Citrus Sinensis ID: 003099

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------85
MVQHAAENEKKPTGADVPEKHENLVKDYCKESKFEGQRVMKHRGIEQPLRETNRSMGNETRFEEPCDTAANGRRLREAGEQIEDEKKVKKALDQEDNEKVLMEDSEQEDINLVEANEREENMRKVKEALEQVESEKTLKEACEQGDAEKRLRKALEQEANAKETFEREETERRLQVEQDIEEIGKKLTGAHENEETRKSLGQVCEQVDNFETLYEAHGRREENEMRFREALEKEASTNFSQEARVETEKSFKDAGEAKDLKELNKAHEKNQWDEYGKKLKMAEGPQLFKKGKDMASGKACMLDDNVNLRVTRLASQQEVNTEKEEVTQGAFADEGNVEIQIGNSDSELEGEAVETTNVLDDRKFEVFGLAHGNLKQEECKLEMKDVAEPFCEDHCAQTMDESGTGTGQEKTTSGLQPDASTKNQEKKFANEWGERENNIKQTQVDVGLNQKLDQDKFMPTQLVKESAQNGRKMEAAQQSMLGRKGSIQKTAQSANASESLERREKNVSVTLTSKDKDAERVKRQRELEIERLRRIEEEREREREREKDRMAVDIATLEARERAFAEARERAERAAVERATAEFRQRALAEARERLEKACAEAKEKSLAEKTSMEARLRAERAAVERATVEARERAAEKAMAERGAFDARERVDRIFSEKFSASSRNSADLQDQKSQSASSFSSSRYPYSSGYVASINAERSDGIEGESAQRCKARLERHRRTAERAAKALAEKNMRDLLAQREQAERNRLAETLDADVKRWSSGKEGNLRALLSTLQYILGPDSGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNKFNSEER
ccccccHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccccccccccccccccHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccc
ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHcccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHcccccccccccccEEEEcccccHccccccccHcHcccccccHcccHHHcccHEEcccccccccccccHcccccEEEEccccccccccEEEEEEEEccccccEEEcccccccHccccccccccccccccccccccccccccccccEcccEcccccccccccccccccccccccccccccEEEccccccccHccccccHccccccccccccccccccHcccccccccccHcccccccccccHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHcHHHHHHHHccHHHHHHHHHHHHHHcccccccccccHHHcccHHHHHHHHHHHHHHHcHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcHccc
mvqhaaenekkptgadvpekheNLVKDYCKESKFEGQRVMkhrgieqplretnrsmgnetrfeepcdtaaNGRRLREAGEQIEDEKKVKKALDQEDNEKVLMEDSEQEDINLVEANEREENMRKVKEALEQVESEKTLKEACEQGDAEKRLRKALEQEANAKETFEREETERRLQVEQDIEEIGKKltgaheneeTRKSLGQVCEQVDNFETLYEAHGRREENEMRFREALEKEASTNFSQEARVETEKSFKDAGEAKDLKELNKAHEKNQWDEYGkklkmaegpqlfkkgkdmasgkacmlddnvnLRVTRLASQQevntekeevtqgafadegnveiqignsdselegeavettnvlddrkfEVFGLAHGNLKQEECKLEMkdvaepfcedhcaqtmdesgtgtgqekttsglqpdastknQEKKFANEWGERENNIKQTQVDvglnqkldqdkfmptQLVKESAQNGRKMEAAQQSMLGRKGSIQKTAQSANASESLERREKNVSVtltskdkdaERVKRQRELEIERLRRIEEEREREREREKDRMAVDIATLEARERAFAEARERAERAAVERATAEFRQRALAEARERLEKACAEAKEKSLAEKTSMEARLRAERAAVERATVEARERAAEKAMAERGAFDARERVDRIFSEkfsassrnsadlqdqksqsassfsssrypyssgyvasinaersdgiegeSAQRCKARLERHRRTAERAAKALAEKNMRDLLAQREQAERNRLAETLDADVkrwssgkegNLRALLSTLQYilgpdsgwhpiplteVITSAAVKKAYRKAtlcvhpdklqqRGASIQQKYICEKVFDLLKEAWNKFNSEER
mvqhaaenekkptgadvpekhenLVKDYCKeskfegqrvmkhrgieqplretnrsmgnetrfeepcdtaangrrlreageqiedekkvkkaldqednekvlmedseqedinlveanereenMRKVKEAleqvesektlkEACEQGDAEKRLRKALEQeanaketfereeterrlqveqDIEEIGKkltgaheneetrkslgqvcEQVDNFETLYeahgrreenEMRFREALEkeastnfsqearveteksfkdageakdlkelnkaheknqwdeygkklKMAEGPQLFKKGKDMASGKACMLDDNVNLRVTRLAsqqevntekeevtqgafadegnVEIQIgnsdselegEAVETTNVLDDRKFEVFGLAHGNLKQEECKLEMKDVAEPFCEDHCAQTMDEsgtgtgqekttsglqpdastknQEKKFAnewgerennikqTQVDVGLNQKLDQDKFMPTQLVKESAQNGRKMEAAQQSMLGRKGSIQKTAQsanaseslerreknvsvtltskdkdaervkrqreleierlrrieeererererekdrmavdiatlEARERAFAEARERAERAAVERATAEFRQRALAEARERLEKACAEakekslaektsmeaRLRAERAAVERATVEARERAAEKamaergafdarervDRIFSEkfsassrnsadlqdqksqsassfsssrypySSGYVASINaersdgiegesAQRCKARLERHRRTAERAAKALAEKNMRDLLAQREQAERNRLaetldadvkrwssgkegnLRALLSTLQYILGPDSGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNKFNSEER
MVQHAAENEKKPTGADVPEKHENLVKDYCKESKFEGQRVMKHRGIEQPLRETNRSMGNETRFEEPCDTAANGRRLREAGEQIEDEKKVKKALDQEDNEKVLMEDSEQEDINLVEANEREENMRKVKEALEQVESEKTLKEACEQGDAEKRLRKALEQEANAKetfereeterrLQVEQDIEEIGKKLTGAHENEETRKSLGQVCEQVDNFETLYEAHGRREENEMRFREALEKEASTNFSQEARVETEKSFKDAGEAKDLKELNKAHEKNQWDEYGKKLKMAEGPQLFKKGKDMASGKACMLDDNVNLRVTRLASQQEVNTEKEEVTQGAFADEGNVEIQIGNSDSELEGEAVETTNVLDDRKFEVFGLAHGNLKQEECKLEMKDVAEPFCEDHCAQTMDESGTGTGQEKTTSGLQPDASTKNQEKKFANEWGERENNIKQTQVDVGLNQKLDQDKFMPTQLVKESAQNGRKMEAAQQSMLGRKGSIQKTAQSANASESLERREKNVSVTLTSKDKDAERVKRQreleierlrrieeerererereKDRMAVDIATLearerafaeareraeraaverataefrqralaearerlekacaeakekslaekTSMearlraeraaveratveareraaekamaergaFDARERVDRIFSEKFSASSRNSADLQDQKsqsassfsssrypyssgyVASINAERSDGIEGESAQRCKARLERHRRTAERAAKALAEKNMRDLLAQREQAERNRLAETLDADVKRWSSGKEGNLRALLSTLQYILGPDSGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNKFNSEER
***********************************************************************************************************************************************************************************************************C*QVDNFETL**************************************************************************************CMLDDNVNLRV********************************************TTNVLDDRKFEVFGLAHGNLKQEECKLEMKDVAEPFCE**************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************GNLRALLSTLQYILGPDSGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNK******
***************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************RWSSGKEGNLRALLSTLQYILGPDSGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNKFN****
***************DVPEKHENLVKDYCKESKFEGQRVMKHRGIEQPLRETNRSMGNETRFEEPCDTAANGRRLREAGEQIEDEKKVKKALDQEDNEKVLMEDSEQEDINLVEANEREENMRKVKEALEQVESEKTLKEACEQGDAEKRLRKALEQEA***************QVEQDIEEIGKKLTGAHENEETRKSLGQVCEQVDNFETLYEAHGRREENEMRFREALE********************DAGEAKDLKELNKAHEKNQWDEYGKKLKMAEGPQLFKKGKDMASGKACMLDDNVNLRVTRLAS************QGAFADEGNVEIQIGNSDSELEGEAVETTNVLDDRKFEVFGLAHGNLKQEECKLEMKDVAEPFCEDHCAQTM*****************************ANEWGERENNIKQTQVDVGLNQKLDQDKFMPTQLV*********************************************VTLTSKDKDAERVKRQRELEIERLRRIEE***********RMAVDIATLEARERAF*****************EFRQRALAEARERLE************************************************AFDARERVDRIFSEKF***************************YSSGYVASINAERSDGIEGESAQRCKARLERHRRTAERAAKALAEKNMRDLLAQREQAERNRLAETLDADVKRWSSGKEGNLRALLSTLQYILGPDSGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNKFNSEER
************************VKDYCKESKFEG***********P*RE*******ETRFEEPCDT*ANGRRLREAGEQIEDEKKVKKALDQEDNEKVLMEDSEQEDINLVEANEREENMRKVKEALEQVESEKTLKEACEQGDAEKRLRKALEQEANAKETFEREETERRLQVEQDIEEIGKKLTGAHENEETRKSLGQVCEQVDNFETLYEAHGRREENEMRFREALEKEASTNFSQEARVETEKSFKDAGEAKDLKELNK*HEKNQW**YGKKLKMAEGPQ*F**********ACMLDDNVNLRVTRLASQQE****KEEVTQGAF***GNVEIQIGNSDSELEGEAVETTNVLDDRKFEVFGLAHGN***********************************************************************************************************************************************************************************D***************************************************************************************************************************************************************************RAAKALAEKNMRDLLAQREQAERNRLAETLDADVKRWSSGKEGNLRALLSTLQYILGPDSGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNKFN****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVQHAAENEKKPTGADVPEKHENLVKDYCKESKFEGQRVMKHRGIEQPLRETNRSMGNETRFEEPCDTAANGRRxxxxxxxxxxxxxxxxxxxxxDNEKVLMEDSEQEDINxxxxxxxxxxxxxxxxxxxxxxxxKTxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxRRLQVEQDIEEIGKKLTGAHENEETRKSLGQVCEQVDNFETLYEAHGRREENEMRFREALEKEASTNFSQEARVETEKSFKDAGEAKDLKELNKAHEKNQWDEYGKKLKMAEGPQLFKKGKDMASGKACMLDDNVNLRVTRLASQQEVNTEKEEVTQGAFADEGNVEIQIGNSDSELEGEAVETTNVLDDRKFEVFGLAHGNLKQEECKLEMKDVAEPFCEDHCAQTMDESGTGTGQEKTTSGLQPDASTKNQEKKFANEWGERENNIKQTQVDVGLNQKLDQDKFMPTQLVKESAQNGRKMEAAQQSMLGRKGSIQKTAQSANASESLERREKNVSVTLTSKDKDxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxMAVDxxxxxxxxxxxxxxxxxxxxxxxxRATxxxxxxxxxxxxxxxxxxxxxxxxxxxxEKTSMEARLRAERAAVERATVEARERAAEKAMAERGAFDARERVDRIFSEKFSASSRNSADLQDQKSQSASSFSSSRYPYSSGYVASINAERSDGIEGESxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxRLAETLDADVKRWSSGKEGNLRALLSTLQYILGPDSGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNKFNSEER
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query848 2.2.26 [Sep-21-2011]
Q0WQ57891 Auxilin-related protein 2 no no 0.159 0.151 0.708 7e-56
Q9SU08904 Auxilin-related protein 1 no no 0.169 0.159 0.708 1e-55
O13773697 UBA domain-containing pro yes no 0.139 0.169 0.395 7e-17
Q99KY41305 Cyclin-G-associated kinas yes no 0.146 0.095 0.34 9e-10
Q27974910 Putative tyrosine-protein no no 0.094 0.087 0.393 2e-09
P978741305 Cyclin-G-associated kinas yes no 0.093 0.060 0.428 3e-09
O75061913 Putative tyrosine-protein yes no 0.094 0.087 0.393 3e-09
Q80TZ3938 Putative tyrosine-protein no no 0.094 0.085 0.382 5e-09
O149761311 Cyclin-G-associated kinas no no 0.147 0.095 0.34 1e-08
>sp|Q0WQ57|AUXI2_ARATH Auxilin-related protein 2 OS=Arabidopsis thaliana GN=At4g12770 PE=1 SV=1 Back     alignment and function desciption
 Score =  219 bits (558), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 102/144 (70%), Positives = 127/144 (88%)

