.7847 | 0.9717 | 0.8550 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.976 |
| 4th Layer | 2.4.1.1 | 0.991 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | estExt_Genewise1_v1.C_LG_IV0101 | hypothetical protein; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (By similarity) (950 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
 | eugene3.00280310 | • | • | • | • | • | 0.970 | ||||
 | fgenesh4_pg.C_LG_V001651 | • | • | • | • | 0.954 | |||||
 | gw1.XV.361.1 | • | • | • | • | 0.951 | |||||
 | gw1.164.92.1 | • | • | • | • | 0.943 | |||||
 | fgenesh4_pm.C_LG_XIV000240 | • | • | • | • | 0.935 | |||||
 | gw1.XVII.1126.1 | • | • | • | • | 0.934 | |||||
 | gw1.V.1420.1 | • | • | • | • | 0.933 | |||||
 | gw1.170.63.1 | • | • | • | • | 0.929 | |||||
 | gw1.VII.320.1 | • | • | • | • | 0.928 | |||||
 | estExt_fgenesh4_pm.C_LG_II0158 | • | • | • | • | 0.928 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 850 | |||
| cd04300 | 797 | cd04300, GT1_Glycogen_Phosphorylase, This is a fam | 0.0 | |
| cd04300 | 797 | cd04300, GT1_Glycogen_Phosphorylase, This is a fam | 0.0 | |
| pfam00343 | 712 | pfam00343, Phosphorylase, Carbohydrate phosphoryla | 0.0 | |
| TIGR02093 | 794 | TIGR02093, P_ylase, glycogen/starch/alpha-glucan p | 0.0 | |
| TIGR02093 | 794 | TIGR02093, P_ylase, glycogen/starch/alpha-glucan p | 1e-165 | |
| pfam00343 | 712 | pfam00343, Phosphorylase, Carbohydrate phosphoryla | 1e-154 | |
| PRK14985 | 798 | PRK14985, PRK14985, maltodextrin phosphorylase; Pr | 1e-143 | |
| COG0058 | 750 | COG0058, GlgP, Glucan phosphorylase [Carbohydrate | 1e-141 | |
| PRK14986 | 815 | PRK14986, PRK14986, glycogen phosphorylase; Provis | 1e-137 | |
| PRK14985 | 798 | PRK14985, PRK14985, maltodextrin phosphorylase; Pr | 1e-103 | |
| PRK14986 | 815 | PRK14986, PRK14986, glycogen phosphorylase; Provis | 1e-102 | |
| COG0058 | 750 | COG0058, GlgP, Glucan phosphorylase [Carbohydrate | 1e-100 | |
| TIGR02094 | 601 | TIGR02094, more_P_ylases, alpha-glucan phosphoryla | 3e-18 | |
| TIGR02094 | 601 | TIGR02094, more_P_ylases, alpha-glucan phosphoryla | 4e-13 | |
| cd04299 | 778 | cd04299, GT1_Glycogen_Phosphorylase_like, This fam | 9e-12 | |
| cd04299 | 778 | cd04299, GT1_Glycogen_Phosphorylase_like, This fam | 7e-09 | |
| COG5271 | 4600 | COG5271, MDN1, AAA ATPase containing von Willebran | 0.002 |
| >gnl|CDD|99996 cd04300, GT1_Glycogen_Phosphorylase, This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Score = 654 bits (1691), Expect = 0.0
Identities = 210/409 (51%), Positives = 273/409 (66%), Gaps = 23/409 (5%)
Query: 445 EPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIR 504
+ VRMA+L +VGSH+VNGVA +HSE++ VF +FY+L+PEKF NKTNG+TPRRW+
Sbjct: 403 GGEKQVRMAHLAIVGSHSVNGVAALHSELLKETVFKDFYELYPEKFNNKTNGITPRRWLL 462
Query: 505 FCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEK 564
NP LS+++T +G +DWVT+ +L +L FAD+ +FRA K+ NK ++ ++IK+
Sbjct: 463 QANPGLSALITETIG-DDWVTDLDQLKKLEPFADDPAFLKEFRAIKQANKERLAAYIKKT 521
Query: 565 TGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGK 624
TG V PD++FD+QVKRIHEYKRQL+N+L I++ Y ++KE A VPR IFGGK
Sbjct: 522 TGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENP----NADIVPRTFIFGGK 577
Query: 625 AFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHIST 684
A Y AK I+K I V VN+DP++GD LKV+F+P+YNVS+AE +IPA++LS+ IST
Sbjct: 578 AAPGYYMAKLIIKLINAVADVVNNDPDVGDKLKVVFLPNYNVSLAEKIIPAADLSEQIST 637
Query: 685 AGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEG 744
AG EASGT NMKF +NG + IGTLDGANVEI +EVGEEN F+FG A E+ LR
Sbjct: 638 AGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFGLTAEEVEALRANGYYP 697
Query: 745 KFV--PDARFEEVKKFVKSGVFGSYN-------YDELMGSLEGNEGFGQADYFLVGKDFP 795
D V + SG F + D L L GN D +LV DF
Sbjct: 698 ADYYEADPELRRVLDQIASGFFSPGDPGEFRPLVDSL---LNGN------DEYLVLADFE 748
Query: 796 SYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNI 844
SY++ QEKVD Y DQ+ W R SI+N A S KFSSDRTI+EYA DIWN+
Sbjct: 749 SYVDAQEKVDALYRDQEEWARKSILNIARSGKFSSDRTIREYAEDIWNV 797
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 797 |
| >gnl|CDD|99996 cd04300, GT1_Glycogen_Phosphorylase, This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
| >gnl|CDD|215868 pfam00343, Phosphorylase, Carbohydrate phosphorylase | Back alignment and domain information |
|---|
| >gnl|CDD|233722 TIGR02093, P_ylase, glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
| >gnl|CDD|233722 TIGR02093, P_ylase, glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
| >gnl|CDD|215868 pfam00343, Phosphorylase, Carbohydrate phosphorylase | Back alignment and domain information |
|---|
| >gnl|CDD|237881 PRK14985, PRK14985, maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223136 COG0058, GlgP, Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|184948 PRK14986, PRK14986, glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237881 PRK14985, PRK14985, maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|184948 PRK14986, PRK14986, glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223136 COG0058, GlgP, Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|233723 TIGR02094, more_P_ylases, alpha-glucan phosphorylases | Back alignment and domain information |
|---|
| >gnl|CDD|233723 TIGR02094, more_P_ylases, alpha-glucan phosphorylases | Back alignment and domain information |
|---|
| >gnl|CDD|99995 cd04299, GT1_Glycogen_Phosphorylase_like, This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
| >gnl|CDD|99995 cd04299, GT1_Glycogen_Phosphorylase_like, This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
| >gnl|CDD|227596 COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 850 | |||
| KOG2099 | 843 | consensus Glycogen phosphorylase [Carbohydrate tra | 100.0 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 100.0 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 100.0 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 100.0 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 100.0 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 100.0 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 100.0 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 100.0 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 100.0 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.84 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 99.8 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.67 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 99.66 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 99.47 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.41 | |
| PLN02316 | 1036 | synthase/transferase | 98.82 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 97.92 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 97.27 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 97.24 | |
| PLN00142 | 815 | sucrose synthase | 97.24 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 97.22 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 97.21 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 97.19 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 97.16 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 97.15 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 97.03 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 97.0 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 96.99 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 96.93 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 96.79 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 96.65 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 96.64 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 96.61 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 96.58 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 96.55 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 96.49 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 96.48 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 96.44 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 96.4 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 96.4 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 