Query: 704 IEGESAQRCKARLERHRRTAERAAKALAEKNMRDLLAQREQAERNRLAETLDADVKRWSS 763
           ++GE+ +R +ARLERH+RT ERAAKALAEKN RDL  QREQAE++R+  TLD +++RW +
Sbjct: 746 VDGETEERRRARLERHQRTQERAAKALAEKNERDLQVQREQAEKDRIGGTLDVEIRRWGA 805

Query: 764 GKEGNLRALLSTLQYILGPDSGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASI 823
           GKEGNLRALLSTLQY+L P+ GW P+ LT++IT A+VKK YRKATLC+HPDK+QQ+GA++
Sbjct: 806 GKEGNLRALLSTLQYVLWPECGWQPVSLTDLITGASVKKVYRKATLCIHPDKVQQKGANL 865

Query: 824 QQKYICEKVFDLLKEAWNKFNSEE 847
           QQKYI EKVFD+LKEAWNKFNSEE
Sbjct: 866 QQKYIAEKVFDMLKEAWNKFNSEE 889
Promotes probably uncoating of clathrin-coated vesicles.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9SU08|AUXI1_ARATH Auxilin-related protein 1 OS=Arabidopsis thaliana GN=At4g12780 PE=1 SV=2 Back     alignment and function description
>sp|O13773|UCP7_SCHPO UBA domain-containing protein 7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ucp7 PE=4 SV=1 Back     alignment and function description
>sp|Q99KY4|GAK_MOUSE Cyclin-G-associated kinase OS=Mus musculus GN=Gak PE=1 SV=2 Back     alignment and function description
>sp|Q27974|AUXI_BOVIN Putative tyrosine-protein phosphatase auxilin OS=Bos taurus GN=DNAJC6 PE=1 SV=1 Back     alignment and function description
>sp|P97874|GAK_RAT Cyclin-G-associated kinase OS=Rattus norvegicus GN=Gak PE=2 SV=1 Back     alignment and function description
>sp|O75061|AUXI_HUMAN Putative tyrosine-protein phosphatase auxilin OS=Homo sapiens GN=DNAJC6 PE=1 SV=3 Back     alignment and function description
>sp|Q80TZ3|AUXI_MOUSE Putative tyrosine-protein phosphatase auxilin OS=Mus musculus GN=Dnajc6 PE=2 SV=2 Back     alignment and function description
>sp|O14976|GAK_HUMAN Cyclin-G-associated kinase OS=Homo sapiens GN=GAK PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query848
297735127 1455 unnamed protein product [Vitis vinifera] 0.981 0.571 0.516 1e-174
225430706 1458 PREDICTED: uncharacterized protein LOC10 0.981 0.570 0.513 1e-174
224134248 1462 predicted protein [Populus trichocarpa] 0.903 0.523 0.502 1e-159
255561088 1551 auxilin, putative [Ricinus communis] gi| 0.797 0.435 0.508 1e-144
356559382447 PREDICTED: uncharacterized protein LOC10 0.481 0.912 0.643 1e-138
356495390 1404 PREDICTED: uncharacterized protein LOC10 0.438 0.264 0.651 1e-120
449522766 1372 PREDICTED: uncharacterized LOC101221934 0.424 0.262 0.614 1e-108
449451541 1402 PREDICTED: uncharacterized protein LOC10 0.424 0.256 0.614 1e-108
240256182 1422 chaperone DnaJ-domain containing protein 0.370 0.220 0.625 1e-107
359492683 1351 PREDICTED: uncharacterized protein LOC10 0.790 0.495 0.428 1e-105
>gi|297735127|emb|CBI17489.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  620 bits (1599), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 460/891 (51%), Positives = 594/891 (66%), Gaps = 59/891 (6%)

Query: 7    ENEKKPTGADVPEKHENLVKDYCKESKFEGQRVMKHRGIEQPLRETNRSMGNETRFEEPC 66
            E E K   AD  E+H+ L++   K+++ E +  MK    E+ L+E     GNE + ++  
Sbjct: 575  EAEHKLNVADEWEEHDILIEIQQKQNEVEVKEAMKQEN-ERKLKEAKERTGNERKLKKAR 633

Query: 67   DTAANGRRLREAGEQIEDEKKVK-------KALDQEDNEKV---------------LMED 104
            +   + +RL+EA EQ E EKK+K       +AL  ++NEK                +  D
Sbjct: 634  ENEKSEKRLKEALEQEETEKKLKAENEKRLEALKWQENEKKKKEAREREENERRLKVALD 693

Query: 105  SEQEDINLVEANEREENMRKVKEALEQVESEKTLKEA-------------CEQGDAEKRL 151
             E+ +    EA EREEN +++K+A+EQ E+EK LKEA             CE+ + +KRL
Sbjct: 694  WEENEKKQKEACEREENEKRLKQAIEQEENEKRLKEALKQEQILKKQKEACEREENDKRL 753

Query: 152  RKALEQEANAKETFEREETERRLQVEQDIEEIGKKLTGAHENEETRKSLGQVCEQVDNFE 211
            ++ALE E N K+   ++  E+RL+   + EEI KKL  A E EE  K    V  Q ++  
Sbjct: 754  KEALEHEENEKK---QKAHEKRLKEACEREEIEKKLKDAREREEIEKRRKDVHRQAEDKR 810

Query: 212  TLYEAHGRREENEMRFREALEKEASTNFSQEARV--ETEKSFKDAGEAKDLKELNKAHEK 269
             L + H R+E +E R  E  E E +    +EA    E+EK   D+G+ ++LK L KAH++
Sbjct: 811  RLNKTHERKE-SEKRLEEMPEWEETDKRLKEATKLEESEKRPGDSGDVEELKGLKKAHDQ 869

Query: 270  NQWDEYGKKLKMAEGPQL-FKKGKDMASGKACMLDDNVNLRVTRLASQQEVNTEKEEVTQ 328
               +E  KKLK  +G     ++    A+ +AC L +N N++  ++A + EVN+   E  Q
Sbjct: 870  IV-NENEKKLKSCQGTYAQMEENNFKATDEACKLHENKNIQAAQVAPKYEVNSL--EANQ 926

Query: 329  GAFADEGNVEIQIGNSDSELEGEAVETTNVLDDRKFEVFGLAHGNLKQEECKLEMKDVAE 388
             A   E  ++I   +     + +AVE  N+L +  FE  G+A G+ +QE+ K+ M +   
Sbjct: 927  EALGQEEKLKIAAESQGIHKDFKAVEMENILVEEIFEASGMADGDAEQEKNKIRMDNSTG 986

Query: 389  PFCEDHCAQTMDESGTGTG-----QEKTTSGLQPDASTKNQEKKFANEWGERENNIKQTQ 443
                D   +   E+G G G      EK     Q  ++ ++ +K F +EWGE E ++KQT 
Sbjct: 987  SVLLDENVKKSLEAGIGIGIGQAHLEKNLRAAQMASNPEDLKKNFTSEWGEGEKSMKQT- 1045

Query: 444  VDVGLNQKLDQDKFMPTQLVKESAQNGRKMEAAQQSMLGRKGSIQKTAQSANASESLERR 503
              V    +  +DKF P+Q++KE  +NG+K+EAAQ + L  KG+IQKTAQ  +  +S E++
Sbjct: 1046 -SVSFEPEDSKDKFRPSQVLKEWVENGKKVEAAQTATLEGKGNIQKTAQQVSNGQSTEKK 1104

Query: 504  EKNVSVTLT-SKDKDAERVKRQRELEIERLRRIEEEREREREREKDRMAVDIATLEARER 562
            EKN++ T T  + +  ER+KR+RELE +RLR++EEEREREREREKDRMAVD AT EAR+R
Sbjct: 1105 EKNINETPTLEEREREERMKRERELEKDRLRKLEEEREREREREKDRMAVDRATREARDR 1164

Query: 563  AFAEARERAERAAVERATAEFRQRALAEARERLEKACAEAKEKSLAEKTSMEARLRAERA 622
            A+ EARERAERAAVE+ATAE RQRAL EARERLEKACAEA+EK+L++KTS+EARLRAERA
Sbjct: 1165 AYVEARERAERAAVEKATAEARQRALTEARERLEKACAEAREKTLSDKTSIEARLRAERA 1224

Query: 623  AVERATVEARERAAEKAMAERGAFDARERVDRIFSEKFSASSRNSADLQDQKSQSASSFS 682
            AVERAT EARERA EKAMAE+   DARER++R  S+KFSASSRNS   Q   S    S S
Sbjct: 1225 AVERATAEARERAFEKAMAEKAVSDARERMERSVSDKFSASSRNSGLRQSSSSSDLQSQS 1284