96.28 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 96.17 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 96.15 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 95.92 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 95.87 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 95.8 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 95.71 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 95.58 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 95.52 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 95.51 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 95.44 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 95.34 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 95.06 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 95.04 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 94.85 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 94.77 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 94.19 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 94.12 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 94.04 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 93.95 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 93.84 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 93.56 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 93.46 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 92.94 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 92.17 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 91.72 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 91.23 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 91.01 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 90.37 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 89.32 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 88.5 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 84.25 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 82.61 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 80.68 |
| >KOG2099 consensus Glycogen phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-263 Score=2129.54 Aligned_cols=738 Identities=56% Similarity=0.967 Sum_probs=715.9
Q ss_pred CcccCCcchHHHHHhcCcHHHHHHHHHHhCCCHHHHHccCCCCCCCCCCchhchhhhHhhhhccCCCeEEEeecCCCcce
Q 003074 1 MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLF 80 (850)
Q Consensus 1 ~Efl~Gr~l~n~l~nlgl~~~~~eal~~lg~~le~~~~~E~da~LgnGGLGrLAgc~ldS~a~L~~P~~G~GlrY~yG~F 80 (850)
|||+|||+|+|+++||||++.+.+||.+||+++|++.++|+|||||||||||||+||||||||||+|+|||||||+||+|
T Consensus 88 lEf~mGRaL~Ntm~Nlglq~~~deAl~qlG~dlEel~e~E~DagLGNGGLGRLAaCFlDSMATlglpA~GYGlRYeyGiF 167 (843)
T KOG2099|consen 88 LEFYMGRALQNTMINLGLQNACDEALYQLGLDLEELEEQEEDAGLGNGGLGRLAACFLDSMATLGLPAYGYGLRYEYGIF 167 (843)
T ss_pred hHHhhhhHHHHHHHhccCcchhHHHHHHhCcCHHHHHhcCcCcCcCCcchHHHHHHHHHHHhhcCCccccccceeehhhH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCceeeecccccccCCCcccccCCceeeeecCCeeeeCCCCCeeeeCCeeEEEEEEeecCCCCCCCCeEEEEEEE
Q 003074 81 KQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWS 160 (850)
Q Consensus 81 ~Q~I~dG~Q~E~pd~Wl~~gnpwei~r~~~~~~V~f~G~~~~~~~G~~~w~~~~~v~A~~yd~pi~Gy~~~~~~~LRLW~ 160 (850)
+|+|.+|||+|.||+||+.|||||+.|+++++||+|||+|+..++| ..|++++.|.|+|||+|||||+|+++|+||||+
T Consensus 168 ~QkI~~g~Q~E~~ddWL~~gnPWE~~R~e~~lPV~FyGkV~~~~~g-~kWid~q~V~A~~YD~PvPGyk~n~vntlRLWs 246 (843)
T KOG2099|consen 168 KQKITDGWQVEEPDDWLRYGNPWEKARPEVMLPVHFYGKVEHTPDG-SKWIDTQVVLAMPYDTPVPGYKNNTVNTLRLWS 246 (843)
T ss_pred HHHhcCCccccchHHHHHcCCchhhcCcceEeEEEEEEEEEeCCCc-ceeecceeEEEeccCCCCCCcccCcceeeeeec
Confidence 9999999999999999999999999999999999999999988888 579999999999999999999999999999999
Q ss_pred ecCCCCcccccccCCCchhHHHHHhhhcccccceeccCCCccccchhhhhhhhhhhhchHHHHHHHHHHhcCc-----cc
Q 003074 161 TMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGA-----NV 235 (850)
Q Consensus 161 a~v~~~~fdl~~fn~g~~~~a~~~~~~~~~IT~~LYp~D~~~~GkelRLkQEyflg~aslqdiirr~~~~~gG-----~~ 235 (850)
|+ ++++|||..||.|+|.+|+.++..+++||.+|||||+..+||+||||||||+|+||||||||||+++.+| ..