Query: 683  SS-----RYPYSSGYVASINAERSDGIEGESAQRCKARLERHRRTAERAAKALAEKNMRD 737
            +      RYPYSS Y AS N E+S+G+EGESAQRCKARLER+RRTA+RAAKALAEKN RD
Sbjct: 1285 TGSSSGSRYPYSSVYGASYNTEKSEGVEGESAQRCKARLERYRRTADRAAKALAEKNKRD 1344

Query: 738  LLAQREQAERNRLAETLDADVKRWSSGKEGNLRALLSTLQYILGPDSGWHPIPLTEVITS 797
            LLAQREQAERNRLAETLDADVKRWSSGKEGNLRALLSTLQYILGPDSGW PIPLT+VIT+
Sbjct: 1345 LLAQREQAERNRLAETLDADVKRWSSGKEGNLRALLSTLQYILGPDSGWQPIPLTDVITA 1404

Query: 798  AAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNKFNSEER 848
             AVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNKFNSEER
Sbjct: 1405 VAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNKFNSEER 1455

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225430706|ref|XP_002266275.1| PREDICTED: uncharacterized protein LOC100244517 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224134248|ref|XP_002327792.1| predicted protein [Populus trichocarpa] gi|222836877|gb|EEE75270.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255561088|ref|XP_002521556.1| auxilin, putative [Ricinus communis] gi|223539234|gb|EEF40827.1| auxilin, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356559382|ref|XP_003547978.1| PREDICTED: uncharacterized protein LOC100776448 [Glycine max] Back     alignment and taxonomy information
>gi|356495390|ref|XP_003516561.1| PREDICTED: uncharacterized protein LOC100817245 [Glycine max] Back     alignment and taxonomy information
>gi|449522766|ref|XP_004168397.1| PREDICTED: uncharacterized LOC101221934 [Cucumis sativus] Back     alignment and taxonomy information
>gi|449451541|ref|XP_004143520.1| PREDICTED: uncharacterized protein LOC101221934 [Cucumis sativus] Back     alignment and taxonomy information
>gi|240256182|ref|NP_195370.5| chaperone DnaJ-domain containing protein [Arabidopsis thaliana] gi|332661266|gb|AEE86666.1| chaperone DnaJ-domain containing protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|359492683|ref|XP_002281287.2| PREDICTED: uncharacterized protein LOC100266034 [Vitis vinifera] gi|302142519|emb|CBI19722.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query848
TAIR|locus:21152451422 AT4G36520 [Arabidopsis thalian 0.231 0.137 0.669 3.8e-92
TAIR|locus:20184621448 AUL1 "AT1G75310" [Arabidopsis 0.234 0.137 0.610 5.8e-65
TAIR|locus:2135778904 AT4G12780 [Arabidopsis thalian 0.178 0.167 0.681 5.7e-63
TAIR|locus:2135763891 AT4G12770 [Arabidopsis thalian 0.176 0.168 0.686 6e-62
TAIR|locus:2036967523 AT1G21660 [Arabidopsis thalian 0.169 0.275 0.590 5.6e-44
TAIR|locus:2037256651 JAC1 "J-domain protein require 0.123 0.161 0.555 5.8e-27
TAIR|locus:2009817455 AT1G30280 [Arabidopsis thalian 0.146 0.272 0.392 1.2e-17
POMBASE|SPAC17A5.12697 ucp7 "UBA/TPR/DNAJ domain prot 0.176 0.215 0.346 5e-16
DICTYBASE|DDB_G0271058 1528 vilC "villin-like protein C" [ 0.487 0.270 0.240 1.3e-15
DICTYBASE|DDB_G0270864963 DDB_G0270864 "unknown" [Dictyo 0.574 0.505 0.219 8.4e-14
TAIR|locus:2115245 AT4G36520 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 665 (239.2 bits), Expect = 3.8e-92, Sum P(2) = 3.8e-92
 Identities = 136/203 (66%), Positives = 156/203 (76%)

Query:   646 FDARERVDRIFSEKFSASSRNSADLQDQKXXXXXXXXXXXXXXXXXXVASINAERSDGIE 705
             F+ARER++R  S+K S SS    +  +                      +   + S G E
Sbjct:  1227 FEARERMERSVSDKQSQSSGFFGERME-------ISLSDKQFQNSVSFGASRYQDSHGTE 1279

Query:   706 GESAQRCKARLERHRRTAERAAKALAEKNMRDLLAQREQAERNRLAETLDADVKRWSSGK 765
             GES QR  +RLERH+RTA+R AKALAEKNMRDL+AQREQAER R+AETLD +VKRWSSGK
Sbjct:  1280 GESPQRYTSRLERHQRTADRVAKALAEKNMRDLVAQREQAERIRIAETLDTEVKRWSSGK 1339

Query:   766 EGNLRALLSTLQYILGPDSGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQ 825
             EGN+RALLSTLQYILGP+SGW P+PLTEVITSAAVK+AYRKATLCVHPDKLQQRGA+I Q
Sbjct:  1340 EGNIRALLSTLQYILGPESGWQPLPLTEVITSAAVKRAYRKATLCVHPDKLQQRGANIHQ 1399

Query:   826 KYICEKVFDLLKEAWNKFNSEER 848
             KYICEKVFDLLKEAWN+FNSE R
Sbjct:  1400 KYICEKVFDLLKEAWNRFNSEGR 1422
GO:0031072 "heat shock protein binding" evidence=IEA
TAIR|locus:2018462 AUL1 "AT1G75310" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2135778 AT4G12780 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2135763 AT4G12770 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2036967 AT1G21660 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037256 JAC1 "J-domain protein required for chloroplast accumulation response 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009817 AT1G30280 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
POMBASE|SPAC17A5.12 ucp7 "UBA/TPR/DNAJ domain protein Ucp7" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0271058 vilC "villin-like protein C" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0270864 DDB_G0270864 "unknown" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00570158
hypothetical protein (1462 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query848
PTZ00121 2084 PTZ00121, PTZ00121, MAEBL; Provisional 1e-07
PTZ001212084 PTZ00121, PTZ00121, MAEBL; Provisional 6e-06
PRK09510387 PRK09510, tolA, cell envelope integrity inner memb 3e-05
PTZ00121 2084 PTZ00121, PTZ00121, MAEBL; Provisional 2e-04
PTZ00121 2084 PTZ00121, PTZ00121, MAEBL; Provisional 4e-04
TIGR02680 1353 TIGR02680, TIGR02680, TIGR02680 family protein 4e-04
PRK02224880 PRK02224, PRK02224, chromosome segregation protein 4e-04
PRK09510387 PRK09510, tolA, cell envelope integrity inner memb 7e-04
TIGR021681179 TIGR02168, SMC_prok_B, chromosome segregation prot 7e-04
TIGR02168 1179 TIGR02168, SMC_prok_B, chromosome segregation prot 0.001
PRK05035695 PRK05035, PRK05035, electron transport complex pro 0.001
PRK00409782 PRK00409, PRK00409, recombination and DNA strand e 0.002
PRK00409782 PRK00409, PRK00409, recombination and DNA strand e 0.002
pfam02463 1162 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 0.003
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information 
 Score = 55.5 bits (133), Expect = 1e-07
 Identities = 127/614 (20%), Positives = 236/614 (38%), Gaps = 38/614 (6%)