T Consensus 247 ak-a~~df~l~~fN~Gdy~~av~~~~~AenI~~VLYPnDnf~eGKeLRLKQqyf~caAtLqDIirRFk~sk~~~r~~~~~ 325 (843)
T KOG2099|consen 247 AK-APNDFDLKDFNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQQYFLCAATLQDIIRRFKSSKFGCREPVRT 325 (843)
T ss_pred cC-CCCCCCHHhccCchHHHHHHHHHhhhhceEEecCCCccccchhhhhhhhhhhhHHHHHHHHHHHhhcccCccccccc
Confidence 99 7779999999999999999999999999999999999999999999999999999999999999988776 34
Q ss_pred ccccCCCCceEEeCCCChhhhHHHHHHHHHHhcCCCHHHHHHHHccceeecccCCCCcccccCCHHHHHHhchhHHHHHH
Q 003074 236 NWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIE 315 (850)
Q Consensus 236 ~l~~l~~~~~ihlNDtHpalai~ElmR~Lid~~gl~~~eAw~i~~~~~~fTnHT~vpealEkw~~~l~~~lLpr~~~II~ 315 (850)
+|++||++++||||||||+||||||||+|||.+||+|++||+||++||+|||||++|||||+||++||++|||||+||||
T Consensus 326 ~~~~FPdkVAiQlNDTHPtLaIpELmRiLvD~e~l~W~~AWdit~kT~AYTNHTVlpEALErWp~~L~e~LLPRHleIIy 405 (843)
T KOG2099|consen 326 NFEEFPDKVAIQLNDTHPTLAIPELMRILVDLEGLDWDKAWDITQKTCAYTNHTVLPEALERWPVSLMEKLLPRHLEIIY 405 (843)
T ss_pred chhhCcHhheeeccCCCccccHHHHHHHHHhcccCCHHHHHHHhhhheeeccccccHHHHHHhhHHHHHHhhhHHHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHhhCCCCchhhHHHHhhhccccccCCchhhhhhhcccccCCCCCCCcccccccCCCCCChhhhhhhhcc
Q 003074 316 MIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQED 395 (850)
Q Consensus 316 ~in~~f~~~~~~~~~~~~~~~~~~~~~~l~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (850)
+||.+|++.+.++||+ |.+++++|+||+
T Consensus 406 ~In~~~l~~i~~~fp~-----D~drlrrmsiie----------------------------------------------- 433 (843)
T KOG2099|consen 406 EINQRFLQTVAAKFPG-----DVDRLRRMSIIE----------------------------------------------- 433 (843)
T ss_pred HHHHHHHHHHHHHCCC-----cHHHHhhhhhhh-----------------------------------------------
Confidence 9999999999999998 999999999988
Q ss_pred cccccccCCCCCCcccccccCCCCCCccchhhhhhhhhHHHHHhhhhcCCCCCeeeeeeeeeccCcchhHHHHHHHHHHh
Q 003074 396 GVLEEESTDVVPDDELENCDEEGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEIVT 475 (850)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~Ma~LAl~~S~~vNGVS~lH~ei~k 475 (850)
+. ++++++|||+||++|||+||||++|||+|+|
T Consensus 434 ---------------------------------------------e~--~~~k~i~MA~L~ivgsHaVNGVa~iHSeilK 466 (843)
T KOG2099|consen 434 ---------------------------------------------EN--SPEKRINMAHLCIVGSHAVNGVAEIHSEILK 466 (843)
T ss_pred ---------------------------------------------cC--CccceeeeeeeeeecccccccHHHHHHHHHH
Confidence 20 2347999999999999999999999999999
Q ss_pred HhhhhhhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCccccCcchHHHhhhcCCCHHHHHHHHHHHHHHHH
Q 003074 476 NEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKM 555 (850)
Q Consensus 476 ~~~f~~f~~l~P~kf~niTNGV~~rrWl~~~Np~L~~Li~~~iG~~~W~~~~~~l~~l~~~~~D~~f~~~w~~vK~~~K~ 555 (850)
+.+|+||+++||+||+||||||||||||.+|||.|++||+++||+ +|++|+++|.+|+++++|++|+++|+++|++||.
T Consensus 467 ~~~F~Df~e~~P~KFqNkTNGITPRRWL~~cnP~LadlI~e~ige-~~i~dl~~l~~L~~~a~d~~f~~~~a~vK~~NKl 545 (843)
T KOG2099|consen 467 QSVFKDFYELEPEKFQNKTNGITPRRWLLLCNPGLADLITEKIGE-EWITDLDQLTKLRKFADDEEFQREWAKVKQENKL 545 (843)
T ss_pred HHHHHHHHHhChHHhccccCCcCHHHHHHhcCchHHHHHHHHhhh-HhhhhHHHHHHHHHhcccHHHHHHHHHHHHhhHH
Confidence 999999999999999999999999999999999999999999995 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCcCCCCcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHHHH
Q 003074 556 KVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRI 635 (850)
Q Consensus 556 ~L~~~i~~~~g~~ldpd~lfd~~~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~i 635 (850)
+|++||++.+|+.++|++|||+|||||||||||+|||||+|+||++||+ ++. ..++||++||||||+|+|++||.|
T Consensus 546 k~a~~le~e~~v~inp~smFDiqVKRIHEYKRQllN~l~vi~~y~riK~-e~~---k~fvprtvm~GGKaapgY~mAK~I 621 (843)
T KOG2099|consen 546 KLAAYLEKEYGVKINPSSMFDIQVKRIHEYKRQLLNCLHVIYLYNRIKE-EPA---KAFVPRTVMIGGKAAPGYHMAKLI 621 (843)
T ss_pred HHHHHHHHHhCcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhh---hccCceEEEEcCccCchhHHHHHH
Confidence 9999999999999999999999999999999999999999999999997 544 448999999999999999999999