Query: 35   EGQRVMKHRGIEQPLRETNRSMGNETRFEEPCDTAANGRRLREAGEQIEDEKKVKKALDQ 94
            E ++    +  E    E  +    + R  E    A + R+  EA  + ED K+V+ A   
Sbjct: 1102 EAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEA-RKAEDAKRVEIARKA 1160

Query: 95   EDNEKVLMEDSEQEDINLVEANEREENMRKVKEALEQVESEKTLKEACEQGDAEKRLRKA 154
            ED  K   E  + ED    EA  + E +RK +E  +  ++ K   EA  + + E++    
Sbjct: 1161 EDARKA-EEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKA--EAARKAEEERKA--- 1214

Query: 155  LEQEANAKETFEREETERRLQVEQDIEEIGKKLTGAHENEETRKSLGQVCEQVDNFETLY 214
              +EA   E  ++ E  ++ +  +   E  KK      NEE RK            +   
Sbjct: 1215 --EEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAI 1272

Query: 215  EAHGRREENEMRFREALEKEASTNFSQEARVETEKSFKDAGEAKDLKELNKAHEKNQWDE 274
            +A   R+ +E++  E  +K      ++E + + +++ K A EAK   E  K  E+ +   
Sbjct: 1273 KAEEARKADELKKAEEKKKADEAKKAEEKK-KADEAKKKAEEAKKADEAKKKAEEAKKKA 1331

Query: 275  YGKKLKMAEGPQLFKKGKDMASGKACMLDDNVNLRVTRLASQQEVNTEKEEVTQGAFADE 334
               K K  E  +  +  K  A   A   +            ++E   + +   + A   +
Sbjct: 1332 DAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKK 1391

Query: 335  GNVEIQIGNSDSELEGEAVETTNVLDDRKFEVFGLAHGNLKQEECK--LEMKDVAEPFCE 392
               E +    + + + + ++       +  E    A    K +E K   E    A+   +
Sbjct: 1392 KADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKK 1451

Query: 393  DHCAQTMDESGTGTGQEKTTSGLQPDASTKNQEKKFANEWGERENNIKQTQVDVGLNQKL 452
                    E      +E   +    +A  K +E K A+E  ++    K+   +    +K 
Sbjct: 1452 KAEEAKKAEEAKKKAEEAKKA---DEAKKKAEEAKKADEAKKKAEEAKKKADEA---KKA 1505

Query: 453  DQDKFMPTQLVK----ESAQNGRKMEAAQQSMLGRKGSIQKTAQSANASESLERREKNVS 508
             + K    +  K    + A   +K E A+++   +K   +K A     +E L++ E+   
Sbjct: 1506 AEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEK-- 1563

Query: 509  VTLTSKDKDAERVKRQRELEIERLRRIEEEREREREREKDRMAVDIATLEARERAFAEAR 568
                   K AE  K+  E +   LR+ EE ++ E  R ++ M +        E       
Sbjct: 1564 -------KKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKL-------YEEEKKMKA 1609

Query: 569  ERAERAAVERATAEFRQRALAEARERLEKACAEAKEKSLAEKTSMEARLRAERAAVERAT 628
            E A++A   +  AE  ++A  E ++  +    EA+EK  AE+          +AA E   
Sbjct: 1610 EEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKK 1669