Q ss_pred HHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccccc
Q 003074 636 VKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEI 715 (850)
Q Consensus 636 Ik~I~~va~~vn~Dp~i~~~lkVvFlenY~vslAe~lipg~Dv~~nip~ag~EASGTs~MK~amNG~l~lstlDG~nvEi 715 (850)
||||++||++|||||.|+++|||||||||+||+||+||||+|+|+||||||+||||||||||||||||+|||||||||||
T Consensus 622 iklit~V~dvVN~Dp~vgd~LKViFl~nY~Vs~AE~iIPasdLSe~ISTAGtEASGT~NMKF~lNG~l~IGTlDGANVEm 701 (843)
T KOG2099|consen 622 IKLITAVADVVNNDPEVGDRLKVIFLENYRVSLAEKIIPASDLSEQISTAGTEASGTGNMKFMLNGALTIGTLDGANVEM 701 (843)
T ss_pred HHHHHHHHHHhcCChhhhheeEEEEecCcccchhhhccchHHHHHHhhhccccccCCCcceEEecCeEEEecccccchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccceeeeccchhhhhhhhhhc--CCCCCCCChhHHHHHHHHhcCCCCccc---HHHHHHHhccCCCCCCCccccc
Q 003074 716 RQEVGEENFFLFGARAHEIAGLRKER--SEGKFVPDARFEEVKKFVKSGVFGSYN---YDELMGSLEGNEGFGQADYFLV 790 (850)
Q Consensus 716 ~e~~g~eN~f~fG~~~~EV~~l~~~~--~~~~~~~~~~l~~v~~~i~~g~f~~~~---~~~l~~~L~~~~~~~~~D~y~v 790 (850)
+|++|+||+||||+++++|+.|++++ ..+.|.++|++++|+++|.+|.|++.+ |+++.+.|.++ |+|+|
T Consensus 702 ~eE~GeeN~FiFG~~~e~V~~L~k~gy~a~~~~~~~P~l~~v~~~i~sG~Fsp~~pd~fkd~~~~l~~h------D~f~V 775 (843)
T KOG2099|consen 702 AEEAGEENFFIFGMRVEDVEALRKKGYNAQEYYDPLPELKQVIDQIESGFFSPKNPDEFKDIVNMLMYH------DYFLV 775 (843)
T ss_pred HHHcCcccEEEecccHHHHHHHHhhcccccccCCCCchHHHHHHHHhcCccCCCCchHHHHHHHhhhcc------ceEEe
Confidence 99999999999999999999999985 444578999999999999999999876 88888888874 99999
Q ss_pred ccchhhHHHHHHHHHHHhcCHhHHHHHHHHHhhcCCCCChhHHHHHHHHHHhcccccCCC
Q 003074 791 GKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP 850 (850)
Q Consensus 791 l~DF~sY~~aq~~v~~~Y~d~~~W~~~~i~niA~sg~FSSDRtI~eYa~~iw~i~p~~~p 850 (850)
++||+||++||++|+++|.||++|++|+|+|||+||+|||||||.|||++||+|+|++.|
T Consensus 776 ~~Df~sYi~~q~kVd~~y~nqk~W~~msi~niA~sgkFSSDRtI~eYa~eIWnvep~~~~ 835 (843)
T KOG2099|consen 776 FADFEAYIKCQEKVDQLYRNQKEWLKMSILNIAGSGKFSSDRTIAEYAREIWNVEPSELP 835 (843)
T ss_pred eCcHHHHHHHHHHHHHHHhCHHHHHHHHHHhhhcccccCccchHHHHHHHhcCCCcccCC
Confidence 999999999999999999999999999999999999999999999999999999999865
|
|
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 850 | ||||
| 1l5v_A | 796 | Crystal Structure Of The Maltodextrin Phosphorylase | 1e-102 | ||
| 1qm5_A | 796 | Phosphorylase Recognition And Phosphorylysis Of Its | 1e-102 | ||
| 2zb2_A | 849 | Human Liver Glycogen Phosphorylase A Complexed With | 1e-101 | ||
| 1xoi_A | 846 | Human Liver Glycogen Phosphorylase A Complexed With | 1e-101 | ||
| 1z8d_A | 842 | Crystal Structure Of Human Muscle Glycogen Phosphor | 1e-101 | ||
| 1fc0_A | 846 | Human Liver Glycogen Phosphorylase Complexed With N | 1e-101 | ||
| 2qll_A | 847 | Human Liver Glycogen Phosphorylase- Gl Complex Leng | 1e-101 | ||
| 1em6_A | 847 | Human Liver Glycogen Phosphorylase A Complexed With | 1e-101 | ||
| 1fa9_A | 846 | Human Liver Glycogen Phosphorylase A Complexed With | 1e-101 | ||
| 3dds_A | 848 | Crystal Structure Of Glycogen Phosphorylase Complex | 1e-101 | ||
| 3ceh_A | 809 | Human Liver Glycogen Phosphorylase (Tense State) In | 1e-101 | ||
| 2ecp_A | 796 | The Crystal Structure Of The E. Coli Maltodextrin P | 1e-101 | ||
| 1ahp_A | 797 | Oligosaccharide Substrate Binding In Escherichia Co | 1e-100 | ||
| 1c8l_A | 842 | Synergistic Inhibition Of Glycogen Phosphorylase A | 1e-100 | ||
| 1gpa_A | 842 | Structural Mechanism For Glycogen Phosphorylase Con | 1e-100 | ||
| 1pyg_A | 842 | Structural Basis For The Activation Of Glycogen Pho | 1e-100 | ||
| 2gj4_A | 824 | Structure Of Rabbit Muscle Glycogen Phosphorylase I | 1e-100 | ||
| 7gpb_A | 842 | Structural Mechanism For Glycogen Phosphorylase Con | 1e-100 | ||
| 1abb_A | 828 | Control Of Phosphorylase B Conformation By A Modifi | 1e-100 | ||
| 2gm9_A | 825 | Structure Of Rabbit Muscle Glycogen Phosphorylase I | 1e-100 | ||
| 2ffr_A | 825 | Crystallographic Studies On N-Azido-Beta-D-Glucopyr | 1e-100 | ||
| 1c50_A | 830 | Identification And Structural Characterization Of A | 1e-100 | ||
| 1noi_A | 842 | Complex Of Glycogen Phosphorylase With A Transition | 1e-100 | ||