Query: 629  VEARERAAEKAMAE 642
             E  ++ AE+A   
Sbjct: 1670 AEEDKKKAEEAKKA 1683

Length = 2084
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
>gnl|CDD|236545 PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional Back     alignment and domain information
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
>gnl|CDD|233973 TIGR02680, TIGR02680, TIGR02680 family protein Back     alignment and domain information
>gnl|CDD|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional Back     alignment and domain information
>gnl|CDD|236545 PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional Back     alignment and domain information
>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>gnl|CDD|235334 PRK05035, PRK05035, electron transport complex protein RnfC; Provisional Back     alignment and domain information
>gnl|CDD|234750 PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed Back     alignment and domain information
>gnl|CDD|234750 PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed Back     alignment and domain information
>gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 848
KOG0431453 consensus Auxilin-like protein and related protein 100.0
smart0027160 DnaJ DnaJ molecular chaperone homology domain. 98.67
KOG0713 336 consensus Molecular chaperone (DnaJ superfamily) [ 98.63
cd0625755 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho 98.58
COG0484 371 DnaJ DnaJ-class molecular chaperone with C-termina 98.56
PF0022664 DnaJ: DnaJ domain; InterPro: IPR001623 The prokary 98.49
PRK14288 369 chaperone protein DnaJ; Provisional 98.41
PRK14296 372 chaperone protein DnaJ; Provisional 98.34
PRK09430267 djlA Dna-J like membrane chaperone protein; Provis 98.33
PRK14279 392 chaperone protein DnaJ; Provisional 98.3
PRK14285 365 chaperone protein DnaJ; Provisional 98.28
KOG0718 546 consensus Molecular chaperone (DnaJ superfamily) [ 98.22
KOG0691 296 consensus Molecular chaperone (DnaJ superfamily) [ 98.2
PRK14299 291 chaperone protein DnaJ; Provisional 98.19
PRK14286 372 chaperone protein DnaJ; Provisional 98.18
PRK14295 389 chaperone protein DnaJ; Provisional 98.18
PRK14278 378 chaperone protein DnaJ; Provisional 98.17
PRK09510387 tolA cell envelope integrity inner membrane protei 98.17
PRK14277 386 chaperone protein DnaJ; Provisional 98.17
PRK10266 306 curved DNA-binding protein CbpA; Provisional 98.15
PRK14294 366 chaperone protein DnaJ; Provisional 98.15
PRK14283 378 chaperone protein DnaJ; Provisional 98.15
PRK14291 382 chaperone protein DnaJ; Provisional 98.15
PRK10767 371 chaperone protein DnaJ; Provisional 98.14
PTZ00037 421 DnaJ_C chaperone protein; Provisional 98.14
PRK14280 376 chaperone protein DnaJ; Provisional 98.13
PRK14276 380 chaperone protein DnaJ; Provisional 98.13
PRK14287 371 chaperone protein DnaJ; Provisional 98.13
PRK14282 369 chaperone protein DnaJ; Provisional 98.12
PRK14281 397 chaperone protein DnaJ; Provisional 98.1
PRK14301 373 chaperone protein DnaJ; Provisional 98.08
PRK14297 380 chaperone protein DnaJ; Provisional 98.07
PRK14298 377 chaperone protein DnaJ; Provisional 98.07
PRK14300 372 chaperone protein DnaJ; Provisional 98.07
KOG0717 508 consensus Molecular chaperone (DnaJ superfamily) [ 98.05
PRK14293 374 chaperone protein DnaJ; Provisional 98.01
PRK14290 365 chaperone protein DnaJ; Provisional 98.0
KOG0719 264 consensus Molecular chaperone (DnaJ superfamily) [ 97.95
COG2214 237 CbpA DnaJ-class molecular chaperone [Posttranslati 97.9
KOG0716 279 consensus Molecular chaperone (DnaJ superfamily) [ 97.9
PHA03102153 Small T antigen; Reviewed 97.88
PRK14289 386 chaperone protein DnaJ; Provisional 97.87
PRK05014 171 hscB co-chaperone HscB; Provisional 97.81
PTZ00341 1136 Ring-infected erythrocyte surface antigen; Provisi 97.79
KOG0715 288 consensus Molecular chaperone (DnaJ superfamily) [ 97.72
KOG1150 250 consensus Predicted molecular chaperone (DnaJ supe 97.71
COG3064387 TolA Membrane protein involved in colicin uptake [ 97.66
KOG0720 490 consensus Molecular chaperone (DnaJ superfamily) [ 97.64
PRK01356 166 hscB co-chaperone HscB; Provisional 97.62
PRK00294 173 hscB co-chaperone HscB; Provisional 97.61
KOG0721230 consensus Molecular chaperone (DnaJ superfamily) [ 97.61
PRK03578 176 hscB co-chaperone HscB; Provisional 97.6
TIGR00714 157 hscB Fe-S protein assembly co-chaperone HscB. This 97.56
PTZ00100116 DnaJ chaperone protein; Provisional 97.54
COG5407 610 SEC63 Preprotein translocase subunit Sec63 [Intrac 96.99
PHA02624 647 large T antigen; Provisional 96.97
KOG0550486 consensus Molecular chaperone (DnaJ superfamily) [ 96.96
KOG0714 306 consensus Molecular chaperone (DnaJ superfamily) [ 96.7
KOG0712 337 consensus Molecular chaperone (DnaJ superfamily) [ 96.66
PRK09510387 tolA cell envelope integrity inner membrane protei 96.64
TIGR02794346 tolA_full TolA protein. TolA couples the inner mem 96.42
PRK14284 391 chaperone protein DnaJ; Provisional 96.37
PRK01773 173 hscB co-chaperone HscB; Provisional 96.13
TIGR02349 354 DnaJ_bact chaperone protein DnaJ. This model repre 96.02
KOG0722 329 consensus Molecular chaperone (DnaJ superfamily) [ 95.89
PRK14292 371 chaperone protein DnaJ; Provisional 95.77
KOG0624504 consensus dsRNA-activated protein kinase inhibitor 95.7
KOG1789 2235 consensus Endocytosis protein RME-8, contains DnaJ 95.57
KOG0723112 consensus Molecular chaperone (DnaJ superfamily) [ 93.67
TIGR02794346 tolA_full TolA protein. TolA couples the inner mem 93.32
COG5269 379 ZUO1 Ribosome-associated chaperone zuotin [Transla 92.99
TIGR03835 871 termin_org_DnaJ terminal organelle assembly protei 92.98
COG3064387 TolA Membrane protein involved in colicin uptake [ 92.64
COG1076174 DjlA DnaJ-domain-containing proteins 1 [Posttransl 87.83
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only] Back     alignment and domain information 
Probab=100.00  E-value=1.9e-40  Score=364.33  Aligned_cols=145  Identities=55%  Similarity=0.886  Sum_probs=139.6

Q ss_pred             CCCCCcHHHhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH----HHhHHhhHHHHhhhhcCCCccHHHHHhhccc
Q 003099          703 GIEGESAQRCKARLERHRRTAERAAKALAEKNMRDLLAQREQAER----NRLAETLDADVKRWSSGKEGNLRALLSTLQY  778 (848)
Q Consensus       703 ~~~ge~~~R~kar~er~~rt~er~akalaEKn~rdl~~qkeqaER----~~l~d~Id~kI~~Wa~GKe~NIRaLLSTL~~  778 (848)
                      ..-|...+++..+..+++++..+...++..+.-+|+.-+++++++    .++++.||.+|..|+.||++|||||||||||
T Consensus       304 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~k~~~~~ae~~~e~~r~~e~~d~~I~~W~~GKE~NIRALLSTLh~  383 (453)
T KOG0431|consen  304 TERGKRAESSSTRTKKQMDTFSDLLNPQGFKSTSDEKRPREIAEMRKELSRLMEPLDEEIRRWSEGKEGNIRALLSTLHY  383 (453)
T ss_pred             ccccccccccccccchhhhhhhhhhccccccchhhhhhHHHHHHHHHHHHhhcchHHHHHHHhcccccccHHHHHHHHhH
Confidence            445888889999999999999999999999999999999999999    8999999999999999999999999999999


Q ss_pred             ccCCCCCCcccCccccCChhhHHHHHHhhhhhcCCCccccCCCChhHHHHHHHHHHHHHHHHHHhhhhc
Q 003099          779 ILGPDSGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNKFNSEE  847 (848)
Q Consensus       779 VLWp~~gWkpVgmtdL~tpaqVKKAYRKAiLkvHPDKl~q~gas~EqK~IAe~VF~~LneAwe~F~deE  847 (848)
                      ||||+|||+||+|+|||||++|||+||||||||||||++|+|++++|||||+.||++|++||+.|+..+
T Consensus       384 VLW~es~WqpVsltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~f~~~~  452 (453)
T KOG0431|consen  384 VLWPESGWQPVSLTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNKFNQQE  452 (453)
T ss_pred             hhcCccCcccCchhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHhhhccC
Confidence            999999999999999999999999999999999999999999999999999999999999999999765