| 2g9q_A | 842 | The Crystal Structure Of The Glycogen Phosphorylase | 1e-100 | ||
| 1z6p_A | 842 | Glycogen Phosphorylase Amp Site Inhibitor Complex L | 1e-100 | ||
| 2pyd_A | 843 | The Crystal Structure Of Glycogen Phosphorylase In | 1e-100 | ||
| 3nc4_A | 841 | The Binding Of Beta-D-Glucopyranosyl-Thiosemicarbaz | 1e-100 | ||
| 4ej2_A | 825 | Crystal Structure Of Gpb In Complex With Dk10 Lengt | 1e-100 | ||
| 1ygp_B | 879 | Phosphorylated Form Of Yeast Glycogen Phosphorylase | 5e-97 | ||
| 2c4m_A | 796 | Starch Phosphorylase: Structural Studies Explain Ox | 2e-95 |
| >pdb|1L5V|A Chain A, Crystal Structure Of The Maltodextrin Phosphorylase Complexed With Glucose-1-Phosphate Length = 796 | Back alignment and structure |
|
| >pdb|1QM5|A Chain A, Phosphorylase Recognition And Phosphorylysis Of Its Oligosaccharide Substrate: Answers To A Long Outstanding Question Length = 796 | Back alignment and structure |
| >pdb|2ZB2|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Glcose And 5- Chloro-N-[4-(1, 2-Dihydroxyethyl)phenyl]-1h-Indole-2-Carboxamide Length = 849 | Back alignment and structure |
| >pdb|1XOI|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Chloroindoloyl Glycine Amide Length = 846 | Back alignment and structure |
| >pdb|1Z8D|A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose Length = 842 | Back alignment and structure |
| >pdb|1FC0|A Chain A, Human Liver Glycogen Phosphorylase Complexed With N-Acetyl-Beta-D- Glucopyranosylamine Length = 846 | Back alignment and structure |
| >pdb|2QLL|A Chain A, Human Liver Glycogen Phosphorylase- Gl Complex Length = 847 | Back alignment and structure |
| >pdb|1EM6|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Glcnac And Cp-526, 423 Length = 847 | Back alignment and structure |
| >pdb|1FA9|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Amp Length = 846 | Back alignment and structure |
| >pdb|3DDS|A Chain A, Crystal Structure Of Glycogen Phosphorylase Complexed With An Anthranilimide Based Inhibitor Gsk261 Length = 848 | Back alignment and structure |
| >pdb|3CEH|A Chain A, Human Liver Glycogen Phosphorylase (Tense State) In Complex With The Allosteric Inhibitor Ave5688 Length = 809 | Back alignment and structure |
| >pdb|2ECP|A Chain A, The Crystal Structure Of The E. Coli Maltodextrin Phosphorylase Complex Length = 796 | Back alignment and structure |
| >pdb|1AHP|A Chain A, Oligosaccharide Substrate Binding In Escherichia Coli Maltodextrin Phsphorylase Length = 797 | Back alignment and structure |
| >pdb|1C8L|A Chain A, Synergistic Inhibition Of Glycogen Phosphorylase A By A Potential Antidiabetic Drug And Caffeine Length = 842 | Back alignment and structure |
| >pdb|1GPA|A Chain A, Structural Mechanism For Glycogen Phosphorylase Control By Phosphorylation And Amp Length = 842 | Back alignment and structure |
| >pdb|1PYG|A Chain A, Structural Basis For The Activation Of Glycogen Phosphorylase B By Adenosine Monophosphate Length = 842 | Back alignment and structure |
| >pdb|2GJ4|A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand Length = 824 | Back alignment and structure |
| >pdb|7GPB|A Chain A, Structural Mechanism For Glycogen Phosphorylase Control By Phosphorylation And Amp Length = 842 | Back alignment and structure |
| >pdb|1ABB|A Chain A, Control Of Phosphorylase B Conformation By A Modified Cofactor: Crystallographic Studies On R-State Glycogen Phosphorylase Reconstituted With Pyridoxal 5'-Diphosphate Length = 828 | Back alignment and structure |
| >pdb|2GM9|A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Thienopyrrole Length = 825 | Back alignment and structure |
| >pdb|2FFR|A Chain A, Crystallographic Studies On N-Azido-Beta-D-Glucopyranosylamine, An Inhibitor Of Glycogen Phosphorylase: Comparison With N-Acetyl-Beta-D- Glucopyranosylamine Length = 825 | Back alignment and structure |
| >pdb|1C50|A Chain A, Identification And Structural Characterization Of A Novel Allosteric Binding Site Of Glycogen Phosphorylase B Length = 830 | Back alignment and structure |