>smart00271 DnaJ DnaJ molecular chaperone homology domain Back     alignment and domain information
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd06257 DnaJ DnaJ domain or J-domain Back     alignment and domain information
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein [] Back     alignment and domain information
>PRK14288 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14296 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional Back     alignment and domain information
>PRK14279 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14285 chaperone protein DnaJ; Provisional Back     alignment and domain information
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14299 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14286 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14295 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14278 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK09510 tolA cell envelope integrity inner membrane protein TolA; Provisional Back     alignment and domain information
>PRK14277 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK10266 curved DNA-binding protein CbpA; Provisional Back     alignment and domain information
>PRK14294 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14283 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14291 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK10767 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PTZ00037 DnaJ_C chaperone protein; Provisional Back     alignment and domain information
>PRK14280 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14276 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14287 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14282 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14281 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14301 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14297 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14298 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14300 chaperone protein DnaJ; Provisional Back     alignment and domain information
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14293 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14290 chaperone protein DnaJ; Provisional Back     alignment and domain information
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PHA03102 Small T antigen; Reviewed Back     alignment and domain information
>PRK14289 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK05014 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional Back     alignment and domain information
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG3064 TolA Membrane protein involved in colicin uptake [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK01356 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>PRK00294 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK03578 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB Back     alignment and domain information
>PTZ00100 DnaJ chaperone protein; Provisional Back     alignment and domain information
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] Back     alignment and domain information
>PHA02624 large T antigen; Provisional Back     alignment and domain information
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK09510 tolA cell envelope integrity inner membrane protein TolA; Provisional Back     alignment and domain information
>TIGR02794 tolA_full TolA protein Back     alignment and domain information
>PRK14284 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK01773 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>TIGR02349 DnaJ_bact chaperone protein DnaJ Back     alignment and domain information
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14292 chaperone protein DnaJ; Provisional Back     alignment and domain information
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] Back     alignment and domain information
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR02794 tolA_full TolA protein Back     alignment and domain information
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ Back     alignment and domain information
>COG3064 TolA Membrane protein involved in colicin uptake [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query848
3ag7_A106 An Auxilin-Like J-Domain Containing Protein, Jac1 J 4e-29
1n4c_A182 Nmr Structure Of The J-Domain And Clathrin Substrat 2e-11
1xi5_J114 Clathrin D6 Coat With Auxilin J-Domain Length = 114 3e-11
1nz6_A101 Crystal Structure Of Auxilin J-Domain Length = 101 4e-10
2qwo_B92 Crystal Structure Of Disulfide-Bond-Crosslinked Com 1e-09
2qwn_B94 Crystal Structure Of Disulfide-Bond-Crosslinked Com 2e-09
>pdb|3AG7|A Chain A, An Auxilin-Like J-Domain Containing Protein, Jac1 J-Domain Length = 106 Back     alignment and structure 
Iteration: 1

 Score =  127 bits (318), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 56/94 (59%), Positives = 77/94 (81%)
Query: 752 ETLDADVKRWSSGKEGNLRALLSTLQYILGPDSGWHPIPLTEVITSAAVKKAYRKATLCV 811
           + +DA +++WSSGK GN+R+LLSTLQYIL   SGW P+PL ++I   AV+K+Y++A L +
Sbjct: 9   KNIDAKIRKWSSGKSGNIRSLLSTLQYILWSGSGWKPVPLMDMIEGNAVRKSYQRALLIL 68
Query: 812 HPDKLQQRGASIQQKYICEKVFDLLKEAWNKFNS 845
           HPDKLQQ+GAS  QKY+ EKVF+LL+EAW+ FN+
Sbjct: 69  HPDKLQQKGASANQKYMAEKVFELLQEAWDHFNT 102
>pdb|1N4C|A Chain A, Nmr Structure Of The J-Domain And Clathrin Substrate Binding Domain Of Bovine Auxilin Length = 182 Back     alignment and structure
>pdb|1XI5|J Chain J, Clathrin D6 Coat With Auxilin J-Domain Length = 114 Back     alignment and structure
>pdb|1NZ6|A Chain A, Crystal Structure Of Auxilin J-Domain Length = 101 Back     alignment and structure
>pdb|2QWO|B Chain B, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin (810-910aa)d876c In The AdpPi Form #1 Length = 92 Back     alignment and structure
>pdb|2QWN|B Chain B, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin (810-910aa)d876c In The AdpPi State Length = 94 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query848
3ag7_A106 Putative uncharacterized protein F9E10.5; J-domain 3e-34
1n4c_A182 Auxilin; four helix bundle, protein binding; NMR { 3e-32
2qwo_B92 Putative tyrosine-protein phosphatase auxilin; cha 6e-28
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-06
2zuo_A861 MVP, major vault protein; repeat domains, protein- 4e-08
2zuo_A861 MVP, major vault protein; repeat domains, protein- 2e-07
2zuo_A861 MVP, major vault protein; repeat domains, protein- 2e-06
2zuo_A861 MVP, major vault protein; repeat domains, protein- 1e-05
2zuo_A861 MVP, major vault protein; repeat domains, protein- 1e-05
2zuo_A861 MVP, major vault protein; repeat domains, protein- 7e-04
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 1e-06
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 2e-04
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 4e-04
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 1e-04
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Length = 106 Back     alignment and structure
 Score =  125 bits (315), Expect = 3e-34
 Identities = 56/100 (56%), Positives = 78/100 (78%)

Query: 747 RNRLAETLDADVKRWSSGKEGNLRALLSTLQYILGPDSGWHPIPLTEVITSAAVKKAYRK 806
            +   + +DA +++WSSGK GN+R+LLSTLQYIL   SGW P+PL ++I   AV+K+Y++
Sbjct: 4   GSEEIKNIDAKIRKWSSGKSGNIRSLLSTLQYILWSGSGWKPVPLMDMIEGNAVRKSYQR 63

Query: 807 ATLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNKFNSE 846
           A L +HPDKLQQ+GAS  QKY+ EKVF+LL+EAW+ FN+ 
Sbjct: 64  ALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTL 103
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Length = 182 Back     alignment and structure
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Length = 92 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861 Back     alignment and structure
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861 Back     alignment and structure
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861 Back     alignment and structure
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861 Back     alignment and structure
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861 Back     alignment and structure
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query848
2qwo_B92 Putative tyrosine-protein phosphatase auxilin; cha 99.91
3ag7_A106 Putative uncharacterized protein F9E10.5; J-domain 99.88
1n4c_A182 Auxilin; four helix bundle, protein binding; NMR { 99.81
2ys8_A90 RAB-related GTP-binding protein RABJ; DNAJ domain, 98.79
1wjz_A94 1700030A21RIK protein; J-domain, DNAJ like protein 98.75
1hdj_A77 Human HSP40, HDJ-1; molecular chaperone; NMR {Homo 98.59
2dn9_A79 DNAJ homolog subfamily A member 3; J-domain, TID1, 98.58
2ej7_A82 HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati 98.56
2cug_A88 Mkiaa0962 protein; DNAJ-like domain, structural ge 98.56
2yua_A99 Williams-beuren syndrome chromosome region 18 prot 98.54
1iur_A88 KIAA0730 protein; DNAJ like domain, riken structur 98.52
2ctp_A78 DNAJ homolog subfamily B member 12; J-domain, chap 98.52
2dmx_A92 DNAJ homolog subfamily B member 8; DNAJ J domain, 98.49
2ctr_A88 DNAJ homolog subfamily B member 9; J-domain, chape 98.48
2ctq_A112 DNAJ homolog subfamily C member 12; J-domain, chap 98.46
2ctw_A109 DNAJ homolog subfamily C member 5; J-domain, chape 98.43
2qsa_A109 DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s 98.43
3bvo_A207 CO-chaperone protein HSCB, mitochondrial precurso; 98.42
2och_A73 Hypothetical protein DNJ-12; HSP40, J-domain, chap 98.41
2lgw_A99 DNAJ homolog subfamily B member 2; J domain, HSJ1A 98.41
1bq0_A103 DNAJ, HSP40; chaperone, heat shock, protein foldin 98.4
2l6l_A155 DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, 98.38
1fpo_A 171 HSC20, chaperone protein HSCB; molecular chaperone 98.35
1faf_A79 Large T antigen; J domain, HPD motif, anti-paralle 98.34
2o37_A92 Protein SIS1; HSP40, J-domain, cochaperone, APC900 98.31
3hho_A 174 CO-chaperone protein HSCB homolog; structural geno 98.31
2guz_A71 Mitochondrial import inner membrane translocase su 98.26
1gh6_A114 Large T antigen; tumor suppressor, oncoprotein, an 98.19
3apq_A 210 DNAJ homolog subfamily C member 10; thioredoxin fo 98.18
3lz8_A 329 Putative chaperone DNAJ; structure genomics, struc 98.05
3uo3_A 181 J-type CO-chaperone JAC1, mitochondrial; structura 97.85
2pf4_E 174 Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, 97.75
3apo_A 780 DNAJ homolog subfamily C member 10; PDI family, th 97.3
2guz_B65 Mitochondrial import inner membrane translocase su 97.22
2y4t_A450 DNAJ homolog subfamily C member 3; chaperone, endo 97.01
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Back     alignment and structure
Probab=99.91  E-value=1.7e-25  Score=199.64  Aligned_cols=91  Identities=35%  Similarity=0.669  Sum_probs=83.9