| >pdb|1NOI|A Chain A, Complex Of Glycogen Phosphorylase With A Transition State Analogue Nojirimycin Tetrazole And Phosphate In The T And R States Length = 842 | Back alignment and structure |
| >pdb|2G9Q|A Chain A, The Crystal Structure Of The Glycogen Phosphorylase B- 1ab Complex Length = 842 | Back alignment and structure |
| >pdb|1Z6P|A Chain A, Glycogen Phosphorylase Amp Site Inhibitor Complex Length = 842 | Back alignment and structure |
| >pdb|2PYD|A Chain A, The Crystal Structure Of Glycogen Phosphorylase In Complex With Glucose At 100 K Length = 843 | Back alignment and structure |
| >pdb|3NC4|A Chain A, The Binding Of Beta-D-Glucopyranosyl-Thiosemicarbazone Derivatives To Glycogen Phosphorylase: A New Class Of Inhibitors Length = 841 | Back alignment and structure |
| >pdb|4EJ2|A Chain A, Crystal Structure Of Gpb In Complex With Dk10 Length = 825 | Back alignment and structure |
| >pdb|2C4M|A Chain A, Starch Phosphorylase: Structural Studies Explain Oxyanion- Dependent Kinetic Stability And Regulatory Control. Length = 796 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} Length = 796 | Back alignment and structure |
|---|
Score = 675 bits (1744), Expect = 0.0
Identities = 177/403 (43%), Positives = 252/403 (62%), Gaps = 9/403 (2%)
Query: 450 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 509
V MA + ++++NGVA +H+EI+ E ++Y LWPEKF NKTNGVTPRRW+R NP
Sbjct: 393 VHMAWIACYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPG 452
Query: 510 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 569
LS +LT G++DWVT+ +L +LR +AD++ + + RA K NK +I E+ G +
Sbjct: 453 LSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAEWILERQGIEI 512
Query: 570 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 629
P+++FD+Q+KR+HEYKRQLMN L ++ Y ++KE + R IFG KA Y
Sbjct: 513 DPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKE----DGLTDIPARTVIFGAKAAPGY 568
Query: 630 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 689
V+AK I+K I + VN+DPE+ LLKV+FV +YNVS AE ++PAS++S+ ISTAG EA
Sbjct: 569 VRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEA 628
Query: 690 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKE-RSEGKFVP 748
SGTSNMKF MNG + +GT+DGANVEI VGEEN ++FGAR E+ LR+ + +
Sbjct: 629 SGTSNMKFMMNGALTLGTMDGANVEIVDSVGEENAYIFGARVEELPALRESYKPYELYET 688
Query: 749 DARFEEVKKFVKSGVFGSYN---YDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVD 805
+ + +G N + +L SL G +D + V DF Y E ++++
Sbjct: 689 VPGLKRALDALDNGTLNDNNSGLFYDLKHSLIHGYGKDASDTYYVLGDFADYRETRDRMA 748
Query: 806 EAYC-DQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPV 847
Y D W RM+ +N S +FSSDRTI++YA +IW + P
Sbjct: 749 ADYASDPLGWARMAWINICESGRFSSDRTIRDYATEIWKLEPT 791
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} Length = 796 | Back alignment and structure |
|---|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... Length = 824 | Back alignment and structure |
|---|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... Length = 824 | Back alignment and structure |
|---|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* Length = 796 | Back alignment and structure |
|---|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* Length = 796 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 850 | |||
| 1ygp_A | 879 | Yeast glycogen phosphorylase; phosphorylated form, | 100.0 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 100.0 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 100.0 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 100.0 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 99.43 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 98.3 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 97.93 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 97.85 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 97.25 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 97.19 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 97.18 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 97.06 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 96.95 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 96.93 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 96.71 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 96.57 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 96.53 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 96.46 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 95.73 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 95.67 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 95.2 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 94.07 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 90.34 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 88.17 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 85.55 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 82.96 |
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 850 | ||||
| d2gj4a1 | 824 | c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit | 1e-151 | |
| d2gj4a1 | 824 | c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit | 1e-121 | |
| d1ygpa_ | 876 | c.87.1.4 (A:) Glycogen phosphorylase {Baker's yeas | 1e-148 | |
| d1ygpa_ | 876 | c.87.1.4 (A:) Glycogen phosphorylase {Baker's yeas | 1e-129 | |
| d1l5wa_ | 796 | c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {E | 1e-143 | |
| d1l5wa_ | 796 | c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {E | 1e-116 |
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 824 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 462 bits (1191), Expect = e-151
Identities = 181/433 (41%), Positives = 268/433 (61%), Gaps = 16/433 (3%)
Query: 423 EELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEF 482
+ + DV + + + + + MA+LC+ GSHAVNGVA IHSEI+ +F +F
Sbjct: 401 NRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDF 460
Query: 483 YKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDL 542
Y+L P KFQNKTNG+TPRRW+ CNP L+ I+ +G E+++++ +L +L + D+E
Sbjct: 461 YELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIG-EEYISDLDQLRKLLSYVDDEAF 519
Query: 543 QSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKM 602
K+ NK+K ++++ + ++P+++FD+QVKRIHEYKRQL+N L ++ Y ++
Sbjct: 520 IRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRI 579
Query: 603 KEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVP 662
K+ VPR + GGKA Y AK I+K IT +G VNHDP +GD L+VIF+
Sbjct: 580 KKEPNK----FVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLE 635
Query: 663 DYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEE 722
+Y VS+AE +IPA++LS+ ISTAG EASGT NMKF +NG + IGT+DGANVE+ +E GEE
Sbjct: 636 NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEE 695
Query: 723 NFFLFGARAHEIAGLRKE--RSEGKFVPDARFEEVKKFVKSGVFGSYNYD---ELMGSLE 777
NFF+FG R ++ L + ++ + ++ + + SG F D +++ L
Sbjct: 696 NFFIFGMRVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLM 755
Query: 778 GNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEY 837
+ D F V D+ Y++CQE+V Y + + WTRM I N A S KFSSDRTI +Y
Sbjct: 756 HH------DRFKVFADYEEYVKCQERVSALYKNPREWTRMVIRNIATSGKFSSDRTIAQY 809
Query: 838 ARDIWNIIPVELP 850
AR+IW + P
Sbjct: 810 AREIWGVEPSRQR 822
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 824 | Back information, alignment and structure |
|---|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} Length = 796 | Back information, alignment and structure |
|---|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} Length = 796 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 850 | |||
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 100.0 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 100.0 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 100.0 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 99.04 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 97.09 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 96.83 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 96.6 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 95.18 |
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|