Q ss_pred             HhhHHHHhhhhcCCCccHHHHHhhcccccCCC-CCCcccCccccCChhhHHHHHHhhhhhcCCCccccCCCChhHHHHHH
Q 003099          752 ETLDADVKRWSSGKEGNLRALLSTLQYILGPD-SGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICE  830 (848)
Q Consensus       752 d~Id~kI~~Wa~GKe~NIRaLLSTL~~VLWp~-~gWkpVgmtdL~tpaqVKKAYRKAiLkvHPDKl~q~gas~EqK~IAe  830 (848)
                      |.|+.+|..|+.||++|||+||+|||.||||+ ++|+.|||+.++|+.+||+||||+++++||||+++.    ...++|+
T Consensus         1 ~~i~~~i~~W~~gk~~~ir~lL~~l~~~L~~~~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~----~~~~~A~   76 (92)
T 2qwo_B            1 DPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQ----PYEQYAK   76 (92)
T ss_dssp             CHHHHHHHHHHHHHTTCHHHHHHHGGGTSCTTCCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTS----TTHHHHH
T ss_pred             ChHHHHHHHHHccChhHHHHHHHHHHHHhcccccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc----hhHhHHH
Confidence            46899999999999999999999999999995 999999999999999999999999999999999742    2346899


Q ss_pred             HHHHHHHHHHHHhhhh
Q 003099          831 KVFDLLKEAWNKFNSE  846 (848)
Q Consensus       831 ~VF~~LneAwe~F~de  846 (848)
                      .+|..|++||++|.++
T Consensus        77 ~~F~~i~eAyevL~~~   92 (92)
T 2qwo_B           77 MIFMELNDAWSEFENQ   92 (92)
T ss_dssp             HHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHhC
Confidence            9999999999999864
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Back     alignment and structure
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Back     alignment and structure
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Back     alignment and structure
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Back     alignment and structure
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Back     alignment and structure
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Back     alignment and structure
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Back     alignment and structure
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Back     alignment and structure
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Back     alignment and structure
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Back     alignment and structure
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Back     alignment and structure
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Back     alignment and structure
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Back     alignment and structure
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Back     alignment and structure
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Back     alignment and structure
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Back     alignment and structure
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Back     alignment and structure
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Back     alignment and structure
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Back     alignment and structure
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Back     alignment and structure
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Back     alignment and structure
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Back     alignment and structure
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 848
d1nz6a_98 a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T 3e-17
>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98 Back     information, alignment and structure

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 75.7 bits (186), Expect = 3e-17
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 5/96 (5%)

Query: 754 LDADVKRWSSGKEGNLRALLSTLQYILGP-DSGWHPIPLTEVITSAAVKKAYRKATLCVH 812
               +  W  GKE N+RALLST+  +L   ++ W P+ + +++T   VKK YRKA L VH
Sbjct: 3   EKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVH 62

Query: 813 PDKLQQRGASIQQKYICEKVFDLLKEAWNKFNSEER 848
           PDK          +   + +F  L +AW++F ++ +
Sbjct: 63  PDK----ATGQPYEQYAKMIFMELNDAWSEFENQGQ 94

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query848
d1nz6a_98 Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} 99.9
d1wjza_94 CSL-type zinc finger-containing protein 3 (J-domai 98.78
d1xbla_75 DnaJ chaperone, N-terminal (J) domain {Escherichia 98.7
d1iura_88 Hypothetical protein KIAA0730 {Human (Homo sapiens 98.51
d1fpoa176 HSC20 (HSCB), N-terminal (J) domain {Escherichia c 98.48
d1gh6a_114 Large T antigen, the N-terminal J domain {Simian v 98.46
d1fafa_79 Large T antigen, the N-terminal J domain {Murine p 98.35
d1hdja_77 HSP40 {Human (Homo sapiens) [TaxId: 9606]} 98.32
>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.90  E-value=1.5e-24  Score=192.44  Aligned_cols=93  Identities=35%  Similarity=0.686  Sum_probs=85.2

Q ss_pred             HhhHHHHhhhhcCCCccHHHHHhhcccccCCC-CCCcccCccccCChhhHHHHHHhhhhhcCCCccccCCCChhHHHHHH
Q 003099          752 ETLDADVKRWSSGKEGNLRALLSTLQYILGPD-SGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICE  830 (848)
Q Consensus       752 d~Id~kI~~Wa~GKe~NIRaLLSTL~~VLWp~-~gWkpVgmtdL~tpaqVKKAYRKAiLkvHPDKl~q~gas~EqK~IAe  830 (848)
                      |.|..+|..|+.|+.+|||+||+||+.|||++ +.|++|||++++|+++||++||++++.+||||++..    ....+|+
T Consensus         1 d~~~~~i~~W~~~~~~~ir~lL~~l~~vl~~~~~~y~~Lgl~~~~t~~eIk~aYr~l~~~~HPDk~~~~----~~~~~a~   76 (98)
T d1nz6a_           1 DPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQ----PYEQYAK   76 (98)
T ss_dssp             CHHHHHHHHHHTTTTTCHHHHHTTGGGTSCTTCCSCCCCCGGGCCSHHHHHHHHHHHHHHSCHHHHTTS----TTHHHHH
T ss_pred             ChHHHHHHHHHhcchhhHHHHHHhhhhhcCCcccCCeecCCCccCCHHHHHHHHHHHHHHhccccCCCh----HHHHHHH
Confidence            46788999999999999999999999999986 799999999999999999999999999999998743    2456799


Q ss_pred             HHHHHHHHHHHHhhhhcC
Q 003099          831 KVFDLLKEAWNKFNSEER  848 (848)
Q Consensus       831 ~VF~~LneAwe~F~deEr  848 (848)
                      .+|..|++||++|++.++
T Consensus        77 ~~f~~I~~Ay~~L~d~~~   94 (98)
T d1nz6a_          77 MIFMELNDAWSEFENQGQ   94 (98)
T ss_dssp             HHHHHHHHHHHHHHTTTC
T ss_pred             HHHHHHHHHHHHHCCHHH
Confidence            999999999999999864
>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Back     information, alignment and structure
>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Back     information, alignment and structure
>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure