Citrus Sinensis ID: 003103
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 847 | 2.2.26 [Sep-21-2011] | |||||||
| Q7XPY2 | 951 | Plasma membrane ATPase OS | yes | no | 0.940 | 0.838 | 0.895 | 0.0 | |
| Q03194 | 952 | Plasma membrane ATPase 4 | N/A | no | 0.942 | 0.838 | 0.883 | 0.0 | |
| Q9SJB3 | 949 | ATPase 5, plasma membrane | yes | no | 0.937 | 0.836 | 0.872 | 0.0 | |
| P83970 | 951 | Plasma membrane ATPase OS | N/A | no | 0.940 | 0.838 | 0.875 | 0.0 | |
| P20649 | 949 | ATPase 1, plasma membrane | no | no | 0.937 | 0.836 | 0.875 | 0.0 | |
| P19456 | 948 | ATPase 2, plasma membrane | no | no | 0.938 | 0.838 | 0.872 | 0.0 | |
| Q9M2A0 | 948 | ATPase 8, plasma membrane | no | no | 0.938 | 0.838 | 0.852 | 0.0 | |
| P20431 | 949 | ATPase 3, plasma membrane | no | no | 0.940 | 0.839 | 0.860 | 0.0 | |
| Q9SH76 | 949 | ATPase 6, plasma membrane | no | no | 0.938 | 0.837 | 0.849 | 0.0 | |
| Q42556 | 954 | ATPase 9, plasma membrane | no | no | 0.946 | 0.840 | 0.840 | 0.0 |
| >sp|Q7XPY2|PMA1_ORYSJ Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 1442 bits (3733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 718/802 (89%), Positives = 767/802 (95%), Gaps = 5/802 (0%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
MGG LEEIKNE+VDLE IPIEEVFEQLKC+REGL+S+EG R+ +FGPNKLEEKKE
Sbjct: 1 MGG-----LEEIKNEAVDLENIPIEEVFEQLKCTREGLSSEEGNRRIEMFGPNKLEEKKE 55
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK+LKFLGFMWNPLSWVME AAIMAIALANGGG+ PDW+DFVGIIVLLVINSTISFIEEN
Sbjct: 56 SKILKFLGFMWNPLSWVMEMAAIMAIALANGGGKPPDWEDFVGIIVLLVINSTISFIEEN 115
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMANLAPKTKVLRDGRW EQ+A+ILVPGD+ISIKLGDIVPADARLLEGDPLK
Sbjct: 116 NAGNAAAALMANLAPKTKVLRDGRWGEQEAAILVPGDIISIKLGDIVPADARLLEGDPLK 175
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTKNP DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 176 IDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 235
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQ VLTAIGNFCICSIAVGIV EII+M+P+QHR YR GI+NLLVLLIGGIPIAMPTVLSV
Sbjct: 236 FQTVLTAIGNFCICSIAVGIVIEIIVMFPIQHRAYRSGIENLLVLLIGGIPIAMPTVLSV 295
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSH+LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NL+EVF KGV+K
Sbjct: 296 TMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFTKGVDK 355
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
+HV+LLAARASRTENQDAIDAA+VGMLADPKEARAG+REVHFLPFNPVDKRTALTYID+D
Sbjct: 356 DHVLLLAARASRTENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDAD 415
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQIL LCNC+EDV++KVHAVIDK+AERGLRSL VARQE+PEK+KES G
Sbjct: 416 GNWHRASKGAPEQILTLCNCKEDVKRKVHAVIDKYAERGLRSLAVARQEVPEKSKESAGG 475
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLLPLFDPPRHDSAETIR+AL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 476 PWQFVGLLPLFDPPRHDSAETIRKALHLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 535
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQ+KDAS+ ALPVDELIEKADGFAGVFPEHKYEIVKRLQE+KHI GMTGDGVNDAPA
Sbjct: 536 ALLGQNKDASLEALPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPA 595
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSR IFQRMKNYTIYAVSITIR
Sbjct: 596 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIR 655
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IVLGF+LIALIWK+DFSPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATG+V
Sbjct: 656 IVLGFLLIALIWKYDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIV 715
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LGSYLA+MTV+FFW M KTDFF+D FGVRS+R EMM+ALYLQVSI+SQALIFVTRSR
Sbjct: 716 LGSYLALMTVIFFWAMHKTDFFTDKFGVRSIRNSEHEMMSALYLQVSIVSQALIFVTRSR 775
Query: 781 SWSFIERPGLLLATAFVIAQLV 802
SWSFIERPGLLL TAF++AQLV
Sbjct: 776 SWSFIERPGLLLVTAFMLAQLV 797
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Oryza sativa subsp. japonica (taxid: 39947) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 6 |
| >sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4 OS=Nicotiana plumbaginifolia GN=PMA4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1427 bits (3693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 705/798 (88%), Positives = 760/798 (95%)
Query: 5 KAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVL 64
KAISLEEIKNE+VDLE+IPIEEVFEQLKC+REGL++DEGA RL +FGPNKLEEK ESK+L
Sbjct: 3 KAISLEEIKNETVDLEKIPIEEVFEQLKCTREGLSADEGASRLQIFGPNKLEEKNESKIL 62
Query: 65 KFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGN 124
KFLGFMWNPLSWVMEAAA+MAIALANG G+ PDWQDF+GII LLVINSTISFIEENNAGN
Sbjct: 63 KFLGFMWNPLSWVMEAAAVMAIALANGDGKPPDWQDFIGIICLLVINSTISFIEENNAGN 122
Query: 125 AAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQS 184
AAAALMA LAPKTKVLRDGRWSEQ+A+ILVPGD+IS+KLGDI+PADARLLEGDPLKIDQS
Sbjct: 123 AAAALMAGLAPKTKVLRDGRWSEQEAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQS 182
Query: 185 ALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKV 244
ALTGESLPVTKNP DEVFSGSTCKQGE+EAVVIATGVHTFFGKAAHLVDSTN VGHFQKV
Sbjct: 183 ALTGESLPVTKNPGDEVFSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKV 242
Query: 245 LTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 304
LTAIGNFCICSIA+G++ EII+MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI
Sbjct: 243 LTAIGNFCICSIAIGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 302
Query: 305 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVI 364
GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNL+EVFAKGV+KE+V+
Sbjct: 303 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLVEVFAKGVDKEYVL 362
Query: 365 LLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWH 424
LLAARASR ENQDAIDA +VGMLADPKEARAG+REVHFLPFNPVDKRTALTYID++ NWH
Sbjct: 363 LLAARASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDNNNNWH 422
Query: 425 RASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQL 484
RASKGAPEQIL LCN +EDVR+KVH+++DK+AERGLRSL VAR+ +PEK+KESPG W+
Sbjct: 423 RASKGAPEQILDLCNAKEDVRRKVHSMMDKYAERGLRSLAVARRTVPEKSKESPGGRWEF 482
Query: 485 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG 544
VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPS+SLLG
Sbjct: 483 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLG 542
Query: 545 QDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKA 604
QDKD++IA+LP++ELIEKADGFAGVFPEHKYEIVK+LQERKHI GMTGDGVNDAPALKKA
Sbjct: 543 QDKDSAIASLPIEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKA 602
Query: 605 DIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLG 664
DIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV G
Sbjct: 603 DIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFG 662
Query: 665 FMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSY 724
FM IALIWK+DFS FMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLG Y
Sbjct: 663 FMFIALIWKYDFSAFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFATGVVLGGY 722
Query: 725 LAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSF 784
A+MTVVFFW M TDFFSD FGV+SLR +EMM+ALYLQVSIISQALIFVTRSRSWSF
Sbjct: 723 QALMTVVFFWAMHDTDFFSDKFGVKSLRNSDEEMMSALYLQVSIISQALIFVTRSRSWSF 782
Query: 785 IERPGLLLATAFVIAQLV 802
+ERPG+LL AF+IAQLV
Sbjct: 783 LERPGMLLVIAFMIAQLV 800
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9SJB3|PMA5_ARATH ATPase 5, plasma membrane-type OS=Arabidopsis thaliana GN=AHA5 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 1423 bits (3684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 693/794 (87%), Positives = 749/794 (94%)
Query: 9 LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLG 68
L+ IKNESVDL RIP+EEVFE+LKC+++GLT++E +HRL VFGPNKLEEKKESK+LKFLG
Sbjct: 4 LDHIKNESVDLVRIPMEEVFEELKCTKQGLTANEASHRLDVFGPNKLEEKKESKLLKFLG 63
Query: 69 FMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAA 128
FMWNPLSWVME AA+MAIALANGGGR PDWQDFVGI+ LL+INSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEVAALMAIALANGGGRPPDWQDFVGIVCLLLINSTISFIEENNAGNAAAA 123
Query: 129 LMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTG 188
LMA LAPKTKVLRD +WSEQ+ASILVPGDVISIKLGDI+PADARLL+GDPLKIDQS+LTG
Sbjct: 124 LMAGLAPKTKVLRDNQWSEQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSSLTG 183
Query: 189 ESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248
ES+PVTKNP DEVFSGS CKQGEIEA+VIATGVHTFFGKAAHLVD+TNQ+GHFQKVLT+I
Sbjct: 184 ESIPVTKNPSDEVFSGSICKQGEIEAIVIATGVHTFFGKAAHLVDNTNQIGHFQKVLTSI 243
Query: 249 GNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 308
GNFCICSIA+GI+ E+++MYP+Q R+YRDGIDNLLVLLIGGIPIAMP+VLSVTMA GSHR
Sbjct: 244 GNFCICSIALGIIVELLVMYPIQRRRYRDGIDNLLVLLIGGIPIAMPSVLSVTMATGSHR 303
Query: 309 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAA 368
L QQGAITKRMTAIEEMAGMDVLC DKTGTLTLNKLTVD+NL+EVFAKGV KEHV LLAA
Sbjct: 304 LFQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAA 363
Query: 369 RASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASK 428
RASR ENQDAIDAAIVGMLADPKEARAGVREVHF PFNPVDKRTALTY+DSDGNWHRASK
Sbjct: 364 RASRIENQDAIDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASK 423
Query: 429 GAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLL 488
GAPEQIL LCNC+EDVR+KVH VIDKFAERGLRSL VARQE+ EK K++PG PWQLVGLL
Sbjct: 424 GAPEQILNLCNCKEDVRRKVHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGLL 483
Query: 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKD 548
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQ KD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKD 543
Query: 549 ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608
+S+ ALPVDELIEKADGFAGVFPEHKYEIV RLQ+R HICGMTGDGVNDAPALKKADIGI
Sbjct: 544 SSLGALPVDELIEKADGFAGVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGI 603
Query: 609 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI 668
AV DATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFM I
Sbjct: 604 AVVDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFI 663
Query: 669 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIM 728
ALIW+FDFSPFMVLIIAILNDGTIMTISKDR+KPSPQPDSWKL++IF+TGVVLG Y A+M
Sbjct: 664 ALIWQFDFSPFMVLIIAILNDGTIMTISKDRMKPSPQPDSWKLRDIFSTGVVLGGYQALM 723
Query: 729 TVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERP 788
TVVFFW+M+ +DFFS+ FGVR L RP++MMAALYLQVSIISQALIFVTRSRSWS+ E P
Sbjct: 724 TVVFFWVMKDSDFFSNYFGVRPLSQRPEQMMAALYLQVSIISQALIFVTRSRSWSYAECP 783
Query: 789 GLLLATAFVIAQLV 802
GLLL AFVIAQLV
Sbjct: 784 GLLLLGAFVIAQLV 797
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P83970|PMA1_WHEAT Plasma membrane ATPase OS=Triticum aestivum GN=ha1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1409 bits (3646), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 702/802 (87%), Positives = 758/802 (94%), Gaps = 5/802 (0%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
MGG LEEI+NE+VDLE IPIEEVFEQLKC+R+GLTSDEGA R+ +FG NKLEEKKE
Sbjct: 1 MGG-----LEEIRNEAVDLENIPIEEVFEQLKCTRQGLTSDEGAQRVEIFGLNKLEEKKE 55
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SKVLKFLGFMWNPLSWVME AAIMAIALANGGG+ PDWQDFVGIIVLLVINSTISFIEEN
Sbjct: 56 SKVLKFLGFMWNPLSWVMEMAAIMAIALANGGGKPPDWQDFVGIIVLLVINSTISFIEEN 115
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMANLAPKTKVLRDGRW EQ+ASILVPGD++SIKLGDIVPADARLLEGDPLK
Sbjct: 116 NAGNAAAALMANLAPKTKVLRDGRWGEQEASILVPGDIVSIKLGDIVPADARLLEGDPLK 175
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQS LTGESLPVTKNP DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 176 IDQSGLTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 235
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQ+VLTAIGNFCI SIAVGIV EII+M+P+Q RKYR GI+NLLVLLIGGIPIAMPTVLSV
Sbjct: 236 FQQVLTAIGNFCIVSIAVGIVIEIIVMFPIQRRKYRAGIENLLVLLIGGIPIAMPTVLSV 295
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSH+LSQQGAITKRMTAIEE+AGMDVLCSDKTGTLTLNKL+VD+NL+EVFAKGV+K
Sbjct: 296 TMAIGSHKLSQQGAITKRMTAIEELAGMDVLCSDKTGTLTLNKLSVDKNLVEVFAKGVDK 355
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHV+LLAARASR ENQDAIDA +VGMLADPKEARAG+REVHFLPFNP DKRTALTYID++
Sbjct: 356 EHVLLLAARASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPTDKRTALTYIDAE 415
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQI+ LCNC+EDV++KVH+VI+K+AERGLRSL VARQE+PEK+K+SPG
Sbjct: 416 GNWHRASKGAPEQIITLCNCKEDVKRKVHSVIEKYAERGLRSLAVARQEVPEKSKDSPGG 475
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ +GLLPLFDPPRHDSAETIR+AL LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 476 PWQFIGLLPLFDPPRHDSAETIRKALVLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 535
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQ KD S+ +LPVDELIEKADGFAGVFPEHKYEIVKRLQE+KHI GMTGDGVNDAPA
Sbjct: 536 ALLGQSKDGSLESLPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPA 595
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAV DATDAARSASDIVLTEPGLSVIISAVLTSR IFQRMKNYTIYAVSITIR
Sbjct: 596 LKKADIGIAVDDATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIR 655
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IVLGFMLIALIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFATGVV
Sbjct: 656 IVLGFMLIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLNEIFATGVV 715
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LG+YLA++TVVFFWL+ KTDFF++ FGV S+R + M+ALYLQVSI+SQALIFVTRSR
Sbjct: 716 LGTYLALVTVVFFWLIHKTDFFTNKFGVESIRNTEFKEMSALYLQVSIVSQALIFVTRSR 775
Query: 781 SWSFIERPGLLLATAFVIAQLV 802
SWSF+ERPG LL TAF++AQLV
Sbjct: 776 SWSFVERPGFLLVTAFLLAQLV 797
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Triticum aestivum (taxid: 4565) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P20649|PMA1_ARATH ATPase 1, plasma membrane-type OS=Arabidopsis thaliana GN=AHA1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 1395 bits (3612), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 695/794 (87%), Positives = 746/794 (93%)
Query: 9 LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLG 68
LE+IKNE+VDLE+IPIEEVF+QLKC+REGLT+ EG R+ +FGPNKLEEKKESK+LKFLG
Sbjct: 4 LEDIKNETVDLEKIPIEEVFQQLKCTREGLTTQEGEDRIVIFGPNKLEEKKESKILKFLG 63
Query: 69 FMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAA 128
FMWNPLSWVMEAAA+MAIALANG R PDWQDFVGII LLVINSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEAAALMAIALANGDNRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAA 123
Query: 129 LMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTG 188
LMA LAPKTKVLRDG+WSEQ+A+ILVPGD++SIKLGDI+PADARLLEGDPLK+DQSALTG
Sbjct: 124 LMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTG 183
Query: 189 ESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248
ESLPVTK+P EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT+I
Sbjct: 184 ESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTSI 243
Query: 249 GNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 308
GNFCICSIA+GI EI++MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 244 GNFCICSIAIGIAIEIVVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 303
Query: 309 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAA 368
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NL+EVF KGVEK+ V+L AA
Sbjct: 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAA 363
Query: 369 RASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASK 428
ASR ENQDAIDAA+VGMLADPKEARAG+REVHFLPFNPVDKRTALTYIDSDGNWHR SK
Sbjct: 364 MASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRVSK 423
Query: 429 GAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLL 488
GAPEQIL L N R D+RKKV + IDK+AERGLRSL VARQ +PEKTKESPG PW+ VGLL
Sbjct: 424 GAPEQILDLANARPDLRKKVLSCIDKYAERGLRSLAVARQVVPEKTKESPGGPWEFVGLL 483
Query: 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKD 548
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS++LLG DKD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSAALLGTDKD 543
Query: 549 ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608
++IA++PV+ELIEKADGFAGVFPEHKYEIVK+LQERKHI GMTGDGVNDAPALKKADIGI
Sbjct: 544 SNIASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGI 603
Query: 609 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI 668
AVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFMLI
Sbjct: 604 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLI 663
Query: 669 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIM 728
ALIW+FDFS FMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATG+VLG Y AIM
Sbjct: 664 ALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGIVLGGYQAIM 723
Query: 729 TVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERP 788
+V+FFW KTDFFSD FGVRS+R DE+M A+YLQVSIISQALIFVTRSRSWSF+ERP
Sbjct: 724 SVIFFWAAHKTDFFSDKFGVRSIRDNNDELMGAVYLQVSIISQALIFVTRSRSWSFVERP 783
Query: 789 GLLLATAFVIAQLV 802
G LL AFVIAQLV
Sbjct: 784 GALLMIAFVIAQLV 797
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P19456|PMA2_ARATH ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=AHA2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1391 bits (3601), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 694/795 (87%), Positives = 742/795 (93%)
Query: 8 SLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFL 67
SLE+IKNE+VDLE+IPIEEVF+QLKCSREGLT+ EG R+ +FGPNKLEEKKESK+LKFL
Sbjct: 3 SLEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFL 62
Query: 68 GFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAA 127
GFMWNPLSWVME AAIMAIALANG GR PDWQDFVGII LLVINSTISFIEENNAGNAAA
Sbjct: 63 GFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAA 122
Query: 128 ALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALT 187
ALMA LAPKTKVLRDG+WSEQ+A+ILVPGD++SIKLGDI+PADARLLEGDPLK+DQSALT
Sbjct: 123 ALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALT 182
Query: 188 GESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 247
GESLPVTK+P EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA
Sbjct: 183 GESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 242
Query: 248 IGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 307
IGNFCICSIA+G+V EII+MYP+Q RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH
Sbjct: 243 IGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 302
Query: 308 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLA 367
RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NL+EVF KGVEK+ V+L A
Sbjct: 303 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFA 362
Query: 368 ARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRAS 427
A ASR ENQDAIDAA+VGMLADPKEARAG+REVHFLPFNPVDKRTALTYID GNWHR S
Sbjct: 363 AMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVS 422
Query: 428 KGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487
KGAPEQIL L D+ KKV ++IDK+AERGLRSL VARQ +PEKTKESPGAPW+ VGL
Sbjct: 423 KGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGL 482
Query: 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDK 547
LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLG K
Sbjct: 483 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHK 542
Query: 548 DASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607
DA++A++PV+ELIEKADGFAGVFPEHKYEIVK+LQERKHI GMTGDGVNDAPALKKADIG
Sbjct: 543 DANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIG 602
Query: 608 IAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 667
IAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFML
Sbjct: 603 IAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFML 662
Query: 668 IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAI 727
IALIW+FDFS FMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLG Y AI
Sbjct: 663 IALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQAI 722
Query: 728 MTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIER 787
MTV+FFW KTDFFSD FGVRS+R E+M A+YLQVSIISQALIFVTRSRSWSF+ER
Sbjct: 723 MTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRSRSWSFVER 782
Query: 788 PGLLLATAFVIAQLV 802
PG LL AF+IAQL+
Sbjct: 783 PGALLMIAFLIAQLI 797
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9M2A0|PMA8_ARATH ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=AHA8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1385 bits (3586), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 678/795 (85%), Positives = 739/795 (92%)
Query: 8 SLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFL 67
S +EIK E+VDLERIP+EEVFEQLKCS+EGL+SDEGA RL +FG NKLEEK E+K LKFL
Sbjct: 6 SWDEIKKENVDLERIPVEEVFEQLKCSKEGLSSDEGAKRLEIFGANKLEEKSENKFLKFL 65
Query: 68 GFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAA 127
GFMWNPLSWVME+AAIMAI LANGGG+ PDWQDF+GI+VLL+INSTISFIEENNAGNAAA
Sbjct: 66 GFMWNPLSWVMESAAIMAIVLANGGGKAPDWQDFIGIMVLLIINSTISFIEENNAGNAAA 125
Query: 128 ALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALT 187
ALMANLAPKTKVLRDG+W EQ+ASILVPGD+ISIKLGDIVPADARLLEGDPLKIDQSALT
Sbjct: 126 ALMANLAPKTKVLRDGKWGEQEASILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALT 185
Query: 188 GESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 247
GESLP TK+P DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKVLT+
Sbjct: 186 GESLPTTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTS 245
Query: 248 IGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 307
IGNFCICSI +G++ EI+IMYP+QHR YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH
Sbjct: 246 IGNFCICSIGLGMLIEILIMYPIQHRTYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 305
Query: 308 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLA 367
RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD++LIEVF K ++ + V+L+A
Sbjct: 306 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPKNMDSDSVVLMA 365
Query: 368 ARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRAS 427
ARASR ENQDAIDA+IVGML DPKEARAG+ EVHFLPFNPVDKRTA+TYID G+WHR+S
Sbjct: 366 ARASRIENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDESGDWHRSS 425
Query: 428 KGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487
KGAPEQI+ LCN + + ++K H VID FAERGLRSLGVA+Q +PEKTKES G+PW+ VGL
Sbjct: 426 KGAPEQIIELCNLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKESDGSPWEFVGL 485
Query: 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDK 547
LPLFDPPRHDSAETIRRAL LGVNVKMITGDQLAIG ETGRRLGMGTNMYPS+SLLG K
Sbjct: 486 LPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNMYPSTSLLGNSK 545
Query: 548 DASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607
D S+ +P+DELIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPALKKADIG
Sbjct: 546 DESLVGIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG 605
Query: 608 IAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 667
IAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML
Sbjct: 606 IAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 665
Query: 668 IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAI 727
+ALIW+FDF+PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFATGVVLG+Y+A+
Sbjct: 666 VALIWRFDFAPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLNEIFATGVVLGTYMAL 725
Query: 728 MTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIER 787
TV+FFWL TDFFS FGVRS++ +E+MAALYLQVSIISQALIFVTRSRSWSF+ER
Sbjct: 726 TTVLFFWLAHDTDFFSKTFGVRSIQGNEEELMAALYLQVSIISQALIFVTRSRSWSFVER 785
Query: 788 PGLLLATAFVIAQLV 802
PG LL AFVIAQLV
Sbjct: 786 PGFLLLIAFVIAQLV 800
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P20431|PMA3_ARATH ATPase 3, plasma membrane-type OS=Arabidopsis thaliana GN=AHA3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1382 bits (3577), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 686/797 (86%), Positives = 741/797 (92%)
Query: 6 AISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLK 65
A LE+I NE+VDLE+IPIEEVF+QLKCSREGL+ EG +RL +FGPNKLEEKKESK+LK
Sbjct: 2 ASGLEDIVNENVDLEKIPIEEVFQQLKCSREGLSGAEGENRLQIFGPNKLEEKKESKLLK 61
Query: 66 FLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNA 125
FLGFMWNPLSWVMEAAAIMAIALANGGG+ PDWQDFVGI+ LLVINSTISF+EENNAGNA
Sbjct: 62 FLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVCLLVINSTISFVEENNAGNA 121
Query: 126 AAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSA 185
AAALMA LAPKTKVLRDG+WSEQ+ASILVPGD++SIKLGDI+PADARLLEGDPLK+DQSA
Sbjct: 122 AAALMAGLAPKTKVLRDGKWSEQEASILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSA 181
Query: 186 LTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 245
LTGESLP TK P +EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL
Sbjct: 182 LTGESLPATKGPGEEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 241
Query: 246 TAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 305
TAIGNFCICSIAVGI EI++MYP+Q R YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG
Sbjct: 242 TAIGNFCICSIAVGIAIEIVVMYPIQRRHYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 301
Query: 306 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVIL 365
SH+LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NLIEV+ KGVEK+ V+L
Sbjct: 302 SHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVYCKGVEKDEVLL 361
Query: 366 LAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHR 425
AARASR ENQDAIDAA+VGMLADPKEARAG+RE+HFLPFNPVDKRTALT+IDS+GNWHR
Sbjct: 362 FAARASRVENQDAIDAAMVGMLADPKEARAGIREIHFLPFNPVDKRTALTFIDSNGNWHR 421
Query: 426 ASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLV 485
SKGAPEQIL LCN R D+RK+VH+ IDK+AERGLRSL V+RQ +PEKTKES G+PW+ V
Sbjct: 422 VSKGAPEQILDLCNARADLRKRVHSTIDKYAERGLRSLAVSRQTVPEKTKESSGSPWEFV 481
Query: 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQ 545
G+LPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAI KETGRRLGMG+NMYPSSSLLG+
Sbjct: 482 GVLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLGK 541
Query: 546 DKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKAD 605
KD ++A +PV++LIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPALKKAD
Sbjct: 542 HKDEAMAHIPVEDLIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKAD 601
Query: 606 IGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGF 665
IGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GF
Sbjct: 602 IGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGF 661
Query: 666 MLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYL 725
MLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLG Y+
Sbjct: 662 MLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYM 721
Query: 726 AIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFI 785
AIMTVVFFW KTDFF F VR LR EMM+ALYLQVSI+SQALIFVTRSRSWSF
Sbjct: 722 AIMTVVFFWAAYKTDFFPRTFHVRDLRGSEHEMMSALYLQVSIVSQALIFVTRSRSWSFT 781
Query: 786 ERPGLLLATAFVIAQLV 802
ERPG L AF +AQL+
Sbjct: 782 ERPGYFLLIAFWVAQLI 798
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9SH76|PMA6_ARATH ATPase 6, plasma membrane-type OS=Arabidopsis thaliana GN=AHA6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1374 bits (3556), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 676/796 (84%), Positives = 740/796 (92%), Gaps = 1/796 (0%)
Query: 7 ISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKF 66
IS +EIK E+VDLE+IP++EVF+QLKCSREGL+S+EG +RL +FG NKLEEK E+K LKF
Sbjct: 5 ISWDEIKKENVDLEKIPVDEVFQQLKCSREGLSSEEGRNRLQIFGANKLEEKVENKFLKF 64
Query: 67 LGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAA 126
LGFMWNPLSWVMEAAAIMAI LANGGGR PDWQDFVGI LL+INSTISFIEENNAGNAA
Sbjct: 65 LGFMWNPLSWVMEAAAIMAIVLANGGGRPPDWQDFVGITCLLIINSTISFIEENNAGNAA 124
Query: 127 AALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSAL 186
AALMANLAPKTKVLRDGRW EQ+A+ILVPGD+ISIKLGDIVPADARLLEGDPLKIDQSAL
Sbjct: 125 AALMANLAPKTKVLRDGRWGEQEAAILVPGDLISIKLGDIVPADARLLEGDPLKIDQSAL 184
Query: 187 TGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT 246
TGESLP TK+ DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKVLT
Sbjct: 185 TGESLPATKHQGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLT 244
Query: 247 AIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 306
AIGNFCICSI +G++ EIIIMYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS
Sbjct: 245 AIGNFCICSIGIGMLIEIIIMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 304
Query: 307 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILL 366
HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD+NLIEVF+K V+K++VILL
Sbjct: 305 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFSKDVDKDYVILL 364
Query: 367 AARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRA 426
+ARASR ENQDAID +IV ML DPKEARAG+ EVHFLPFNPV+KRTA+TYID++G WHR
Sbjct: 365 SARASRVENQDAIDTSIVNMLGDPKEARAGITEVHFLPFNPVEKRTAITYIDTNGEWHRC 424
Query: 427 SKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVG 486
SKGAPEQI+ LC+ + + +++ H +IDKFAERGLRSLGVARQ +PEK KES G PW+ VG
Sbjct: 425 SKGAPEQIIELCDLKGETKRRAHEIIDKFAERGLRSLGVARQRVPEKDKESAGTPWEFVG 484
Query: 487 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQD 546
LLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL ++
Sbjct: 485 LLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL-EN 543
Query: 547 KDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI 606
KD + +PVDELIEKADGFAGVFPEHKYEIV++LQERKHI GMTGDGVNDAPALKKADI
Sbjct: 544 KDDTTGGVPVDELIEKADGFAGVFPEHKYEIVRKLQERKHIVGMTGDGVNDAPALKKADI 603
Query: 607 GIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 666
GIAV DATDAARSASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM
Sbjct: 604 GIAVDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 663
Query: 667 LIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLA 726
L+ALIW+FDFSPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLG+Y+A
Sbjct: 664 LVALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPIPDSWKLKEIFATGVVLGTYMA 723
Query: 727 IMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE 786
++TVVFFWL T FFSD FGVRSL+ + +E++A LYLQVSIISQALIFVTRSRSWSF+E
Sbjct: 724 LVTVVFFWLAHDTTFFSDKFGVRSLQGKDEELIAVLYLQVSIISQALIFVTRSRSWSFVE 783
Query: 787 RPGLLLATAFVIAQLV 802
RPGLLL AF +AQL+
Sbjct: 784 RPGLLLLIAFFVAQLI 799
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q42556|PMA9_ARATH ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=AHA9 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 1368 bits (3541), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 674/802 (84%), Positives = 738/802 (92%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
M G+K S ++IKNE +DLE+IPIEEV QL+C+REGLTSDEG RL +FGPNKLEEKKE
Sbjct: 1 MAGNKDSSWDDIKNEGIDLEKIPIEEVLTQLRCTREGLTSDEGQTRLEIFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
+KVLKFLGFMWNPLSWVME AAIMAIALANGGGR PDWQDFVGI VLL+INSTISFIEEN
Sbjct: 61 NKVLKFLGFMWNPLSWVMELAAIMAIALANGGGRPPDWQDFVGITVLLIINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDG+WSEQ+A+ILVPGD+ISIKLGDIVPAD RLL+GDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIVPADGRLLDGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTK+P EV+SGSTCKQGE+EAVVIATGVHTFFGKAAHLVDSTNQ GH
Sbjct: 181 IDQSALTGESLPVTKHPGQEVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNQEGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIA+G++ EI++MYP+Q R YRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAIGMLIEIVVMYPIQKRAYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD++++EVF K ++K
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMVEVFVKDLDK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
+ +++ AARASR ENQDAIDA IVGML DP+EAR G+ EVHF PFNPVDKRTA+TYID++
Sbjct: 361 DQLLVNAARASRVENQDAIDACIVGMLGDPREAREGITEVHFFPFNPVDKRTAITYIDAN 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHR SKGAPEQI+ LCN RED K+ H +IDKFA+RGLRSL V RQ + EK K SPG
Sbjct: 421 GNWHRVSKGAPEQIIELCNLREDASKRAHDIIDKFADRGLRSLAVGRQTVSEKDKNSPGE 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ +GLLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 481 PWQFLGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQDKD SIA+LPVDELIEKADGFAGVFPEHKYEIVKRLQE KHICGMTGDGVNDAPA
Sbjct: 541 ALLGQDKDESIASLPVDELIEKADGFAGVFPEHKYEIVKRLQEMKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LK+ADIGIAVADATDAARSASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV+GFML+ALIWKFDFSPFMVLI+AILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVV
Sbjct: 661 IVMGFMLLALIWKFDFSPFMVLIVAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVV 720
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LG+YLA+MTVVFFW TDFFS FGVRS+ P E+ AA+YLQVSI+SQALIFVTRSR
Sbjct: 721 LGTYLAVMTVVFFWAAESTDFFSAKFGVRSISGNPHELTAAVYLQVSIVSQALIFVTRSR 780
Query: 781 SWSFIERPGLLLATAFVIAQLV 802
SWS++ERPG L +AF +AQL+
Sbjct: 781 SWSYVERPGFWLISAFFMAQLI 802
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 847 | ||||||
| 392055980 | 954 | plasma membrane H+-ATPase [Malus xiaojin | 0.946 | 0.840 | 0.928 | 0.0 | |
| 6759597 | 954 | plasma membrane H+ ATPase [Prunus persic | 0.946 | 0.840 | 0.925 | 0.0 | |
| 224121346 | 955 | autoinhibited H+ ATPase [Populus trichoc | 0.946 | 0.839 | 0.921 | 0.0 | |
| 147800127 | 954 | hypothetical protein VITISV_014422 [Viti | 0.946 | 0.840 | 0.901 | 0.0 | |
| 225446002 | 954 | PREDICTED: plasma membrane ATPase 4 isof | 0.946 | 0.840 | 0.901 | 0.0 | |
| 449499538 | 955 | PREDICTED: LOW QUALITY PROTEIN: plasma m | 0.946 | 0.839 | 0.911 | 0.0 | |
| 225429772 | 954 | PREDICTED: plasma membrane ATPase 4 isof | 0.946 | 0.840 | 0.920 | 0.0 | |
| 224142101 | 954 | predicted protein [Populus trichocarpa] | 0.946 | 0.840 | 0.917 | 0.0 | |
| 356552575 | 951 | PREDICTED: plasma membrane ATPase 4-like | 0.943 | 0.840 | 0.920 | 0.0 | |
| 356563778 | 951 | PREDICTED: ATPase 5, plasma membrane-typ | 0.966 | 0.861 | 0.891 | 0.0 |
| >gi|392055980|gb|AFM52333.1| plasma membrane H+-ATPase [Malus xiaojinensis] | Back alignment and taxonomy information |
|---|
Score = 1497 bits (3876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 745/802 (92%), Positives = 778/802 (97%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
M GDKAISLEEIKNESVDLERIP+EEVFEQLKC+REGLT +EGA+RL VFGPNKLEEKKE
Sbjct: 1 MAGDKAISLEEIKNESVDLERIPVEEVFEQLKCTREGLTGEEGANRLQVFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK+LKFLGFMWNPLSWVMEAAA+MAIALANGGGR PDWQDFVGI+VLLVINSTISFIEEN
Sbjct: 61 SKLLKFLGFMWNPLSWVMEAAALMAIALANGGGRPPDWQDFVGIVVLLVINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDGRW+EQDASILVPGD+ISIKLGDIVPADARLLEGDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGRWTEQDASILVPGDIISIKLGDIVPADARLLEGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTKNP DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQVGH
Sbjct: 181 IDQSALTGESLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDNTNQVGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVGI+ EII+MYP+Q RKYR GIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAVGILIEIIVMYPIQKRKYRQGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNLIEVFAKGVEK
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFAKGVEK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHV+LLAARASRTENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYIDSD
Sbjct: 361 EHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSD 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQIL LCNC+ED +KKVH VIDKFAERGLRSLGVARQ++PEKTKESPG
Sbjct: 421 GNWHRASKGAPEQILTLCNCKEDFKKKVHGVIDKFAERGLRSLGVARQQVPEKTKESPGT 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 481 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQ+KDA+IA+LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA
Sbjct: 541 ALLGQNKDAAIASLPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV GFMLIALIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATG+V
Sbjct: 661 IVFGFMLIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGIV 720
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LG YLA+MTVVFFWLM TDFFS+ F VRSLR RP++MMAALYLQVSI+SQALIFVTRSR
Sbjct: 721 LGGYLALMTVVFFWLMNDTDFFSEKFHVRSLRDRPEQMMAALYLQVSIVSQALIFVTRSR 780
Query: 781 SWSFIERPGLLLATAFVIAQLV 802
SWSF+ERPGLLL AF+IAQLV
Sbjct: 781 SWSFVERPGLLLLGAFMIAQLV 802
|
Source: Malus xiaojinensis Species: Malus xiaojinensis Genus: Malus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|6759597|emb|CAB69823.1| plasma membrane H+ ATPase [Prunus persica] | Back alignment and taxonomy information |
|---|
Score = 1493 bits (3864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 742/802 (92%), Positives = 777/802 (96%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
MGGDKAISLEEIKNESVDLERIPIEEVFEQLKC+REGLT DEGA+RL VFGPNKLEEKKE
Sbjct: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCTREGLTGDEGANRLQVFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK+LKFLGFMWNPLSWVMEAAA+MAIALANGGGR PDWQDFVGI+VLLVINSTISFIEEN
Sbjct: 61 SKLLKFLGFMWNPLSWVMEAAAVMAIALANGGGRPPDWQDFVGIVVLLVINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDGRW+EQ+ASILVPGD+ISIKLGDIVPADARLLEGDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGRWTEQEASILVPGDIISIKLGDIVPADARLLEGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTKNP +EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 181 IDQSALTGESLPVTKNPSEEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVGI+ E+I+MYP+Q RKYRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAVGILIELIVMYPIQKRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNLIEVFAKGVEK
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFAKGVEK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHV+LLAARASRTENQDAIDAAIVGMLADPKEAR G+REVHFLPFNPVDKRTALTYIDSD
Sbjct: 361 EHVMLLAARASRTENQDAIDAAIVGMLADPKEARVGIREVHFLPFNPVDKRTALTYIDSD 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQILALCNC+ED +K+VHAVIDKFAERGLRSL VARQ++PEKTKESPG
Sbjct: 421 GNWHRASKGAPEQILALCNCKEDFKKRVHAVIDKFAERGLRSLAVARQQVPEKTKESPGT 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 481 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQDKDASIA+LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA
Sbjct: 541 ALLGQDKDASIASLPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV GFM IALIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATG+V
Sbjct: 661 IVFGFMFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGIV 720
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LG Y+A+MTVVFFWLM+ T FFS+ F VR L RP++MMAALYLQVSI+SQALIFVTRSR
Sbjct: 721 LGGYMALMTVVFFWLMKDTKFFSNTFNVRHLGDRPEQMMAALYLQVSIVSQALIFVTRSR 780
Query: 781 SWSFIERPGLLLATAFVIAQLV 802
SWSF+ERPGLLL AF++AQLV
Sbjct: 781 SWSFVERPGLLLLGAFMVAQLV 802
|
Source: Prunus persica Species: Prunus persica Genus: Prunus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224121346|ref|XP_002330804.1| autoinhibited H+ ATPase [Populus trichocarpa] gi|222872606|gb|EEF09737.1| autoinhibited H+ ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1486 bits (3846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 739/802 (92%), Positives = 775/802 (96%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
M ISLEEIKNESVDLERIP+EEVFEQLKC+REGL++DEGA RL VFGPNKLEEKKE
Sbjct: 1 MSSKGGISLEEIKNESVDLERIPMEEVFEQLKCTREGLSADEGASRLQVFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK+LKFLGFMWNPLSWVMEAAA+MAIALANG GR PDWQDFVGI+VLLVINSTISFIEEN
Sbjct: 61 SKILKFLGFMWNPLSWVMEAAALMAIALANGDGRPPDWQDFVGIVVLLVINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDGRWSEQDASILVPGD+ISIKLGDIVPADARLLEGDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGRWSEQDASILVPGDIISIKLGDIVPADARLLEGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTKNP DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 181 IDQSALTGESLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVGI+AE+I+MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAVGIIAELIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD +LIEVFAKGVEK
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDTSLIEVFAKGVEK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHV+LLAARASRTENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYIDSD
Sbjct: 361 EHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSD 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQIL LCNC+EDV+KKVH+VIDKFAERGLRSLGVA+QE+PEK+K++ GA
Sbjct: 421 GNWHRASKGAPEQILTLCNCKEDVKKKVHSVIDKFAERGLRSLGVAKQEVPEKSKDAAGA 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQLVGLLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 481 PWQLVGLLPLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA
Sbjct: 541 ALLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV GFM IALIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIF+TG+V
Sbjct: 661 IVFGFMFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFSTGIV 720
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LG Y+A+MTV+FFW+M+ TDFFSD FGVRSLR +EMMAALYLQVSI+SQALIFVTRSR
Sbjct: 721 LGGYMALMTVLFFWIMKDTDFFSDKFGVRSLRNNDEEMMAALYLQVSIVSQALIFVTRSR 780
Query: 781 SWSFIERPGLLLATAFVIAQLV 802
SWSF+ERPG LL AFV AQLV
Sbjct: 781 SWSFVERPGFLLLGAFVAAQLV 802
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147800127|emb|CAN64375.1| hypothetical protein VITISV_014422 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1482 bits (3837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 723/802 (90%), Positives = 769/802 (95%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
MGGDK+ISLEEIKNE+VDLE+IPIEEVFEQLKC++EGLTS EG RL +FGPNKLEEKKE
Sbjct: 1 MGGDKSISLEEIKNETVDLEKIPIEEVFEQLKCTKEGLTSQEGEARLQIFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK LKFLGFMWNPLSWVMEAAA+MAI LANG G+ PDWQDFVGI+ LLVINSTISFIEEN
Sbjct: 61 SKFLKFLGFMWNPLSWVMEAAALMAIVLANGDGQPPDWQDFVGIVCLLVINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDGRWSEQDA+ILVPGD+ISIKLGDI+PADARLLEGDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
+DQSALTGESLPVTK+P DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 181 VDQSALTGESLPVTKHPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVG++ EII+MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNL+EVFAKGV+K
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLVEVFAKGVDK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHV+LLAARASRTENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYID+D
Sbjct: 361 EHVLLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDAD 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
G WHRASKGAPEQIL LC C+EDV+KK H++IDKFAERGLRSL V RQE+PEK+KES G+
Sbjct: 421 GKWHRASKGAPEQILDLCKCKEDVKKKAHSIIDKFAERGLRSLAVGRQEVPEKSKESLGS 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPS+
Sbjct: 481 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSA 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
SLLGQDKDASIAALPV+ELIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPA
Sbjct: 541 SLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV GF+ IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL+EIFATGVV
Sbjct: 661 IVFGFLFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVV 720
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LG YLA+MTV+FFW+M+ TDFF D FGV+S+R P EMMAALYLQVS++SQALIFVTRSR
Sbjct: 721 LGGYLALMTVIFFWVMKDTDFFPDKFGVKSIRDSPHEMMAALYLQVSVVSQALIFVTRSR 780
Query: 781 SWSFIERPGLLLATAFVIAQLV 802
SWSF+ERPGLLL TAF+IAQLV
Sbjct: 781 SWSFVERPGLLLVTAFIIAQLV 802
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225446002|ref|XP_002267501.1| PREDICTED: plasma membrane ATPase 4 isoform 1 [Vitis vinifera] gi|297735422|emb|CBI17862.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1482 bits (3836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 723/802 (90%), Positives = 769/802 (95%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
MGGDK+ISLEEIKNE+VDLE+IPIEEVFEQLKC++EGLTS EG RL +FGPNKLEEKKE
Sbjct: 1 MGGDKSISLEEIKNETVDLEKIPIEEVFEQLKCTKEGLTSQEGEARLQIFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK LKFLGFMWNPLSWVMEAAA+MAI LANG G+ PDWQDFVGI+ LLVINSTISFIEEN
Sbjct: 61 SKFLKFLGFMWNPLSWVMEAAALMAIVLANGDGQPPDWQDFVGIVCLLVINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDGRWSEQDA+ILVPGD+ISIKLGDI+PADARLLEGDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
+DQSALTGESLPVTK+P DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 181 VDQSALTGESLPVTKHPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVG++ EII+MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNL+EVFAKGV+K
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLVEVFAKGVDK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHV+LLAARASRTENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYID+D
Sbjct: 361 EHVLLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDAD 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
G WHRASKGAPEQIL LC C+EDV+KK H++IDKFAERGLRSL V RQE+PEK+KES G+
Sbjct: 421 GKWHRASKGAPEQILDLCKCKEDVKKKAHSIIDKFAERGLRSLAVGRQEVPEKSKESLGS 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPS+
Sbjct: 481 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSA 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
SLLGQDKDASIAALPV+ELIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPA
Sbjct: 541 SLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV GF+ IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL+EIFATGVV
Sbjct: 661 IVFGFLFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVV 720
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LG YLA+MTV+FFW+M+ TDFF D FGV+S+R P EMMAALYLQVS++SQALIFVTRSR
Sbjct: 721 LGGYLALMTVIFFWVMKDTDFFPDKFGVKSIRDSPHEMMAALYLQVSVVSQALIFVTRSR 780
Query: 781 SWSFIERPGLLLATAFVIAQLV 802
SWSF+ERPGLLL TAF+IAQLV
Sbjct: 781 SWSFVERPGLLLVTAFIIAQLV 802
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449499538|ref|XP_004160843.1| PREDICTED: LOW QUALITY PROTEIN: plasma membrane ATPase 4-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1481 bits (3833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 732/803 (91%), Positives = 769/803 (95%), Gaps = 1/803 (0%)
Query: 1 MGGD-KAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKK 59
MGGD KAI+LEEIKNE+VDLE IPIEEVFEQLKC+REGLTS+EGAHRL VFGPNKLEEKK
Sbjct: 1 MGGDHKAITLEEIKNEAVDLEHIPIEEVFEQLKCTREGLTSEEGAHRLQVFGPNKLEEKK 60
Query: 60 ESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEE 119
ESK+LKFLGFMWNPLSWVMEAAA+MAI LANGGGR PDWQDFVGII LL INSTISFIEE
Sbjct: 61 ESKLLKFLGFMWNPLSWVMEAAALMAIVLANGGGRPPDWQDFVGIIALLFINSTISFIEE 120
Query: 120 NNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPL 179
NNAGNAAAALMA LAPKTKVLRDGRWSEQ+A+ILVPGD+ISIKLGDI+PADARLLEGDPL
Sbjct: 121 NNAGNAAAALMAGLAPKTKVLRDGRWSEQEAAILVPGDIISIKLGDIIPADARLLEGDPL 180
Query: 180 KIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVG 239
KIDQSALTGESLPVTKNP DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVG
Sbjct: 181 KIDQSALTGESLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVG 240
Query: 240 HFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLS 299
HFQKVLTAIGNFCICSIAVGI+ E+I+MYP+Q RKYRDGIDNLLVLLIGGIPIAMPTVLS
Sbjct: 241 HFQKVLTAIGNFCICSIAVGILIELIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLS 300
Query: 300 VTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVE 359
VTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDR+LIEVF KGVE
Sbjct: 301 VTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRSLIEVFVKGVE 360
Query: 360 KEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDS 419
KE+VILLAARASRTENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYIDS
Sbjct: 361 KEYVILLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDS 420
Query: 420 DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPG 479
+G WHR SKGAPEQIL LCN REDVR+KVHAVIDKFAERGLRSLGVARQE+ EK K+SPG
Sbjct: 421 NGTWHRVSKGAPEQILNLCNSREDVRRKVHAVIDKFAERGLRSLGVARQEVHEKXKDSPG 480
Query: 480 APWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS 539
PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPS
Sbjct: 481 GPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS 540
Query: 540 SSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAP 599
SSLLGQDKD SIA+LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAP
Sbjct: 541 SSLLGQDKDESIASLPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAP 600
Query: 600 ALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 659
ALKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI
Sbjct: 601 ALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 660
Query: 660 RIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGV 719
RIV GFM IALIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIF TG+
Sbjct: 661 RIVFGFMFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFGTGI 720
Query: 720 VLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRS 779
VLG YLA+MTV+FFW ++ T+FFS+ F V+SL+ P+E+MAALYLQVSIISQALIFVTRS
Sbjct: 721 VLGGYLALMTVLFFWAVKDTNFFSEKFNVKSLKDSPEELMAALYLQVSIISQALIFVTRS 780
Query: 780 RSWSFIERPGLLLATAFVIAQLV 802
RSWS++ERPGLLL AF+IAQLV
Sbjct: 781 RSWSYMERPGLLLVGAFIIAQLV 803
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225429772|ref|XP_002282619.1| PREDICTED: plasma membrane ATPase 4 isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1481 bits (3833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 738/802 (92%), Positives = 770/802 (96%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
M DK+I LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGA RL +FGPNKLEEKKE
Sbjct: 1 MAADKSIGLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGASRLQIFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGG+ PDWQDFVGIIVLL+INSTISFIEEN
Sbjct: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGQPPDWQDFVGIIVLLLINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDGRW+EQDA+ILVPGD+ISIKLGDIVPADARLLEGDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGRWTEQDAAILVPGDIISIKLGDIVPADARLLEGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTKNP DEVFSGSTCKQGEI+AVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 181 IDQSALTGESLPVTKNPSDEVFSGSTCKQGEIDAVVIATGVHTFFGKAAHLVDSTNQVGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVG++ EII+MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAVGMIIEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF KGVEK
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFTKGVEK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHVILLAARASR ENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYID+D
Sbjct: 361 EHVILLAARASRIENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDAD 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
G WHRASKGAPEQIL LCNC+EDVRKKVH VIDKFAERGLRSL VARQE+PEKTK++PGA
Sbjct: 421 GTWHRASKGAPEQILNLCNCKEDVRKKVHGVIDKFAERGLRSLAVARQEVPEKTKDAPGA 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLL LFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSS
Sbjct: 481 PWQFVGLLSLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSS 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPA
Sbjct: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV GF+ IALIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATG+V
Sbjct: 661 IVFGFLFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGIV 720
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LG YLA+MTVVFFW+M+ TDFF + FGV+S+R EMMAALYLQVSI+SQALIFVTRSR
Sbjct: 721 LGGYLALMTVVFFWVMKDTDFFPEKFGVKSIRYSEHEMMAALYLQVSIVSQALIFVTRSR 780
Query: 781 SWSFIERPGLLLATAFVIAQLV 802
SWS++ERPGLLL AF+ AQLV
Sbjct: 781 SWSYVERPGLLLVGAFIAAQLV 802
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224142101|ref|XP_002324397.1| predicted protein [Populus trichocarpa] gi|222865831|gb|EEF02962.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1475 bits (3818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 736/802 (91%), Positives = 774/802 (96%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
M ISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGA RL VFGPNKLEEKKE
Sbjct: 1 MSSKGGISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGATRLQVFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK+LKFLGFMWNPLSWVMEAAA+MAI LANG GR PDWQDFVGI+VLLVINSTISFIEEN
Sbjct: 61 SKILKFLGFMWNPLSWVMEAAALMAIVLANGDGRPPDWQDFVGIVVLLVINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDGRWSEQDA+ILVPGD+ISIKLGDIVPADARLLEGDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGRWSEQDAAILVPGDIISIKLGDIVPADARLLEGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTKNP DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 181 IDQSALTGESLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIA+GI+ EI++MYP+Q RKYRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAIGIIIEIVVMYPIQKRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD++LIEVFAKGVEK
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSLIEVFAKGVEK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHV+LLAARASRTENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYID++
Sbjct: 361 EHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDNN 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQIL LCNC+EDV++KVH+VIDKFAERGLRSLGVA+QE+PEK+K++PGA
Sbjct: 421 GNWHRASKGAPEQILTLCNCKEDVKRKVHSVIDKFAERGLRSLGVAKQEVPEKSKDAPGA 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQLVGLLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAI KETGRRLGMGTNMYPSS
Sbjct: 481 PWQLVGLLPLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSS 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
SLLGQDKDA+IAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA
Sbjct: 541 SLLGQDKDAAIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV GFM IALIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIF+TGVV
Sbjct: 661 IVFGFMFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFSTGVV 720
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LG YLA+MTV+FFW+M+ TDFFSD FGVRSLR EMMAALYLQVSI+SQALIFVTRSR
Sbjct: 721 LGGYLALMTVLFFWIMKDTDFFSDKFGVRSLRDSKYEMMAALYLQVSIVSQALIFVTRSR 780
Query: 781 SWSFIERPGLLLATAFVIAQLV 802
SWSF+ERPGLLL +AFV+AQL+
Sbjct: 781 SWSFVERPGLLLVSAFVVAQLI 802
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356552575|ref|XP_003544641.1| PREDICTED: plasma membrane ATPase 4-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1472 bits (3810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 738/802 (92%), Positives = 772/802 (96%), Gaps = 3/802 (0%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
MGG ISLEEIKNE+VDLERIPIEEVFEQLKCSR GLTS+EGA+RL VFGPNKLEEKKE
Sbjct: 1 MGG---ISLEEIKNENVDLERIPIEEVFEQLKCSRAGLTSEEGANRLQVFGPNKLEEKKE 57
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK LKFLGFMWNPLSWVMEAAAIMAIALANGGGR PDWQDFVGII LLVINSTISFIEEN
Sbjct: 58 SKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIIALLVINSTISFIEEN 117
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRD RWSEQDA+ILVPGD+ISIKLGDI+PADARLLEGDPL
Sbjct: 118 NAGNAAAALMAGLAPKTKVLRDNRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLS 177
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
+DQSALTGESLPVTK+P DEVFSGST K+GEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 178 VDQSALTGESLPVTKSPSDEVFSGSTVKKGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 237
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVGI E+I+MYP+QHR+YR+GIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 238 FQKVLTAIGNFCICSIAVGIAIELIVMYPIQHRRYREGIDNLLVLLIGGIPIAMPTVLSV 297
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNLIEVFAKGVEK
Sbjct: 298 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFAKGVEK 357
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
E+VILLAARASRTENQDAIDAAIVGMLADPKEAR+GVREVHFLPFNPVDKRTALTYIDSD
Sbjct: 358 EYVILLAARASRTENQDAIDAAIVGMLADPKEARSGVREVHFLPFNPVDKRTALTYIDSD 417
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQI+ LCNC+EDVR+KVHAVIDKFAERGLRSLGVARQE+PEK+K+SPG
Sbjct: 418 GNWHRASKGAPEQIITLCNCKEDVRRKVHAVIDKFAERGLRSLGVARQEVPEKSKDSPGG 477
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 478 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 537
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQDKDASI+ALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA
Sbjct: 538 ALLGQDKDASISALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 597
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 598 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 657
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV GF+ IALIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL+EIFATGVV
Sbjct: 658 IVFGFLFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVV 717
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LGSY+A+MTVVFFW M+ T+FFS+ FGVR LR PDEMMAALYLQVSIISQALIFVTRSR
Sbjct: 718 LGSYMALMTVVFFWAMKDTNFFSNKFGVRPLRDSPDEMMAALYLQVSIISQALIFVTRSR 777
Query: 781 SWSFIERPGLLLATAFVIAQLV 802
SWSF+ERPGLLL AF IAQLV
Sbjct: 778 SWSFVERPGLLLLGAFFIAQLV 799
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356563778|ref|XP_003550136.1| PREDICTED: ATPase 5, plasma membrane-type-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1469 bits (3804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 739/829 (89%), Positives = 777/829 (93%), Gaps = 10/829 (1%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
MGG ISLEEIKNE+VDLERIPIEEVFEQLKCSR GLTS+EG +RL VFGPNKLEEKKE
Sbjct: 1 MGG---ISLEEIKNENVDLERIPIEEVFEQLKCSRAGLTSEEGGNRLQVFGPNKLEEKKE 57
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK LKFLGFMWNPLSWVMEAAAIMAIALANGGGR PDWQDFVGII LLVINSTISFIEEN
Sbjct: 58 SKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIIALLVINSTISFIEEN 117
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRD RWSEQDA+ILVPGD+ISIKLGDI+PADARLLEGDPL
Sbjct: 118 NAGNAAAALMAGLAPKTKVLRDNRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLS 177
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
+DQSALTGESLPVTK+P DEVFSGST K+GEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 178 VDQSALTGESLPVTKSPSDEVFSGSTVKKGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 237
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVGIV E+I+MYP+QHR+YRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 238 FQKVLTAIGNFCICSIAVGIVIELIVMYPIQHRRYRDGIDNLLVLLIGGIPIAMPTVLSV 297
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNLIEVFAKGVEK
Sbjct: 298 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFAKGVEK 357
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
E+VILLAARASRTENQDAIDAAIVGMLADPKEAR+G+REVHFLPFNPVDKRTALTYIDSD
Sbjct: 358 EYVILLAARASRTENQDAIDAAIVGMLADPKEARSGIREVHFLPFNPVDKRTALTYIDSD 417
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQI+ LCNC+EDVR+KVHAVIDKFAERGLRSLGVARQE+PEK+K+SPG
Sbjct: 418 GNWHRASKGAPEQIITLCNCKEDVRRKVHAVIDKFAERGLRSLGVARQEVPEKSKDSPGG 477
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 478 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 537
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQDKDASI+ALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA
Sbjct: 538 ALLGQDKDASISALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 597
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 598 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 657
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV GF+ IALIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL+EIFATGVV
Sbjct: 658 IVFGFLFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVV 717
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LGSY+A+MTVVFFW M+ T+FFS+ FGVR L PD+MMAALYLQVSIISQALIFVTRSR
Sbjct: 718 LGSYMALMTVVFFWAMKDTNFFSNKFGVRPLSDSPDKMMAALYLQVSIISQALIFVTRSR 777
Query: 781 SWSFIERPGLLLATAFVIAQLVRVHFHLTNLNTTIHMGSSFVSVHDFSW 829
SWSF+ERPGLLL AF IAQLV ++ SF + W
Sbjct: 778 SWSFVERPGLLLLGAFFIAQLVATFI-------AVYANWSFARIKGMGW 819
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 847 | ||||||
| TAIR|locus:2046623 | 949 | HA5 "H(+)-ATPase 5" [Arabidops | 0.937 | 0.836 | 0.806 | 0.0 | |
| TAIR|locus:2044450 | 949 | HA1 "H(+)-ATPase 1" [Arabidops | 0.937 | 0.836 | 0.806 | 0.0 | |
| TAIR|locus:2165600 | 949 | HA3 "H(+)-ATPase 3" [Arabidops | 0.940 | 0.839 | 0.790 | 0.0 | |
| TAIR|locus:2096549 | 948 | HA8 "H(+)-ATPase 8" [Arabidops | 0.938 | 0.838 | 0.784 | 0.0 | |
| TAIR|locus:2025727 | 954 | HA9 "H(+)-ATPase 9" [Arabidops | 0.946 | 0.840 | 0.770 | 0.0 | |
| TAIR|locus:2053343 | 949 | HA6 "H(+)-ATPase 6" [Arabidops | 0.938 | 0.837 | 0.781 | 0.0 | |
| TAIR|locus:2172244 | 956 | HA11 "H(+)-ATPase 11" [Arabido | 0.944 | 0.836 | 0.777 | 0.0 | |
| TAIR|locus:2097895 | 960 | HA4 "H(+)-ATPase 4" [Arabidops | 0.937 | 0.827 | 0.771 | 0.0 | |
| TAIR|locus:2081932 | 961 | HA7 "H(+)-ATPase 7" [Arabidops | 0.935 | 0.824 | 0.695 | 1.3e-299 | |
| TAIR|locus:2020372 | 947 | AHA10 "autoinhibited H(+)-ATPa | 0.933 | 0.835 | 0.700 | 1.5e-298 |
| TAIR|locus:2046623 HA5 "H(+)-ATPase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3319 (1173.4 bits), Expect = 0., P = 0.
Identities = 640/794 (80%), Positives = 694/794 (87%)
Query: 9 LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXG 68
L+ IKNESVDL RIP+EEVFE+LKC+++GLT++E +HRL VFGPN G
Sbjct: 4 LDHIKNESVDLVRIPMEEVFEELKCTKQGLTANEASHRLDVFGPNKLEEKKESKLLKFLG 63
Query: 69 FMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXXX 128
FMWNPLSWVME NGGGR PDWQDFVGI+ LL+INSTISFIEE
Sbjct: 64 FMWNPLSWVMEVAALMAIALANGGGRPPDWQDFVGIVCLLLINSTISFIEENNAGNAAAA 123
Query: 129 XXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTG 188
PKTKVLRD +WSEQ+ASILVPGDVISIKLGDI+PADARLL+GDPLKIDQS+LTG
Sbjct: 124 LMAGLAPKTKVLRDNQWSEQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSSLTG 183
Query: 189 ESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248
ES+PVTKNP DEVFSGS CKQGEIEA+VIATGVHTFFGKAAHLVD+TNQ+GHFQKVLT+I
Sbjct: 184 ESIPVTKNPSDEVFSGSICKQGEIEAIVIATGVHTFFGKAAHLVDNTNQIGHFQKVLTSI 243
Query: 249 GNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 308
GNFCICSIA+GI+ E+++MYP+Q R+YRDGIDNLLVLLIGGIPIAMP+VLSVTMA GSHR
Sbjct: 244 GNFCICSIALGIIVELLVMYPIQRRRYRDGIDNLLVLLIGGIPIAMPSVLSVTMATGSHR 303
Query: 309 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAA 368
L QQGAITKRMTAIEEMAGMDVLC DKTGTLTLNKLTVD+NL+EVFAKGV KEHV LLAA
Sbjct: 304 LFQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAA 363
Query: 369 RASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASK 428
RASR ENQDAIDAAIVGMLADPKEARAGVREVHF PFNPVDKRTALTY+DSDGNWHRASK
Sbjct: 364 RASRIENQDAIDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASK 423
Query: 429 GAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLL 488
GAPEQIL LCNC+EDVR+KVH VIDKFAERGLRSL VARQE+ EK K++PG PWQLVGLL
Sbjct: 424 GAPEQILNLCNCKEDVRRKVHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGLL 483
Query: 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKD 548
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQ KD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKD 543
Query: 549 ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXXX 608
+S+ ALPVDELIEKADGFAGVFPEHKYEIV RLQ+R HICGMTGDGVNDAPALKK
Sbjct: 544 SSLGALPVDELIEKADGFAGVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGI 603
Query: 609 XXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI 668
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFM I
Sbjct: 604 AVVDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFI 663
Query: 669 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIM 728
ALIW+FDFSPFMVLIIAILNDGTIMTISKDR+KPSPQPDSWKL++IF+TGVVLG Y A+M
Sbjct: 664 ALIWQFDFSPFMVLIIAILNDGTIMTISKDRMKPSPQPDSWKLRDIFSTGVVLGGYQALM 723
Query: 729 TVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERP 788
TVVFFW+M+ +DFFS+ FGVR L RP++MMAALYLQVSIISQALIFVTRSRSWS+ E P
Sbjct: 724 TVVFFWVMKDSDFFSNYFGVRPLSQRPEQMMAALYLQVSIISQALIFVTRSRSWSYAECP 783
Query: 789 GLLLATAFVIAQLV 802
GLLL AFVIAQLV
Sbjct: 784 GLLLLGAFVIAQLV 797
|
|
| TAIR|locus:2044450 HA1 "H(+)-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3305 (1168.5 bits), Expect = 0., P = 0.
Identities = 640/794 (80%), Positives = 689/794 (86%)
Query: 9 LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXG 68
LE+IKNE+VDLE+IPIEEVF+QLKC+REGLT+ EG R+ +FGPN G
Sbjct: 4 LEDIKNETVDLEKIPIEEVFQQLKCTREGLTTQEGEDRIVIFGPNKLEEKKESKILKFLG 63
Query: 69 FMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXXX 128
FMWNPLSWVME NG R PDWQDFVGII LLVINSTISFIEE
Sbjct: 64 FMWNPLSWVMEAAALMAIALANGDNRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAA 123
Query: 129 XXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTG 188
PKTKVLRDG+WSEQ+A+ILVPGD++SIKLGDI+PADARLLEGDPLK+DQSALTG
Sbjct: 124 LMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTG 183
Query: 189 ESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248
ESLPVTK+P EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT+I
Sbjct: 184 ESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTSI 243
Query: 249 GNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 308
GNFCICSIA+GI EI++MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 244 GNFCICSIAIGIAIEIVVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 303
Query: 309 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAA 368
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NL+EVF KGVEK+ V+L AA
Sbjct: 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAA 363
Query: 369 RASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASK 428
ASR ENQDAIDAA+VGMLADPKEARAG+REVHFLPFNPVDKRTALTYIDSDGNWHR SK
Sbjct: 364 MASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRVSK 423
Query: 429 GAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLL 488
GAPEQIL L N R D+RKKV + IDK+AERGLRSL VARQ +PEKTKESPG PW+ VGLL
Sbjct: 424 GAPEQILDLANARPDLRKKVLSCIDKYAERGLRSLAVARQVVPEKTKESPGGPWEFVGLL 483
Query: 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKD 548
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS++LLG DKD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSAALLGTDKD 543
Query: 549 ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXXX 608
++IA++PV+ELIEKADGFAGVFPEHKYEIVK+LQERKHI GMTGDGVNDAPALKK
Sbjct: 544 SNIASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGI 603
Query: 609 XXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI 668
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFMLI
Sbjct: 604 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLI 663
Query: 669 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIM 728
ALIW+FDFS FMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATG+VLG Y AIM
Sbjct: 664 ALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGIVLGGYQAIM 723
Query: 729 TVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERP 788
+V+FFW KTDFFSD FGVRS+R DE+M A+YLQVSIISQALIFVTRSRSWSF+ERP
Sbjct: 724 SVIFFWAAHKTDFFSDKFGVRSIRDNNDELMGAVYLQVSIISQALIFVTRSRSWSFVERP 783
Query: 789 GLLLATAFVIAQLV 802
G LL AFVIAQLV
Sbjct: 784 GALLMIAFVIAQLV 797
|
|
| TAIR|locus:2165600 HA3 "H(+)-ATPase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3262 (1153.3 bits), Expect = 0., P = 0.
Identities = 630/797 (79%), Positives = 684/797 (85%)
Query: 6 AISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXX 65
A LE+I NE+VDLE+IPIEEVF+QLKCSREGL+ EG +RL +FGPN
Sbjct: 2 ASGLEDIVNENVDLEKIPIEEVFQQLKCSREGLSGAEGENRLQIFGPNKLEEKKESKLLK 61
Query: 66 XXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXX 125
GFMWNPLSWVME NGGG+ PDWQDFVGI+ LLVINSTISF+EE
Sbjct: 62 FLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVCLLVINSTISFVEENNAGNA 121
Query: 126 XXXXXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSA 185
PKTKVLRDG+WSEQ+ASILVPGD++SIKLGDI+PADARLLEGDPLK+DQSA
Sbjct: 122 AAALMAGLAPKTKVLRDGKWSEQEASILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSA 181
Query: 186 LTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 245
LTGESLP TK P +EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL
Sbjct: 182 LTGESLPATKGPGEEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 241
Query: 246 TAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 305
TAIGNFCICSIAVGI EI++MYP+Q R YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG
Sbjct: 242 TAIGNFCICSIAVGIAIEIVVMYPIQRRHYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 301
Query: 306 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVIL 365
SH+LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NLIEV+ KGVEK+ V+L
Sbjct: 302 SHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVYCKGVEKDEVLL 361
Query: 366 LAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHR 425
AARASR ENQDAIDAA+VGMLADPKEARAG+RE+HFLPFNPVDKRTALT+IDS+GNWHR
Sbjct: 362 FAARASRVENQDAIDAAMVGMLADPKEARAGIREIHFLPFNPVDKRTALTFIDSNGNWHR 421
Query: 426 ASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLV 485
SKGAPEQIL LCN R D+RK+VH+ IDK+AERGLRSL V+RQ +PEKTKES G+PW+ V
Sbjct: 422 VSKGAPEQILDLCNARADLRKRVHSTIDKYAERGLRSLAVSRQTVPEKTKESSGSPWEFV 481
Query: 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQ 545
G+LPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAI KETGRRLGMG+NMYPSSSLLG+
Sbjct: 482 GVLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLGK 541
Query: 546 DKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXX 605
KD ++A +PV++LIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPALKK
Sbjct: 542 HKDEAMAHIPVEDLIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKAD 601
Query: 606 XXXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGF 665
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GF
Sbjct: 602 IGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGF 661
Query: 666 MLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYL 725
MLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLG Y+
Sbjct: 662 MLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYM 721
Query: 726 AIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFI 785
AIMTVVFFW KTDFF F VR LR EMM+ALYLQVSI+SQALIFVTRSRSWSF
Sbjct: 722 AIMTVVFFWAAYKTDFFPRTFHVRDLRGSEHEMMSALYLQVSIVSQALIFVTRSRSWSFT 781
Query: 786 ERPGLLLATAFVIAQLV 802
ERPG L AF +AQL+
Sbjct: 782 ERPGYFLLIAFWVAQLI 798
|
|
| TAIR|locus:2096549 HA8 "H(+)-ATPase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3240 (1145.6 bits), Expect = 0., P = 0.
Identities = 624/795 (78%), Positives = 683/795 (85%)
Query: 8 SLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXX 67
S +EIK E+VDLERIP+EEVFEQLKCS+EGL+SDEGA RL +FG N
Sbjct: 6 SWDEIKKENVDLERIPVEEVFEQLKCSKEGLSSDEGAKRLEIFGANKLEEKSENKFLKFL 65
Query: 68 GFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXX 127
GFMWNPLSWVME NGGG+ PDWQDF+GI+VLL+INSTISFIEE
Sbjct: 66 GFMWNPLSWVMESAAIMAIVLANGGGKAPDWQDFIGIMVLLIINSTISFIEENNAGNAAA 125
Query: 128 XXXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALT 187
PKTKVLRDG+W EQ+ASILVPGD+ISIKLGDIVPADARLLEGDPLKIDQSALT
Sbjct: 126 ALMANLAPKTKVLRDGKWGEQEASILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALT 185
Query: 188 GESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 247
GESLP TK+P DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKVLT+
Sbjct: 186 GESLPTTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTS 245
Query: 248 IGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 307
IGNFCICSI +G++ EI+IMYP+QHR YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH
Sbjct: 246 IGNFCICSIGLGMLIEILIMYPIQHRTYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 305
Query: 308 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLA 367
RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD++LIEVF K ++ + V+L+A
Sbjct: 306 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPKNMDSDSVVLMA 365
Query: 368 ARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRAS 427
ARASR ENQDAIDA+IVGML DPKEARAG+ EVHFLPFNPVDKRTA+TYID G+WHR+S
Sbjct: 366 ARASRIENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDESGDWHRSS 425
Query: 428 KGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487
KGAPEQI+ LCN + + ++K H VID FAERGLRSLGVA+Q +PEKTKES G+PW+ VGL
Sbjct: 426 KGAPEQIIELCNLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKESDGSPWEFVGL 485
Query: 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDK 547
LPLFDPPRHDSAETIRRAL LGVNVKMITGDQLAIG ETGRRLGMGTNMYPS+SLLG K
Sbjct: 486 LPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNMYPSTSLLGNSK 545
Query: 548 DASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXX 607
D S+ +P+DELIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPALKK
Sbjct: 546 DESLVGIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG 605
Query: 608 XXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 667
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML
Sbjct: 606 IAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 665
Query: 668 IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAI 727
+ALIW+FDF+PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFATGVVLG+Y+A+
Sbjct: 666 VALIWRFDFAPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLNEIFATGVVLGTYMAL 725
Query: 728 MTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIER 787
TV+FFWL TDFFS FGVRS++ +E+MAALYLQVSIISQALIFVTRSRSWSF+ER
Sbjct: 726 TTVLFFWLAHDTDFFSKTFGVRSIQGNEEELMAALYLQVSIISQALIFVTRSRSWSFVER 785
Query: 788 PGLLLATAFVIAQLV 802
PG LL AFVIAQLV
Sbjct: 786 PGFLLLIAFVIAQLV 800
|
|
| TAIR|locus:2025727 HA9 "H(+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3230 (1142.1 bits), Expect = 0., P = 0.
Identities = 618/802 (77%), Positives = 681/802 (84%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXX 60
M G+K S ++IKNE +DLE+IPIEEV QL+C+REGLTSDEG RL +FGPN
Sbjct: 1 MAGNKDSSWDDIKNEGIDLEKIPIEEVLTQLRCTREGLTSDEGQTRLEIFGPNKLEEKKE 60
Query: 61 XXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEX 120
GFMWNPLSWVME NGGGR PDWQDFVGI VLL+INSTISFIEE
Sbjct: 61 NKVLKFLGFMWNPLSWVMELAAIMAIALANGGGRPPDWQDFVGITVLLIINSTISFIEEN 120
Query: 121 XXXXXXXXXXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
PKTKVLRDG+WSEQ+A+ILVPGD+ISIKLGDIVPAD RLL+GDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIVPADGRLLDGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTK+P EV+SGSTCKQGE+EAVVIATGVHTFFGKAAHLVDSTNQ GH
Sbjct: 181 IDQSALTGESLPVTKHPGQEVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNQEGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIA+G++ EI++MYP+Q R YRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAIGMLIEIVVMYPIQKRAYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD++++EVF K ++K
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMVEVFVKDLDK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
+ +++ AARASR ENQDAIDA IVGML DP+EAR G+ EVHF PFNPVDKRTA+TYID++
Sbjct: 361 DQLLVNAARASRVENQDAIDACIVGMLGDPREAREGITEVHFFPFNPVDKRTAITYIDAN 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHR SKGAPEQI+ LCN RED K+ H +IDKFA+RGLRSL V RQ + EK K SPG
Sbjct: 421 GNWHRVSKGAPEQIIELCNLREDASKRAHDIIDKFADRGLRSLAVGRQTVSEKDKNSPGE 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ +GLLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 481 PWQFLGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQDKD SIA+LPVDELIEKADGFAGVFPEHKYEIVKRLQE KHICGMTGDGVNDAPA
Sbjct: 541 ALLGQDKDESIASLPVDELIEKADGFAGVFPEHKYEIVKRLQEMKHICGMTGDGVNDAPA 600
Query: 601 LKKXXXXXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LK+ VLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
IV+GFML+ALIWKFDFSPFMVLI+AILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVV
Sbjct: 661 IVMGFMLLALIWKFDFSPFMVLIVAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVV 720
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSR 780
LG+YLA+MTVVFFW TDFFS FGVRS+ P E+ AA+YLQVSI+SQALIFVTRSR
Sbjct: 721 LGTYLAVMTVVFFWAAESTDFFSAKFGVRSISGNPHELTAAVYLQVSIVSQALIFVTRSR 780
Query: 781 SWSFIERPGLLLATAFVIAQLV 802
SWS++ERPG L +AF +AQL+
Sbjct: 781 SWSYVERPGFWLISAFFMAQLI 802
|
|
| TAIR|locus:2053343 HA6 "H(+)-ATPase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3219 (1138.2 bits), Expect = 0., P = 0.
Identities = 622/796 (78%), Positives = 685/796 (86%)
Query: 7 ISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXX 66
IS +EIK E+VDLE+IP++EVF+QLKCSREGL+S+EG +RL +FG N
Sbjct: 5 ISWDEIKKENVDLEKIPVDEVFQQLKCSREGLSSEEGRNRLQIFGANKLEEKVENKFLKF 64
Query: 67 XGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXX 126
GFMWNPLSWVME NGGGR PDWQDFVGI LL+INSTISFIEE
Sbjct: 65 LGFMWNPLSWVMEAAAIMAIVLANGGGRPPDWQDFVGITCLLIINSTISFIEENNAGNAA 124
Query: 127 XXXXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSAL 186
PKTKVLRDGRW EQ+A+ILVPGD+ISIKLGDIVPADARLLEGDPLKIDQSAL
Sbjct: 125 AALMANLAPKTKVLRDGRWGEQEAAILVPGDLISIKLGDIVPADARLLEGDPLKIDQSAL 184
Query: 187 TGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT 246
TGESLP TK+ DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKVLT
Sbjct: 185 TGESLPATKHQGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLT 244
Query: 247 AIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 306
AIGNFCICSI +G++ EIIIMYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS
Sbjct: 245 AIGNFCICSIGIGMLIEIIIMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 304
Query: 307 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILL 366
HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD+NLIEVF+K V+K++VILL
Sbjct: 305 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFSKDVDKDYVILL 364
Query: 367 AARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRA 426
+ARASR ENQDAID +IV ML DPKEARAG+ EVHFLPFNPV+KRTA+TYID++G WHR
Sbjct: 365 SARASRVENQDAIDTSIVNMLGDPKEARAGITEVHFLPFNPVEKRTAITYIDTNGEWHRC 424
Query: 427 SKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVG 486
SKGAPEQI+ LC+ + + +++ H +IDKFAERGLRSLGVARQ +PEK KES G PW+ VG
Sbjct: 425 SKGAPEQIIELCDLKGETKRRAHEIIDKFAERGLRSLGVARQRVPEKDKESAGTPWEFVG 484
Query: 487 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQD 546
LLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL ++
Sbjct: 485 LLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL-EN 543
Query: 547 KDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXX 606
KD + +PVDELIEKADGFAGVFPEHKYEIV++LQERKHI GMTGDGVNDAPALKK
Sbjct: 544 KDDTTGGVPVDELIEKADGFAGVFPEHKYEIVRKLQERKHIVGMTGDGVNDAPALKKADI 603
Query: 607 XXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 666
VLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM
Sbjct: 604 GIAVDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 663
Query: 667 LIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLA 726
L+ALIW+FDFSPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLG+Y+A
Sbjct: 664 LVALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPIPDSWKLKEIFATGVVLGTYMA 723
Query: 727 IMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE 786
++TVVFFWL T FFSD FGVRSL+ + +E++A LYLQVSIISQALIFVTRSRSWSF+E
Sbjct: 724 LVTVVFFWLAHDTTFFSDKFGVRSLQGKDEELIAVLYLQVSIISQALIFVTRSRSWSFVE 783
Query: 787 RPGLLLATAFVIAQLV 802
RPGLLL AF +AQL+
Sbjct: 784 RPGLLLLIAFFVAQLI 799
|
|
| TAIR|locus:2172244 HA11 "H(+)-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3193 (1129.1 bits), Expect = 0., P = 0.
Identities = 625/804 (77%), Positives = 677/804 (84%)
Query: 3 GDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXX 62
GDK LE + E+VDLE +PIEEVFE L+CSREGLT++ RL +FG N
Sbjct: 2 GDKEEVLEAVLKETVDLENVPIEEVFESLRCSREGLTTEAADERLALFGHNKLEEKKESK 61
Query: 63 XXXXXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXX 122
GFMWNPLSWVME NGGG+ PDWQDFVGII LLVINSTISFIEE
Sbjct: 62 FLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNA 121
Query: 123 XXXXXXXXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKID 182
PK KVLRDGRW EQDA+ILVPGD+ISIKLGDIVPADARLLEGDPLKID
Sbjct: 122 GNAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKID 181
Query: 183 QSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQ 242
QS+LTGESLPVTK P D V+SGSTCKQGE+EAVVIATGVHTFFGKAAHLVD+TN VGHFQ
Sbjct: 182 QSSLTGESLPVTKGPGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTNHVGHFQ 241
Query: 243 KVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTM 302
+VLTAIGNFCICSIAVG++ EI++MYP+QHR YR GIDNLLVLLIGGIPIAMPTVLSVTM
Sbjct: 242 QVLTAIGNFCICSIAVGMIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTM 301
Query: 303 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEH 362
AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD+NLIEVF KGV+ +
Sbjct: 302 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADT 361
Query: 363 VILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGN 422
V+L+AA+ASR ENQDAIDAAIVGMLADPKEARAGVREVHFLPFNP DKRTALTYIDSDG
Sbjct: 362 VVLMAAQASRLENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPTDKRTALTYIDSDGK 421
Query: 423 WHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPW 482
HR SKGAPEQIL L + R ++ ++VHAVIDKFAERGLRSL VA QE+PE TKES G PW
Sbjct: 422 MHRVSKGAPEQILNLAHNRAEIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGPW 481
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 542
Q +GL+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+L
Sbjct: 482 QFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSAL 541
Query: 543 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 602
LGQ KD SI ALP+D+LIEKADGFAGVFPEHKYEIVKRLQ RKHICGMTGDGVNDAPALK
Sbjct: 542 LGQHKDESIGALPIDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALK 601
Query: 603 KXXXXXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 662
K VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 602 KADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 661
Query: 663 LGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLG 722
LGFML+ALIWKFDF PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFATGVV G
Sbjct: 662 LGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVFG 721
Query: 723 SYLAIMTVVFFWLMRKTDFFSDAFGVRSL-RTRPDE---MMAALYLQVSIISQALIFVTR 778
SY+A+MTV+FFW KTDFF FGV +L +T D+ + +A+YLQVSIISQALIFVTR
Sbjct: 722 SYMAMMTVIFFWAAYKTDFFPRTFGVSTLEKTAHDDFRKLASAIYLQVSIISQALIFVTR 781
Query: 779 SRSWSFIERPGLLLATAFVIAQLV 802
SRSWS++ERPG+LL AF++AQLV
Sbjct: 782 SRSWSYVERPGMLLVVAFILAQLV 805
|
|
| TAIR|locus:2097895 HA4 "H(+)-ATPase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3155 (1115.7 bits), Expect = 0., P = 0.
Identities = 616/798 (77%), Positives = 675/798 (84%)
Query: 9 LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXG 68
LE + E+VDLE +PIEEVFE L+CS+EGLT+ RL +FG N G
Sbjct: 12 LEAVLKEAVDLENVPIEEVFENLRCSKEGLTTQAADERLALFGHNKLEEKKESKFLKFLG 71
Query: 69 FMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXXX 128
FMWNPLSWVME NGGG+ PDWQDFVGII LLVINSTISFIEE
Sbjct: 72 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAA 131
Query: 129 XXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTG 188
PK KVLRDGRW EQDA+ILVPGD+ISIKLGDIVPADARLLEGDPLKIDQSALTG
Sbjct: 132 LMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTG 191
Query: 189 ESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248
ESLPVTK+ D V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQ+GHFQ+VLTAI
Sbjct: 192 ESLPVTKSSGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQIGHFQQVLTAI 251
Query: 249 GNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 308
GNFCICSIAVG++ EI++MYP+QHR YR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 252 GNFCICSIAVGMLIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 311
Query: 309 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAA 368
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD+NLIEVF KGV+ + V+L+AA
Sbjct: 312 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFMKGVDADTVVLMAA 371
Query: 369 RASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASK 428
RASR ENQDAIDAAIVGMLADPK+ARAG++EVHFLPFNP DKRTALTYID++GN HR SK
Sbjct: 372 RASRLENQDAIDAAIVGMLADPKDARAGIQEVHFLPFNPTDKRTALTYIDNEGNTHRVSK 431
Query: 429 GAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLL 488
GAPEQIL L + + ++ ++VHAVIDKFAERGLRSL VA Q++PE K+S G PWQ VGL+
Sbjct: 432 GAPEQILNLAHNKSEIERRVHAVIDKFAERGLRSLAVAYQDVPEGRKDSAGGPWQFVGLM 491
Query: 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKD 548
PLFDPPRHDSAETIRRALNLGV+VKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQ+KD
Sbjct: 492 PLFDPPRHDSAETIRRALNLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKD 551
Query: 549 ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXXX 608
SI ALPVDELIEKADGFAGVFPEHKYEIVKRLQ RKHICGMTGDGVNDAPALKK
Sbjct: 552 ESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 611
Query: 609 XXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI 668
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML+
Sbjct: 612 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLL 671
Query: 669 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIM 728
ALIW+FDF PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFATGVV GSY+A+M
Sbjct: 672 ALIWQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVFGSYMAMM 731
Query: 729 TVVFFWLMRKTDFFSDAFGVRSL-RTRPDE---MMAALYLQVSIISQALIFVTRSRSWSF 784
TV+FFW+ KTDFF FGV +L +T D+ + +A+YLQVSIISQALIFVTRSRSWSF
Sbjct: 732 TVIFFWVSYKTDFFPRTFGVATLEKTAHDDFRKLASAIYLQVSIISQALIFVTRSRSWSF 791
Query: 785 IERPGLLLATAFVIAQLV 802
+ERPG+ L AF++AQLV
Sbjct: 792 VERPGIFLMIAFILAQLV 809
|
|
| TAIR|locus:2081932 HA7 "H(+)-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2876 (1017.5 bits), Expect = 1.3e-299, P = 1.3e-299
Identities = 562/808 (69%), Positives = 647/808 (80%)
Query: 8 SLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXX 67
+L+ I ES+DLE +P+EEVF+ LKC++EGLTS+E RL +FG N
Sbjct: 6 ALKAITTESIDLENVPVEEVFQHLKCTKEGLTSNEVQERLTLFGYNKLEEKKESKILKFL 65
Query: 68 GFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXX 127
GFMWNPLSWVME +GGG+ D+ DFVGI+VLL+INSTISF+EE
Sbjct: 66 GFMWNPLSWVMEAAALMAIGLAHGGGKPADYHDFVGIVVLLLINSTISFVEENNAGNAAA 125
Query: 128 XXXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALT 187
PK K +RDG+W+E DA+ LVPGD++SIKLGDI+PADARLLEGDPLKIDQ+ LT
Sbjct: 126 ALMAQLAPKAKAVRDGKWNEIDAAELVPGDIVSIKLGDIIPADARLLEGDPLKIDQATLT 185
Query: 188 GESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 247
GESLPVTKNP V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST VGHFQKVLTA
Sbjct: 186 GESLPVTKNPGASVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTTHVGHFQKVLTA 245
Query: 248 IGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 307
IGNFCICSIAVG+ EI+++Y +Q R YR GIDNLLVLLIGGIPIAMPTVLSVTMAIG+H
Sbjct: 246 IGNFCICSIAVGMAIEIVVIYGLQKRGYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGAH 305
Query: 308 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLA 367
RL+QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NLIEVF +G++++ +L+A
Sbjct: 306 RLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFKRGIDRDMAVLMA 365
Query: 368 ARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRAS 427
ARA+R ENQDAID AIV ML+DPKEARAG++E+HFLPF+P ++RTALTY+D +G HR S
Sbjct: 366 ARAARLENQDAIDTAIVSMLSDPKEARAGIKELHFLPFSPANRRTALTYLDGEGKMHRVS 425
Query: 428 KGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487
KGAPE+IL + + + ++++KVHA IDKFAERGLRSLG+A QE+P+ + G PW V L
Sbjct: 426 KGAPEEILDMAHNKLEIKEKVHATIDKFAERGLRSLGLAYQEVPDGDVKGEGGPWDFVAL 485
Query: 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDK 547
LPLFDPPRHDSA+TI RAL+LGV+VKMITGDQLAI KETGRRLGMGTNMYPSSSLL +
Sbjct: 486 LPLFDPPRHDSAQTIERALHLGVSVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLSDNN 545
Query: 548 DASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXX 607
++ VDELIE ADGFAGVFPEHKYEIVKRLQ RKHICGMTGDGVNDAPALKK
Sbjct: 546 TEGVS---VDELIENADGFAGVFPEHKYEIVKRLQSRKHICGMTGDGVNDAPALKKADIG 602
Query: 608 XXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 667
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV+GFML
Sbjct: 603 IAVDDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVMGFML 662
Query: 668 IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAI 727
+ + W+FDF PFMVL+IAILNDGTIMTISKDRVKPSP PD WKLKEIFATGVVLG+YLAI
Sbjct: 663 LCVFWEFDFPPFMVLVIAILNDGTIMTISKDRVKPSPTPDCWKLKEIFATGVVLGAYLAI 722
Query: 728 MTVVFFWLMRKTDFFSDAFGVRSLRTRP-------------DEMMAALYLQVSIISQALI 774
MTVVFFW +T+FF + F VR+ ++M +A+YLQVS ISQALI
Sbjct: 723 MTVVFFWAAYETNFFHNIFHVRNFNQHHFKMKDKKVAAHLNEQMASAVYLQVSTISQALI 782
Query: 775 FVTRSRSWSFIERPGLLLATAFVIAQLV 802
FVTRSRSWSF+ERPG LL AF+IAQLV
Sbjct: 783 FVTRSRSWSFVERPGFLLVIAFLIAQLV 810
|
|
| TAIR|locus:2020372 AHA10 "autoinhibited H(+)-ATPase isoform 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2866 (1013.9 bits), Expect = 1.5e-298, P = 1.5e-298
Identities = 555/792 (70%), Positives = 636/792 (80%)
Query: 10 EEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXGF 69
+ + +DL +P+EEVFE L+ S +GL S + RL +FGPN GF
Sbjct: 13 DTFNRKGIDLGILPLEEVFEYLRTSPQGLLSGDAEERLKIFGPNRLEEKQENRFVKFLGF 72
Query: 70 MWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXXXX 129
MWNPLSWVME N PDW+DF GI+ LL+IN+TISF EE
Sbjct: 73 MWNPLSWVMEAAALMAIALANSQSLGPDWEDFTGIVCLLLINATISFFEENNAGNAAAAL 132
Query: 130 XXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 189
KT+VLRDG+W EQDASILVPGD+ISIKLGDI+PADARLLEGDPLKIDQS LTGE
Sbjct: 133 MARLALKTRVLRDGQWQEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSVLTGE 192
Query: 190 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 249
SLPVTK ++VFSGSTCKQGEIEAVVIATG TFFGK A LVDST+ GHFQ+VLT+IG
Sbjct: 193 SLPVTKKKGEQVFSGSTCKQGEIEAVVIATGSTTFFGKTARLVDSTDVTGHFQQVLTSIG 252
Query: 250 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 309
NFCICSIAVG+V EIIIM+PVQHR YR GI+NLLVLLIGGIPIAMPTVLSVT+AIGSHRL
Sbjct: 253 NFCICSIAVGMVLEIIIMFPVQHRSYRIGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRL 312
Query: 310 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 369
SQQGAITKRMTAIEEMAGMDVLC DKTGTLTLN LTVD+NLIEVF ++K+ ++LLA R
Sbjct: 313 SQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNSLTVDKNLIEVFVDYMDKDTILLLAGR 372
Query: 370 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 429
ASR ENQDAIDAAIV MLADP+EARA +RE+HFLPFNPVDKRTA+TYIDSDG W+RA+KG
Sbjct: 373 ASRLENQDAIDAAIVSMLADPREARANIREIHFLPFNPVDKRTAITYIDSDGKWYRATKG 432
Query: 430 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 489
APEQ+L LC + ++ ++V+A+ID+FAE+GLRSL VA QEIPEK+ SPG PW+ GLLP
Sbjct: 433 APEQVLNLCQQKNEIAQRVYAIIDRFAEKGLRSLAVAYQEIPEKSNNSPGGPWRFCGLLP 492
Query: 490 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 549
LFDPPRHDS ETI RAL+LGV VKMITGDQLAI KETGRRLGMGTNMYPSSSLLG + D
Sbjct: 493 LFDPPRHDSGETILRALSLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGHNNDE 552
Query: 550 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXXXX 609
A+PVDELIE ADGFAGVFPEHKYEIVK LQE KH+ GMTGDGVNDAPALKK
Sbjct: 553 H-EAIPVDELIEMADGFAGVFPEHKYEIVKILQEMKHVVGMTGDGVNDAPALKKADIGIA 611
Query: 610 XXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 669
VLT+PGLSVIISAVLTSRAIFQRM+NYT+YAVSITIRIVLGF L+A
Sbjct: 612 VADATDAARSSADIVLTDPGLSVIISAVLTSRAIFQRMRNYTVYAVSITIRIVLGFTLLA 671
Query: 670 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMT 729
LIW++DF PFMVLIIAILNDGTIMTISKDRV+PSP P+SWKL +IFATG+V+G+YLA++T
Sbjct: 672 LIWEYDFPPFMVLIIAILNDGTIMTISKDRVRPSPTPESWKLNQIFATGIVIGTYLALVT 731
Query: 730 VVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPG 789
V+F+W++ T FF F V+S+ +++ +A+YLQVSIISQALIFVTRSR WSF ERPG
Sbjct: 732 VLFYWIIVSTTFFEKHFHVKSIANNSEQVSSAMYLQVSIISQALIFVTRSRGWSFFERPG 791
Query: 790 LLLATAFVIAQL 801
LL AF++AQL
Sbjct: 792 TLLIFAFILAQL 803
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P19456 | PMA2_ARATH | 3, ., 6, ., 3, ., 6 | 0.8729 | 0.9386 | 0.8386 | no | no |
| P49380 | PMA1_KLULA | 3, ., 6, ., 3, ., 6 | 0.3790 | 0.9338 | 0.8798 | yes | no |
| Q9LV11 | PMA11_ARATH | 3, ., 6, ., 3, ., 6 | 0.8243 | 0.9681 | 0.8577 | no | no |
| Q03194 | PMA4_NICPL | 3, ., 6, ., 3, ., 6 | 0.8834 | 0.9421 | 0.8382 | N/A | no |
| Q58623 | Y1226_METJA | 3, ., 6, ., 3, ., - | 0.4295 | 0.8488 | 0.8931 | yes | no |
| P24545 | PMA1_ZYGRO | 3, ., 6, ., 3, ., 6 | 0.3840 | 0.8713 | 0.8021 | yes | no |
| Q43128 | PMA10_ARATH | 3, ., 6, ., 3, ., 6 | 0.7626 | 0.9338 | 0.8352 | no | no |
| Q08435 | PMA1_NICPL | 3, ., 6, ., 3, ., 6 | 0.8175 | 0.9704 | 0.8589 | N/A | no |
| Q08436 | PMA3_NICPL | 3, ., 6, ., 3, ., 6 | 0.8158 | 0.9681 | 0.8577 | N/A | no |
| P83970 | PMA1_WHEAT | 3, ., 6, ., 3, ., 6 | 0.8753 | 0.9409 | 0.8380 | N/A | no |
| Q42556 | PMA9_ARATH | 3, ., 6, ., 3, ., 6 | 0.8403 | 0.9468 | 0.8406 | no | no |
| Q9SH76 | PMA6_ARATH | 3, ., 6, ., 3, ., 6 | 0.8492 | 0.9386 | 0.8377 | no | no |
| Q9SJB3 | PMA5_ARATH | 3, ., 6, ., 3, ., 6 | 0.8727 | 0.9374 | 0.8366 | yes | no |
| P09627 | PMA1_SCHPO | 3, ., 6, ., 3, ., 6 | 0.3735 | 0.8937 | 0.8237 | yes | no |
| P22180 | PMA1_SOLLC | 3, ., 6, ., 3, ., 6 | 0.8168 | 0.9669 | 0.8566 | N/A | no |
| Q9LY32 | PMA7_ARATH | 3, ., 6, ., 3, ., 6 | 0.7623 | 0.9350 | 0.8241 | no | no |
| Q9M2A0 | PMA8_ARATH | 3, ., 6, ., 3, ., 6 | 0.8528 | 0.9386 | 0.8386 | no | no |
| Q9SU58 | PMA4_ARATH | 3, ., 6, ., 3, ., 6 | 0.8193 | 0.9610 | 0.8479 | no | no |
| P54679 | PMA1_DICDI | 3, ., 6, ., 3, ., 6 | 0.5069 | 0.8878 | 0.7107 | yes | no |
| Q7XPY2 | PMA1_ORYSJ | 3, ., 6, ., 3, ., 6 | 0.8952 | 0.9409 | 0.8380 | yes | no |
| P20431 | PMA3_ARATH | 3, ., 6, ., 3, ., 6 | 0.8607 | 0.9409 | 0.8398 | no | no |
| P20649 | PMA1_ARATH | 3, ., 6, ., 3, ., 6 | 0.8753 | 0.9374 | 0.8366 | no | no |
| P23980 | PMA2_SOLLC | 3, ., 6, ., 3, ., 6 | 0.8086 | 0.6717 | 0.8082 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_fgenesh4_pg.C_1470038 | autoinhibited H+ ATPase (955 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| grail3.0023015401 | SubName- Full=Putative uncharacterized protein; (216 aa) | • | 0.899 | ||||||||
| fgenesh4_pm.C_LG_II000842 | inorganic pyrophosphatase (EC-3.6.1.1) (215 aa) | • | 0.899 | ||||||||
| fgenesh4_pg.C_LG_VII001101 | SubName- Full=Putative uncharacterized protein; (213 aa) | • | 0.899 | ||||||||
| eugene3.00090843 | inorganic pyrophosphatase (EC-3.6.1.1) (298 aa) | • | 0.899 | ||||||||
| estExt_fgenesh4_pm.C_LG_XIV0223 | SubName- Full=Putative uncharacterized protein; (216 aa) | • | 0.899 | ||||||||
| estExt_fgenesh4_pg.C_LG_XIII0040 | vacuolar H+-translocating inorganic pyrophosphatase (EC-3.6.1.1) (757 aa) | • | 0.899 | ||||||||
| estExt_fgenesh4_pg.C_1520062 | SubName- Full=Putative uncharacterized protein; (768 aa) | • | 0.899 | ||||||||
| estExt_fgenesh4_pg.C_1330100 | vacuolar H+-translocating inorganic pyrophosphatase (EC-3.6.1.1) (757 aa) | • | 0.899 | ||||||||
| estExt_Genewise1_v1.C_LG_X3050 | vacuolar H+-translocating inorganic pyrophosphatase (636 aa) | • | 0.899 | ||||||||
| estExt_Genewise1_v1.C_LG_I4261 | SubName- Full=Putative uncharacterized protein; (296 aa) | • | 0.899 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 847 | |||
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-178 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-113 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 4e-92 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 7e-89 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 3e-79 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 4e-78 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 3e-68 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 1e-63 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 3e-61 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 4e-60 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 1e-57 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 5e-54 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 1e-52 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 1e-40 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 2e-37 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 7e-35 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 4e-33 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 7e-33 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 2e-31 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 6e-29 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 1e-27 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 1e-26 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 2e-26 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 9e-19 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 1e-17 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 1e-13 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 3e-08 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 2e-07 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 2e-07 | |
| PRK01158 | 230 | PRK01158, PRK01158, phosphoglycolate phosphatase; | 5e-04 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 0.001 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 0.003 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 0.004 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 0.004 | |
| TIGR00099 | 256 | TIGR00099, Cof-subfamily, Cof subfamily of IIB sub | 0.004 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 1179 bits (3052), Expect = 0.0
Identities = 446/768 (58%), Positives = 552/768 (71%), Gaps = 23/768 (2%)
Query: 37 GLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDP 96
GLTS E RL +GPN+L EKK S +LKFLGF WNPLSWVMEAAAI+AIAL N
Sbjct: 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALEN------ 54
Query: 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPG 156
W DFV I+ LL++N+TI FIEEN AGNA AL +LAPK +VLRDG+W E AS LVPG
Sbjct: 55 -WVDFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPG 113
Query: 157 DVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVV 216
DV+ +K+GDIVPAD RL EGD +++DQ+ALTGESLPVTK D +SGST KQGE EAVV
Sbjct: 114 DVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVV 173
Query: 217 IATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKY 275
ATG++TFFGKAA LV ST GH QK+L+ IG F I I V ++ E+++++ + +
Sbjct: 174 TATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233
Query: 276 RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 335
R+G+ LVLL+GGIPIAMP VLSVTMA+G+ L+++ AI R+TAIEE+AGMD+LCSDK
Sbjct: 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDK 293
Query: 336 TGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARA 395
TGTLTLNKL++D L F G +K+ V+L AA ASR E+QDAID A++G D KEAR
Sbjct: 294 TGTLTLNKLSIDEILP--FFNGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARD 351
Query: 396 GVREVHFLPFNPVDKRTALTYIDSD-GNWHRASKGAPEQILALCNCREDVRKKVHAVIDK 454
G + + F+PF+PVDKRT T D + G + +KGAP+ IL LC+ ++++ +KV +D+
Sbjct: 352 GYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDE 411
Query: 455 FAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKM 514
A RG R+LGVAR W +GLLPLFDPPRHD+ ETI RA +LGV VKM
Sbjct: 412 LASRGYRALGVART--------DEEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463
Query: 515 ITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574
+TGD LAI KET RRLG+GTN+Y + LL D + + E++E ADGFA VFPEHK
Sbjct: 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLP-SGLGEMVEDADGFAEVFPEHK 522
Query: 575 YEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII 634
YEIV+ LQ+R H+ GMTGDGVNDAPALKKAD+GIAVA ATDAARSA+DIVLTEPGLSVI+
Sbjct: 523 YEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIV 582
Query: 635 SAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMT 694
A+L SR IFQRMK+Y IY ++ TIRIV F L+ LI F F P MV+IIAILNDGTIMT
Sbjct: 583 DAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNFYFPPIMVVIIAILNDGTIMT 642
Query: 695 ISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTR 754
I+ D VKPS P W L+E+F VLG YL I T + + T FF D FG++ L
Sbjct: 643 IAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTTFFIDKFGLQLL--- 699
Query: 755 PDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLV 802
+ + +YLQVSI A IFVTR+ + + ERPG LL AFVIAQ++
Sbjct: 700 HGNLQSFIYLQVSISGHATIFVTRTHGFFWSERPGKLLFGAFVIAQII 747
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 536 bits (1384), Expect = e-178
Identities = 254/858 (29%), Positives = 401/858 (46%), Gaps = 96/858 (11%)
Query: 20 ERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKL-EEKKESKVLKFLGFMWNPLSWV 77
+ E+ +L S GL+ +E RL +GPN+L EEKK S + KFL +P +
Sbjct: 26 LSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIIL 85
Query: 78 MEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKT 137
+ AA+++ + G D + I++++VIN+ + F++E A A AL +PK
Sbjct: 86 LLVAALLSAFV---GDWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKA 142
Query: 138 KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNP 197
KVLRDG++ E AS LVPGD++ ++ GD+VPAD RLLE L++D+SALTGESLPV K
Sbjct: 143 KVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGESLPVEKQA 202
Query: 198 YDE--------------VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQV-GHFQ 242
+FSG+T G + +V+ATG T FGK A L+ + +V Q
Sbjct: 203 LPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQ 262
Query: 243 KVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNL------LVLLIGGIPIAMPT 296
+ L +G F + ++A ++ +R G L L L + +P +P
Sbjct: 263 RKLNKLGKF------LLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPA 316
Query: 297 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV---------- 346
V+++ +A+G+ R+++ AI + + AIE + +DV+CSDKTGTLT NK+TV
Sbjct: 317 VVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGK 376
Query: 347 DRNLIEVFAKGVEKEHVILLAARASRTENQ-------DAIDAAIV------GMLADPKEA 393
D + ++ ++ A S T + D + A+V G D
Sbjct: 377 DIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFSLDLSGL 436
Query: 394 RAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALC-------NCREDVRK 446
+ +PF+ KR ++ +G + KGAPE IL C E+ +
Sbjct: 437 EVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLR 496
Query: 447 KVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQ----LVGLLPLFDPPRHDSAETI 502
+ + + A GLR L VA +++ K+ + +GL + DPPR D E I
Sbjct: 497 TLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAI 556
Query: 503 RRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDEL--- 559
G+ V MITGD + + G+ + + G + + AL +EL
Sbjct: 557 EELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAE----LDALSDEELAEL 612
Query: 560 IEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD-ATDAAR 618
+E+ FA V PE K IV+ LQ+ H+ MTGDGVNDAPALK AD+GIA+ TDAA+
Sbjct: 613 VEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAK 672
Query: 619 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSP 678
A+DIVL + + I+ AV+ R ++ +K + +Y +S + VL +LI ++ F P
Sbjct: 673 EAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVL-TLLIYSLFNLFFLP 731
Query: 679 F---MVLIIAILNDGTI---MTISK------DRVKPSPQPDSWKLKEIFATGVVLGSYLA 726
+L I +L D + + R P+ + K + +++G A
Sbjct: 732 LTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSA 791
Query: 727 IMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE 786
I+ ++ F L L + + + +I L RSR F+
Sbjct: 792 ILFILTFLLYL----LGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLS 847
Query: 787 R-----PGLLLATAFVIA 799
L LA +I
Sbjct: 848 SLLFSNKYLWLALLVIII 865
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 355 bits (912), Expect = e-113
Identities = 186/588 (31%), Positives = 285/588 (48%), Gaps = 78/588 (13%)
Query: 104 IIVLLVINSTISFIEENNAGNAAAALMANLAPKTK--VLRDGRWSEQDASILVPGDVISI 161
I+ L+++ + ++ A + +L L VLR+G W E A LVPGDV+ +
Sbjct: 2 ILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNG-WKEIPAKDLVPGDVVLV 60
Query: 162 KLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY----------DEVFSGSTCKQGE 211
K G+ VPAD LL G +D+S LTGES PV K D VF+G+ G
Sbjct: 61 KSGETVPADGVLLSGS-CFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTYVFGGT 119
Query: 212 IEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPV 270
+ VV TG+ T G+ A +V + Q + NF I + + ++A + +Y
Sbjct: 120 LIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENF-IFILFLLLLALAVFLYLF 178
Query: 271 QH----RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 326
+ L++L+ +P A+P ++V +A+G RL+++G + + + A+EE+
Sbjct: 179 IRGWDPNSIFKALLRALIVLVIVVPPALPAAVTVALAVGDARLAKKGILVRNLNALEELG 238
Query: 327 GMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGM 386
+D LCSDKTGTLT NK+T+ I G E L+A + + D ++ A++
Sbjct: 239 KVDYLCSDKTGTLTKNKMTLQGVYI---DGGKEDNSSSLVACDNNYL-SGDPMEKALLKS 294
Query: 387 LADPKEARAGVRE---VHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCRED 443
+A G +E + PF+ V KR ++ DG+ KGAPE IL CN
Sbjct: 295 AELVGKADKGNKEYKILDVFPFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERCN---- 350
Query: 444 VRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIR 503
+ A +GLR L A +E+ + + +GL+ DP R D+ ETI
Sbjct: 351 ---NYEEKYLELARQGLRVLAFASKELED--------DLEFLGLITFEDPLRPDAKETIE 399
Query: 504 RALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563
G+ V MITGD + K + LG+
Sbjct: 400 ELKAAGIKVVMITGDNVLTAKAIAKELGI------------------------------- 428
Query: 564 DGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI 623
D FA V PE K +IV+ LQ++ HI MTGDGVNDAPALKKAD+GIA+ A++A+DI
Sbjct: 429 DVFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAM-----GAKAAADI 483
Query: 624 VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALI 671
VL + LS I+ AV R IF +K+ +A++ + ++ +L+ +I
Sbjct: 484 VLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIVI 531
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 309 bits (793), Expect = 4e-92
Identities = 225/800 (28%), Positives = 376/800 (47%), Gaps = 105/800 (13%)
Query: 16 SVDLERIPIEEVFEQLKCSRE-GLTS-DEGAHRLHVFGPNKLE-EKKESKVLKFLG-FMW 71
S + +EE +L+ + GL S E +HR G N+ + E+ ES KFL F+
Sbjct: 1 SKQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVK 60
Query: 72 NPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMA 131
NPL ++ A+A++++ + N D V I + ++I T+ F++E + + AL
Sbjct: 61 NPLILLLIASAVISVFMGN-------IDDAVSITLAILIVVTVGFVQEYRSEKSLEALNK 113
Query: 132 NLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESL 191
+ P+ ++R+G+ AS LVPGD++ + +GD VPAD R++E L ID+S LTGE+
Sbjct: 114 LVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETT 173
Query: 192 PVTK-------NPYDEV-------FSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ 237
PV+K ++ F G+ + G + +V+ TG +T FG ++ + +
Sbjct: 174 PVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEK 233
Query: 238 VGH-FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPT 296
QK + +G + ++ G++ I ++ Q + + + + L + IP +P
Sbjct: 234 PKTPLQKSMDLLGK-QLSLVSFGVIGVICLVGWFQGKDWLEMFTISVSLAVAAIPEGLPI 292
Query: 297 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV------DRNL 350
+++VT+A+G R+S++ AI +++ ++E + ++V+CSDKTGTLT N +TV D
Sbjct: 293 IVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLH 352
Query: 351 IEVFAKGVEK-EHVILLAARASRTENQD--------------------------AIDAAI 383
+ A + + VI+ D A+
Sbjct: 353 TMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVAL 412
Query: 384 VGMLA-----DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRAS-KGAPEQILAL 437
+ +L D +E V EV PF+ K A+ + KGA EQ+L
Sbjct: 413 IELLMKFGLDDLRETYIRVAEV---PFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKY 469
Query: 438 CN-----------CREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVG 486
C + R + + A GLR + A PEK + + +G
Sbjct: 470 CTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASG--PEKGQLT------FLG 521
Query: 487 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQD 546
L+ + DPPR E + + GV + MITGD RRLGM S S+ G+
Sbjct: 522 LVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMP--SKTSQSVSGEK 579
Query: 547 KDA-SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKAD 605
DA L +++ K FA PEHK +IVK LQ+R + MTGDGVNDAPALK AD
Sbjct: 580 LDAMDDQQL--SQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLAD 637
Query: 606 IGIAVAD-ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLG 664
IG+A+ TD A+ A+D++LT+ + I+SA+ + IF +KN+ + +S ++ L
Sbjct: 638 IGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSV-AALS 696
Query: 665 FMLIALIWKFD--FSPFMVLIIAILNDGT------IMTISKDRVKPSPQP--DSWKLKEI 714
+ +A + F + +L I IL DG + + KD ++ P+P D K++
Sbjct: 697 LIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDL 756
Query: 715 FATGVVLGSYLAIMTVVFFW 734
+V + + T+ F
Sbjct: 757 IKKILVSAIIIVVGTLFVFV 776
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 300 bits (769), Expect = 7e-89
Identities = 234/843 (27%), Positives = 398/843 (47%), Gaps = 98/843 (11%)
Query: 23 PIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKL-EEKKESKVLKFLGFMWNPLSWVMEAA 81
E + +L GLT+ E RL FGPN+ EEKK + + NP +++ A
Sbjct: 19 GKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYIL--A 76
Query: 82 AIMAIALANGGGRDPDWQDFVGIIVLLVINSTI-SFIEENNAGNAAAALMANLAPKTKVL 140
+M ++ D + II L+V+ S + FI+E+ A AA AL + VL
Sbjct: 77 MLMGVSYLT------DDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVL 130
Query: 141 R------DGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVT 194
R +G E LVPGD+I + GDI+PADAR++ L I+QSALTGESLPV
Sbjct: 131 RVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSALTGESLPVE 190
Query: 195 K----------NPYDE---VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 241
K + F G+ G +AVV+ATG T+FG A F
Sbjct: 191 KFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRGQTAF 250
Query: 242 QKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVT 301
K + ++ I + V +V ++++ + + + L + +G P +P ++S
Sbjct: 251 DKGVKSVSKLLIRFMLV-MVPVVLMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSN 309
Query: 302 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKE 361
+A G+ +S++ I K ++AI+ MD+LC+DKTGTLT +K+ +++++ + G E
Sbjct: 310 LAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHID---SSGETSE 366
Query: 362 HVILLA--ARASRTENQDAIDAAIVGMLAD--PKEARAGVREVHFLPFNPVDKRTALTYI 417
V+ +A +T ++ +D A++ L + ++ + ++V +PF+ +R ++ +
Sbjct: 367 RVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVV-V 425
Query: 418 DSDGNWHR-ASKGAPEQILALCN----------CREDVRKKVHAVIDKFAERGLRSLGVA 466
++ R KGA E++L +C E + ++ + + +G+R + VA
Sbjct: 426 ENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVA 485
Query: 467 RQEIP------EKTKESPGAPWQLV--GLLPLFDPPRHDSAETIRRALNLGVNVKMITGD 518
+ + KT E QL+ G L DPP+ + E I G+NVK++TGD
Sbjct: 486 TKTLKVGEADFTKTDEE-----QLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGD 540
Query: 519 QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDEL---IEKADGFAGVFPEHKY 575
+ + +G+ N + LLG D I L +EL + K FA + P K
Sbjct: 541 NEIVTARICQEVGIDANDF----LLGAD----IEELSDEELARELRKYHIFARLTPMQKS 592
Query: 576 EIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIIS 635
I+ L++ H G GDG+NDAPAL+KAD+GI+V A D A+ ASDI+L E L V+
Sbjct: 593 RIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEASDIILLEKSLMVLEE 652
Query: 636 AVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFM------VLIIAILND 689
V+ R F + Y S V ++ + F PF+ +LI +L D
Sbjct: 653 GVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASA-----FIPFLPMLSLHLLIQNLLYD 707
Query: 690 GTIMTISKDRVKPS--PQPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFG 747
+ +T+ D++ +P W+ K + + +G +I + F LM +F F
Sbjct: 708 FSQLTLPWDKMDREFLKKPHQWEQKGMGRFMLCIGPVSSIFDIATFLLM----WF--VFS 761
Query: 748 VRSLRTRPDEMMAALYLQVSIISQALIF-VTRSRSWSFIERPG---LLLATAFVIAQLVR 803
++ + + + + V ++SQ L+ + R+ FI+ +++AT V+A +
Sbjct: 762 ANTVEEQ--ALFQSGWFVVGLLSQTLVVHMIRTEKIPFIQSRAAAPVMIATLLVMALGII 819
Query: 804 VHF 806
+ F
Sbjct: 820 IPF 822
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 274 bits (702), Expect = 3e-79
Identities = 209/703 (29%), Positives = 322/703 (45%), Gaps = 118/703 (16%)
Query: 23 PIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKL-EEKKESKVLKFLGFMWNPLSWV-MEA 80
+EE L R+GLT ++ A RL +GPN++ EK +++ L NP +V M
Sbjct: 31 SLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVL 90
Query: 81 AAI---MAIALANGGGRDPDWQDFVGIIVLLV---INSTISFIEENNAGNAAAALMANLA 134
AAI L G + D G+I++L ++ + F +E + AA AL A +
Sbjct: 91 AAISFFTDYWLPLRRGEETDL---TGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVR 147
Query: 135 PKTKVLR------DGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTG 188
VLR + E LVPGD++ + GD++PAD RL+E L I Q+ LTG
Sbjct: 148 TTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTG 207
Query: 189 ESLPVTKNPYDEV-------------------------FSGSTCKQGEIEAVVIATGVHT 223
E+LPV K YD + F G+ G AVV+ATG T
Sbjct: 208 EALPVEK--YDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRT 265
Query: 224 FFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLL 283
+FG A + T F + + S++ ++ +++M PV
Sbjct: 266 YFGSLAKSIVGTRAQTAFDR--------GVNSVSWLLIRFMLVMVPV------------- 304
Query: 284 VLLIGGI--------------------PIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIE 323
VLLI G P +P ++S +A G+ ++++ + KR+ AI+
Sbjct: 305 VLLINGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQ 364
Query: 324 EMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTEN--QDAIDA 381
MDVLC+DKTGTLT +++ ++ +L G + E V+ LA S ++ ++ +D
Sbjct: 365 NFGAMDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMDQ 421
Query: 382 AIV--GMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCN 439
A+V AG R+V LPF+ V +R ++ D+ G KGA E++LA+
Sbjct: 422 AVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVAT 481
Query: 440 CRED----------VRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESP---GAPWQLV- 485
D R+++ A+ + + G R L VA +EIP + LV
Sbjct: 482 HVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVI 541
Query: 486 -GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG 544
G L DPP+ +A I GV VK++TGD + + R +G+ P LLG
Sbjct: 542 RGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLE----PGEPLLG 597
Query: 545 QDKDASIAALPVDEL---IEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPAL 601
+ I A+ L +E+ FA + P K ++K LQ H G GDG+NDAPAL
Sbjct: 598 TE----IEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPAL 653
Query: 602 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIF 644
+ AD+GI+V D A+ ++DI+L E L V+ V+ R F
Sbjct: 654 RDADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETF 696
|
Length = 903 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 271 bits (694), Expect = 4e-78
Identities = 203/699 (29%), Positives = 326/699 (46%), Gaps = 108/699 (15%)
Query: 17 VDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMW----N 72
+ +P EE+++ EGL E G N+L +K L W N
Sbjct: 47 LKAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHL---WVCYRN 103
Query: 73 PLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINST-ISFIEENNAGNAAAALMA 131
P + ++ ++ A + G+I L+V ST ++FI+E + AA AL A
Sbjct: 104 PFNILLTILGAISYATEDLFA--------AGVIALMVAISTLLNFIQEARSTKAADALKA 155
Query: 132 NLAPKTKVLR------DGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSA 185
++ VLR + W E LVPGD+I + GD++PAD R+L+ L + Q++
Sbjct: 156 MVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQAS 215
Query: 186 LTGESLPVTK----------NPYDE---VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 232
LTGESLPV K NP + F G+ G +AVVIATG +T+FG+ A V
Sbjct: 216 LTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRV 275
Query: 233 DST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGG-- 289
++ FQ+ I ++ ++ +++M PV VLLI G
Sbjct: 276 SEQDSEPNAFQQ--------GISRVSWLLIRFMLVMAPV-------------VLLINGYT 314
Query: 290 ------------------IPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVL 331
P +P +++ T+A G+ +LS+Q I KR+ AI+ MD+L
Sbjct: 315 KGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDIL 374
Query: 332 CSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARAS--RTENQDAIDAAIVGMLAD 389
C+DKTGTLT +K+ ++ + ++ G E V+ A S +T ++ +D A++ + +
Sbjct: 375 CTDKTGTLTQDKIVLENH-TDIS--GKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDE 431
Query: 390 PKEARAGV--REVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCN-------- 439
+++ +PF+ +R ++ ++ + KGA E+IL +C+
Sbjct: 432 ESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEI 491
Query: 440 --CREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQ---LVGLLPLFDPP 494
+ + +++ V D +GLR + VA + +P + + A L G + DPP
Sbjct: 492 VPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPP 551
Query: 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAAL 554
+ +A ++ GV VK++TGD + + +G+ L+G D I L
Sbjct: 552 KETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAGEV----LIGSD----IETL 603
Query: 555 PVDEL---IEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA 611
DEL E+ FA + P HK IV L+ H+ G GDG+NDAPAL+ ADIGI+V
Sbjct: 604 SDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD 663
Query: 612 DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNY 650
A D AR A+DI+L E L V+ V+ R F M Y
Sbjct: 664 GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKY 702
|
Length = 902 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 244 bits (624), Expect = 3e-68
Identities = 184/717 (25%), Positives = 316/717 (44%), Gaps = 87/717 (12%)
Query: 25 EEVFEQLKCS-REGL--TSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVM--- 78
E + +LK EG+ +S R V+G N+L EK FL +W LS
Sbjct: 46 EGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPP---KSFLQIVWAALSDQTLIL 102
Query: 79 -EAAAIMAIALA------NGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALM- 130
AA++++ L + W + V I+V +++ ++ + + L
Sbjct: 103 LSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNR 162
Query: 131 ANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGES 190
A K V+R G+ + +V GD++S+ GD+VPAD + G L+ID+S++TGES
Sbjct: 163 EKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGES 222
Query: 191 LPVTKNPYDEVF--SGSTCKQGEIEAVVIATGVHTFFGKAAHLV-----DSTNQVGHFQK 243
P+ K P + F SG+ +G +V A GV++F GK + DST +
Sbjct: 223 DPIKKGPVQDPFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRQAGEDSTPLQEKLSE 282
Query: 244 VLTAIGNF-CICSIAVGIVA---EIIIMYPVQHRKYRDGIDNLLVLLIGGIPI---AMPT 296
+ IG F ++ + +V + + R + L I + I A+P
Sbjct: 283 LAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPE 342
Query: 297 V--LSVTMAI--GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIE 352
L+VT+A+ ++ + + + + A E M +CSDKTGTLT N ++V + I
Sbjct: 343 GLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIG 402
Query: 353 VFAKGVEK------EHV--ILLAARA-------------------SRTENQDAIDAAIVG 385
V +HV IL+ + S+TE A+ +
Sbjct: 403 EQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTEC--ALLDFGLL 460
Query: 386 MLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALC----NC- 440
+L D +E RA + V PFN K ++ S G + KGA E +L C +
Sbjct: 461 LLRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSN 520
Query: 441 ------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT---KESPGAPWQLVGLLPLF 491
+D + + VI+ A LR++ +A ++ + K+ P L+G++ +
Sbjct: 521 GEATPISDDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNKGLTLIGVVGIK 580
Query: 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASI 551
DP R E ++ G+ V+M+TGD + K R G+ T + + S+
Sbjct: 581 DPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILT---FGGLAMEGKEFRSL 637
Query: 552 AALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA 611
+D ++ K A P K +V L++ + +TGDG NDAPALK AD+G ++
Sbjct: 638 VYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMG 697
Query: 612 DA-TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNY-----TIYAVSITIRIV 662
+ T+ A+ ASDI+L + + I+ AV R ++ ++ + T+ V++ + V
Sbjct: 698 ISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFV 754
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 227 bits (581), Expect = 1e-63
Identities = 161/610 (26%), Positives = 244/610 (40%), Gaps = 104/610 (17%)
Query: 81 AAIMAIALANGGGRDPDWQDFVGIIVLLVINSTIS-FIEE---NNAGNAAAALMANLAPK 136
A I A A + P + + +++ L + ++E A A AL+ LAPK
Sbjct: 156 ATIGAYAYSLYATLFPVYFEEAAMLIFLF---LLGRYLEARAKGRARRAIRALLD-LAPK 211
Query: 137 T--KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVT 194
T V DG E + GD++ ++ G+ +P D ++ G +D+S LTGESLPV
Sbjct: 212 TATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSSS-VDESMLTGESLPVE 270
Query: 195 KNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV-DSTNQVGHFQKVLTAI-GNFC 252
K P DEVF+G+ G + V G T + LV ++ + Q++ + F
Sbjct: 271 KKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFV 330
Query: 253 ICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI--GSHRLS 310
+ + + + + + L +L+ P A+ L+ AI G R +
Sbjct: 331 PVVLVIAALT-FALWPLFGGGDWETALYRALAVLVIACPCAL--GLATPTAILVGIGRAA 387
Query: 311 QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARA 370
++G + K A+E +A +D + DKTGTLT K V +V A +++ ++ LAA
Sbjct: 388 RRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEV----TDVVALDGDEDELLALAAAL 443
Query: 371 SRTENQ------DAI-DAAIVGMLADPKEARA----GVREVHFLPFNPVDKRTALTYIDS 419
E AI AA L D ++ GV VD L
Sbjct: 444 ---EQHSEHPLAKAIVKAAAERGLPDVEDFEEIPGRGVEAE-------VDGERVL----- 488
Query: 420 DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPG 479
G L D+ + I+ G + VA
Sbjct: 489 --------VGNAR---LLGEEGIDL-PLLSERIEALESEGKTVVFVAVDG---------- 526
Query: 480 APWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS 539
+LVG++ L D R D+ E I LG+ V M+TGD + + LG
Sbjct: 527 ---KLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELG-------- 575
Query: 540 SSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAP 599
+DE+ A + PE K EIV+ LQ M GDG+NDAP
Sbjct: 576 ----------------IDEV------RAELLPEDKAEIVRELQAEGRKVAMVGDGINDAP 613
Query: 600 ALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK-NYTIYAVSIT 658
AL AD+GIA+ TD A A+D+VL LS + A+ SRA + +K N
Sbjct: 614 ALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNA 673
Query: 659 IRIVLGFMLI 668
I I L +
Sbjct: 674 IAIPLAAGGL 683
|
Length = 713 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 216 bits (553), Expect = 3e-61
Identities = 142/581 (24%), Positives = 237/581 (40%), Gaps = 82/581 (14%)
Query: 106 VLLVINSTISFIEENNAGNAAAAL--MANLAPKT--KVLRDGRWSEQDASILVPGDVISI 161
+LL + +EE G A+ AL + LAP T + DG E L GD++ +
Sbjct: 23 LLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIV 82
Query: 162 KLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGV 221
+ G+ +P D ++ G+ +D+SALTGES+PV K DEVF+G+ G + V G
Sbjct: 83 RPGERIPVDGVVISGESE-VDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGE 141
Query: 222 HTFFGKAAHLV-DSTNQVGHFQKVLTAI-GNFCICSIAVGIVAEIIIMYPVQHRKYRDGI 279
+ + LV ++ + Q++ I + +A+ ++ ++ + +
Sbjct: 142 DSTLAQIVELVEEAQSSKAPIQRLADRIASYYVPAVLAIALLT-FVVWLAL---GALGAL 197
Query: 280 DNLLVLLIGGIPIAMPTVLSVTMAI--GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTG 337
L +L+ P A+ L+ +AI +++G + K A+E++A + + DKTG
Sbjct: 198 YRALAVLVVACPCAL--GLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTG 255
Query: 338 TLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGV 397
TLT K TV IE E +L A A + + AIV
Sbjct: 256 TLTTGKPTVVD--IEPLDDASISEEELLALAAALEQSSSHPLARAIV----------RYA 303
Query: 398 REVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILA----LCNCREDVRKKVHAVID 453
++ D + + G A+ E++ + +++
Sbjct: 304 KKRGLELPKQED----VEEVPGKG--VEATVDGGEEVRIGNPRFLELAIEPISASPDLLN 357
Query: 454 KFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV-NV 512
+ +G + VA +L+G++ L D R ++ E I G +
Sbjct: 358 EGESQGKTVVFVAVDG-------------ELLGVIALRDQLRPEAKEAIAALKRAGGIKL 404
Query: 513 KMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572
M+TGD + + LG +DE+ A + PE
Sbjct: 405 VMLTGDNRSAAEAVAAELG------------------------IDEV------HAELLPE 434
Query: 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV 632
K IVK LQE + M GDG+NDAPAL AD+GIA+ +D A A+DIVL LS
Sbjct: 435 DKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLSS 494
Query: 633 IISAVLTSRAIFQRMK-NYTIYAVSITIRIVLGFMLIALIW 672
+ +A+ SR + +K N + I L + +W
Sbjct: 495 LPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGLLPLW 535
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 220 bits (563), Expect = 4e-60
Identities = 190/796 (23%), Positives = 340/796 (42%), Gaps = 150/796 (18%)
Query: 9 LEEIKNE-SVDLERIPIEEVFEQLKCSRE-GLTSDEGAHRLHVFGPNKLEEKKES-KVLK 65
L+E+K E +D ++ ++E+ + GL++ A L GPN L + + +K
Sbjct: 6 LDELKKEVEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVK 65
Query: 66 FLGFMWNPLSWVMEAAAIMA-IALANGGGRDPDWQD---FVGII--VLLVINSTISFIEE 119
F ++ S ++ AI+ +A + + Q+ ++G++ +++I S+ +E
Sbjct: 66 FCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQE 125
Query: 120 NNAGNAAAALMANLAPKTK-VLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDP 178
+ + N+ P+ V+RDG +A +V GD++ +K GD +PAD R++
Sbjct: 126 AKSSKIMESF-KNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG 184
Query: 179 LKIDQSALTGESLPVTK-------NPYDE---VFSGSTCKQGEIEAVVIATGVHTFFGKA 228
K+D S+LTGES P T+ NP + F + C +G +V+ TG T G+
Sbjct: 185 CKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRI 244
Query: 229 AHLVDSTN--------QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGID 280
A L ++ HF ++T + F S + +I+ Y + + +
Sbjct: 245 ASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSF---FILSLILGY-----TWLEAVI 296
Query: 281 NLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 340
L+ +++ +P + ++V + + + R++++ + K + A+E + +CSDKTGTLT
Sbjct: 297 FLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLT 356
Query: 341 LNKLTV-----DRNLIE----------VFAKGVEK----EHVILLAARASRTENQDAI-- 379
N++TV D + E F K + L RA Q+ +
Sbjct: 357 QNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPI 416
Query: 380 -------DAAIVGML-------ADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHR 425
DA+ +L E R +V +PFN +K + + D R
Sbjct: 417 LKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPR 476
Query: 426 ---ASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPE 472
KGAPE+IL C+ E++++ + G R LG +P+
Sbjct: 477 HLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPD 536
Query: 473 K---------TKES--PGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLA 521
+ T + P VGL+ + DPPR + + + + G+ V M+TGD
Sbjct: 537 EQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPI 596
Query: 522 IGKETGRRLGMGTNMYPSSSLLGQDKDASIAA---LPVDELIEKADG------------- 565
K + +G+ + G + IAA +PV ++ +
Sbjct: 597 TAKAIAKGVGIISE--------GNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMT 648
Query: 566 ---------------FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610
FA P+ K IV+ Q + I +TGDGVND+PALKKADIG+A+
Sbjct: 649 SEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM 708
Query: 611 ADA-TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 669
A +D ++ A+D++L + + I++ V R IF +K Y ++ I
Sbjct: 709 GIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIP--------- 759
Query: 670 LIWKFDFSPFMVLIIA 685
+ +PF++ IIA
Sbjct: 760 -----EITPFLIFIIA 770
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 196 bits (500), Expect = 1e-57
Identities = 76/223 (34%), Positives = 129/223 (57%), Gaps = 4/223 (1%)
Query: 104 IIVLLVINSTISFIEENNAGNAAAALMANLAPK-TKVLRDGRWSEQDASILVPGDVISIK 162
I++L++IN+ + +E A A AL L P V+RDG+ E A LV GD++ +K
Sbjct: 2 ILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLK 61
Query: 163 LGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVH 222
GD VPAD R++EG L++D+SALTGESLPV K+ D VF+G+ GE++ +V ATG
Sbjct: 62 PGDRVPADGRIIEGS-LEVDESALTGESLPVEKSRGDTVFAGTVVLSGELKVIVTATGED 120
Query: 223 TFFGKAAHLVDSTNQV-GHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDN 281
T GK A LV+ Q++L + + I + + + +++ + + + +
Sbjct: 121 TELGKIARLVEEAKSAKTPLQRLLDKLAKI-LVPIVLALAILVFLIWFFRGGDFLEALLR 179
Query: 282 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 324
L +L+ P A+P + + +A+G+ RL+++G + K ++A+E
Sbjct: 180 ALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 197 bits (502), Expect = 5e-54
Identities = 147/587 (25%), Positives = 242/587 (41%), Gaps = 93/587 (15%)
Query: 101 FVGIIVLLVINSTISFIEENNAGNAAAAL--MANLAPKT--KVLRDGRWSEQDASILVPG 156
F +L+ ++E G A+ AL +A L P T + DG E +L PG
Sbjct: 54 FDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTDDGEIEEVPVELLQPG 113
Query: 157 DVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVV 216
D++ + G+ +P D ++EG+ ++D+S +TGESLPV K D V +G+ G +
Sbjct: 114 DIVRVLPGEKIPVDGTVIEGES-EVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRA 172
Query: 217 IATGVHTFFGKAAHLVD----STNQVGHFQKVLTAIGNFCICSIAV-GIVAEIIIMYPVQ 271
ATG T + LV S + + + +IA+ V +I+
Sbjct: 173 TATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWLILGADFV 232
Query: 272 HRKYRDGIDNLLVLLIG---GIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 328
+ VL+I + +A PTV+ A+ + ++ G + K A+E A +
Sbjct: 233 FALEV----AVTVLIIACPCALGLATPTVI----AVATGLAAKNGVLIKDGDALERAANI 284
Query: 329 DVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLA 388
D + DKTGTLT K TV + VF + E + L AA + +E+ + AIV
Sbjct: 285 DTVVFDKTGTLTQGKPTV--TDVHVFGESDRDELLALAAALEAGSEH--PLAKAIV---- 336
Query: 389 DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKV 448
+ + D + + I +G + L N + +
Sbjct: 337 ------SYAKAKGITLSQVSDFKA-IPGIGVEGTVE-------GHTIQLGNEKLLGENGL 382
Query: 449 HAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNL 508
+ G S+ VA +L G+L L D + ++ E I+
Sbjct: 383 KTDGEVEEGGGTTSVLVAVNG-------------ELAGVLALADQLKPEAKEVIQALKRR 429
Query: 509 GVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568
G+ M+TGD K + LG IE + A
Sbjct: 430 GIEPVMLTGDNRKTAKAVAKELG----------------------------IE--NVRAE 459
Query: 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP 628
V P+ K ++K+LQE+ + M GDG+NDAPAL +AD+GIA+ TD A A+D+VL
Sbjct: 460 VLPDDKAALIKKLQEKGKVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLLRN 519
Query: 629 GLSVIISAVLTSRAIFQRMKN-------YTIYAVSITIRIVLGFMLI 668
L+ + +A+ SR +R+K Y + A+ I ++ ++
Sbjct: 520 DLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGVLYPAGIL 566
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 192 bits (490), Expect = 1e-52
Identities = 167/624 (26%), Positives = 255/624 (40%), Gaps = 111/624 (17%)
Query: 78 MEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKT 137
M AA+ A+A+ ++ + +++L I T+ A A ALM LAP T
Sbjct: 5 MALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALME-LAPDT 56
Query: 138 -KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKN 196
+VLR G E L GDV+ +K G+ VP D +L G +D+SALTGES+PV K
Sbjct: 57 ARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSGTST-VDESALTGESVPVEKA 115
Query: 197 PYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV-DSTNQVGHFQKVLTAIGNFCICS 255
P DEVF+G+ G + VV + K +LV ++ ++ Q+ + +
Sbjct: 116 PGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPV 175
Query: 256 IAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI--GSHRLSQQG 313
+ +A ++ ++ ++ + LVLL+ P A+ V+S A ++ G
Sbjct: 176 VLAIALAIWLVPGLLK--RWPFWVYRALVLLVVASPCAL--VISAPAAYLSAISAAARHG 231
Query: 314 AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDR-NLIEVF--AKGVEK--EHVILLAA 368
+ K A+E +A + + DKTGTLT + V EV A E+ H + A
Sbjct: 232 ILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPAEVLRLAAAAEQASSHPLARAI 291
Query: 369 RASRTENQDAID-AAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRAS 427
+ ++ + G GVR V VD I + + A
Sbjct: 292 VDYARKRENVESVEEVPGE---------GVRAV-------VDGGEV--RIGNPRSLEAAV 333
Query: 428 KGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487
PE VH D +G
Sbjct: 334 GARPESAGKTI---------VHVARDG----------------------------TYLGY 356
Query: 488 LPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQD 546
+ L D PR D+AE I LG+ V M+TGD+ A+ + R LG
Sbjct: 357 ILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELG--------------- 401
Query: 547 KDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI 606
+DE+ A + PE K EIVK L+E+ M GDG+NDAPAL AD+
Sbjct: 402 ---------IDEV------HAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADV 446
Query: 607 GIAV-ADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK-NYTIYAVSITIRIVLG 664
GIA+ A +D A +D+VL LS + A+ +R + +K N I I + I+L
Sbjct: 447 GIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLA 506
Query: 665 FMLIALIWKFDFSPFMVLIIAILN 688
+ +W ++ ILN
Sbjct: 507 LFGVLPLWLAVLGHEGSTVLVILN 530
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 161 bits (408), Expect = 1e-40
Identities = 104/345 (30%), Positives = 157/345 (45%), Gaps = 54/345 (15%)
Query: 427 SKGAPEQILALCN-----------CREDVRKKVHAVIDKFAER-GLRSLGVARQEIPEKT 474
KGAPE +L C + ++ + +VI + LR L +A ++IP+
Sbjct: 449 VKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPR 508
Query: 475 KESPGAPWQ----------LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK 524
+E + +G++ + DPPR + A+ I + G+ V MITGD +
Sbjct: 509 EEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAE 568
Query: 525 ETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADG-----------FAGVFPEH 573
RR+G + D+D + + E E F+ V P H
Sbjct: 569 AICRRIG----------IFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSH 618
Query: 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 633
K E+V+ LQE+ I MTGDGVNDAPALKKADIGIA+ T+ A+ ASD+VL + + I
Sbjct: 619 KSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATI 678
Query: 634 ISAVLTSRAIFQRMKNYTIYAVSITI-RIVLGFMLIALIWKFDFSPFMVLIIAILNDGTI 692
++AV RAI+ MK + Y +S I +V F+ AL P +L + ++ DG
Sbjct: 679 VAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLP 738
Query: 693 MTI------SKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMTVV 731
T KD + P+ + E TG + YL + V
Sbjct: 739 ATALGFNPPDKDIMWKPPR----RPDEPLITGWLFFRYLVVGVYV 779
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 150 bits (382), Expect = 2e-37
Identities = 176/950 (18%), Positives = 308/950 (32%), Gaps = 264/950 (27%)
Query: 36 EGLTSDEGAHRLHVFGPNKLEEKKES--KVLK------FLGF------MWNPLSWVMEAA 81
GLT+ + A R +G N++E S ++LK F F +W + +
Sbjct: 138 NGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVILWLLDEYYYYSL 197
Query: 82 AIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR 141
I+ ++ I L V + + +++ V+R
Sbjct: 198 CIVFMS--------------STSISLSVYQIRKQMQRLRDMVHKPQSVI--------VIR 235
Query: 142 DGRWSEQDASILVPGDVISIKL--GDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYD 199
+G+W + LVPGD++SI +P D+ LL G + +++S LTGES+PV K P
Sbjct: 236 NGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGSCI-VNESMLTGESVPVLKFPIP 294
Query: 200 E------------------VFSG-------STCKQGEIEAVVIATGVHTFFGKAAHLVDS 234
+ +F G A+V+ TG T G+ LV S
Sbjct: 295 DNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQ---LVRS 351
Query: 235 ------TNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIG 288
+ + + I +I + + +L ++ I
Sbjct: 352 ILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIKDGRP--LGKIILRSLDIITI- 408
Query: 289 GIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL---- 344
+P A+P LS+ + RL ++G I +DV C DKTGTLT + L
Sbjct: 409 VVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRG 468
Query: 345 -------------------TVDRNLIEVFA-------------------KGVEKEHVILL 366
+ A K E L
Sbjct: 469 VQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLE 528
Query: 367 AARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTA-LTYIDSDGNWHR 425
S + + D + + F+ +R + + + + +
Sbjct: 529 EDDESAEPTS-----ILAVVRTDDPPQELSI--IRRFQFSSALQRMSVIVSTNDERSPDA 581
Query: 426 ASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT--------KES 477
KGAPE I +LC+ E V V+ + G R L +A +E+P+ T +++
Sbjct: 582 FVKGAPETIQSLCS-PETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDA 640
Query: 478 PGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY 537
+ +G + +P + D+ E I+ + MITGD R G+ +
Sbjct: 641 VESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGI---VN 697
Query: 538 PSSSLL-------GQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGM 590
PS++L+ K I +D + + +P + + L R H+ M
Sbjct: 698 PSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLA-M 756
Query: 591 TGD--------------------------------------------------GVNDAPA 600
+G G ND A
Sbjct: 757 SGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGA 816
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LK+AD+GI++++A A A+ +S + + + R A+ + +
Sbjct: 817 LKQADVGISLSEAE--ASVAAPFTSKLASISCVPNVIREGRC-----------ALVTSFQ 863
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVV 720
+ L +LI + S + LI + L DG +TI
Sbjct: 864 MFKYMALYSLIQFYSVS-ILYLIGSNLGDGQFLTID------------------------ 898
Query: 721 LGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQ-ALIFV--- 776
L ++ V + R + S + RP + ++Y+ S++ Q L +
Sbjct: 899 ----LLLIFPVALLMSR-----NKPLKKLS-KERPPSNLFSVYILTSVLIQFVLHILSQV 948
Query: 777 -----TRSRSWSFIERPGLLLATAFVIAQLVRVHFHLTNLNTTIHMGSSF 821
++ W E P L LNT + SSF
Sbjct: 949 YLVFELHAQPWYKPENPVDL-----------EKENFPNLLNTVLFFVSSF 987
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 142 bits (361), Expect = 7e-35
Identities = 96/303 (31%), Positives = 151/303 (49%), Gaps = 32/303 (10%)
Query: 80 AAAIMAIALANGGGRDPDWQDFVG---IIVLLVINSTISFIEENNAGNAAAALMANLAPK 136
AA ++ LA + FV I+++LV N+ + +E NA A AL +
Sbjct: 15 LAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEH 74
Query: 137 TKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKN 196
KVLRDGRWS A LVPGD++ + +GD VPAD R+L L++DQS LTGES+ V K+
Sbjct: 75 AKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKH 134
Query: 197 ----PYDE---------VFSGSTCKQGEIEAVVIATGVHTFFGK-AAHLVDSTNQVGHFQ 242
P + +FSG+ G+ VV+ TG+ T GK + + + Q
Sbjct: 135 TESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQ 194
Query: 243 KVLTAIGNFC------ICSIAVGIVAEIIIMYPV-QHRKYRDGIDNLLV---LLIGGIPI 292
K L G IC I V ++ P + I + L + IP
Sbjct: 195 KKLDEFGELLSKVIGLIC-ILVWVINIGHFNDPALGGGWIQGAIYYFKIAVALAVAAIPE 253
Query: 293 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIE 352
+P V++ +A+G+ +++++ AI +++ ++E + V+CSDKTGTLT N+++V +
Sbjct: 254 GLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSV----CK 309
Query: 353 VFA 355
V A
Sbjct: 310 VVA 312
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 137 bits (347), Expect = 4e-33
Identities = 102/371 (27%), Positives = 166/371 (44%), Gaps = 62/371 (16%)
Query: 36 EGLTSDEGAHRLHVFGPNKLEEKKESKVLK-FLGFMWNPLSWVMEAAAIMAIALANGGGR 94
EGLT DE HRL G N+LE L + N + V+ AA ++ A+
Sbjct: 25 EGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH----- 79
Query: 95 DPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILV 154
DW + I ++ +N I FI+E A +L +P V+R+G+ D+ LV
Sbjct: 80 --DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLV 137
Query: 155 PGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY------DEV------- 201
PGD+ +K GD +PAD RL+E D++ LTGESLPV K+ + ++
Sbjct: 138 PGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRIN 197
Query: 202 --FSGSTCKQGEIEAVVIATGVHTFFGKAA---------------------------HLV 232
FS S +G + + IAT +++ G A L
Sbjct: 198 LAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILK 257
Query: 233 DSTNQVGHF---------QKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLL 283
+ G F + L+ + C + I+ II+M + ++ +
Sbjct: 258 VTKKVTGAFLGLNVGTPLHRKLSKLAVILFC---IAIIFAIIVMAAHKFDVDKEVAIYAI 314
Query: 284 VLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNK 343
L I IP ++ VLS+TMA+G+ +S++ I +++ A+E + ++ +CSDKTGT+T K
Sbjct: 315 CLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGK 374
Query: 344 LTVDRNLIEVF 354
+ + I F
Sbjct: 375 MIARQIWIPRF 385
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 135 bits (342), Expect = 7e-33
Identities = 129/506 (25%), Positives = 212/506 (41%), Gaps = 84/506 (16%)
Query: 138 KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNP 197
+ DG A+ L GD++ ++ G+I+P+D ++EG +D+SA+TGES PV +
Sbjct: 108 LLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAITGESAPVIRES 166
Query: 198 ---YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCIC 254
+ V G+ ++ + A TF + LV+ + QK I I
Sbjct: 167 GGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAER----QKTPNEIALT-IL 221
Query: 255 SIAVGIVAEIII--MYPVQHRKYRDG----IDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 308
+ ++ + + +YP Y G + L+ LL+ IP + +LS G R
Sbjct: 222 LSGLTLIFLLAVATLYPFAI--YSGGGAASVTVLVALLVCLIPTTIGGLLSAIGIAGMDR 279
Query: 309 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLTVDRNLIEVFAKGVEKEHVILLA 367
++Q I A+E +D L DKTGT+TL N+ + I V GV +E + A
Sbjct: 280 VTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASE--FIPV--PGVSEEELADAA 335
Query: 368 ARASRTENQDAIDAAIVGMLADPKEARAGVREVH----FLPFNPVDKRTALTYIDSDGNW 423
AS ++ +IV LA ++ F+PF +T ++ +D G
Sbjct: 336 QLAS-LADETPEGRSIV-ELAKKLGIELREDDLQSHAEFVPFT---AQTRMSGVDLPGG- 389
Query: 424 HRASKGAPEQILALCNCRE-DVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPW 482
KGA + I R + + + A +D+ + G L V
Sbjct: 390 REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVENG------------- 436
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYP 538
+++G++ L D + E +G+ MITGD AI E G
Sbjct: 437 RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAG----------- 485
Query: 539 SSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDA 598
VD+ I +A PE K ++++ Q + MTGDG NDA
Sbjct: 486 -----------------VDDFIAEAT------PEDKLALIRQEQAEGRLVAMTGDGTNDA 522
Query: 599 PALKKADIGIAVADATDAARSASDIV 624
PAL +AD+G+A+ T AA+ A+++V
Sbjct: 523 PALAQADVGVAMNSGTQAAKEAANMV 548
|
Length = 681 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 132 bits (332), Expect = 2e-31
Identities = 113/444 (25%), Positives = 191/444 (43%), Gaps = 73/444 (16%)
Query: 351 IEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDK 410
I VFAK + H L N++ + + E PF+ K
Sbjct: 482 IHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAE---FPFDSEIK 538
Query: 411 RTALTYIDSDGNWHRA-SKGAPEQILALCNC----------------REDVRKKVHAVID 453
R A Y D+ G + +KGA E+I+ C+ RE + + ++
Sbjct: 539 RMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESL-- 596
Query: 454 KFAERGLRSLGVARQEI---------------PEKTKESPGAPWQLVGLLPLFDPPRHDS 498
A GLR L A + T ES + +GL+ ++DPPR++S
Sbjct: 597 --AAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESD---LEFLGLIGIYDPPRNES 651
Query: 499 AETIRRALNLGVNVKMITGDQLAIGKETGRRLG-MGTNMYPSSS-------LLGQDKDAS 550
A + + G+NV M+TGD K + +G + N + G DA
Sbjct: 652 AGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDA- 710
Query: 551 IAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610
++ VD+L A P+ K ++++ L RK C MTGDGVND+P+LK A++GIA+
Sbjct: 711 LSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAM 770
Query: 611 A-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 669
+ +D A+ ASDIVL++ + I++A+ R +F + + ++ ++ + + ++I
Sbjct: 771 GINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAI-LLIIG 829
Query: 670 LIWK-------FDFSPFMVL-IIAILNDGTIMTISKDRVKPS----PQPDS------WKL 711
L ++ F SP +L I I + M + ++ P D+ +L
Sbjct: 830 LAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKEL 889
Query: 712 -KEIFATGVVLG-SYLAIMTVVFF 733
++FA G LG S LA T + +
Sbjct: 890 IIDMFAYGFFLGGSCLASFTGILY 913
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 6e-29
Identities = 152/528 (28%), Positives = 227/528 (42%), Gaps = 91/528 (17%)
Query: 128 ALMANLAPKTKV-LRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSAL 186
ALMA L P+T LRDG E + L PGDVI + G +PAD +LL D+SAL
Sbjct: 236 ALMA-LVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFA-SFDESAL 293
Query: 187 TGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ--------V 238
TGES+PV + ++V +G+T + V++ + + HL++ + +
Sbjct: 294 TGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFI 353
Query: 239 GHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVL 298
F ++ T + ++ V +V ++ P Q YR L +LLI G P A+ V+
Sbjct: 354 DRFSRIYTPA--IMLVALLVILVPPLLFAAPWQEWIYR----GLTLLLI-GCPCAL--VI 404
Query: 299 SVTMAIGS--HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAK 356
S AI S +++GA+ K A+E++ + + DKTGTLT K V I
Sbjct: 405 STPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTD--IHPAT- 461
Query: 357 GVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTAL-- 414
G+ + ++ LAA A++ LA A VR L + + AL
Sbjct: 462 GISESELLALAA---------AVEQGSTHPLAQAIVREAQVRG---LAIPEAESQRALAG 509
Query: 415 TYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT 474
+ I+ N R AP K+ + D FA + + E KT
Sbjct: 510 SGIEGQVNGERVLICAPG--------------KLPPLADAFAGQ------INELESAGKT 549
Query: 475 KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534
++GL+ L D R D+ + I LG+ M+TGD
Sbjct: 550 VVLVLRNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDN--------------- 594
Query: 535 NMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDG 594
P ++ A+IA EL D AG+ PE K + V L + + M GDG
Sbjct: 595 ---PRAA-------AAIAG----EL--GIDFRAGLLPEDKVKAVTELNQHAPL-AMVGDG 637
Query: 595 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRA 642
+NDAPA+K A IGIA+ TD A +D LT L + + SRA
Sbjct: 638 INDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRA 685
|
Length = 741 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 119 bits (298), Expect = 1e-27
Identities = 129/602 (21%), Positives = 251/602 (41%), Gaps = 76/602 (12%)
Query: 72 NPLSWVMEAAAIMAIALA--------NGGGRDPDWQDFVGIIVLLVINSTISFIEENNAG 123
NP+ +V+E ++A+ L R + F+ +++ LV + + E
Sbjct: 32 NPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGK 91
Query: 124 NAAAALMANLAPKT--KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKI 181
A AL ++ +DG + DAS L G ++ + G+ +P D ++++G +
Sbjct: 92 AQANALRQTQTEMKARRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKG-LATV 150
Query: 182 DQSALTGESLPVTKNP---YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQV 238
D+SA+TGES PV K +D V G++ +E + + H+F K LV+ +
Sbjct: 151 DESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATR- 209
Query: 239 GHFQKVLTAIGNFCIC-SIAVGIVAEIIIMYPV-QHRKYRDGIDNLLVLLIGGIPIAMPT 296
+K I F + ++ + + I+ MYP+ + + I L+ L + IP +
Sbjct: 210 ---KKTPNEIALFTLLMTLTIIFLVVILTMYPLAKFLNFNLSIAMLIALAVCLIPTTIGG 266
Query: 297 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLTVDRNLIEVFA 355
+LS G R++Q + K ++E ++VL DKTGT+T N++ I V +
Sbjct: 267 LLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADA--FIPVKS 324
Query: 356 KGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALT 415
E+ L+ A + D + + LA + ++PF + + +
Sbjct: 325 SSFER----LVKAAYESSIADDTPEGRSIVKLAYKQHIDLPQEVGEYIPFTAETRMSGVK 380
Query: 416 YIDSDGNWHRASKGAPEQILA-LCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT 474
+ + KGAP ++ + + + A++ +++G L V
Sbjct: 381 FTTRE-----VYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVLEDNE---- 431
Query: 475 KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534
++G++ L D + E R +G+ M TGD + G
Sbjct: 432 ---------ILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAG--- 479
Query: 535 NMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDG 594
VD + + PE K +++ Q + HI MTGDG
Sbjct: 480 ---------------------VDRFVAECK------PEDKINVIREEQAKGHIVAMTGDG 512
Query: 595 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 654
NDAPAL +A++G+A+ T +A+ A++++ + + ++ VL + + + T ++
Sbjct: 513 TNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFS 572
Query: 655 VS 656
++
Sbjct: 573 IA 574
|
Length = 673 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 116 bits (291), Expect = 1e-26
Identities = 139/581 (23%), Positives = 233/581 (40%), Gaps = 89/581 (15%)
Query: 70 MWNPLSWVMEAAAIM----AIALANGGGRDPDWQDFVGII--VLLVINSTISFIEENNAG 123
NP+ +++ +++ IA A+ G + F II +L + +F E G
Sbjct: 30 WRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEG 89
Query: 124 NAAAALMANLAPKTK-------VLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176
A A+ TK + DG + A L GD++ ++ GD++P D ++EG
Sbjct: 90 RGKA--QADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEG 147
Query: 177 DPLKIDQSALTGESLPVTKNP---YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD 233
+D+SA+TGES PV K + V G+ + A TF + LV+
Sbjct: 148 VA-SVDESAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTANPGETFLDRMIALVE 206
Query: 234 STNQVGHFQKVLTAIG-NFCICSIAVGIVAEIIIMYPVQHRKYRD---GIDNLLVLLIGG 289
+ +K I + ++ + + ++P Y + L+ LL+
Sbjct: 207 GAQR----RKTPNEIALTILLIALTLVFLLVTATLWPFAA--YGGNAISVTVLVALLVCL 260
Query: 290 IPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLTVDR 348
IP + +LS G R+ I A+E +D L DKTGT+TL N+L +
Sbjct: 261 IPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEF 320
Query: 349 NLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPV 408
+ A+GV+++ + A AS + D + + +LA R + F
Sbjct: 321 ----IPAQGVDEKTLADAAQLASLAD--DTPEGKSIVILAKQLGIREDDVQSLHATFVEF 374
Query: 409 DKRTALTYIDSDGNWHRASKGAPEQILALCNCREDV-RKKVHAVIDKFAERGLRSLGVAR 467
+T ++ I+ D N KGA + I + +D+ A +G L V
Sbjct: 375 TAQTRMSGINLD-NGRMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCE 433
Query: 468 QEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ----LAIG 523
++ G++ L D + E + +G+ MITGD AI
Sbjct: 434 DN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIA 480
Query: 524 KETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQE 583
E G VD+ I +A PE K ++++ Q
Sbjct: 481 AEAG----------------------------VDDFIAEAT------PEDKIALIRQEQA 506
Query: 584 RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
+ MTGDG NDAPAL +AD+G+A+ T AA+ A+++V
Sbjct: 507 EGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMV 547
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 2e-26
Identities = 134/537 (24%), Positives = 207/537 (38%), Gaps = 148/537 (27%)
Query: 138 KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNP 197
K+ G E A+ L GD++ ++ G+I+PAD ++EG +D+SA+TGES PV +
Sbjct: 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDESAITGESAPVIRES 166
Query: 198 ---YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQK----------- 243
+ V G+ I + A +F + LV+ + QK
Sbjct: 167 GGDFSSVTGGTRVLSDWIVIRITANPGESFLDRMIALVEGAKR----QKTPNEIALTILL 222
Query: 244 -VLTAIGNFCIC-------SIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMP 295
LT I F + + G I + L+ LL+ IP +
Sbjct: 223 AGLTII--FLLVVATLPPFAAYSGGALSITV---------------LVALLVCLIPTTIG 265
Query: 296 TVLSVTMAIG---SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLTVDRNLI 351
+LS AIG R+ Q I A+E +D L DKTGT+TL N+ +
Sbjct: 266 GLLS---AIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASE---- 318
Query: 352 EVF--AKGVEKEHVILLAARASRTENQDAIDAAIVGMLADP-----------------KE 392
F GV +E + DAA + LAD +E
Sbjct: 319 --FLPVPGVTEE---------------ELADAAQLSSLADETPEGRSIVVLAKQRFNLRE 361
Query: 393 ARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVHAV 451
F+PF+ +T ++ +D DG KGA + I ++ A
Sbjct: 362 RDLQSLHATFVPFS---AQTRMSGVDLDG--REIRKGAVDAIRRYVESNGGHFPAELDAA 416
Query: 452 IDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVN 511
+D+ A +G L VA +++G++ L D + E +G+
Sbjct: 417 VDEVARKGGTPLVVAEDN-------------RVLGVIYLKDIVKPGIKERFAELRKMGIK 463
Query: 512 VKMITGD-QL---AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567
MITGD L AI E G VD+ + +A
Sbjct: 464 TVMITGDNPLTAAAIAAEAG----------------------------VDDFLAEAT--- 492
Query: 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
PE K ++++ Q + MTGDG NDAPAL +AD+G+A+ T AA+ A ++V
Sbjct: 493 ---PEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMV 546
|
Length = 679 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 91.3 bits (227), Expect = 9e-19
Identities = 57/170 (33%), Positives = 77/170 (45%), Gaps = 38/170 (22%)
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQL----AIGKETGRRLGMGTNMYP 538
+ LL + DP R DS ++R G + M+TGD AI KE G
Sbjct: 640 KAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAG----------- 688
Query: 539 SSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDA 598
+DE+I AGV P+ K E +KRLQ + M GDG+NDA
Sbjct: 689 -----------------IDEVI------AGVLPDGKAEAIKRLQSQGRQVAMVGDGINDA 725
Query: 599 PALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 648
PAL +AD+GIA+ +D A + I L L + A+ SRA + MK
Sbjct: 726 PALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMK 775
|
Length = 834 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 77.6 bits (192), Expect = 1e-17
Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 16 SVDLERIPIEEVFEQLKCSRE-GLTSDEGAHRLHVFGPNKLEE-KKESKVLKFLGFMWNP 73
+D + +EEV E+L+ E GL+S+E A RL +GPN+L KK S +L+FL NP
Sbjct: 1 ELDWHALSLEEVLERLQTDLEKGLSSEEAARRLERYGPNELPPPKKTSPLLRFLRQFHNP 60
Query: 74 LSWVMEAAAIMAIAL 88
L +++ AAA+++ L
Sbjct: 61 LIYILLAAAVLSALL 75
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 66.0 bits (162), Expect = 1e-13
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 21 RIPIEEVFEQLKCSRE-GLTSDEGAHRLHVFGPNKL-EEKKESKVLKFLGFMWNPLSWVM 78
+ +EEV +L E GLT E RL +GPN+L E+K +S FL +PL ++
Sbjct: 3 TLSVEEVLARLGTDLEKGLTEAEAEERLEKYGPNELPEKKPKSLWKIFLRQFKDPLVIIL 62
Query: 79 EAAAIMA 85
AAI++
Sbjct: 63 LIAAIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 3e-08
Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 22/224 (9%)
Query: 155 PGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEA 214
PG ++ + GD VP D + +G+ +D++ LTGE +P K D V +G+ + G +
Sbjct: 343 PGMLLRLTTGDRVPVDGEITQGEAW-LDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLF 401
Query: 215 VVIATGVHTFFGKAAHLV----DSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMY-- 268
A G HT + +V S ++G ++A+ F + + +V+ I +
Sbjct: 402 RASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAV--FVPVVVVIALVSAAIWYFFG 459
Query: 269 PVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVT--MAI--GSHRLSQQGAITKRMTAIEE 324
P Y LV+ + IA P L + M+I G R ++ G + + A++
Sbjct: 460 PAPQIVYT------LVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQR 513
Query: 325 MAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAA 368
+ +D L DKTGTLT K V ++ F GV++ + LAA
Sbjct: 514 ASTLDTLVFDKTGTLTEGKPQVVA--VKTFN-GVDEAQALRLAA 554
|
Length = 834 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 2e-07
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 549 ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608
A +PV+ + FAG PE K +I++ L++R M G+G ND AL++AD+GI
Sbjct: 63 AEFVGIPVERV------FAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGI 116
Query: 609 AV---ADATDAARSASDIVLTEPGLSVIISA 636
+ +D+VL E + +
Sbjct: 117 CTIQQEGVPERLLLTADVVLKEIAEILDLLK 147
|
Length = 152 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 2e-07
Identities = 28/123 (22%), Positives = 45/123 (36%), Gaps = 19/123 (15%)
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 542
++GL+ L DP + E ++ G+ + ++TGD R LG+ +
Sbjct: 84 VVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGLFDALV----- 138
Query: 543 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 602
P ++ E A ++ L + M GDGVND PA K
Sbjct: 139 SADLYGLVGVGKPDPKIFELA--------------LEELGVKPEEVLMVGDGVNDIPAAK 184
Query: 603 KAD 605
A
Sbjct: 185 AAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|234910 PRK01158, PRK01158, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 5e-04
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 592 GDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP 628
GD ND + A G+AVA+A + + A+D V +
Sbjct: 180 GDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKS 216
|
Length = 230 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.001
Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 11/89 (12%)
Query: 557 DELIEKADGFAG------VFPEHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADI 606
+ L + G V +K + + L ++ I GDG ND +K A +
Sbjct: 130 NRLEVEDGKLTGLVEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGL 189
Query: 607 GIAVADATDAARSASDIVLTEPGLSVIIS 635
GIA +A + +DI + + L+ I+
Sbjct: 190 GIAF-NAKPKLQQKADICINKKDLTDILP 217
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.003
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 573 HKYEIVKRLQERKHICG---MT-GDGVNDAPALKKADIGIAVADATDAARSASDIV 624
K +K L + I + GDG ND L+ A +G+A+ +A+ ++A+D V
Sbjct: 186 SKGTALKALAKHLGIDLEEVIAFGDGENDIEMLELAGLGVAMGNASPEVKAAADYV 241
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.004
Identities = 36/166 (21%), Positives = 62/166 (37%), Gaps = 38/166 (22%)
Query: 401 HFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILA-LCNCREDVRKKVHAVIDKFAERG 459
+ L FN KR ++ + DG KGA I L + V ++ ++ +A G
Sbjct: 513 NVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEG 572
Query: 460 LRSLGVARQEIPEKTKESPGAPWQ-----------------------------LVGLLPL 490
LR+L +A +E+ E+ E W L+G +
Sbjct: 573 LRTLCIAYRELSEEEYEE----WNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAI 628
Query: 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM 536
D + ETI G+ + ++TGD++ ET +G +
Sbjct: 629 EDKLQEGVPETIELLRQAGIKIWVLTGDKV----ETAINIGYSCRL 670
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 36.8 bits (86), Expect = 0.004
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 377 DAIDAAIVG----MLADPKEARAGVREVHFLPFNPVDKR-TALTYIDSDGNWHRASKGAP 431
D ++A++ + D +E RA V +PFN KR + + ++ D + KGAP
Sbjct: 22 DPTESALLVFAEKLGIDVEELRARYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAP 81
Query: 432 EQILALCN 439
E+IL C+
Sbjct: 82 ERILERCS 89
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|232824 TIGR00099, Cof-subfamily, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.004
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 573 HKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
K ++ L E I GDG+ND L+ A G+A+ +A + ++ +D V
Sbjct: 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYV 243
|
This subfamily of sequences falls within the Class-IIB subfamily (TIGR01484) of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. The use of the name "Cof" as an identifier here is arbitrary and refers to the E. coli Cof protein. This subfamily is notable for the large number of recent paralogs in many species. Listeria, for instance, has 12, Clostridium, Lactococcus and Streptococcus pneumoniae have 8 each, Enterococcus and Salmonella have 7 each, and Bacillus subtilus, Mycoplasma, Staphylococcus and E. coli have 6 each. This high degree of gene duplication is limited to the gamma proteobacteria and low-GC gram positive lineages. The profusion of genes in this subfamily is not coupled with a high degree of divergence, so it is impossible to determine an accurate phylogeny at the equivalog level. Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars. Possibly the diversification of genes in this subfamily represents the diverse sugars and polysaccharides that various bacteria find in their biological niches. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences [Unknown function, Enzymes of unknown specificity]. Length = 256 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 847 | |||
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.93 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.61 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.41 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 99.4 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.16 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 99.07 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.97 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.9 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.86 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.8 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.78 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 98.76 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.73 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.73 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.7 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.69 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.68 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.65 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.62 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.61 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.55 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.52 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.51 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.47 | |
| PLN02887 | 580 | hydrolase family protein | 98.45 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.44 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.41 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.38 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.38 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.35 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.32 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.32 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.27 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.24 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.19 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.16 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.09 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.03 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.0 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.93 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.93 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.86 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.75 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.69 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.58 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.55 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.41 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.4 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.32 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.28 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.27 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.24 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.04 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.0 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 96.98 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 96.93 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.93 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.89 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 96.79 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.76 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.73 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.71 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 96.69 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.63 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.61 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 96.6 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.53 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.45 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 96.44 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.37 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.34 | |
| PRK06769 | 173 | hypothetical protein; Validated | 96.25 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 96.23 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.23 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.22 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.05 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.03 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 96.01 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 95.82 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 95.76 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 95.7 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 95.59 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 95.57 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 95.56 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 95.44 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 95.34 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 95.16 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 95.11 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 95.01 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 94.96 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 94.8 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 94.76 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 94.69 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 94.66 | |
| PLN02940 | 382 | riboflavin kinase | 94.59 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 94.48 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 94.42 | |
| PLN02580 | 384 | trehalose-phosphatase | 94.21 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 93.96 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 93.81 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 93.75 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 93.67 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 93.3 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 93.29 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 93.04 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 92.84 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 92.73 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 92.57 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 92.45 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 92.16 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 91.83 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 91.65 | |
| PLN02811 | 220 | hydrolase | 90.84 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 90.76 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 90.61 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 89.86 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 89.62 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 89.24 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 89.01 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 88.9 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 88.6 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 88.09 | |
| PLN03017 | 366 | trehalose-phosphatase | 88.0 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 86.14 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 84.54 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 83.68 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 83.26 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 81.42 |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-143 Score=1188.96 Aligned_cols=818 Identities=28% Similarity=0.420 Sum_probs=682.4
Q ss_pred ccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCC
Q 003103 18 DLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRD 95 (847)
Q Consensus 18 ~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~ 95 (847)
+.|..+.+|+++.|.++ ++|||++|+.+|+++||+|+++... .+.|+++++||.||+..+|++++++||++.
T Consensus 3 ~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~------ 76 (972)
T KOG0202|consen 3 EAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA------ 76 (972)
T ss_pred chhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH------
Confidence 46778999999999998 6799999999999999999999755 788999999999999999999999999987
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEe
Q 003103 96 PDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLE 175 (847)
Q Consensus 96 ~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~ 175 (847)
.|.+++.|.+++++|+.++++|||++++++++|+++.++.++|+|+|+.+.++++||||||||.|+-||+||||.++++
T Consensus 77 -~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e 155 (972)
T KOG0202|consen 77 -DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIE 155 (972)
T ss_pred -hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEe
Confidence 7889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCceEEEeccccCCCceeecCC--------------CCccccceeeeeceEEEEEEeccchhHhhhHHHhhhccC-CCCc
Q 003103 176 GDPLKIDQSALTGESLPVTKNP--------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGH 240 (847)
Q Consensus 176 g~~~~Vdes~LTGEs~pv~K~~--------------~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~ 240 (847)
..++.||||+|||||.|+.|.. .|++|+||.|..|.++|+|+.||.+|++|++.+.++..+ +++|
T Consensus 156 ~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTP 235 (972)
T KOG0202|consen 156 AKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTP 235 (972)
T ss_pred eeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCc
Confidence 9889999999999999999954 257999999999999999999999999999999998775 6899
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh--hhhc---c-c---cchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhc
Q 003103 241 FQKVLTAIGNFCICSIAVGIVAEIII--MYPV---Q-H---RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQ 311 (847)
Q Consensus 241 ~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~---~-~---~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~ 311 (847)
+|+.++.++..+.-.+.++++..+++ .|+. . + ..+.+.+..++++.+++||+|||++++++++.|.+||+|
T Consensus 236 Lqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMak 315 (972)
T KOG0202|consen 236 LQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAK 315 (972)
T ss_pred HHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHh
Confidence 99999999987652222222222222 2221 1 2 445567888999999999999999999999999999999
Q ss_pred CCceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecc-----------cCC------------------Ch--
Q 003103 312 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA-----------KGV------------------EK-- 360 (847)
Q Consensus 312 ~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~-----------~~~------------------~~-- 360 (847)
++++||+++++|+||.+++||+|||||||+|+|++.++++.... .++ ..
T Consensus 316 knaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~ 395 (972)
T KOG0202|consen 316 KNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDL 395 (972)
T ss_pred hhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHH
Confidence 99999999999999999999999999999999999987752110 000 11
Q ss_pred -HHHHHHHHHhccc-----c------CcchHHHHHHHhcC-----ChH---H-----------HhccceEEEeecCCCCC
Q 003103 361 -EHVILLAARASRT-----E------NQDAIDAAIVGMLA-----DPK---E-----------ARAGVREVHFLPFNPVD 409 (847)
Q Consensus 361 -~~~l~~~~~~~~~-----~------~~~~~~~ai~~~~~-----~~~---~-----------~~~~~~~~~~~pf~s~~ 409 (847)
.+++..++.|... . .++|.|.|+...+. +.. . ....++...++||+++|
T Consensus 396 l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdr 475 (972)
T KOG0202|consen 396 LQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDR 475 (972)
T ss_pred HHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeeccccc
Confidence 1234445544321 1 35788888876542 111 0 11223455899999999
Q ss_pred cceEEEEEcCCCc--EEEEEcCcHHHHHHhcCC------------ChHHHHHHHHHHHHHHHccCeEEEEEeeecCC---
Q 003103 410 KRTALTYIDSDGN--WHRASKGAPEQILALCNC------------REDVRKKVHAVIDKFAERGLRSLGVARQEIPE--- 472 (847)
Q Consensus 410 k~~~v~~~~~~g~--~~~~~KGa~e~i~~~~~~------------~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~--- 472 (847)
|+|++.+.+..++ +..|+|||+|.|+++|+. ++..++.+.+...+|+++|+|||++|+++.+.
T Consensus 476 K~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~ 555 (972)
T KOG0202|consen 476 KSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVP 555 (972)
T ss_pred ceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccCh
Confidence 9999999866554 789999999999999953 34568899999999999999999999997663
Q ss_pred --------CCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC--CCCcc
Q 003103 473 --------KTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY--PSSSL 542 (847)
Q Consensus 473 --------~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~--~~~~~ 542 (847)
..+...|.+|+|+|++++.||||+|++++|+.|+++||||+|+||||..||.+|||++|+..+.. ....+
T Consensus 556 ~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~ 635 (972)
T KOG0202|consen 556 DDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMAL 635 (972)
T ss_pred hhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcccccccc
Confidence 12445789999999999999999999999999999999999999999999999999999975422 33455
Q ss_pred cCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecc-cccHHHhhcc
Q 003103 543 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSAS 621 (847)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg-~g~~~a~~aa 621 (847)
+|.+. +.++++++++...+..+|+|++|++|.+||++||++|.+|||+|||+||+||||.|||||||| +|||+||+||
T Consensus 636 TG~ef-D~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAs 714 (972)
T KOG0202|consen 636 TGSEF-DDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEAS 714 (972)
T ss_pred chhhh-hcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhh
Confidence 55544 578999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhcCCccHHHHHHHHHHhhhh-hcccccCC
Q 003103 622 DIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGF-MLIALIWKFDFSPFMVLIIAILNDGT-IMTISKDR 699 (847)
Q Consensus 622 Divl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~l~~~~ 699 (847)
|+||.||||++|+.|++|||.+|+|||+|+.|.++.|++.+..+ +...+..+.|++|+|+||+|+++|++ +++|++++
T Consensus 715 DMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep 794 (972)
T KOG0202|consen 715 DMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEP 794 (972)
T ss_pred hcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCC
Confidence 99999999999999999999999999999999999999766554 44557788999999999999999987 89999999
Q ss_pred CCCC---CCCCcc----cHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccc----------CCC------hh
Q 003103 700 VKPS---PQPDSW----KLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSL----------RTR------PD 756 (847)
Q Consensus 700 ~~~~---~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~------~~ 756 (847)
+++. ++|++. ....++...+..|.++++.++..|++.+... .+....+.. .+. ..
T Consensus 795 ~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~--~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~ 872 (972)
T KOG0202|consen 795 VDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGA--DGKVTYRQLAHYNSCCRDFYGSRCAVFEDM 872 (972)
T ss_pred CChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcC--CCCcChhhhcchhhhcccccccchhhhccc
Confidence 8764 233322 2355666677779999988887665554311 111100000 000 01
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccCCCCcccc---chHHHHHHHHHHHHHHHHhhhccccccccccccccChhhHHHHHHH
Q 003103 757 EMMAALYLQVSIISQALIFVTRSRSWSFIER---PGLLLATAFVIAQLVRVHFHLTNLNTTIHMGSSFVSVHDFSWYLFI 833 (847)
Q Consensus 757 ~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 833 (847)
...|+.|..+++...+|.+++||...+.+.. .|.|+++++.++.+. ++..+|.++.+.+|.+.++++.+|.+++.+
T Consensus 873 ~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~-~f~ilYvp~l~~iFq~~~l~~~ew~~vl~~ 951 (972)
T KOG0202|consen 873 CPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVL-HFLVLYVPPLQRIFQTEPLSLAEWLLVLAI 951 (972)
T ss_pred ccceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHh-hheEEEechhhhhheecCCcHHHHHHHHHH
Confidence 2247889999999999999999988655443 255898888877554 777889999999999999999999999988
Q ss_pred Hhhh--HHHHHHhhc
Q 003103 834 ETSS--LSEMMHLFQ 846 (847)
Q Consensus 834 ~~~~--f~~~~~~~~ 846 (847)
..+. +||..|++.
T Consensus 952 s~~V~i~dEilK~~~ 966 (972)
T KOG0202|consen 952 SSPVIIVDEILKFIA 966 (972)
T ss_pred hhhhhhHHHHHHHHH
Confidence 8776 899999874
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-139 Score=1125.87 Aligned_cols=802 Identities=86% Similarity=1.293 Sum_probs=777.5
Q ss_pred hhhhcccCcccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccccchHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 003103 9 LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIAL 88 (847)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~ 88 (847)
++..+++..+....+.||+++.|.++..|||++|+++|+++||+|++++++.+.+++|+..||||+.|++..++++.+.+
T Consensus 8 ~~di~~E~vdl~~~p~eeVfeeL~~t~~GLt~~E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswVMEaAAimA~~L 87 (942)
T KOG0205|consen 8 LEDIKKEQVDLEAIPIEEVFEELLCTREGLTSDEVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIGL 87 (942)
T ss_pred hhhhhhhccccccCchhhhHHHHhcCCCCCchHHHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 78888999999999999999999999889999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCeec
Q 003103 89 ANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVP 168 (847)
Q Consensus 89 ~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vP 168 (847)
..+++.+++|.++..|..++++|+.++|+||+++.++.++|++.+.++++|+|||+|.++++++||||||+.++.||+||
T Consensus 88 ang~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiP 167 (942)
T KOG0205|consen 88 ANGGGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIP 167 (942)
T ss_pred hcCCCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEeeCceEEEeccccCCCceeecCCCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhccCCCCchHHHHHHH
Q 003103 169 ADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248 (847)
Q Consensus 169 aD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~~ 248 (847)
||+++++|+-++||+|.|||||.|+.|++||.+|+||+|.+|++.++|++||.+|..||.++++.++.+..+|++.++.+
T Consensus 168 aDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst~~~GHFqkVLt~I 247 (942)
T KOG0205|consen 168 ADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTGI 247 (942)
T ss_pred CccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcCCCCcccHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999998999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceeccchhhhhcCCe
Q 003103 249 GNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 328 (847)
Q Consensus 249 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v 328 (847)
++++++.+++.+++.+.++|+.+.+.+.....+.+.+++..+|.++|.++++.+++|+.||+++|.++|+..++|.|+.+
T Consensus 248 Gn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGm 327 (942)
T KOG0205|consen 248 GNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 327 (942)
T ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCc
Confidence 99999999999999888999888888998888888889999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCccccCceEEEEEeeeecccCCChHHHHHHHHHhccccCcchHHHHHHHhcCChHHHhccceEEEeecCCCC
Q 003103 329 DVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPV 408 (847)
Q Consensus 329 ~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~s~ 408 (847)
|++|+|||||||.|+++|.+..++.+.++.++++++..|+.+++.+++|.+|.|+++.+.||++.+.+++.++++|||+.
T Consensus 328 dVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~PFnPV 407 (942)
T KOG0205|consen 328 DVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLPFNPV 407 (942)
T ss_pred eEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeeccCCcc
Confidence 99999999999999999999888788899999999999999999999999999999999999999999999999999999
Q ss_pred CcceEEEEEcCCCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEe
Q 003103 409 DKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLL 488 (847)
Q Consensus 409 ~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i 488 (847)
.||.+..+.+++|+++.++|||||.|++.|+.+.++++...+.+++|+++|+|.+++|++..++...+.....++|+|+.
T Consensus 408 ~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gll 487 (942)
T KOG0205|consen 408 DKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGLL 487 (942)
T ss_pred ccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999998888888999999999
Q ss_pred cccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE
Q 003103 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (847)
Q Consensus 489 ~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 568 (847)
-+-||||.++.++|++....|++|+|+|||....++..++++|+..|.++++.+.|...++.+...+.++++++.+-||.
T Consensus 488 p~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAg 567 (942)
T KOG0205|consen 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAG 567 (942)
T ss_pred ccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccc
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred eChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHH
Q 003103 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 648 (847)
Q Consensus 569 ~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~ 648 (847)
+.|+||+++|+.||++||.|+|+|||+||+||||.||+|||+..++|+|+.+||+|++++.++.|+.++..+|.+|+||+
T Consensus 568 VfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltSraIfqrmk 647 (942)
T KOG0205|consen 568 VFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647 (942)
T ss_pred cCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHhhhhhcccccCCCCCCCCCCcccHHHHHHHHHHHHHHHHHH
Q 003103 649 NYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIM 728 (847)
Q Consensus 649 ~~i~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 728 (847)
.|..|+++..+-+++.++...+.|.+.|+|++++++.+++|++.|++++|+.+|+|.|.+|+++.+|...+++|.+++++
T Consensus 648 nytiyavsitiriv~gfml~alIw~~df~pfmvliiailnd~t~mtis~d~v~psp~pdswkl~~ifatgvVlgtyma~~ 727 (942)
T KOG0205|consen 648 NYTIYAVSITIRIVFGFMLIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGTYMAIM 727 (942)
T ss_pred hheeeeehhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCCceEEEEcccCCCCCCCcccchhhhheeeeEehhHHHHH
Confidence 99999999999888888888888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccccccccccccCCChhHHHHHHHHHHHHHHHHHhhhhccCCCCccccchHHHHHHHHHHHHHHHHhhh
Q 003103 729 TVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVRVHFHL 808 (847)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 808 (847)
+..+||....+.+|+..++.....+...+.....|+.+++.+++.+|.+|++.|+|.++|+++|+++++.+++++++++.
T Consensus 728 tvif~w~~~~t~ff~~~f~v~~~~~~~~~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg~~L~~af~~aqliatliav 807 (942)
T KOG0205|consen 728 TVIFFWAAYTTDFFPRTFGVRSLFGNEHELMSALYLQVSIISQALIFVTRSRSWSFVERPGWLLLIAFFAAQLIATLIAV 807 (942)
T ss_pred HHHHhhhhccccccccccceeeccCCHHHHHHhhhhhheehhceeeEEEeccCCccccCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988999988888777777777778889999999999999999999999999999999999999999999988
Q ss_pred cc
Q 003103 809 TN 810 (847)
Q Consensus 809 ~~ 810 (847)
|.
T Consensus 808 ya 809 (942)
T KOG0205|consen 808 YA 809 (942)
T ss_pred Hh
Confidence 75
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-134 Score=1207.12 Aligned_cols=752 Identities=59% Similarity=0.936 Sum_probs=671.9
Q ss_pred CCCHHHHHHHHhhcCCCccCccccchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHH
Q 003103 37 GLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISF 116 (847)
Q Consensus 37 GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~ 116 (847)
|||++|+++|+++||+|+++.++++.|+.|+++|++|++++|+++++++++++ +|.+++++++++++++.+++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~-------~~~~~~~i~~~~~i~~~i~~ 73 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE-------NWVDFVIILGLLLLNATIGF 73 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc-------chhhhhhhhhhhHHHHHHHH
Confidence 89999999999999999999877888999999999999999999999999976 89999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEeeCceEEEeccccCCCceeecC
Q 003103 117 IEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKN 196 (847)
Q Consensus 117 ~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~~~Vdes~LTGEs~pv~K~ 196 (847)
+||+++++++++|+++.+++++|+|||++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.|+.|.
T Consensus 74 ~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 74 IEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEec
Confidence 99999999999999999999999999999999999999999999999999999999999976999999999999999999
Q ss_pred CCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhccC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccch
Q 003103 197 PYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKY 275 (847)
Q Consensus 197 ~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 275 (847)
++|.+|+||.|.+|+++++|++||.+|++|+|.+++++++ +++++|+.+++++.+++..+++.+++.+++.+...+.++
T Consensus 154 ~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~ 233 (755)
T TIGR01647 154 TGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233 (755)
T ss_pred cCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999999999999999999999999999999999998876 667999999999988665544433333333333256778
Q ss_pred HhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecc
Q 003103 276 RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA 355 (847)
Q Consensus 276 ~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~ 355 (847)
..++.+++++++++|||+||++++++++.+++||+|+|+++|+++++|+||++|++|||||||||+|+|+|.++.. ..
T Consensus 234 ~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~--~~ 311 (755)
T TIGR01647 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILP--FF 311 (755)
T ss_pred HHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEe--cC
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999998764 22
Q ss_pred cCCChHHHHHHHHHhccccCcchHHHHHHHhcCChHHHhccceEEEeecCCCCCcceEEEEEcCC-CcEEEEEcCcHHHH
Q 003103 356 KGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD-GNWHRASKGAPEQI 434 (847)
Q Consensus 356 ~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~s~~k~~~v~~~~~~-g~~~~~~KGa~e~i 434 (847)
.+.+.++++.+++.++....+||++.|+++++.+....+..++..+.+||++.+|+|++++++.+ |+.++++||+||.+
T Consensus 312 ~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~i 391 (755)
T TIGR01647 312 NGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVI 391 (755)
T ss_pred CCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHH
Confidence 23567778888887765566799999999987655444566888899999999999999887654 77788999999999
Q ss_pred HHhcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEE
Q 003103 435 LALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKM 514 (847)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~m 514 (847)
+++|+...+.++++++.+++++++|+|++++|+++ .|++|+|+|+++++||+|||++++|++||++||+|+|
T Consensus 392 l~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~m 463 (755)
T TIGR01647 392 LDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463 (755)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEE
Confidence 99998766777888899999999999999999973 2678999999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCC
Q 003103 515 ITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDG 594 (847)
Q Consensus 515 iTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG 594 (847)
+||||+.||.++|+++||..+......+....+.+.++++++++.++++++|||++|+||.++|+.||++|++|+|+|||
T Consensus 464 iTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDG 543 (755)
T TIGR01647 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDG 543 (755)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 99999999999999999976433333333333445678889999999999999999999999999999999999999999
Q ss_pred cCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 003103 595 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKF 674 (847)
Q Consensus 595 ~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~ 674 (847)
+||+||||+||||||||+|+|+||++||+||++|||++|++++++||++|+||+|++.|.++.|+..++.++...+++++
T Consensus 544 vNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~ 623 (755)
T TIGR01647 544 VNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNF 623 (755)
T ss_pred cccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999888777777767778
Q ss_pred CccHHHHHHHHHHhhhhhcccccCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCC
Q 003103 675 DFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTR 754 (847)
Q Consensus 675 ~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (847)
+++|+|++|+|+++|++++++++|+++|+++|++|...+++..+++.|+++++.+|++|++.+...++....+. ...
T Consensus 624 ~l~~~~il~~~l~~d~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 700 (755)
T TIGR01647 624 YFPPIMVVIIAILNDGTIMTIAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGL---QLL 700 (755)
T ss_pred chhHHHHHHHHHHHhHhHhhccCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccc---ccc
Confidence 89999999999999999999999999999999999999999999999999999999888777642222111111 113
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhccCCCCccccchHHHHHHHHHHHHHHHHhhh
Q 003103 755 PDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVRVHFHL 808 (847)
Q Consensus 755 ~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 808 (847)
..+++|++|+.++++|++++|++|+++.+|+++|++++++++++..++.++++.
T Consensus 701 ~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~ 754 (755)
T TIGR01647 701 HGNLQSLIYLQVSISGQATIFVTRTHGFFWSERPGKLLFIAFVIAQIIATFIAV 754 (755)
T ss_pred HhhhHHHHHHHHHHHHHHHHheeccCCCCcccCCcHHHHHHHHHHHHHHHHHhh
Confidence 457899999999999999999999999999999999999999998888777664
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-134 Score=1217.38 Aligned_cols=805 Identities=26% Similarity=0.418 Sum_probs=681.9
Q ss_pred cccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccc-chHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCC
Q 003103 17 VDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE-SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRD 95 (847)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~ 95 (847)
...++.+.++++++++++.+|||++|+++|+++||+|+++.+++ ++|+.|+++|++|++++++++++++++++
T Consensus 47 ~~~~~~~~~~v~~~l~~~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~------ 120 (902)
T PRK10517 47 LKAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE------ 120 (902)
T ss_pred HHHHcCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc------
Confidence 34678899999999999999999999999999999999998875 56788999999999999999999999875
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEC------CeEEEEeCCCCCCCcEEEEcCCCeecc
Q 003103 96 PDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD------GRWSEQDASILVPGDVISIKLGDIVPA 169 (847)
Q Consensus 96 ~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rd------g~~~~I~~~~Lv~GDiV~l~~G~~vPa 169 (847)
+|.++++|+++++++..++++||+|+++++++|+++.+++++|+|| |++++|+++||||||+|.|++||+|||
T Consensus 121 -~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPa 199 (902)
T PRK10517 121 -DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPA 199 (902)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEee
Confidence 8999999999999999999999999999999999999999999999 789999999999999999999999999
Q ss_pred ceEEEeeCceEEEeccccCCCceeecCCCC-------------ccccceeeeeceEEEEEEeccchhHhhhHHHhhhcc-
Q 003103 170 DARLLEGDPLKIDQSALTGESLPVTKNPYD-------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 235 (847)
Q Consensus 170 D~~ll~g~~~~Vdes~LTGEs~pv~K~~~~-------------~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~- 235 (847)
||+|++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|+++++|++||.+|++|+|+++++++
T Consensus 200 Dg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~ 279 (902)
T PRK10517 200 DLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQD 279 (902)
T ss_pred eEEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccC
Confidence 999999988999999999999999998874 799999999999999999999999999999999876
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCce
Q 003103 236 NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 315 (847)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~il 315 (847)
++++++|+.+++++++++.+.++...+. ++.+...+.+|.+++..++++++++|||+||++++++++.|+.||+|+|++
T Consensus 280 ~~~t~lq~~~~~i~~~l~~~~~~~~~~v-~~i~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~il 358 (902)
T PRK10517 280 SEPNAFQQGISRVSWLLIRFMLVMAPVV-LLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVI 358 (902)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcE
Confidence 4679999999999877554433322222 222223345788899999999999999999999999999999999999999
Q ss_pred eccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccCCChHHHHHHHHHhcccc--CcchHHHHHHHhcCCh--H
Q 003103 316 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTE--NQDAIDAAIVGMLADP--K 391 (847)
Q Consensus 316 vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~ai~~~~~~~--~ 391 (847)
+|+++++|++|++|++|||||||||+|+|+|.+... ..+.+.++++..++.++... .+||+|.|++.++... .
T Consensus 359 Vk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~---~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~ 435 (902)
T PRK10517 359 VKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTD---ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESAR 435 (902)
T ss_pred EecchhhhhccCCCEEEecCCCccccceEEEEEEec---CCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchh
Confidence 999999999999999999999999999999987531 12344566777766654322 4699999999876432 2
Q ss_pred HHhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCC----------ChHHHHHHHHHHHHHHHccCe
Q 003103 392 EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLR 461 (847)
Q Consensus 392 ~~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r 461 (847)
.....++.++++||+|.+|+|+++++..++.+.+++||+||.++++|+. +++.++.+.+..++++++|+|
T Consensus 436 ~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~r 515 (902)
T PRK10517 436 SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLR 515 (902)
T ss_pred hhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCE
Confidence 2345678899999999999999988766677889999999999999963 234456777888999999999
Q ss_pred EEEEEeeecCCCCC---CCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCC
Q 003103 462 SLGVARQEIPEKTK---ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP 538 (847)
Q Consensus 462 vl~~a~~~~~~~~~---~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~ 538 (847)
++++||++++..+. ...|++++|+|+++|+||+|||++++|++||++||+|+|+||||+.||.++|+++||..
T Consensus 516 vlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~---- 591 (902)
T PRK10517 516 VVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA---- 591 (902)
T ss_pred EEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc----
Confidence 99999998754321 12378999999999999999999999999999999999999999999999999999952
Q ss_pred CCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHh
Q 003103 539 SSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 618 (847)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~ 618 (847)
...+.|.+. +.++++++++.++++.||||++|+||.++|+.||++|++|+|+|||+||+||||+||||||||+|+|+||
T Consensus 592 ~~v~~G~el-~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAk 670 (902)
T PRK10517 592 GEVLIGSDI-ETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAR 670 (902)
T ss_pred cCceeHHHH-HhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHH
Confidence 244555544 4788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCccHHHHHHHHHHhhhhhccccc
Q 003103 619 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWK-FDFSPFMVLIIAILNDGTIMTISK 697 (847)
Q Consensus 619 ~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~~~~l~~ 697 (847)
++||+||+||||++|++++++||++|+||+|++.|.++.|+..++.++++.++++ +|++|+|++|+|+++|++++++++
T Consensus 671 eaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D~~~~al~~ 750 (902)
T PRK10517 671 EAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPF 750 (902)
T ss_pred HhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHhhcC
Confidence 9999999999999999999999999999999999999999988887777766666 699999999999999988999999
Q ss_pred CCCCCCC--CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCChhHHHHHHHHHHHHHHHHHhh
Q 003103 698 DRVKPSP--QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIF 775 (847)
Q Consensus 698 ~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~ 775 (847)
|++++.. +|++|+...+.+.+++.|++.+++++..|++++.. ++... .......++..|.+++++|.++++
T Consensus 751 d~~~~~~m~~p~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~F~~~~~~q~~~~~ 823 (902)
T PRK10517 751 DNVDDEQIQKPQRWNPADLGRFMVFFGPISSIFDILTFCLMWWV------FHANT-PETQTLFQSGWFVVGLLSQTLIVH 823 (902)
T ss_pred CCCChhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------ccccc-hhhHhHHHHHHHHHHHHHHHHHHH
Confidence 9998873 67778877788888888999888887766665321 11000 001123556779999999999999
Q ss_pred hhccCC-CCccccchHHHHHHHHHHHHHHHHhhhccccccccccccccC--hhhHHHHHHHHhhhHHHHHHhhc
Q 003103 776 VTRSRS-WSFIERPGLLLATAFVIAQLVRVHFHLTNLNTTIHMGSSFVS--VHDFSWYLFIETSSLSEMMHLFQ 846 (847)
Q Consensus 776 ~~rs~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~i~~~~f~~~~~~~~ 846 (847)
++|+++ ++|.+++.+..++..++.+++.+.+++. +....|++.+++ +..|.+.+.+....++|.+|.+|
T Consensus 824 ~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~K~~~ 895 (902)
T PRK10517 824 MIRTRRIPFIQSRAAWPLMIMTLIVMAVGIALPFS--PLASYLQLQALPLSYFPWLVAILAGYMTLTQLVKGFY 895 (902)
T ss_pred hhccCCCCcccchHHHHHHHHHHHHHHHHHHhhHH--HHHHhhCCcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999987 4444334333333333333332333222 334457888888 78888888888888999999875
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-132 Score=1207.70 Aligned_cols=811 Identities=26% Similarity=0.428 Sum_probs=673.3
Q ss_pred cccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHhcC----
Q 003103 17 VDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANG---- 91 (847)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~---- 91 (847)
...|+.+.+|+++.++++.+|||++|+++|+++||+|+++.++ +++|+.|+++|++|+.++|+++++++++++..
T Consensus 25 ~~~~~~~~~~v~~~l~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~ 104 (903)
T PRK15122 25 AREAANSLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLR 104 (903)
T ss_pred HHHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcc
Confidence 4478899999999999999999999999999999999999876 55788899999999999999999999997531
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEC------CeEEEEeCCCCCCCcEEEEcCCC
Q 003103 92 GGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD------GRWSEQDASILVPGDVISIKLGD 165 (847)
Q Consensus 92 ~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rd------g~~~~I~~~~Lv~GDiV~l~~G~ 165 (847)
.+...+|.++++|+++++++..++++||++++++.++|+++.+++++|+|| |++++|+++||||||+|.|++||
T Consensus 105 ~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd 184 (903)
T PRK15122 105 RGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGD 184 (903)
T ss_pred CCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCC
Confidence 122347899999999999999999999999999999999999999999999 48999999999999999999999
Q ss_pred eeccceEEEeeCceEEEeccccCCCceeecCC-----------------------CCccccceeeeeceEEEEEEeccch
Q 003103 166 IVPADARLLEGDPLKIDQSALTGESLPVTKNP-----------------------YDEVFSGSTCKQGEIEAVVIATGVH 222 (847)
Q Consensus 166 ~vPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~-----------------------~~~v~~Gt~v~~G~~~~~V~~tG~~ 222 (847)
+|||||+|++|+++.||||+|||||.|+.|.+ +|++|+||.|.+|+++++|++||.+
T Consensus 185 ~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~ 264 (903)
T PRK15122 185 MIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSR 264 (903)
T ss_pred EEeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccc
Confidence 99999999999888999999999999999975 2689999999999999999999999
Q ss_pred hHhhhHHHhhhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHH
Q 003103 223 TFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTM 302 (847)
Q Consensus 223 T~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~ 302 (847)
|++|||.+++.+.+.++++++.++++++++..+..+.+.+ +++.......+|.+++.+++++++++|||+||+++++++
T Consensus 265 T~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~-v~~~~~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~L 343 (903)
T PRK15122 265 TYFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPV-VLLINGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNL 343 (903)
T ss_pred cHhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhccCCHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 9999999999876667899999998887644332222221 122222234578889999999999999999999999999
Q ss_pred HHHHHHhhcCCceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccCCChHHHHHHHHHhccc--cCcchHH
Q 003103 303 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRT--ENQDAID 380 (847)
Q Consensus 303 ~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~ 380 (847)
+.|+.+|+|+|+++|+++++|+||++|++|||||||||+|+|+|.+.+. ..+.++++++.+++.++.. ..+||++
T Consensus 344 a~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~---~~~~~~~~~l~~a~l~s~~~~~~~~p~e 420 (903)
T PRK15122 344 AKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMD 420 (903)
T ss_pred HHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEc---CCCCChHHHHHHHHHhCCCCCCCCChHH
Confidence 9999999999999999999999999999999999999999999988652 2233455677666654322 2469999
Q ss_pred HHHHHhcCCh--HHHhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCC----------ChHHHHHH
Q 003103 381 AAIVGMLADP--KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKV 448 (847)
Q Consensus 381 ~ai~~~~~~~--~~~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~----------~~~~~~~~ 448 (847)
.|++.++... ......++.++++||++.+|+|++++++.+|++++++|||||.++++|+. +++.++++
T Consensus 421 ~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i 500 (903)
T PRK15122 421 QAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERL 500 (903)
T ss_pred HHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHH
Confidence 9999886432 12234678899999999999999998876788899999999999999963 23345677
Q ss_pred HHHHHHHHHccCeEEEEEeeecCCCC-----CCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHH
Q 003103 449 HAVIDKFAERGLRSLGVARQEIPEKT-----KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIG 523 (847)
Q Consensus 449 ~~~~~~~~~~G~rvl~~a~~~~~~~~-----~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA 523 (847)
.+..++++++|+|++++||++++..+ .+..|++++|+|+++++||+|||++++|++||++||+|+|+||||+.||
T Consensus 501 ~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA 580 (903)
T PRK15122 501 LALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVT 580 (903)
T ss_pred HHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHH
Confidence 88889999999999999999876432 1235789999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhh
Q 003103 524 KETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKK 603 (847)
Q Consensus 524 ~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~ 603 (847)
.++|+++||.. ...++|.+. +.++++++++.+++++||||++|+||.++|+.||++|++|+|+|||+||+||||+
T Consensus 581 ~aIA~~lGI~~----~~vi~G~el-~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ 655 (903)
T PRK15122 581 AKICREVGLEP----GEPLLGTEI-EAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRD 655 (903)
T ss_pred HHHHHHcCCCC----CCccchHhh-hhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHh
Confidence 99999999953 234555444 4788899999999999999999999999999999999999999999999999999
Q ss_pred cCcceecccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCccHHHHH
Q 003103 604 ADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWK-FDFSPFMVL 682 (847)
Q Consensus 604 AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~-~~~~~~~~l 682 (847)
||||||||+|+|+||++||+||+||||++|++++++||++|+||+|++.|.++.|+..++.++++.++.+ +|++|+|++
T Consensus 656 ADVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil 735 (903)
T PRK15122 656 ADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLL 735 (903)
T ss_pred CCEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999987776666555555 799999999
Q ss_pred HHHHHhhhhhcccccCCCCCCC--CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCChhHHHH
Q 003103 683 IIAILNDGTIMTISKDRVKPSP--QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMA 760 (847)
Q Consensus 683 ~~~l~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 760 (847)
|+|+++|++++++++|++++.. +|++|..+.+-+.+++.|+..+++++..|++.+.. +. .+. . +.....+|
T Consensus 736 ~~nli~D~~~lal~~d~~~~~~m~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~--~~~--~-~~~~~~~t 808 (903)
T PRK15122 736 LQNLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWFV--FA--ANS--V-EMQALFQS 808 (903)
T ss_pred HHHHHHHHHHHhhcCCCCCHhhcCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH--hc--cCc--H-hhhhhhHH
Confidence 9999999889999999988764 67777665555555567777777776655543210 10 010 0 00113568
Q ss_pred HHHHHHHHHHHHHhhhhccCCCCccccchHHHHHHHHHHHHHHHHhhhcccc--ccccccccccChhhHHHHHHHHhhh-
Q 003103 761 ALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVRVHFHLTNLN--TTIHMGSSFVSVHDFSWYLFIETSS- 837 (847)
Q Consensus 761 ~~f~~~~~~~~~~~~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~i~~~~- 837 (847)
..|++++++|.+++|++|+++.++++++ ++...++.+.++ .++..|.++ ....|++.++++.+|.+++.+....
T Consensus 809 ~~f~~l~~~q~~~~~~~R~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~ 885 (903)
T PRK15122 809 GWFIEGLLSQTLVVHMLRTQKIPFIQST--AALPVLLTTGLI-MAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGYC 885 (903)
T ss_pred HHHHHHHHHHHHHHHhhCcCCCCcCcch--HHHHHHHHHHHH-HHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 8999999999999999999874444444 333333333232 222333332 4456889999999998887766554
Q ss_pred -HHHHHHhhc
Q 003103 838 -LSEMMHLFQ 846 (847)
Q Consensus 838 -f~~~~~~~~ 846 (847)
..|..|+|+
T Consensus 886 ~~~e~~k~~~ 895 (903)
T PRK15122 886 LVAQGMKRFY 895 (903)
T ss_pred HHHHHHHHHH
Confidence 588887654
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-132 Score=1220.93 Aligned_cols=817 Identities=25% Similarity=0.364 Sum_probs=671.3
Q ss_pred cCcccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC
Q 003103 15 ESVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANGG 92 (847)
Q Consensus 15 ~~~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~ 92 (847)
+..+||.++.+|++++|+++ .+|||++||++|+++||+|+++.++ +++|+.|++||++|+.++|+++++++++++
T Consensus 3 ~~~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~--- 79 (1053)
T TIGR01523 3 EFNAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH--- 79 (1053)
T ss_pred CCCchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh---
Confidence 45789999999999999998 5799999999999999999999876 577899999999999999999999999976
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCeeccceE
Q 003103 93 GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADAR 172 (847)
Q Consensus 93 ~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ 172 (847)
+|.++++|++++++++.++++||+|+++++++|+++.+++++|+|||++++|+++||||||||.|++||+|||||+
T Consensus 80 ----~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~r 155 (1053)
T TIGR01523 80 ----DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLR 155 (1053)
T ss_pred ----hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEE
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeCceEEEeccccCCCceeecCCC---------------CccccceeeeeceEEEEEEeccchhHhhhHHHhhhccC-
Q 003103 173 LLEGDPLKIDQSALTGESLPVTKNPY---------------DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN- 236 (847)
Q Consensus 173 ll~g~~~~Vdes~LTGEs~pv~K~~~---------------~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~- 236 (847)
|++++++.||||+|||||.||.|.+. |++|+||.|.+|+++++|++||.+|++|||++++.+.+
T Consensus 156 Li~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~ 235 (1053)
T TIGR01523 156 LIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGG 235 (1053)
T ss_pred EEEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhh
Confidence 99998899999999999999999642 57899999999999999999999999999999885432
Q ss_pred -----------------------------------CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHH
Q 003103 237 -----------------------------------QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDN 281 (847)
Q Consensus 237 -----------------------------------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (847)
.++|+|+.++++++++.++.++..++.+++.+. ..+...+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~---~~~~~~~~~ 312 (1053)
T TIGR01523 236 LFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF---DVDKEVAIY 312 (1053)
T ss_pred ccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhhHHHHHH
Confidence 138999999999887544333322222221111 123466778
Q ss_pred HHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeee---c---c
Q 003103 282 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEV---F---A 355 (847)
Q Consensus 282 ~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~---~---~ 355 (847)
+++++++++|++||++++++++++++||+++|++||+++++|+||++++||+|||||||+|+|+|.+++... + .
T Consensus 313 av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~ 392 (1053)
T TIGR01523 313 AICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDN 392 (1053)
T ss_pred HHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecC
Confidence 899999999999999999999999999999999999999999999999999999999999999999875421 0 0
Q ss_pred --cCC---------------------------------------C---------hHHHHHHHHHhccc------------
Q 003103 356 --KGV---------------------------------------E---------KEHVILLAARASRT------------ 373 (847)
Q Consensus 356 --~~~---------------------------------------~---------~~~~l~~~~~~~~~------------ 373 (847)
.++ + ..+++..++.|+..
T Consensus 393 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~ 472 (1053)
T TIGR01523 393 SDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWK 472 (1053)
T ss_pred CCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCcee
Confidence 000 0 01245555555421
Q ss_pred cCcchHHHHHHHhcCCh----------HHH-------------------hccceEEEeecCCCCCcceEEEEEcCCC-cE
Q 003103 374 ENQDAIDAAIVGMLADP----------KEA-------------------RAGVREVHFLPFNPVDKRTALTYIDSDG-NW 423 (847)
Q Consensus 374 ~~~~~~~~ai~~~~~~~----------~~~-------------------~~~~~~~~~~pf~s~~k~~~v~~~~~~g-~~ 423 (847)
..+||+|.|++.++... .+. ...+++++.+||+|+||||++++++.++ ++
T Consensus 473 ~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~ 552 (1053)
T TIGR01523 473 AHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETY 552 (1053)
T ss_pred eCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEE
Confidence 12599999998875210 011 2346789999999999999999986544 47
Q ss_pred EEEEcCcHHHHHHhcCC------------ChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCC------------CCCCC
Q 003103 424 HRASKGAPEQILALCNC------------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT------------KESPG 479 (847)
Q Consensus 424 ~~~~KGa~e~i~~~~~~------------~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~------------~~~~e 479 (847)
++++|||||.|+++|+. +++.++.+.+.+++|+++|+||+++|||+++..+ ++..|
T Consensus 553 ~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e 632 (1053)
T TIGR01523 553 NIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAE 632 (1053)
T ss_pred EEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhc
Confidence 89999999999999963 2344677888999999999999999999886431 23468
Q ss_pred CCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC--------CCCcccCccccccC
Q 003103 480 APWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY--------PSSSLLGQDKDASI 551 (847)
Q Consensus 480 ~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~--------~~~~~~~~~~~~~~ 551 (847)
++|+|+|+++++||+|+|++++|++||++||+|+|+||||+.||.++|+++||..+.. ...+++|.+. +.+
T Consensus 633 ~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l-~~l 711 (1053)
T TIGR01523 633 SDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQF-DAL 711 (1053)
T ss_pred cCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHh-hhc
Confidence 8999999999999999999999999999999999999999999999999999964210 1123444433 467
Q ss_pred CcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecc-cccHHHhhccCEEEcCCCh
Q 003103 552 AALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGL 630 (847)
Q Consensus 552 ~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg-~g~~~a~~aaDivl~~~~~ 630 (847)
+++++++++++..||||++|+||.++|+.+|++|++|+|+|||+||+||||+|||||||| +|+|+|+++||++|++|||
T Consensus 712 ~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f 791 (1053)
T TIGR01523 712 SDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNF 791 (1053)
T ss_pred CHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCH
Confidence 788899999999999999999999999999999999999999999999999999999999 8999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------cCCccHHHHHHHHHHhhhh-hcccccCCCCCC
Q 003103 631 SVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIW------KFDFSPFMVLIIAILNDGT-IMTISKDRVKPS 703 (847)
Q Consensus 631 ~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~------~~~~~~~~~l~~~l~~~~~-~~~l~~~~~~~~ 703 (847)
++|+.++++||++|+|++|++.|.++.|+..++.++++.++. ++|++|+|++|+|+++|++ ++++++|++++.
T Consensus 792 ~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~ 871 (1053)
T TIGR01523 792 ASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPD 871 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChh
Confidence 999999999999999999999999999998877776665542 3689999999999999964 899999987653
Q ss_pred -----CCCC--cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---ccccc----cccccccCCChhHHHHHHHHHHHHH
Q 003103 704 -----PQPD--SWKLKEIFATGVVLGSYLAIMTVVFFWLMRKT---DFFSD----AFGVRSLRTRPDEMMAALYLQVSII 769 (847)
Q Consensus 704 -----~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~t~~f~~~~~~ 769 (847)
|+++ +...++++..+++.|+++++.++..|++.++. +...+ +++. ......+++|++|.+++++
T Consensus 872 ~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~t~~f~~l~~~ 949 (1053)
T TIGR01523 872 LMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHA--GCNDVFKARSAAFATMTFC 949 (1053)
T ss_pred HHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccc--cccchhhhHHHHHHHHHHH
Confidence 2222 22235677778888999999888777654321 00000 0000 0012346789999999999
Q ss_pred HHHHhhhhccCCCCccc------------------cchHHHHHHHHHHHHHHHHhhhccccccc-cccccccChhhHHHH
Q 003103 770 SQALIFVTRSRSWSFIE------------------RPGLLLATAFVIAQLVRVHFHLTNLNTTI-HMGSSFVSVHDFSWY 830 (847)
Q Consensus 770 ~~~~~~~~rs~~~~~~~------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 830 (847)
|++++|++|+++.+.++ ..|++++++++++.++ .++.+|.++... +|++.++++ .|.++
T Consensus 950 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l-~~~~~~~p~~~~~~f~~~~l~~-~w~~~ 1027 (1053)
T TIGR01523 950 ALILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVS-AFPTIYIPVINDDVFKHKPIGA-EWGLA 1027 (1053)
T ss_pred HHHHHHHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHH-HHHHHhhhhhhhhhhccCCcch-HHHHH
Confidence 99999999997643221 1456888888777666 445556665654 799999996 68777
Q ss_pred HHHHhh--hHHHHHHhhc
Q 003103 831 LFIETS--SLSEMMHLFQ 846 (847)
Q Consensus 831 l~i~~~--~f~~~~~~~~ 846 (847)
+.+.+. .++|.+|++.
T Consensus 1028 ~~~~~~~~~~~e~~K~~~ 1045 (1053)
T TIGR01523 1028 AAATIAFFFGAEIWKCGK 1045 (1053)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 665554 5899999874
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-132 Score=1203.09 Aligned_cols=804 Identities=26% Similarity=0.407 Sum_probs=678.7
Q ss_pred cccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccc-chHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCC
Q 003103 17 VDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE-SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRD 95 (847)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~ 95 (847)
...|+.+.+++++.++++.+|||++|+++|+++||+|+++.+++ ++|+.|+++|++|++++|+++++++++.+
T Consensus 13 ~~~~~~~~~~~~~~l~~~~~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~------ 86 (867)
T TIGR01524 13 LKESQMGKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD------ 86 (867)
T ss_pred HHHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh------
Confidence 45779999999999999999999999999999999999998765 57889999999999999999999999875
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEE------CCeEEEEeCCCCCCCcEEEEcCCCeecc
Q 003103 96 PDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR------DGRWSEQDASILVPGDVISIKLGDIVPA 169 (847)
Q Consensus 96 ~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r------dg~~~~I~~~~Lv~GDiV~l~~G~~vPa 169 (847)
+|.++++|+++++++..++++||+|++++.++|+++.+++++|+| ||++++|+++||||||+|.+++||+|||
T Consensus 87 -~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPa 165 (867)
T TIGR01524 87 -DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPA 165 (867)
T ss_pred -hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcc
Confidence 899999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred ceEEEeeCceEEEeccccCCCceeecCCCC-------------ccccceeeeeceEEEEEEeccchhHhhhHHHhhhccC
Q 003103 170 DARLLEGDPLKIDQSALTGESLPVTKNPYD-------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN 236 (847)
Q Consensus 170 D~~ll~g~~~~Vdes~LTGEs~pv~K~~~~-------------~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~ 236 (847)
||++++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|+++++|++||.+|++||+.+++.+.+
T Consensus 166 Dg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~ 245 (867)
T TIGR01524 166 DARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERR 245 (867)
T ss_pred cEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhCCC
Confidence 999999987899999999999999998864 6999999999999999999999999999999998866
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCcee
Q 003103 237 QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 316 (847)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilv 316 (847)
+++++|+.++++++++..+.++...+. ++.+.....+|..++..++++++++|||+||++++++++.++.||+|+|+++
T Consensus 246 ~~t~lq~~~~~i~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilv 324 (867)
T TIGR01524 246 GQTAFDKGVKSVSKLLIRFMLVMVPVV-LMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIV 324 (867)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHh-eehHHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEE
Confidence 778999999999987654443322222 2222233457888899999999999999999999999999999999999999
Q ss_pred ccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccCCChHHHHHHHHHhccc--cCcchHHHHHHHhcCCh--HH
Q 003103 317 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRT--ENQDAIDAAIVGMLADP--KE 392 (847)
Q Consensus 317 k~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~ai~~~~~~~--~~ 392 (847)
|+++++|+||++|++|||||||||+|+|+|.+... ..+.+.++++..++.++.. ..+||+|.|++.++.+. ..
T Consensus 325 k~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~---~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~ 401 (867)
T TIGR01524 325 KELSAIQNFGAMDILCTDKTGTLTQDKIELEKHID---SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQ 401 (867)
T ss_pred ccchhhhhccCccEEEecCCCccccCeEEEEEEec---CCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhh
Confidence 99999999999999999999999999999988642 2234456667666654432 23599999999886532 22
Q ss_pred HhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCC----------ChHHHHHHHHHHHHHHHccCeE
Q 003103 393 ARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRS 462 (847)
Q Consensus 393 ~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~rv 462 (847)
.+..++.++.+||+|.+|+|++++++.++.+++++||+||.++++|+. +++.++++.+.+++++++|+|+
T Consensus 402 ~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rv 481 (867)
T TIGR01524 402 TASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRV 481 (867)
T ss_pred HhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEE
Confidence 345678889999999999999998765666789999999999999963 2344667888889999999999
Q ss_pred EEEEeeecCCCCC---CCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC
Q 003103 463 LGVARQEIPEKTK---ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS 539 (847)
Q Consensus 463 l~~a~~~~~~~~~---~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~ 539 (847)
+++||++++..+. +..|++|+|+|+++++||+|||++++|++||++||+|+|+||||+.||.++|+++||.. .
T Consensus 482 lavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~----~ 557 (867)
T TIGR01524 482 IAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA----N 557 (867)
T ss_pred EEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC----C
Confidence 9999998765321 12478899999999999999999999999999999999999999999999999999963 2
Q ss_pred CcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhh
Q 003103 540 SSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARS 619 (847)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~ 619 (847)
..+.|.+. +.++++++++.+++++||||++|+||.++|+.||++|++|+|+|||+||+||||+||||||||+|+|+||+
T Consensus 558 ~v~~g~~l-~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~ 636 (867)
T TIGR01524 558 DFLLGADI-EELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKE 636 (867)
T ss_pred CeeecHhh-hhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHH
Confidence 34455443 46788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCccHHHHHHHHHHhhhhhcccccC
Q 003103 620 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWK-FDFSPFMVLIIAILNDGTIMTISKD 698 (847)
Q Consensus 620 aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~~~~l~~~ 698 (847)
+||+||+||||++|++++++||++|+||+|++.|.++.|+..++.++++.++.+ +|++|+|++|+|+++|++++++++|
T Consensus 637 aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d~~~~al~~~ 716 (867)
T TIGR01524 637 ASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYDFSQLTLPWD 716 (867)
T ss_pred hCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999999999999988877766665555 7999999999999999889999999
Q ss_pred CCCCCC--CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCChhHHHHHHHHHHHHHHHHHhhh
Q 003103 699 RVKPSP--QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFV 776 (847)
Q Consensus 699 ~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~ 776 (847)
++++.. +|++|..+.+.+.+++.|++.+++++..|++++...... + . ......+|..|++++++|.+++|+
T Consensus 717 ~~~~~~m~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~---~-~~~~~~~t~~f~~~~~~~~~~~~~ 789 (867)
T TIGR01524 717 KMDREFLKKPHQWEQKGMGRFMLCIGPVSSIFDIATFLLMWFVFSAN---T---V-EEQALFQSGWFVVGLLSQTLVVHM 789 (867)
T ss_pred CCChHhhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---c---h-hhhhHHHHHHHHHHHHHHHHHHHh
Confidence 988763 566677777777778889888877776665543211000 0 0 012335788999999999999999
Q ss_pred hccCCCCccccchHHHHHHHHHHHHHHHHhhhcccc--cccccccccc--ChhhHHHHHHHHhhhHHHHHHhhc
Q 003103 777 TRSRSWSFIERPGLLLATAFVIAQLVRVHFHLTNLN--TTIHMGSSFV--SVHDFSWYLFIETSSLSEMMHLFQ 846 (847)
Q Consensus 777 ~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~l~i~~~~f~~~~~~~~ 846 (847)
+|+++.++++|+ +++.+++.+.++.. +..|.++ ....|++.++ ++..|.+++.+....+.|+.|+|+
T Consensus 790 ~R~~~~~~~~n~--~~~~~~~~~~~~~~-~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~ 860 (867)
T TIGR01524 790 IRTEKIPFIQSR--AAAPVMIATLLVMA-LGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGYMATMQLVKTFY 860 (867)
T ss_pred hCcCCCCcCcch--HHHHHHHHHHHHHH-HHHHhchhhhhhhhccccCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999874444454 34444443333322 2233222 2456888877 556788887777778899999775
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-132 Score=1202.96 Aligned_cols=807 Identities=30% Similarity=0.485 Sum_probs=680.3
Q ss_pred CcccccCCHH--HHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHhcC
Q 003103 16 SVDLERIPIE--EVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANG 91 (847)
Q Consensus 16 ~~~~~~~~~~--~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~ 91 (847)
...||..+.+ ++...+.++ .+|||++|+.+|+++||+|+++..+ .+.|..|+++|++|+.++|+++++++++++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~-- 97 (917)
T COG0474 20 SETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVG-- 97 (917)
T ss_pred cccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 4568888888 999999877 6799999999999999999999765 678999999999999999999999999976
Q ss_pred CCCCCch----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCee
Q 003103 92 GGRDPDW----QDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIV 167 (847)
Q Consensus 92 ~~~~~~~----~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~v 167 (847)
.| .++..|+.++++|++++++||+|+++++++++++.+++++|+|||++++|+++||||||||++++||+|
T Consensus 98 -----~~~~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~v 172 (917)
T COG0474 98 -----DWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVV 172 (917)
T ss_pred -----cccccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCcc
Confidence 55 566688899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEeeCceEEEeccccCCCceeecCC--------------CCccccceeeeeceEEEEEEeccchhHhhhHHHhhh
Q 003103 168 PADARLLEGDPLKIDQSALTGESLPVTKNP--------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD 233 (847)
Q Consensus 168 PaD~~ll~g~~~~Vdes~LTGEs~pv~K~~--------------~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~ 233 (847)
|||++|+++++++||||+|||||.|+.|.+ .|++|+||.+.+|++.++|++||++|++|+++.++.
T Consensus 173 PAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~ 252 (917)
T COG0474 173 PADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLP 252 (917)
T ss_pred ccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhc
Confidence 999999999888999999999999999963 478999999999999999999999999999999999
Q ss_pred cc-CCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcC
Q 003103 234 ST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQ 312 (847)
Q Consensus 234 ~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~ 312 (847)
.. ...+++++.+++++.+++.+.+++.++.++..++..+.+|...+.++++++++++|++||+.++++++.++.+|+++
T Consensus 253 ~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~ 332 (917)
T COG0474 253 TKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKD 332 (917)
T ss_pred cccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhc
Confidence 88 68899999999999886655555444433333332233488999999999999999999999999999999999999
Q ss_pred CceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccCCC------h---HHHHHHHHHhccc--c------C
Q 003103 313 GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVE------K---EHVILLAARASRT--E------N 375 (847)
Q Consensus 313 ~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~------~---~~~l~~~~~~~~~--~------~ 375 (847)
++++|+++++|+||++|+||+|||||||+|+|+|.+++........+ . .+++..++.|+.. . .
T Consensus 333 ~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~ 412 (917)
T COG0474 333 NAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQA 412 (917)
T ss_pred cchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCceec
Confidence 99999999999999999999999999999999999988642011111 1 1245555556522 2 4
Q ss_pred cchHHHHHHHhcC------ChHHHhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCC-------Ch
Q 003103 376 QDAIDAAIVGMLA------DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC-------RE 442 (847)
Q Consensus 376 ~~~~~~ai~~~~~------~~~~~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~-------~~ 442 (847)
+||+|.|++.++. +.......+++++++||+|+||||++++++.+|++++++|||||.|+++|+. .+
T Consensus 413 gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~ 492 (917)
T COG0474 413 GDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTE 492 (917)
T ss_pred CCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCH
Confidence 6999999999874 3444556667899999999999999999977777999999999999999973 45
Q ss_pred HHHHHHHHHHHHHHHccCeEEEEEeeecCCCCC----CCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCC
Q 003103 443 DVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK----ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGD 518 (847)
Q Consensus 443 ~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~----~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD 518 (847)
+.++.+.+..++|+++||||+++|||..+..+. +..|++|+|+|+++|+||||+|++++|+.|++|||++||+|||
T Consensus 493 ~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD 572 (917)
T COG0474 493 EGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGD 572 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCC
Confidence 678899999999999999999999998765443 5689999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCh
Q 003103 519 QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDA 598 (847)
Q Consensus 519 ~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~ 598 (847)
|+.||++||++||+..+......++|.+ .+.++++++.+.++++.||||+||+||.++|+.||++|++|+|||||+||+
T Consensus 573 ~~~TA~aIa~~~Gi~~~~~~~~vi~G~e-l~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDa 651 (917)
T COG0474 573 HVETAIAIAKECGIEAEAESALVIDGAE-LDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDA 651 (917)
T ss_pred CHHHHHHHHHHcCCCCCCCceeEeehHH-hhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhH
Confidence 9999999999999875432212444444 346778899999999999999999999999999999999999999999999
Q ss_pred hhhhhcCcceecc-cccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhhc-CC
Q 003103 599 PALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA-LIWK-FD 675 (847)
Q Consensus 599 ~aLk~AdVGIamg-~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~-~~~~-~~ 675 (847)
||||+|||||||| +|+|+||+|||+++.+|+|++|+.++++||++|.|++|++.|.++.|+..++.++++. +..+ +|
T Consensus 652 pALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p 731 (917)
T COG0474 652 PALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLP 731 (917)
T ss_pred HHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 9999999999998 7999999999999999999999999999999999999999999999998666655554 4444 68
Q ss_pred ccHHHHHHHHHHhhhh-hcccccCCCCC------CCCCCc--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Q 003103 676 FSPFMVLIIAILNDGT-IMTISKDRVKP------SPQPDS--WKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAF 746 (847)
Q Consensus 676 ~~~~~~l~~~l~~~~~-~~~l~~~~~~~------~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 746 (847)
++|+|++|+|+++|++ +++++.+++++ +++|++ |..+.++++++..|+..++..++.|.+.+...... ..
T Consensus 732 ~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~-~~ 810 (917)
T COG0474 732 LTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIAN-TL 810 (917)
T ss_pred HHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-cc
Confidence 9999999999999985 78887775322 223444 55566666678888888888887777665322110 00
Q ss_pred cccccCC-ChhHHHHHHHHHHHHHHHHHhhhhccCCCCcccc---chHHHHHHHHHHHHHHHHhhhcccccccccccccc
Q 003103 747 GVRSLRT-RPDEMMAALYLQVSIISQALIFVTRSRSWSFIER---PGLLLATAFVIAQLVRVHFHLTNLNTTIHMGSSFV 822 (847)
Q Consensus 747 ~~~~~~~-~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 822 (847)
+. + .....+|+.|..++++++++.+.+|+.+.++++. +++.++.++++..++..+..+.++.....|.+.++
T Consensus 811 ~~----~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~~~~ 886 (917)
T COG0474 811 GL----DLFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPL 886 (917)
T ss_pred ch----hhHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccCCCC
Confidence 00 0 1456789999999999999999999987666554 57777777777766655555544444357888888
Q ss_pred ChhhHHHHHHHHh
Q 003103 823 SVHDFSWYLFIET 835 (847)
Q Consensus 823 ~~~~~~~~l~i~~ 835 (847)
++..|.+++.+..
T Consensus 887 ~~~~~~~~~~~~~ 899 (917)
T COG0474 887 SLFEWLIAIAVAL 899 (917)
T ss_pred cHHHHHHHHHHHH
Confidence 8778887776663
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-127 Score=1178.87 Aligned_cols=836 Identities=22% Similarity=0.352 Sum_probs=677.1
Q ss_pred chhhhccc-CcccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHHHHhHHHHHHHHHHHH
Q 003103 8 SLEEIKNE-SVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIM 84 (847)
Q Consensus 8 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il 84 (847)
++++.+.. ..+||.++.++++++|+++ .+|||++||++|+++||+|+++.++ .+.|+.|+++|++|++++|++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l 84 (997)
T TIGR01106 5 DLDELKKEVEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAIL 84 (997)
T ss_pred hhhhhhhhccCCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHH
Confidence 44554444 4679999999999999998 6699999999999999999998765 4578899999999999999999999
Q ss_pred HHHHhc-C-----CCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcE
Q 003103 85 AIALAN-G-----GGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDV 158 (847)
Q Consensus 85 ~~~~~~-~-----~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDi 158 (847)
+++... . .....+|+++++++++++++++++++||+|+++++++++++.+++++|+|||++++|+++||||||+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDi 164 (997)
T TIGR01106 85 CFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDL 164 (997)
T ss_pred HHHHHHHhhccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCE
Confidence 887532 1 1123478899999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCeeccceEEEeeCceEEEeccccCCCceeecCCCC----------ccccceeeeeceEEEEEEeccchhHhhhH
Q 003103 159 ISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYD----------EVFSGSTCKQGEIEAVVIATGVHTFFGKA 228 (847)
Q Consensus 159 V~l~~G~~vPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~----------~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i 228 (847)
|.|++||+|||||++++|+.+.||||+|||||.|+.|.+++ ++|+||.|.+|++.++|++||.+|.+|++
T Consensus 165 v~l~~Gd~IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i 244 (997)
T TIGR01106 165 VEVKGGDRIPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRI 244 (997)
T ss_pred EEECCCCEEeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHH
Confidence 99999999999999999977899999999999999998864 69999999999999999999999999999
Q ss_pred HHhhhccC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHH
Q 003103 229 AHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 307 (847)
Q Consensus 229 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~ 307 (847)
.+++++.+ +++++++.++++.+.+....++..++ +++.+...+.+|.+.+.+++++++++|||+||++++++++.+++
T Consensus 245 ~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~ 323 (997)
T TIGR01106 245 ASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVS-FFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAK 323 (997)
T ss_pred HhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHH
Confidence 99887654 67899999999888755443332222 22222334567888888999999999999999999999999999
Q ss_pred HhhcCCceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeec--c-cC--------CCh-----HHHHHHHHHhc
Q 003103 308 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF--A-KG--------VEK-----EHVILLAARAS 371 (847)
Q Consensus 308 ~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~--~-~~--------~~~-----~~~l~~~~~~~ 371 (847)
+|+++|+++|+++++|+||+++++|||||||||+|+|+|.+++.... . .+ .+. +.++..++.|+
T Consensus 324 ~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn 403 (997)
T TIGR01106 324 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCN 403 (997)
T ss_pred HHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999998764210 0 00 111 23555566654
Q ss_pred cc---------------cCcchHHHHHHHhcC----ChHHHhccceEEEeecCCCCCcceEEEEEcC---CCcEEEEEcC
Q 003103 372 RT---------------ENQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYIDS---DGNWHRASKG 429 (847)
Q Consensus 372 ~~---------------~~~~~~~~ai~~~~~----~~~~~~~~~~~~~~~pf~s~~k~~~v~~~~~---~g~~~~~~KG 429 (847)
.. ..+||+|.|+++++. +..+.+..++.++.+||+|+||||++++... ++++++++||
T Consensus 404 ~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KG 483 (997)
T TIGR01106 404 RAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKG 483 (997)
T ss_pred CCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeC
Confidence 21 125899999998753 3344566788999999999999999887632 2467899999
Q ss_pred cHHHHHHhcCC----------ChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCC--------C---CCCCCceEEEEe
Q 003103 430 APEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK--------E---SPGAPWQLVGLL 488 (847)
Q Consensus 430 a~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~--------~---~~e~~l~~lG~i 488 (847)
|||.|+++|+. +++.++.+.+.+++++++|+||+++||+++++++. + ..|++|+|+|++
T Consensus 484 Ape~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli 563 (997)
T TIGR01106 484 APERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLI 563 (997)
T ss_pred ChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEE
Confidence 99999999962 23456778889999999999999999998864321 1 237899999999
Q ss_pred cccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCC----------------------CCcccCcc
Q 003103 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP----------------------SSSLLGQD 546 (847)
Q Consensus 489 ~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~----------------------~~~~~~~~ 546 (847)
+++||||+|++++|++|+++||+++|+|||++.||.++|+++|+..+... ..++.|.+
T Consensus 564 ~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~ 643 (997)
T TIGR01106 564 SMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSD 643 (997)
T ss_pred eccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHH
Confidence 99999999999999999999999999999999999999999999643110 01333333
Q ss_pred ccccCCcchHHHHHHhcC--eEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecc-cccHHHhhccCE
Q 003103 547 KDASIAALPVDELIEKAD--GFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDI 623 (847)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~--v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg-~g~~~a~~aaDi 623 (847)
.+.++++++++.++++. ||||++|+||.++|+.+|++|++|+|+|||+||+||||+|||||||| +|+|+|+++||+
T Consensus 644 -l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADi 722 (997)
T TIGR01106 644 -LKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADM 722 (997)
T ss_pred -hhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhce
Confidence 34567788899888775 99999999999999999999999999999999999999999999999 799999999999
Q ss_pred EEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCccHHHHHHHHHHhhhh-hcccccCCCC
Q 003103 624 VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALI-WKFDFSPFMVLIIAILNDGT-IMTISKDRVK 701 (847)
Q Consensus 624 vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~-~~~l~~~~~~ 701 (847)
+|+||||++|++++++||++|+|+++++.|.++.|+..++..+++.++ .+.|++|+|++|+|+++|.+ ++++++|+++
T Consensus 723 vL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~ 802 (997)
T TIGR01106 723 ILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAE 802 (997)
T ss_pred EEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999999999999999999999877766665544 55689999999999999974 7999998877
Q ss_pred CC---CCCCcc-----cHHHHH-HHHHHHHHHHHHHHHHHHHHHHhc-cccccc-ccc---------cccCCC-------
Q 003103 702 PS---PQPDSW-----KLKEIF-ATGVVLGSYLAIMTVVFFWLMRKT-DFFSDA-FGV---------RSLRTR------- 754 (847)
Q Consensus 702 ~~---~~~~~~-----~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~-~~~---------~~~~~~------- 754 (847)
+. ++|+++ ..++++ .+.+..|+++++..++.|++.+.. ++.... +++ .+..+.
T Consensus 803 ~~~m~~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 882 (997)
T TIGR01106 803 SDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTY 882 (997)
T ss_pred cccccCCCcCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccch
Confidence 54 223222 123334 344566999998888777655421 211100 110 000000
Q ss_pred ------hhHHHHHHHHHHHHHHHHHhhhhccCCCCcc--ccchHHHHHHHHHHHHHHHHhhhccccccccccccccChhh
Q 003103 755 ------PDEMMAALYLQVSIISQALIFVTRSRSWSFI--ERPGLLLATAFVIAQLVRVHFHLTNLNTTIHMGSSFVSVHD 826 (847)
Q Consensus 755 ------~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (847)
..+.+|++|.+++++|.++++++|+++.+++ ..+|++++.++++.+++..++ .|.++....|++.++++.+
T Consensus 883 ~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~~~l~~~~ 961 (997)
T TIGR01106 883 EQRKYVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFL-SYCPGMGVALRMYPLKPTW 961 (997)
T ss_pred hcccchhhhhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHHHHHHHH-HHhhhhHHHhccccCCHHH
Confidence 0156899999999999999999999764432 245667777777665554444 4444445678999999999
Q ss_pred HHHHHHHHhh--hHHHHHHhhc
Q 003103 827 FSWYLFIETS--SLSEMMHLFQ 846 (847)
Q Consensus 827 ~~~~l~i~~~--~f~~~~~~~~ 846 (847)
|.+++.+.+. .++|.+|++.
T Consensus 962 w~~~~~~~~~~~~~~~~~k~~~ 983 (997)
T TIGR01106 962 WFCAFPYSLLIFVYDEIRKLII 983 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999777654 4888888764
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-126 Score=1162.19 Aligned_cols=798 Identities=27% Similarity=0.409 Sum_probs=672.8
Q ss_pred cccccCCHHHHHHHcCCC-CCCCC-HHHHHHHHhhcCCCccCccc-cchHHHHHHHH-HhHHHHHHHHHHHHHHHHhcCC
Q 003103 17 VDLERIPIEEVFEQLKCS-REGLT-SDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFM-WNPLSWVMEAAAIMAIALANGG 92 (847)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~-~~GLs-~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~-~~~~~~~l~~~~il~~~~~~~~ 92 (847)
.+||.++.++++++|+++ .+||| ++|+++|+++||+|+++.++ +++|+.|+++| ++|++++|+++++++++++
T Consensus 2 ~~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g--- 78 (884)
T TIGR01522 2 KQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG--- 78 (884)
T ss_pred cchhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc---
Confidence 468999999999999998 56999 99999999999999999876 56788899999 9999999999999999976
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCeeccceE
Q 003103 93 GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADAR 172 (847)
Q Consensus 93 ~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ 172 (847)
.|.+++.++++++++..++++||+++++++++|+++.+++++|+|||++++|+++||||||+|.|++||+|||||+
T Consensus 79 ----~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ 154 (884)
T TIGR01522 79 ----NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLR 154 (884)
T ss_pred ----chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEE
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeCceEEEeccccCCCceeecCCCC--------------ccccceeeeeceEEEEEEeccchhHhhhHHHhhhccC-C
Q 003103 173 LLEGDPLKIDQSALTGESLPVTKNPYD--------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-Q 237 (847)
Q Consensus 173 ll~g~~~~Vdes~LTGEs~pv~K~~~~--------------~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~-~ 237 (847)
+++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|+++++|++||.+|.+|++.+++++.+ +
T Consensus 155 ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~ 234 (884)
T TIGR01522 155 IVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKP 234 (884)
T ss_pred EEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCC
Confidence 999977999999999999999998863 7999999999999999999999999999999988764 6
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceec
Q 003103 238 VGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 317 (847)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk 317 (847)
++++++.++++++++....++.+++.+++.| ..+.++..++..++++++++|||+||++++++++.+++||+++|+++|
T Consensus 235 kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk 313 (884)
T TIGR01522 235 KTPLQKSMDLLGKQLSLVSFGVIGVICLVGW-FQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVR 313 (884)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCccc
Confidence 7899999999998755433222222222223 345678889999999999999999999999999999999999999999
Q ss_pred cchhhhhcCCeEEEEecCCCccccCceEEEEEeeeec-c---c--CC-------------------ChHHHHHHHHHhcc
Q 003103 318 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF-A---K--GV-------------------EKEHVILLAARASR 372 (847)
Q Consensus 318 ~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~-~---~--~~-------------------~~~~~l~~~~~~~~ 372 (847)
+++++|+||++|++|||||||||+|+|+|.+++.... . . +. ...+++..++.|+.
T Consensus 314 ~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 393 (884)
T TIGR01522 314 KLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNN 393 (884)
T ss_pred chHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCC
Confidence 9999999999999999999999999999998764210 0 0 00 01244555555543
Q ss_pred cc--------CcchHHHHHHHhcCC--hHHHhccceEEEeecCCCCCcceEEEEEcC-CCcEEEEEcCcHHHHHHhcCC-
Q 003103 373 TE--------NQDAIDAAIVGMLAD--PKEARAGVREVHFLPFNPVDKRTALTYIDS-DGNWHRASKGAPEQILALCNC- 440 (847)
Q Consensus 373 ~~--------~~~~~~~ai~~~~~~--~~~~~~~~~~~~~~pf~s~~k~~~v~~~~~-~g~~~~~~KGa~e~i~~~~~~- 440 (847)
.. .+||+|.|++.++.. ....+..++.++++||+|.+|||+++++.. ++++++++|||||.++.+|+.
T Consensus 394 ~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~ 473 (884)
T TIGR01522 394 AKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYY 473 (884)
T ss_pred CeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhh
Confidence 21 247999999988642 222344678899999999999999988753 567899999999999999963
Q ss_pred ----------ChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCC
Q 003103 441 ----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV 510 (847)
Q Consensus 441 ----------~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI 510 (847)
+++.++.+.+.+++++++|+|++++||+++ +.+|+|+|+++++||+|||++++|++||++|+
T Consensus 474 ~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi 545 (884)
T TIGR01522 474 QKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGV 545 (884)
T ss_pred hhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCC
Confidence 134456778888999999999999999975 46799999999999999999999999999999
Q ss_pred eEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEE
Q 003103 511 NVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGM 590 (847)
Q Consensus 511 ~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~m 590 (847)
+++|+|||++.||.++|+++||.... ...+.|.+ .+.++++++++.+++..||||++|+||.++|+.+|++|++|+|
T Consensus 546 ~v~miTGD~~~tA~~ia~~~Gi~~~~--~~~v~g~~-l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~m 622 (884)
T TIGR01522 546 RIIMITGDSQETAVSIARRLGMPSKT--SQSVSGEK-LDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAM 622 (884)
T ss_pred eEEEECCCCHHHHHHHHHHcCCCCCC--CceeEhHH-hHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEE
Confidence 99999999999999999999997532 22344433 3467888999999999999999999999999999999999999
Q ss_pred EcCCcCChhhhhhcCcceecc-cccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 003103 591 TGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI- 668 (847)
Q Consensus 591 iGDG~ND~~aLk~AdVGIamg-~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~- 668 (847)
+|||+||+|||++|||||||| +|+|+|+++||+++++|||++|++++++||++|+|+++++.|.++.|+..+..++.+
T Consensus 623 vGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~ 702 (884)
T TIGR01522 623 TGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALAT 702 (884)
T ss_pred ECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 999999999999999999999 799999999999999999999999999999999999999999999999776655444
Q ss_pred HHhhcCCccHHHHHHHHHHhhhh-hcccccCCCCCC---CCCC----cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 003103 669 ALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQPD----SWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTD 740 (847)
Q Consensus 669 ~~~~~~~~~~~~~l~~~l~~~~~-~~~l~~~~~~~~---~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 740 (847)
++..+.|++|+|++|+|+++|++ ++++++|++++. ++|+ +...+.++..+++.|++++++.++.|++.+..
T Consensus 703 ~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~- 781 (884)
T TIGR01522 703 LMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD- 781 (884)
T ss_pred HHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC-
Confidence 44466799999999999999987 689999887653 2222 22235677788888999888877766654310
Q ss_pred cccccccccccCCChhHHHHHHHHHHHHHHHHHhhhhccCCCCccc---cchHHHHHHHHHHHHHHHHhhhccccccccc
Q 003103 741 FFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE---RPGLLLATAFVIAQLVRVHFHLTNLNTTIHM 817 (847)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (847)
+ ....+.+|+.|.+++++|++|.+++|+++.++++ ..|++++.++++..++ .++.+|.+.....|
T Consensus 782 ------~-----~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~~~~~p~~~~~f 849 (884)
T TIGR01522 782 ------G-----VITARDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIG-QLLVIYFPPLQSVF 849 (884)
T ss_pred ------C-----cchhhHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 0 0124567999999999999999999997755443 2456777777766665 44445544445678
Q ss_pred cccccChhhHHHHHHHHhh--hHHHHHHhhc
Q 003103 818 GSSFVSVHDFSWYLFIETS--SLSEMMHLFQ 846 (847)
Q Consensus 818 ~~~~~~~~~~~~~l~i~~~--~f~~~~~~~~ 846 (847)
++.++++.+|.+++++++. .++|.+|++.
T Consensus 850 ~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~ 880 (884)
T TIGR01522 850 QTEALSIKDLLFLLLITSSVCIVDEIRKKVE 880 (884)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888777665 4899999864
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-125 Score=1159.90 Aligned_cols=816 Identities=21% Similarity=0.335 Sum_probs=661.0
Q ss_pred CHHHHHHHcCCC-CCCCC--HHHHHHHHhhcCCCccCcccc-chHHHHHHHHHhHHHHHHHHHHHHHHHHhcC------C
Q 003103 23 PIEEVFEQLKCS-REGLT--SDEGAHRLHVFGPNKLEEKKE-SKVLKFLGFMWNPLSWVMEAAAIMAIALANG------G 92 (847)
Q Consensus 23 ~~~~~~~~l~~~-~~GLs--~~e~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~------~ 92 (847)
..++++++|+++ .+||| ++||++|+++||+|+++.+++ ++|+.|+++|++|++++|+++++++++++.. .
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 578899999998 56999 999999999999999998876 5678889999999999999999999987621 2
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCeeccce
Q 003103 93 GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMAN-LAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADA 171 (847)
Q Consensus 93 ~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~-~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~ 171 (847)
+...+|+++++++++++++.++++++|++++++.+++++. .+++++|+|||++++|+++||||||+|.|++||+|||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 202 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 202 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccE
Confidence 2334799999999999999999999999999999999764 478999999999999999999999999999999999999
Q ss_pred EEEeeCceEEEeccccCCCceeecCCCCc--cccceeeeeceEEEEEEeccchhHhhhHHHhhhccCCCCchHHHHHHHH
Q 003103 172 RLLEGDPLKIDQSALTGESLPVTKNPYDE--VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 249 (847)
Q Consensus 172 ~ll~g~~~~Vdes~LTGEs~pv~K~~~~~--v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~~~ 249 (847)
+|++|+.+.||||+|||||.|+.|.+++. +|+||.|.+|++.++|++||.+|++||+.++++++++++++++.++++.
T Consensus 203 ~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~ 282 (941)
T TIGR01517 203 VFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSELA 282 (941)
T ss_pred EEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHH
Confidence 99999789999999999999999998765 9999999999999999999999999999999887777789999999888
Q ss_pred HHHHHHHHHHHHHHHHh---hhhcc---c---------cchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCc
Q 003103 250 NFCICSIAVGIVAEIII---MYPVQ---H---------RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 314 (847)
Q Consensus 250 ~~~~~~i~~~~~~~~~~---~~~~~---~---------~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~i 314 (847)
+++...+++..++.+++ .+... + .++.+.+..++++++++|||+||++++++++.++.+|+|+|+
T Consensus 283 ~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~i 362 (941)
T TIGR01517 283 GLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNN 362 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCC
Confidence 77543322211111111 11111 1 246677888999999999999999999999999999999999
Q ss_pred eeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecc---cC----CC--hHHHHHHHHHhccc------------
Q 003103 315 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA---KG----VE--KEHVILLAARASRT------------ 373 (847)
Q Consensus 315 lvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~---~~----~~--~~~~l~~~~~~~~~------------ 373 (847)
++|+++++|+||++|++|||||||||+|+|++.+++..... .+ .+ ..+++..++.++..
T Consensus 363 lvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~ 442 (941)
T TIGR01517 363 LVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRA 442 (941)
T ss_pred EEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccc
Confidence 99999999999999999999999999999999987642110 00 00 12233333333211
Q ss_pred cCcchHHHHHHHhcC----ChHHHhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCCC--------
Q 003103 374 ENQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-------- 441 (847)
Q Consensus 374 ~~~~~~~~ai~~~~~----~~~~~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~-------- 441 (847)
..+||+|.|++.++. +..+.+..++.++.+||+|++|||+++++..++++++++|||||.++++|+..
T Consensus 443 ~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~ 522 (941)
T TIGR01517 443 FIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEAT 522 (941)
T ss_pred cCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcc
Confidence 125799999998763 33333455677889999999999999998766778999999999999999631
Q ss_pred --hHHHHHHHHHHHHHHHccCeEEEEEeeecCCCC---CCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEc
Q 003103 442 --EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT---KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMIT 516 (847)
Q Consensus 442 --~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~---~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miT 516 (847)
.+.++++.+.+++++++|+|++++||++++.++ .+..|++|+|+|+++++||+|+|++++|++||++||+++|+|
T Consensus 523 ~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miT 602 (941)
T TIGR01517 523 PISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVT 602 (941)
T ss_pred cCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEEC
Confidence 023567888899999999999999999886433 233478999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcC
Q 003103 517 GDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVN 596 (847)
Q Consensus 517 GD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~N 596 (847)
|||+.||.++|+++||.++ +...+.|.+ ...++++++++++++..||||++|+||.++|+.||++|++|+|||||+|
T Consensus 603 GD~~~tA~~iA~~~GI~~~--~~~vi~G~~-~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvN 679 (941)
T TIGR01517 603 GDNIDTAKAIARNCGILTF--GGLAMEGKE-FRRLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTN 679 (941)
T ss_pred CCChHHHHHHHHHcCCCCC--CceEeeHHH-hhhCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 9999999999999999743 123444443 3467788999999999999999999999999999999999999999999
Q ss_pred ChhhhhhcCcceecc-cccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhcC
Q 003103 597 DAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI-ALIWKF 674 (847)
Q Consensus 597 D~~aLk~AdVGIamg-~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~-~~~~~~ 674 (847)
|+||||+|||||||| +|+|+|+++||++|++|+|++|++++++||++|+|+++++.|.+++|+..++..+++ +++.+.
T Consensus 680 DapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~ 759 (941)
T TIGR01517 680 DAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTS 759 (941)
T ss_pred hHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999 999999999999999999999999999999999999999999999999766655554 444667
Q ss_pred CccHHHHHHHHHHhhhh-hcccccCCCCCC---CCCCcc----cHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Q 003103 675 DFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQPDSW----KLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAF 746 (847)
Q Consensus 675 ~~~~~~~l~~~l~~~~~-~~~l~~~~~~~~---~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 746 (847)
|++|+|++|+|+++|.+ ++++++|++++. ++|++| ..+.++..++.+|++++++.++.|++... ++....
T Consensus 760 pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~ 837 (941)
T TIGR01517 760 PLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGS--IFDVSG 837 (941)
T ss_pred cHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhcccC
Confidence 99999999999999975 799999887654 233332 23567777888899999888877665431 221000
Q ss_pred cccccCCChhHHHHHHHHHHHHHHHHHhhhhccCCC-Ccccc--chHHHHHHHHHHHHHHHHhhhccccccccccccccC
Q 003103 747 GVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSW-SFIER--PGLLLATAFVIAQLVRVHFHLTNLNTTIHMGSSFVS 823 (847)
Q Consensus 747 ~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~-~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 823 (847)
+.........+.+|+.|.+++++|+++.+++|+.+. .+++. .|++++.++++..++. ++..++. ..+|++.+++
T Consensus 838 ~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~-~~~~~~~--~~~f~~~~l~ 914 (941)
T TIGR01517 838 PDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQ-VIIVEFG--GSFFSTVSLS 914 (941)
T ss_pred cccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHH-HHHHHHH--HHHhcccCCC
Confidence 000000123567899999999999999999999653 22211 2446666555554543 3333332 4468889999
Q ss_pred hhhHHHHHHHHhh--hHHHHHHhhc
Q 003103 824 VHDFSWYLFIETS--SLSEMMHLFQ 846 (847)
Q Consensus 824 ~~~~~~~l~i~~~--~f~~~~~~~~ 846 (847)
+..|.++++++.. .+.|..|.+.
T Consensus 915 ~~~w~~~~~~~~~~~~~~~~~~~~~ 939 (941)
T TIGR01517 915 IEQWIGCVLLGMLSLIFGVLLRLIP 939 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999998777665 5777776653
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-129 Score=1075.84 Aligned_cols=803 Identities=23% Similarity=0.362 Sum_probs=642.4
Q ss_pred HHHHHHHcCCC-CCCCCH--HHHHHHHhhcCCCccCccccch-HHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCCCCCch
Q 003103 24 IEEVFEQLKCS-REGLTS--DEGAHRLHVFGPNKLEEKKESK-VLKFLGFMWNPLSWVMEAAAIMAIALAN-GGGRDPDW 98 (847)
Q Consensus 24 ~~~~~~~l~~~-~~GLs~--~e~~~r~~~~G~N~i~~~~~~~-~~~~~~~~~~~~~~~l~~~~il~~~~~~-~~~~~~~~ 98 (847)
.+.++++|+++ .+||+. +|..+|++.||.|.+|+++++. |+..++.+.+.-.++|.++|++|+.+++ ..+....|
T Consensus 103 v~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW 182 (1034)
T KOG0204|consen 103 VEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGW 182 (1034)
T ss_pred HHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCccc
Confidence 68899999998 569987 8999999999999999988655 5555899999999999999999999886 34556699
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEeeC
Q 003103 99 QDFVGIIVLLVINSTISFIEENNAGNAAAALMA-NLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGD 177 (847)
Q Consensus 99 ~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~-~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~ 177 (847)
++++.|++.+++..++....+|+.++..+.|.+ ....+..|+|||+.++|+..|||||||+.|+.||.|||||++++|+
T Consensus 183 ~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn 262 (1034)
T KOG0204|consen 183 IEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGN 262 (1034)
T ss_pred ccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEecc
Confidence 999988766544444444444444444444432 3466889999999999999999999999999999999999999999
Q ss_pred ceEEEeccccCCCceeecCC--CCccccceeeeeceEEEEEEeccchhHhhhHHHhhhccC-CCCchHHHHHHHHHHH--
Q 003103 178 PLKIDQSALTGESLPVTKNP--YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFC-- 252 (847)
Q Consensus 178 ~~~Vdes~LTGEs~pv~K~~--~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~-- 252 (847)
++.+|||++||||++++|.+ ...+++||++.+|.++++|+++|.+|..|++..++.... +++|+|-.+++++..+
T Consensus 263 ~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk 342 (1034)
T KOG0204|consen 263 SLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGK 342 (1034)
T ss_pred ceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHH
Confidence 99999999999999999987 457899999999999999999999999999999888775 8899998888776542
Q ss_pred -HHHHHHHHHHHHHhhhhcc-----cc---c--------hHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCce
Q 003103 253 -ICSIAVGIVAEIIIMYPVQ-----HR---K--------YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 315 (847)
Q Consensus 253 -~~~i~~~~~~~~~~~~~~~-----~~---~--------~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~il 315 (847)
...++...++.++..|+.. +. . +...+..++.++++++|+|||++++++++++++||.+.+.+
T Consensus 343 ~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~L 422 (1034)
T KOG0204|consen 343 IGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNL 422 (1034)
T ss_pred HHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchhH
Confidence 1111121222222233221 11 1 11233344566778999999999999999999999999999
Q ss_pred eccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccC--------CChH--HHHHHH-HHhcc------------
Q 003103 316 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG--------VEKE--HVILLA-ARASR------------ 372 (847)
Q Consensus 316 vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~--------~~~~--~~l~~~-~~~~~------------ 372 (847)
+|+++++|++|+.++||+|||||||+|+|+|.+.++....+. .++. +++..+ +..+.
T Consensus 423 VRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~ 502 (1034)
T KOG0204|consen 423 VRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQ 502 (1034)
T ss_pred HHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCcC
Confidence 999999999999999999999999999999998765321111 1111 112111 11111
Q ss_pred -ccCcchHHHHHHHhc----CChHHHhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCC-------
Q 003103 373 -TENQDAIDAAIVGML----ADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC------- 440 (847)
Q Consensus 373 -~~~~~~~~~ai~~~~----~~~~~~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~------- 440 (847)
...++|.|.|++++. .+.++.+...+.++.+||+|.+|+|+++++.++|..++++|||+|.+++.|+.
T Consensus 503 ~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~ 582 (1034)
T KOG0204|consen 503 PEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGE 582 (1034)
T ss_pred ccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCC
Confidence 012489999999875 46667788888999999999999999999977776349999999999999974
Q ss_pred ----ChHHHHHHHHHHHHHHHccCeEEEEEeeecCCC-------C-CCCCCCCceEEEEecccCCCCcchHHHHHHHHhC
Q 003103 441 ----REDVRKKVHAVIDKFAERGLRSLGVARQEIPEK-------T-KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNL 508 (847)
Q Consensus 441 ----~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~-------~-~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~a 508 (847)
+++.++.+.+.++.|+.+|+|++++||++..+. + .+..+.+|+++|+++++||+|||++++|+.|++|
T Consensus 583 ~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~A 662 (1034)
T KOG0204|consen 583 LVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRA 662 (1034)
T ss_pred EeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHc
Confidence 345566889999999999999999999984322 1 2456789999999999999999999999999999
Q ss_pred CCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEE
Q 003103 509 GVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHIC 588 (847)
Q Consensus 509 GI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V 588 (847)
||+|.|+||||..||++||.+|||.++..+...+.| .+...+++++++++..+.+|+||.+|.||.-+|+.|+++|++|
T Consensus 663 GItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG-~eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VV 741 (1034)
T KOG0204|consen 663 GITVRMVTGDNINTAKAIARECGILTPGGDFLALEG-KEFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVV 741 (1034)
T ss_pred CcEEEEEeCCcHHHHHHHHHHcccccCCCccceecc-hhhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEE
Confidence 999999999999999999999999875443334444 4455889999999999999999999999999999999999999
Q ss_pred EEEcCCcCChhhhhhcCcceecc-cccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Q 003103 589 GMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI-RIVLGFM 666 (847)
Q Consensus 589 ~miGDG~ND~~aLk~AdVGIamg-~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~-~~~~~~~ 666 (847)
|++|||+||+||||+||||.||| .||++|||+||+||+||||++|++++.|||..|+||+|+++|+++.|+ ++++.+.
T Consensus 742 AVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv 821 (1034)
T KOG0204|consen 742 AVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFV 821 (1034)
T ss_pred EEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhh
Confidence 99999999999999999999999 999999999999999999999999999999999999999999999998 4555555
Q ss_pred HHHHhhcCCccHHHHHHHHHHhhhh-hcccccCCCCCC---C----CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003103 667 LIALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---P----QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRK 738 (847)
Q Consensus 667 ~~~~~~~~~~~~~~~l~~~l~~~~~-~~~l~~~~~~~~---~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 738 (847)
.+......|+++.|+||+|+++|.+ +++|+.|++.+. + |..+...+.+|+.++.+++|+.++.|.+.+....
T Consensus 822 ~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~ 901 (1034)
T KOG0204|consen 822 SACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGKS 901 (1034)
T ss_pred hhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 5555666899999999999999987 799999998653 2 2344456789999999999999888866555431
Q ss_pred cccccccccccccCCChhHHHHHHHHHHHHHHHHHhhhhccCC-CC----ccccchHHHHHHHHHHHHHHHHhhhccccc
Q 003103 739 TDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRS-WS----FIERPGLLLATAFVIAQLVRVHFHLTNLNT 813 (847)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~-~~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 813 (847)
.|..+ + +.+..+.+..|+.|.+++++|.||-+++|+.. .. .++|+ ++.+++...++..++.+.+.+.
T Consensus 902 --if~~~-~--~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~---~F~~ii~~T~v~QviIveF~g~ 973 (1034)
T KOG0204|consen 902 --IFGLN-G--PLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNR---LFCVIITITVVSQVIIVEFGGA 973 (1034)
T ss_pred --hhccC-C--CCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCc---eEEEEeeeeeehhhhhhhhcCc
Confidence 22211 1 12223445569999999999999999999955 22 23343 3333333333334444444333
Q ss_pred cccccccccChhhHHHHHHHHhhh
Q 003103 814 TIHMGSSFVSVHDFSWYLFIETSS 837 (847)
Q Consensus 814 ~~~~~~~~~~~~~~~~~l~i~~~~ 837 (847)
. |.+.++++..|.+|+++++.+
T Consensus 974 ~--~st~~L~~~qWl~ci~~g~~s 995 (1034)
T KOG0204|consen 974 F--FSTTPLSLTQWLWCIFIGVLS 995 (1034)
T ss_pred c--eeeecccHHHHHHHHHHHHHH
Confidence 3 888999999999999999765
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-117 Score=1079.65 Aligned_cols=778 Identities=27% Similarity=0.375 Sum_probs=626.8
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHhcCC---CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEC
Q 003103 66 FLGFMWNPLSWVMEAAAIMAIALANGG---GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD 142 (847)
Q Consensus 66 ~~~~~~~~~~~~l~~~~il~~~~~~~~---~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rd 142 (847)
+++||++|++++|+++++++++++... ....+|.++++|++++++++.++++||+|+++++++|+++.+++++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 468999999999999999999986321 22358999999999999999999999999999999999999999999999
Q ss_pred CeEEEEeCCCCCCCcEEEEcCCCeeccceEEEeeCceEEEeccccCCCceeecCCC-------------Cccccceeeee
Q 003103 143 GRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY-------------DEVFSGSTCKQ 209 (847)
Q Consensus 143 g~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~-------------~~v~~Gt~v~~ 209 (847)
|++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.|+.|.++ |++|+||.+.+
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~ 160 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVA 160 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEec
Confidence 99999999999999999999999999999999997799999999999999999875 78999999999
Q ss_pred ceEEEEEEeccchhHhhhHHHhhhccC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhh-c----cccch----HhHH
Q 003103 210 GEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYP-V----QHRKY----RDGI 279 (847)
Q Consensus 210 G~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~----~~~~~----~~~~ 279 (847)
|++.++|++||.+|++||+.+.++.++ +++++|+.+++++..+...+++.+++.+++... + .+.+| ...+
T Consensus 161 G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (917)
T TIGR01116 161 GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYF 240 (917)
T ss_pred ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHH
Confidence 999999999999999999999887764 689999999998877544333222222221111 0 11122 2344
Q ss_pred HHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeec-----
Q 003103 280 DNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF----- 354 (847)
Q Consensus 280 ~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~----- 354 (847)
..++++++++||++||++++++++.+++||+++|+++|+++++|+||++|++|||||||||+|+|++.+++....
T Consensus 241 ~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 320 (917)
T TIGR01116 241 KIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL 320 (917)
T ss_pred HHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc
Confidence 566788999999999999999999999999999999999999999999999999999999999999998764210
Q ss_pred ------ccCCC-------------------hHHHHHHHHHhcccc------------CcchHHHHHHHhcCCh----H--
Q 003103 355 ------AKGVE-------------------KEHVILLAARASRTE------------NQDAIDAAIVGMLADP----K-- 391 (847)
Q Consensus 355 ------~~~~~-------------------~~~~l~~~~~~~~~~------------~~~~~~~ai~~~~~~~----~-- 391 (847)
..+++ .+.++..++.|+... .++|.|.|++.++.+. .
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~ 400 (917)
T TIGR01116 321 NEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKN 400 (917)
T ss_pred ceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhc
Confidence 00000 123444555555321 2589999998764211 0
Q ss_pred --------------HHhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCC-----------ChHHHH
Q 003103 392 --------------EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC-----------REDVRK 446 (847)
Q Consensus 392 --------------~~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~-----------~~~~~~ 446 (847)
..++.++.++.+||+|+||||++++++ ++++++++|||||.|+++|+. +++.++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~ 479 (917)
T TIGR01116 401 GVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKN 479 (917)
T ss_pred ccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHH
Confidence 123457789999999999999999875 467899999999999999963 234567
Q ss_pred HHHHHHHHHHH-ccCeEEEEEeeecCCCC----------CCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEE
Q 003103 447 KVHAVIDKFAE-RGLRSLGVARQEIPEKT----------KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMI 515 (847)
Q Consensus 447 ~~~~~~~~~~~-~G~rvl~~a~~~~~~~~----------~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~mi 515 (847)
++.+.+++|++ +|+||+++|||.++.+. .+..|++|+|+|+++++||||+|++++|++||++||+++|+
T Consensus 480 ~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~mi 559 (917)
T TIGR01116 480 TILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMI 559 (917)
T ss_pred HHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEe
Confidence 78889999999 99999999999986421 13468899999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCCCCCCC--CCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcC
Q 003103 516 TGDQLAIGKETGRRLGMGTNMYP--SSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGD 593 (847)
Q Consensus 516 TGD~~~tA~~iA~~~Gi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGD 593 (847)
|||++.||.++|+++|+..+..+ ...+.|.+ .+.+++++..+...+..||||++|+||.++|+.+|+.|++|+|+||
T Consensus 560 TGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~-l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGD 638 (917)
T TIGR01116 560 TGDNKETAEAICRRIGIFSPDEDVTFKSFTGRE-FDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGD 638 (917)
T ss_pred cCCCHHHHHHHHHHcCCCCCCccccceeeeHHH-HhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecC
Confidence 99999999999999999643211 11233333 3456677788888888999999999999999999999999999999
Q ss_pred CcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh
Q 003103 594 GVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA-LIW 672 (847)
Q Consensus 594 G~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~-~~~ 672 (847)
|+||+||||+||||||||+|+++|+++||+++.+|||++|++++++||++|+|+++++.|.++.|+..++..+++. +.+
T Consensus 639 G~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~ 718 (917)
T TIGR01116 639 GVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGI 718 (917)
T ss_pred CcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999998777666654 345
Q ss_pred cCCccHHHHHHHHHHhhhh-hcccccCCCCCC---CCC----CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccc
Q 003103 673 KFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQP----DSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKT-DFFS 743 (847)
Q Consensus 673 ~~~~~~~~~l~~~l~~~~~-~~~l~~~~~~~~---~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~ 743 (847)
+.|++|+|++|+|+++|.+ ++++++++++++ .+| ++...++++..+++.|+++++++++.|++.... ++..
T Consensus 719 ~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 798 (917)
T TIGR01116 719 PEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTG 798 (917)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 6799999999999999964 788988887653 122 122235677777888999998877666554321 2211
Q ss_pred ccc----cccc---c----CCChhHHHHHHHHHHHHHHHHHhhhhccCCCCccc---cchHHHHHHHHHHHHHHHHhhhc
Q 003103 744 DAF----GVRS---L----RTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE---RPGLLLATAFVIAQLVRVHFHLT 809 (847)
Q Consensus 744 ~~~----~~~~---~----~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~ 809 (847)
... +..+ . .....+++|+.|.+++++|++|.|++|+++.++++ .+|++++.+++++.++ +++..|
T Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l-~~~~~~ 877 (917)
T TIGR01116 799 CDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMAL-HFLILY 877 (917)
T ss_pred ccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHH-HHHHHH
Confidence 000 0000 0 00234578999999999999999999997755433 2355777777766555 444445
Q ss_pred cccccccccccccChhhHHHHHHHHhh--hHHHHHHhhc
Q 003103 810 NLNTTIHMGSSFVSVHDFSWYLFIETS--SLSEMMHLFQ 846 (847)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~l~i~~~--~f~~~~~~~~ 846 (847)
.+....+|++.++++.+|.+++++.+. .++|.+|++.
T Consensus 878 v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~ 916 (917)
T TIGR01116 878 VPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFS 916 (917)
T ss_pred hHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 544556789999999999988777655 4899999874
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-116 Score=1087.91 Aligned_cols=781 Identities=21% Similarity=0.251 Sum_probs=616.2
Q ss_pred CCCCCHHHHHHHHhhcCCCccCccccchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHH
Q 003103 35 REGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTI 114 (847)
Q Consensus 35 ~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~ 114 (847)
.+|||++|+++|+++||+|+++.+++++|+.|++++++||+++++++++++++. .+|+++++++++++++..+
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~-------~~~~~~~~i~~i~~~~~~~ 209 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVILWLLD-------EYYYYSLCIVFMSSTSISL 209 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCCCCHHHHHHHHHhchHHHHHHHHHHHHHhh-------hhHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999998888889999999999988887776665542 3788999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEc--CCCeeccceEEEeeCceEEEeccccCCCce
Q 003103 115 SFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIK--LGDIVPADARLLEGDPLKIDQSALTGESLP 192 (847)
Q Consensus 115 ~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~--~G~~vPaD~~ll~g~~~~Vdes~LTGEs~p 192 (847)
++++++|+.++++++.. .++.++|+|||+|++|+++||||||+|.|+ +|++|||||+|++| ++.||||+|||||.|
T Consensus 210 ~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g-~~~VdES~LTGES~P 287 (1054)
T TIGR01657 210 SVYQIRKQMQRLRDMVH-KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSG-SCIVNESMLTGESVP 287 (1054)
T ss_pred HHHHHHHHHHHHHHhhc-CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeC-cEEEecccccCCccc
Confidence 99999999998888654 568999999999999999999999999999 99999999999999 699999999999999
Q ss_pred eecCCC------------------Cccccceeeee-------ceEEEEEEeccchhHhhhHHHhhhccC-CCCchHHHHH
Q 003103 193 VTKNPY------------------DEVFSGSTCKQ-------GEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLT 246 (847)
Q Consensus 193 v~K~~~------------------~~v~~Gt~v~~-------G~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~ 246 (847)
+.|.+. +++|+||.|.+ |.+.++|++||.+|..|++.+.+..++ ..+++++...
T Consensus 288 v~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~ 367 (1054)
T TIGR01657 288 VLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSF 367 (1054)
T ss_pred eecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHH
Confidence 999762 25999999985 789999999999999999999887654 5577888777
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceeccchhhhhcC
Q 003103 247 AIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 326 (847)
Q Consensus 247 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg 326 (847)
++..+++++.++++++ +++.....+.++...+..++.++++++|++||++++++++.|+.||+|+|++||+++++|++|
T Consensus 368 ~~~~~l~~~a~i~~i~-~~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG 446 (1054)
T TIGR01657 368 KFILFLAVLALIGFIY-TIIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAG 446 (1054)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecc
Confidence 7665543332222222 111222345678889999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEecCCCccccCceEEEEEeeeecccC----------CChHHHHHHHHHhccc------cCcchHHHHHHHhcCCh
Q 003103 327 GMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG----------VEKEHVILLAARASRT------ENQDAIDAAIVGMLADP 390 (847)
Q Consensus 327 ~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~----------~~~~~~l~~~~~~~~~------~~~~~~~~ai~~~~~~~ 390 (847)
++|++|||||||||+|+|+|.++........ .....+....+.|+.. ..+||+|.|++++.+..
T Consensus 447 ~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~ 526 (1054)
T TIGR01657 447 KIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWT 526 (1054)
T ss_pred eeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCE
Confidence 9999999999999999999998764211000 0112233334444321 23699999999875311
Q ss_pred ----HH--H-------------hccceEEEeecCCCCCcceEEEEEcCC-CcEEEEEcCcHHHHHHhcCCChHHHHHHHH
Q 003103 391 ----KE--A-------------RAGVREVHFLPFNPVDKRTALTYIDSD-GNWHRASKGAPEQILALCNCREDVRKKVHA 450 (847)
Q Consensus 391 ----~~--~-------------~~~~~~~~~~pf~s~~k~~~v~~~~~~-g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~ 450 (847)
.+ . ...+++++.+||+|++|||+++++..+ +++++++|||||.|+++|+. ++.++++++
T Consensus 527 ~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~-~~~p~~~~~ 605 (1054)
T TIGR01657 527 LEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP-ETVPSDYQE 605 (1054)
T ss_pred EECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCC-cCCChhHHH
Confidence 00 0 145778899999999999999998643 56789999999999999984 345778899
Q ss_pred HHHHHHHccCeEEEEEeeecCCC--------CCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHH
Q 003103 451 VIDKFAERGLRSLGVARQEIPEK--------TKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI 522 (847)
Q Consensus 451 ~~~~~~~~G~rvl~~a~~~~~~~--------~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~t 522 (847)
.+++++++|+||+++|||++++. ++++.|+||+|+|+++|+||+|||++++|++||++||+++|+||||+.|
T Consensus 606 ~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~T 685 (1054)
T TIGR01657 606 VLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685 (1054)
T ss_pred HHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 99999999999999999998632 2356789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCC-------------CC--------------------------------------cccCcccc--c
Q 003103 523 GKETGRRLGMGTNMYP-------------SS--------------------------------------SLLGQDKD--A 549 (847)
Q Consensus 523 A~~iA~~~Gi~~~~~~-------------~~--------------------------------------~~~~~~~~--~ 549 (847)
|.++|+++||.++... .. .++|...+ .
T Consensus 686 A~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~ 765 (1054)
T TIGR01657 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQ 765 (1054)
T ss_pred HHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHH
Confidence 9999999999643210 00 00111100 0
Q ss_pred cCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCC
Q 003103 550 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629 (847)
Q Consensus 550 ~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~ 629 (847)
.++++++++++.++.||||++|+||.++|+.||+.|++|+|||||+||+||||+||||||||++ |++ .|||+++.+++
T Consensus 766 ~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-das-~AA~f~l~~~~ 843 (1054)
T TIGR01657 766 AHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-EAS-VAAPFTSKLAS 843 (1054)
T ss_pred HhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-cce-eecccccCCCc
Confidence 1234567778889999999999999999999999999999999999999999999999999964 544 79999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHhhhh-hcccccCCCCCC---CC
Q 003103 630 LSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQ 705 (847)
Q Consensus 630 ~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~l~~~~~~~~---~~ 705 (847)
|++|+++|++||+++.|+++.+.|.+.+++..+..++. ....+.+++++|++|+|++++.+ +++++.+++.+. .+
T Consensus 844 ~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~ 922 (1054)
T TIGR01657 844 ISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI-LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKER 922 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCC
Confidence 99999999999999999999999999998866554433 33456899999999999999976 788888887653 22
Q ss_pred C-CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccc-cCCChhHHHHHHHHHHHHHHHHHhhhhccCCCC
Q 003103 706 P-DSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRS-LRTRPDEMMAALYLQVSIISQALIFVTRSRSWS 783 (847)
Q Consensus 706 ~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~ 783 (847)
| .+...+..+...+.+++++.++.+..|++....+|+........ -.......+|+.| .++.++++..+.+++.+.+
T Consensus 923 P~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~g~p 1001 (1054)
T TIGR01657 923 PPSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSKGPP 1001 (1054)
T ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcCCcc
Confidence 3 33334566777778888888888887777766666532111100 0112234568888 6677888888888887654
Q ss_pred cccc--chHHHHHHHHHHHHHHHHhhh-ccccccccccccccChhhHHHHH
Q 003103 784 FIER--PGLLLATAFVIAQLVRVHFHL-TNLNTTIHMGSSFVSVHDFSWYL 831 (847)
Q Consensus 784 ~~~~--~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l 831 (847)
+... .|.+++.++++..++..++.+ +.+.....|++.+++. .|.+.+
T Consensus 1002 f~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~l 1051 (1054)
T TIGR01657 1002 FREPIYKNKPFVYLLITGLGLLLVLLLDPHPLLGKILQIVPLPQ-EFRSKL 1051 (1054)
T ss_pred hhhhHHHhHHHHHHHHHHHHHHHHhhhCCCHHHHhhheeeeCCH-HHHHHH
Confidence 4332 344666666655454443333 5555555677777775 354443
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-119 Score=995.89 Aligned_cols=840 Identities=24% Similarity=0.393 Sum_probs=690.6
Q ss_pred CCcccchhhhccc-CcccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHHHHhHHHHHHH
Q 003103 3 GDKAISLEEIKNE-SVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVME 79 (847)
Q Consensus 3 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~ 79 (847)
.+|.+++++.|++ ..+.|++|.+|+.++++++ .+|||.+++.+++.+.|+|.+++|+ .+.|.+|++|+++.+.++++
T Consensus 22 ~~~~~~l~~~k~e~~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~ 101 (1019)
T KOG0203|consen 22 KKKKKELDDLKKEVSMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLW 101 (1019)
T ss_pred cchhhhHHHHhhheeeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHH
Confidence 4567788888888 5889999999999999999 7899999999999999999998877 45699999999999999999
Q ss_pred HHHHHHHHHhc---C---CCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCC
Q 003103 80 AAAIMAIALAN---G---GGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASIL 153 (847)
Q Consensus 80 ~~~il~~~~~~---~---~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~L 153 (847)
++++++++... . .....+.+-+.++..++++..+..++||.+..+.+++++++.|+.++|+|||+...+..+||
T Consensus 102 ~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eel 181 (1019)
T KOG0203|consen 102 IGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEEL 181 (1019)
T ss_pred HHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhc
Confidence 99999988432 1 11123445555566677888889999999999999999999999999999999999999999
Q ss_pred CCCcEEEEcCCCeeccceEEEeeCceEEEeccccCCCceeecCCC----------CccccceeeeeceEEEEEEeccchh
Q 003103 154 VPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY----------DEVFSGSTCKQGEIEAVVIATGVHT 223 (847)
Q Consensus 154 v~GDiV~l~~G~~vPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~----------~~v~~Gt~v~~G~~~~~V~~tG~~T 223 (847)
||||+|.++-||+||||.+++++..++||+|+|||||+|..+.+. |+.|.+|.+++|.++++|++||.+|
T Consensus 182 VvGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~T 261 (1019)
T KOG0203|consen 182 VVGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRT 261 (1019)
T ss_pred ccccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCce
Confidence 999999999999999999999999999999999999999998763 6789999999999999999999999
Q ss_pred HhhhHHHhhhc-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHH
Q 003103 224 FFGKAAHLVDS-TNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTM 302 (847)
Q Consensus 224 ~~g~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~ 302 (847)
.+|+|+.+... ...++++++.++.+..+......+ +.+.++......+..|..++.+.+.++++.+|+||+..++.++
T Consensus 262 v~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~-~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~L 340 (1019)
T KOG0203|consen 262 VMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIF-LGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCL 340 (1019)
T ss_pred EEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHH-HHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhH
Confidence 99999988765 357788888888877664322222 2222222333347788888888999999999999999999999
Q ss_pred HHHHHHhhcCCceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeeccc----------------CCChHHHHHH
Q 003103 303 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAK----------------GVEKEHVILL 366 (847)
Q Consensus 303 ~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~----------------~~~~~~~l~~ 366 (847)
...++||+++++++|+++++|+||+.++||+|||||||+|+|+|.+.+.+..-. ...-.++.++
T Consensus 341 tltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~ 420 (1019)
T KOG0203|consen 341 TLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRI 420 (1019)
T ss_pred HHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHH
Confidence 999999999999999999999999999999999999999999999877531100 1112345666
Q ss_pred HHHhccc---------------cCcchHHHHHHHhc----CChHHHhccceEEEeecCCCCCcceEEEEEcCC---CcEE
Q 003103 367 AARASRT---------------ENQDAIDAAIVGML----ADPKEARAGVREVHFLPFNPVDKRTALTYIDSD---GNWH 424 (847)
Q Consensus 367 ~~~~~~~---------------~~~~~~~~ai~~~~----~~~~~~~~~~~~~~~~pf~s~~k~~~v~~~~~~---g~~~ 424 (847)
+..|++. ..+|+.+.|++++. .+..+.++..+.+.++||+|.+|+.-.++...+ .++.
T Consensus 421 ~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~ 500 (1019)
T KOG0203|consen 421 ATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFL 500 (1019)
T ss_pred HHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccce
Confidence 6666542 23588999999885 345667888889999999999999988887544 5778
Q ss_pred EEEcCcHHHHHHhcCC----------ChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCC-----------CCCCCCce
Q 003103 425 RASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK-----------ESPGAPWQ 483 (847)
Q Consensus 425 ~~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~-----------~~~e~~l~ 483 (847)
+.+|||||.++++|+. ++...+.+++...++...|-||++++++.+++++. +....+|.
T Consensus 501 l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~ 580 (1019)
T KOG0203|consen 501 LVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLR 580 (1019)
T ss_pred eeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhcc
Confidence 8999999999999973 45677888999999999999999999999875431 23456799
Q ss_pred EEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC------------CC----------Cc
Q 003103 484 LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY------------PS----------SS 541 (847)
Q Consensus 484 ~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~------------~~----------~~ 541 (847)
|+|++++.||||..+|+++..||.|||||+|+||||+.||+++|+++||..... +. .+
T Consensus 581 FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~V 660 (1019)
T KOG0203|consen 581 FLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAV 660 (1019)
T ss_pred ccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEE
Confidence 999999999999999999999999999999999999999999999999754211 00 01
Q ss_pred ccCccccccCCcchHHHHHHhcC--eEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecc-cccHHHh
Q 003103 542 LLGQDKDASIAALPVDELIEKAD--GFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAAR 618 (847)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~~--v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg-~g~~~a~ 618 (847)
+.|. +...++.+++++++++.. ||||.||+||+.||+.+|++|.+|+++|||+||+||||+|||||||| .|+|++|
T Consensus 661 ihG~-eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsK 739 (1019)
T KOG0203|consen 661 IHGS-ELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSK 739 (1019)
T ss_pred Eecc-cccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHH
Confidence 2222 334678889999998765 99999999999999999999999999999999999999999999999 9999999
Q ss_pred hccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhcCCccHHHHHHHHHHhhhh-hcccc
Q 003103 619 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI-ALIWKFDFSPFMVLIIAILNDGT-IMTIS 696 (847)
Q Consensus 619 ~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~-~~~l~ 696 (847)
+|||+||+||||++|+..+++||-+|+|+||.+.|.+++|++.+..++.+ ++..|+|+.++++|.+.+.+|++ +++|+
T Consensus 740 qAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLA 819 (1019)
T KOG0203|consen 740 QAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLA 819 (1019)
T ss_pred hhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHh
Confidence 99999999999999999999999999999999999999999877766555 45688999999999999999985 89999
Q ss_pred cCCCCCC---CCC-----CcccHHHHHHHHH-HHHHHHHHHHHHHHHHHH-hccccccc-cc---------ccccCCC--
Q 003103 697 KDRVKPS---PQP-----DSWKLKEIFATGV-VLGSYLAIMTVVFFWLMR-KTDFFSDA-FG---------VRSLRTR-- 754 (847)
Q Consensus 697 ~~~~~~~---~~~-----~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~-~~~~~~~~-~~---------~~~~~~~-- 754 (847)
||.++.. ++| ++....+++.++. ..|+++++..|+.|++.+ ..+|+|.. .+ +.+++++
T Consensus 820 YE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyG 899 (1019)
T KOG0203|consen 820 YEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYG 899 (1019)
T ss_pred ccCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhcc
Confidence 9987643 122 2233456666654 559999999997665554 45666632 11 1122222
Q ss_pred -----------hhHHHHHHHHHHHHHHHHHhhhhccCCCCccc--cchHHHHHHHHHHHHHHHHhhhccccccccccccc
Q 003103 755 -----------PDEMMAALYLQVSIISQALIFVTRSRSWSFIE--RPGLLLATAFVIAQLVRVHFHLTNLNTTIHMGSSF 821 (847)
Q Consensus 755 -----------~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 821 (847)
+.+++|.+|+++++.|.+.++++.+++.+.+. ..|+.++++++.-.++.+++++ .++....+++.+
T Consensus 900 QeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y-~pg~~~~l~~~p 978 (1019)
T KOG0203|consen 900 QEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCY-CPGVLYALGMYP 978 (1019)
T ss_pred ccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhc-CccHHHHhccCC
Confidence 12357889999999999999999998866544 4688999999888777666654 444555677788
Q ss_pred cChhhHHH--HHHHHhhhHHHHHHhh
Q 003103 822 VSVHDFSW--YLFIETSSLSEMMHLF 845 (847)
Q Consensus 822 ~~~~~~~~--~l~i~~~~f~~~~~~~ 845 (847)
+.+.+|.. -..+....|||-||.+
T Consensus 979 l~~~~wl~a~P~~ilIfvydE~Rk~~ 1004 (1019)
T KOG0203|consen 979 LKFQWWLVAFPFGILIFVYDEVRKLF 1004 (1019)
T ss_pred CCcEEEEecccceeeeeeHHHHHhHh
Confidence 88865533 3344556699999875
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-97 Score=923.29 Aligned_cols=712 Identities=18% Similarity=0.233 Sum_probs=536.8
Q ss_pred cCCCccCccccchH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003103 50 FGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNA 125 (847)
Q Consensus 50 ~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~ 125 (847)
|..|.+...|++.| +.+++||.+|++++|+++++++++...... ..+...++++++++++.+.+.+++++++++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~--~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~ 78 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPT--YRGTSIVPLAFVLIVTAIKEAIEDIRRRRR 78 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCC--CccHhHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 67899999998875 778999999999999999999988543221 123344455666678888999999999888
Q ss_pred HHHHhhcCCCeEEEEEC-CeEEEEeCCCCCCCcEEEEcCCCeeccceEEEeeCc----eEEEeccccCCCceeecCCC--
Q 003103 126 AAALMANLAPKTKVLRD-GRWSEQDASILVPGDVISIKLGDIVPADARLLEGDP----LKIDQSALTGESLPVTKNPY-- 198 (847)
Q Consensus 126 ~~~l~~~~~~~~~V~rd-g~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~----~~Vdes~LTGEs~pv~K~~~-- 198 (847)
.++ .++++++|+|| |++++++++||+|||+|.|++||+||||++++++++ +.||||+|||||+|+.|.+.
T Consensus 79 d~~---~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~ 155 (1057)
T TIGR01652 79 DKE---VNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEE 155 (1057)
T ss_pred HHH---HhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchh
Confidence 754 35689999997 899999999999999999999999999999998544 89999999999999998641
Q ss_pred ----------------------------------------------Cccccceeeee-ceEEEEEEeccchhHhhhHHHh
Q 003103 199 ----------------------------------------------DEVFSGSTCKQ-GEIEAVVIATGVHTFFGKAAHL 231 (847)
Q Consensus 199 ----------------------------------------------~~v~~Gt~v~~-G~~~~~V~~tG~~T~~g~i~~~ 231 (847)
|.+++||.+.+ |.+.|+|++||.+|++++..
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~-- 233 (1057)
T TIGR01652 156 TQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNA-- 233 (1057)
T ss_pred hhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcC--
Confidence 45789999998 89999999999999887632
Q ss_pred hhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc----cch---------------HhHHHHHHHHHHHhhcC
Q 003103 232 VDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQH----RKY---------------RDGIDNLLVLLIGGIPI 292 (847)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----~~~---------------~~~~~~~~~ll~~~iP~ 292 (847)
.....+.+++++.++++..+++++.++.+++..++...+.. ..| ...+..++.++..++|+
T Consensus 234 ~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPi 313 (1057)
T TIGR01652 234 TQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPI 313 (1057)
T ss_pred CCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcce
Confidence 22234678999999999877554433323332222111111 011 12566788899999999
Q ss_pred chhHHHHHHHHHHH------HHhhcC----CceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccC-----
Q 003103 293 AMPTVLSVTMAIGS------HRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG----- 357 (847)
Q Consensus 293 ~L~~~~~~~~~~~~------~~l~~~----~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~----- 357 (847)
+||+.+++++..++ .+|.++ ++.+|+.+++|+||+|++||+|||||||+|+|+++++.+....++
T Consensus 314 sL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~ 393 (1057)
T TIGR01652 314 SLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTE 393 (1057)
T ss_pred eeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcch
Confidence 99999999999998 788864 599999999999999999999999999999999999865311000
Q ss_pred --------C--------------------C----------------hHHHHHHHHHhccc-------c-------CcchH
Q 003103 358 --------V--------------------E----------------KEHVILLAARASRT-------E-------NQDAI 379 (847)
Q Consensus 358 --------~--------------------~----------------~~~~l~~~~~~~~~-------~-------~~~~~ 379 (847)
. + ..+.+..++.|+.. . .++|.
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~ 473 (1057)
T TIGR01652 394 IKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPD 473 (1057)
T ss_pred HHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCc
Confidence 0 0 01233444445421 1 25899
Q ss_pred HHHHHHhcCCh---------H---------HHhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCC-
Q 003103 380 DAAIVGMLADP---------K---------EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC- 440 (847)
Q Consensus 380 ~~ai~~~~~~~---------~---------~~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~- 440 (847)
|.|+++++... . .....++.++.+||+|+||||++++++++|++++++|||||.|+++|+.
T Consensus 474 E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~ 553 (1057)
T TIGR01652 474 EAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSG 553 (1057)
T ss_pred HHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhcc
Confidence 99999875321 0 0124578889999999999999999988888899999999999999984
Q ss_pred ChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCC-------------------------CCCCCCCceEEEEecccCCCC
Q 003103 441 REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT-------------------------KESPGAPWQLVGLLPLFDPPR 495 (847)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~-------------------------~~~~e~~l~~lG~i~~~D~lr 495 (847)
+++.++++.+.+++++++|+||+++|+|.+++++ .+.+|++|+|+|+++++||||
T Consensus 554 ~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq 633 (1057)
T TIGR01652 554 GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQ 633 (1057)
T ss_pred chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhh
Confidence 3456778899999999999999999999987532 134689999999999999999
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCC-----------------------------------
Q 003103 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS----------------------------------- 540 (847)
Q Consensus 496 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~----------------------------------- 540 (847)
+|++++|+.||+|||++||+|||+++||.++|++||+.++.....
T Consensus 634 ~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 713 (1057)
T TIGR01652 634 EGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSG 713 (1057)
T ss_pred hccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 999999999999999999999999999999999999975321100
Q ss_pred ----cccCccccccCCc---chHHHHHHhcC--eEEEeChhhHHHHHHHHhhc-CCEEEEEcCCcCChhhhhhcCcceec
Q 003103 541 ----SLLGQDKDASIAA---LPVDELIEKAD--GFAGVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIAV 610 (847)
Q Consensus 541 ----~~~~~~~~~~~~~---~~~~~~~~~~~--v~ar~sP~qK~~iV~~lq~~-g~~V~miGDG~ND~~aLk~AdVGIam 610 (847)
.+.|...+..+++ +++.+++.+++ ||||++|+||.++|+.+|+. |++|+|+|||+||+||||+|||||++
T Consensus 714 ~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 714 NVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred ceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 1112111111111 12334555555 99999999999999999998 99999999999999999999999988
Q ss_pred -ccccHHHhhccCEEEcCCChhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC----CccHHHHHHH
Q 003103 611 -ADATDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKF----DFSPFMVLII 684 (847)
Q Consensus 611 -g~g~~~a~~aaDivl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~----~~~~~~~l~~ 684 (847)
|.....|+.+||+++. +|+.+.+++ .+||++|+|+++++.|.++.|+..++..+++.++..+ ++.+++++|+
T Consensus 794 ~g~eg~qA~~aaD~~i~--~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~ 871 (1057)
T TIGR01652 794 SGKEGMQAVMASDFAIG--QFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLY 871 (1057)
T ss_pred cChHHHHHHHhhhhhhh--hHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 4222257789999996 499999998 7799999999999999999999887777776655332 5788999999
Q ss_pred HHHhhhh-hccccc-CCCCCC----CCC--------CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccc
Q 003103 685 AILNDGT-IMTISK-DRVKPS----PQP--------DSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRS 750 (847)
Q Consensus 685 ~l~~~~~-~~~l~~-~~~~~~----~~~--------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (847)
|++++.+ +++++. |+..++ ..| ++....+.+..+++.|++++++.+++.++.+....... .|.
T Consensus 872 n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~~-~g~-- 948 (1057)
T TIGR01652 872 NVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFVS-SGS-- 948 (1057)
T ss_pred HHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccc-CCc--
Confidence 9999875 677754 332111 111 11222344555667899999888765444442211111 110
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHh
Q 003103 751 LRTRPDEMMAALYLQVSIISQALI 774 (847)
Q Consensus 751 ~~~~~~~~~t~~f~~~~~~~~~~~ 774 (847)
..+.....+..|..+++...+.+
T Consensus 949 -~~~~~~~~~~~~~~~~~~~~~~~ 971 (1057)
T TIGR01652 949 -LDDFSSVGVIVFTALVVIVNLKI 971 (1057)
T ss_pred -ccchhhHHHHHHHHHHHHHHHHH
Confidence 01223445666666665555543
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-97 Score=858.22 Aligned_cols=546 Identities=22% Similarity=0.341 Sum_probs=450.9
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcC-C--C-CCCchhhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhhcCCC-eEE
Q 003103 68 GFMWNPLSWVMEAAAIMAIALANG-G--G-RDPDWQDFVGIIVLLVINSTISFIE----ENNAGNAAAALMANLAP-KTK 138 (847)
Q Consensus 68 ~~~~~~~~~~l~~~~il~~~~~~~-~--~-~~~~~~~~~~i~~~i~~~~~~~~~~----e~~~~~~~~~l~~~~~~-~~~ 138 (847)
.+++||+.|+++++++++++++.. . + ....+++++.|.++++++..++.++ |+|+++++++|+++.++ +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 468999999999999999987631 1 0 0011245666777777777777776 78999999999998886 776
Q ss_pred -EEECCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEeeCceEEEeccccCCCceeecCCC---CccccceeeeeceEEE
Q 003103 139 -VLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY---DEVFSGSTCKQGEIEA 214 (847)
Q Consensus 139 -V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~---~~v~~Gt~v~~G~~~~ 214 (847)
|.|||++++|++++|+|||+|.+++||+|||||++++| ...||||+|||||.|+.|++| +.+|+||.+.+|++.+
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i 186 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKG-LATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEV 186 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEc-ceEEecchhcCCCCceeccCCCccCeeecCceeecceEEE
Confidence 77999999999999999999999999999999999999 569999999999999999999 8899999999999999
Q ss_pred EEEeccchhHhhhHHHhhhccC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCc
Q 003103 215 VVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIA 293 (847)
Q Consensus 215 ~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~ 293 (847)
+|+++|.+|++||+.+++++++ +++++|.....+...+.+. ++ +++.++..+ ....++...+...+++++++|||+
T Consensus 187 ~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~ii-~l-~~~~~~~~~-~~~~~~~~~~~~~val~V~~IP~a 263 (673)
T PRK14010 187 EITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTII-FL-VVILTMYPL-AKFLNFNLSIAMLIALAVCLIPTT 263 (673)
T ss_pred EEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhHH-HH-HHHHHHHHH-HhhccHHHHHHHHHHHHHHhhhhh
Confidence 9999999999999999998875 6788886655543322211 11 111111111 111234446677788888999999
Q ss_pred hhHHHHHHHHHHHHHhhcCCceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccCCChHHHHHHHHHhccc
Q 003103 294 MPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRT 373 (847)
Q Consensus 294 L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~ 373 (847)
||..++++.+.|+.||+|+|+++|+++++|++|++|++|||||||||+|++.+.++.. ..+.+.++++..++.++..
T Consensus 264 L~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~---~~~~~~~~ll~~a~~~~~~ 340 (673)
T PRK14010 264 IGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIP---VKSSSFERLVKAAYESSIA 340 (673)
T ss_pred HHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEe---CCCccHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999998877766432 2234556677777777655
Q ss_pred cCcchHHHHHHHhcCChHHHhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCCC-hHHHHHHHHHH
Q 003103 374 ENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVHAVI 452 (847)
Q Consensus 374 ~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~-~~~~~~~~~~~ 452 (847)
+ .||++.|++.++..... .......+++||++++|+|++.+ +|+ .+.||+||.++++|+.. ...+..+++..
T Consensus 341 s-~~P~~~AIv~~a~~~~~-~~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~ 413 (673)
T PRK14010 341 D-DTPEGRSIVKLAYKQHI-DLPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDALV 413 (673)
T ss_pred C-CChHHHHHHHHHHHcCC-CchhhhcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHHH
Confidence 4 49999999987642110 00011235689999999999864 243 45699999999999742 12234466777
Q ss_pred HHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 003103 453 DKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 532 (847)
Q Consensus 453 ~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi 532 (847)
++++++|+|+++++. |++++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++||
T Consensus 414 ~~~a~~G~~~l~v~~-------------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI 480 (673)
T PRK14010 414 KGVSKKGGTPLVVLE-------------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV 480 (673)
T ss_pred HHHHhCCCeEEEEEE-------------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC
Confidence 889999999998864 3489999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceeccc
Q 003103 533 GTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD 612 (847)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~ 612 (847)
. ++|||++||||.++|+.+|++|++|+|+|||+||+|||++||||||||+
T Consensus 481 ~------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgs 530 (673)
T PRK14010 481 D------------------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNS 530 (673)
T ss_pred c------------------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeCC
Confidence 4 2799999999999999999999999999999999999999999999999
Q ss_pred ccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003103 613 ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIAL 670 (847)
Q Consensus 613 g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~ 670 (847)
|+|+||++||+||+||||++|++++++||++|.|+++++.|.++.|++..+..+.+.|
T Consensus 531 GTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~ 588 (673)
T PRK14010 531 GTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMF 588 (673)
T ss_pred CCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999977665555444
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-96 Score=825.07 Aligned_cols=744 Identities=22% Similarity=0.325 Sum_probs=554.4
Q ss_pred HHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccccchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHH
Q 003103 26 EVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGII 105 (847)
Q Consensus 26 ~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~i~ 105 (847)
+..+......+||+.+++.+|+..||+|.+..+.++.+..++++..||| +++.+.+++.|.. +.+++++..|+
T Consensus 149 ~~~~~~~~~~~gL~~~~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL~Pf-YlFQ~fSv~lW~~------d~Y~~YA~cI~ 221 (1140)
T KOG0208|consen 149 RWYSTESYVSNGLERQEIIDRRIIYGRNVISLPIKSISQILVKEVLNPF-YLFQAFSVALWLA------DSYYYYAFCIV 221 (1140)
T ss_pred hhhccceeccCCccHHHHHhHHhhcCCceeeeecccHHHHHHHhccchH-HHHHhHHhhhhhc------ccchhhhhHHH
Confidence 4444555557899999999999999999999999999999999999999 5555555544443 23556666777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcC-CCeeccceEEEeeCceEEEec
Q 003103 106 VLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKL-GDIVPADARLLEGDPLKIDQS 184 (847)
Q Consensus 106 ~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~-G~~vPaD~~ll~g~~~~Vdes 184 (847)
++.+.+..++.+++++..+.++++-+ ....++|+|||.|++|+++|||||||+.+.+ |-..|||++|++| +|.||||
T Consensus 222 iisv~Si~~sv~e~r~qs~rlr~mv~-~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g-~civNEs 299 (1140)
T KOG0208|consen 222 IISVYSIVLSVYETRKQSIRLRSMVK-FTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISG-DCIVNES 299 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeC-cEEeecc
Confidence 78888888899999999888877654 5578999999999999999999999999988 9999999999999 6899999
Q ss_pred cccCCCceeecCCC-------------------Cccccceeeee------ceEEEEEEeccchhHhhhHHHhhhccCCCC
Q 003103 185 ALTGESLPVTKNPY-------------------DEVFSGSTCKQ------GEIEAVVIATGVHTFFGKAAHLVDSTNQVG 239 (847)
Q Consensus 185 ~LTGEs~pv~K~~~-------------------~~v~~Gt~v~~------G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 239 (847)
+|||||+|+.|.+. +.+|+||.+++ |.+.++|++||.+|..|++.+.+-.++..
T Consensus 300 mLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~- 378 (1140)
T KOG0208|consen 300 MLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPV- 378 (1140)
T ss_pred cccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCc-
Confidence 99999999999874 36899999986 55899999999999999998877766532
Q ss_pred chHHHHHHHHHH--HHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceec
Q 003103 240 HFQKVLTAIGNF--CICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 317 (847)
Q Consensus 240 ~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk 317 (847)
+++-.-+.+..+ +.++..++.+. .++.+...+.+....+.+++.++...+|+|||+++++...++.+||.|+||+|-
T Consensus 379 ~fkfyrds~~fi~~l~~ia~~gfiy-~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCi 457 (1140)
T KOG0208|consen 379 NFKFYRDSFKFILFLVIIALIGFIY-TAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCI 457 (1140)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHH-HhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEc
Confidence 233333333222 22222222222 122233457788899999999999999999999999999999999999999999
Q ss_pred cchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecc---c--------------------C-CCh-HHHHHHHHHhcc
Q 003103 318 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA---K--------------------G-VEK-EHVILLAARASR 372 (847)
Q Consensus 318 ~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~---~--------------------~-~~~-~~~l~~~~~~~~ 372 (847)
+++.+...|++|++|||||||||++.+.+..+....-+ . + ..+ ..+....+.|+.
T Consensus 458 sP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHS 537 (1140)
T KOG0208|consen 458 SPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHS 537 (1140)
T ss_pred CccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhce
Confidence 99999999999999999999999999998766541100 0 0 001 122333333332
Q ss_pred c------cCcchHHHHHHHhcC------------------------ChHH--------Hh-ccceEEEeecCCCCCcceE
Q 003103 373 T------ENQDAIDAAIVGMLA------------------------DPKE--------AR-AGVREVHFLPFNPVDKRTA 413 (847)
Q Consensus 373 ~------~~~~~~~~ai~~~~~------------------------~~~~--------~~-~~~~~~~~~pf~s~~k~~~ 413 (847)
. -.+||+|..+.+.-+ +|.+ .. ..+.+++.+||+|.-+|||
T Consensus 538 L~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMS 617 (1140)
T KOG0208|consen 538 LTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMS 617 (1140)
T ss_pred eEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEE
Confidence 1 124676654433210 0100 01 1467889999999999999
Q ss_pred EEEEcC-CCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCCC--------CCCCCCCCceE
Q 003103 414 LTYIDS-DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEK--------TKESPGAPWQL 484 (847)
Q Consensus 414 v~~~~~-~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~--------~~~~~e~~l~~ 484 (847)
|++.++ +.+.++|+|||||.|.++|+. +.+++.+++.++.|+.+|+|++|+|+|+++.. +++..|++|+|
T Consensus 618 VIv~~~~e~~~~~ftKGaPE~I~~ic~p-~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~F 696 (1140)
T KOG0208|consen 618 VIVSTGGEDKMMVFTKGAPESIAEICKP-ETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEF 696 (1140)
T ss_pred EEEecCCCCceEeeccCCHHHHHHhcCc-ccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhcccee
Confidence 999865 467899999999999999984 67889999999999999999999999999865 36788999999
Q ss_pred EEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC---------CCC---------------
Q 003103 485 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY---------PSS--------------- 540 (847)
Q Consensus 485 lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~---------~~~--------------- 540 (847)
+|++.||+++|++++++|++|++|+||++|+||||..||..+||+||+..... ++.
T Consensus 697 lGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~ 776 (1140)
T KOG0208|consen 697 LGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQT 776 (1140)
T ss_pred eEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCcc
Confidence 99999999999999999999999999999999999999999999999964210 000
Q ss_pred cccCc-cc-------c------------ccC-----------CcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEE
Q 003103 541 SLLGQ-DK-------D------------ASI-----------AALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICG 589 (847)
Q Consensus 541 ~~~~~-~~-------~------------~~~-----------~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~ 589 (847)
...+. +. . -.+ ..+.+++++.+..|||||+|+||.++|+.||+.|+.|+
T Consensus 777 ~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~Vg 856 (1140)
T KOG0208|consen 777 QFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVG 856 (1140)
T ss_pred ccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEE
Confidence 00000 00 0 001 12346667788999999999999999999999999999
Q ss_pred EEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003103 590 MTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 669 (847)
Q Consensus 590 miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~ 669 (847)
|||||+|||.|||+|||||+++++. |.-||.+.-.-.+.+++++.|++||+.+-.--..+.|...+.+..++..+ .+
T Consensus 857 fCGDGANDCgALKaAdvGISLSeaE--ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~-~L 933 (1140)
T KOG0208|consen 857 FCGDGANDCGALKAADVGISLSEAE--ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVV-FL 933 (1140)
T ss_pred ecCCCcchhhhhhhcccCcchhhhh--HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhh-ee
Confidence 9999999999999999999999643 45577887777899999999999999876666666666555543332221 11
Q ss_pred HhhcCCccHHHHHHHHHHhhhh-hcccc----cCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 003103 670 LIWKFDFSPFMVLIIAILNDGT-IMTIS----KDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSD 744 (847)
Q Consensus 670 ~~~~~~~~~~~~l~~~l~~~~~-~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 744 (847)
...+..++.+|.+++.++-..+ +..++ +++..+.|+|.+...++.+.-.+.+-+++.+.-+..+++....+|+..
T Consensus 934 Y~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP~~~L~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~p 1013 (1140)
T KOG0208|consen 934 YLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRPPTNLLSKKILVPLLLQIVLICLVQWILTLIVEPQPWYEP 1013 (1140)
T ss_pred eeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCCCccccccchhhhhHHHHHHHHHHHHhhheeeccccceec
Confidence 2234578889999999887654 44443 334444555555554555554444455555555555666666677642
Q ss_pred c-ccccccCCChhHHHHHHHHHHHHHHHHHhhhhccCCCCcccc
Q 003103 745 A-FGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIER 787 (847)
Q Consensus 745 ~-~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~~ 787 (847)
. .+. .++......|..|+ ++.+|++.+....|.+.+++++
T Consensus 1014 p~~~~--~~nt~s~~~T~lF~-vS~fqYi~~a~v~S~g~pfr~p 1054 (1140)
T KOG0208|consen 1014 PNPQV--DDNTQSSDNTSLFF-VSSFQYIFIALVLSKGSPFRRP 1054 (1140)
T ss_pred CCCCc--CcccccceeeEeee-hhHHHHHHhheeeccCCcccCc
Confidence 1 111 11122233455554 4667777766667776555443
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-94 Score=832.73 Aligned_cols=536 Identities=24% Similarity=0.321 Sum_probs=450.0
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcCC----CC---CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-eEEE
Q 003103 68 GFMWNPLSWVMEAAAIMAIALANGG----GR---DPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAP-KTKV 139 (847)
Q Consensus 68 ~~~~~~~~~~l~~~~il~~~~~~~~----~~---~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~-~~~V 139 (847)
.||+||+.++++++++++++++... +. ...|...+.+++.+++...++.++|+|+++.+++|++..+. +++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 4899999999999999999876311 11 12344445555666777778889999999999999998875 7999
Q ss_pred EECCe-EEEEeCCCCCCCcEEEEcCCCeeccceEEEeeCceEEEeccccCCCceeecCCCCc---cccceeeeeceEEEE
Q 003103 140 LRDGR-WSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDE---VFSGSTCKQGEIEAV 215 (847)
Q Consensus 140 ~rdg~-~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~---v~~Gt~v~~G~~~~~ 215 (847)
+|||+ +++|++++|+|||+|.+++||+|||||++++| ...||||+|||||.|+.|++|+. +|+||.|.+|.+.++
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG-~a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~ 187 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIR 187 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEc-cEEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEE
Confidence 99988 89999999999999999999999999999999 58999999999999999999988 999999999999999
Q ss_pred EEeccchhHhhhHHHhhhccC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCch
Q 003103 216 VIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAM 294 (847)
Q Consensus 216 V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L 294 (847)
|+++|.+|.+||+.+++++++ ++++++...+.+...+...+++.++..+.+.+ +.+.. .++..++++++++|||++
T Consensus 188 Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~-~~g~~--~~l~~~iallV~aiP~al 264 (679)
T PRK01122 188 ITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAA-YSGGA--LSITVLVALLVCLIPTTI 264 (679)
T ss_pred EEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHH-HhCch--HHHHHHHHHHHHcccchh
Confidence 999999999999999998875 67888887776654433222221221111112 12222 367888999999999999
Q ss_pred hHHHHHHHHHHHHHhhcCCceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccCCChHHHHHHHHHhcccc
Q 003103 295 PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTE 374 (847)
Q Consensus 295 ~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 374 (847)
+..++.+...|+.||+|+|+++|+++++|++|++|++|||||||||+|+|.+.++.. ..+.+.++++..++.++..+
T Consensus 265 g~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~a~~~s~~s 341 (679)
T PRK01122 265 GGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLP---VPGVTEEELADAAQLSSLAD 341 (679)
T ss_pred hhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEe---CCCCCHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999999999999999988753 23456677788777777665
Q ss_pred CcchHHHHHHHhcCCh---HHHhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCCC-hHHHHHHHH
Q 003103 375 NQDAIDAAIVGMLADP---KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVHA 450 (847)
Q Consensus 375 ~~~~~~~ai~~~~~~~---~~~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~-~~~~~~~~~ 450 (847)
. ||.+.+++.++... ......++..+++||++.++++++.+ +| ..+.||++|.+++.|+.. .+.++++++
T Consensus 342 ~-hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~~ 415 (679)
T PRK01122 342 E-TPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELDA 415 (679)
T ss_pred C-CchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHHH
Confidence 5 89999998876431 11111244567899999988887643 34 578999999999999532 234567788
Q ss_pred HHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc
Q 003103 451 VIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (847)
Q Consensus 451 ~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~ 530 (847)
.+++++++|+|++++|++ ++++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++
T Consensus 416 ~~~~~a~~G~~~l~va~~-------------~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~el 482 (679)
T PRK01122 416 AVDEVARKGGTPLVVAED-------------NRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA 482 (679)
T ss_pred HHHHHHhCCCcEEEEEEC-------------CeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc
Confidence 889999999999999974 3899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceec
Q 003103 531 GMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (847)
Q Consensus 531 Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIam 610 (847)
||++ +|||++||||.++|+.+|++|++|+|+|||+||+|||++|||||||
T Consensus 483 GId~------------------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAM 532 (679)
T PRK01122 483 GVDD------------------------------FLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM 532 (679)
T ss_pred CCcE------------------------------EEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEe
Confidence 9942 7999999999999999999999999999999999999999999999
Q ss_pred ccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003103 611 ADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 659 (847)
Q Consensus 611 g~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~ 659 (847)
|+|+|+||++||+|++||||++|++++++||++.-.--....|++..-+
T Consensus 533 gsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~ 581 (679)
T PRK01122 533 NSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDV 581 (679)
T ss_pred CCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHH
Confidence 9999999999999999999999999999999998444445666665444
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-91 Score=853.15 Aligned_cols=680 Identities=16% Similarity=0.163 Sum_probs=511.8
Q ss_pred hhcCCCccCccccchH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 003103 48 HVFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAG 123 (847)
Q Consensus 48 ~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~ 123 (847)
.+|..|.+.+.|++.| +.+++||..+.+++|++.++++++..... ...+...+.+++++++.++.+.+++++++
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~--~~~~t~~~PL~~vl~v~~ike~~Ed~~r~ 162 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAV--FGRGASILPLAFVLLVTAVKDAYEDWRRH 162 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCccc--CCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3688999999999875 67789999999999999999998754322 12445566777788888888888888888
Q ss_pred HHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEeeC----ceEEEeccccCCCceeecCCC-
Q 003103 124 NAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVTKNPY- 198 (847)
Q Consensus 124 ~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~----~~~Vdes~LTGEs~pv~K~~~- 198 (847)
++.++. ++..++|+|+|+++++++++|+|||+|.|++||+||||+++++++ .++||||+|||||+|+.|.++
T Consensus 163 k~d~~~---N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~ 239 (1178)
T PLN03190 163 RSDRIE---NNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQ 239 (1178)
T ss_pred HhHHhh---cCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccc
Confidence 876553 567899999999999999999999999999999999999999843 489999999999999999753
Q ss_pred --------------------------------------------Cccccceeeeec-eEEEEEEeccchhHhhhHHHhhh
Q 003103 199 --------------------------------------------DEVFSGSTCKQG-EIEAVVIATGVHTFFGKAAHLVD 233 (847)
Q Consensus 199 --------------------------------------------~~v~~Gt~v~~G-~~~~~V~~tG~~T~~g~i~~~~~ 233 (847)
|.+++||.+.+. .+.|+|++||.+|+... +...
T Consensus 240 ~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~--N~~~ 317 (1178)
T PLN03190 240 ETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAML--NNSG 317 (1178)
T ss_pred hhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhh--cCCC
Confidence 234556666655 49999999999998432 2222
Q ss_pred ccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHh--hhhccc-c------------------------ch----HhHHHHH
Q 003103 234 STNQVGHFQKVLTAIGNFCICSIAVGIVAEIII--MYPVQH-R------------------------KY----RDGIDNL 282 (847)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~-~------------------------~~----~~~~~~~ 282 (847)
...+.+++++.++++..+++++.++.+++..++ .|.... . .+ ...+..+
T Consensus 318 ~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 397 (1178)
T PLN03190 318 APSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMS 397 (1178)
T ss_pred CCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHH
Confidence 224778999999998876544433322222222 111100 0 00 1112233
Q ss_pred HHHHHHhhcCchhHHHHHHHHHHHHHhhcCC----------ceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeee
Q 003103 283 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG----------AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIE 352 (847)
Q Consensus 283 ~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~----------ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~ 352 (847)
+.++..+||++|++.+++++...+..+.++. +.+|+.+..|+||+|++||+|||||||+|+|+++++.+.
T Consensus 398 lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~ 477 (1178)
T PLN03190 398 VIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIW 477 (1178)
T ss_pred HHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEEC
Confidence 4566689999999999999987777776654 789999999999999999999999999999999998752
Q ss_pred ecccC-----------------------------------------CC-h-----HHHHHHHHHhccc-----c------
Q 003103 353 VFAKG-----------------------------------------VE-K-----EHVILLAARASRT-----E------ 374 (847)
Q Consensus 353 ~~~~~-----------------------------------------~~-~-----~~~l~~~~~~~~~-----~------ 374 (847)
...++ .+ + .+.+...+.|+.. +
T Consensus 478 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~ 557 (1178)
T PLN03190 478 GVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPT 557 (1178)
T ss_pred CEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCcc
Confidence 11000 00 0 1234444555422 0
Q ss_pred -------CcchHHHHHHHhcCCh----------------HHHhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcH
Q 003103 375 -------NQDAIDAAIVGMLADP----------------KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAP 431 (847)
Q Consensus 375 -------~~~~~~~ai~~~~~~~----------------~~~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~ 431 (847)
..+|.|.|++.++.+. ...+..++.++.+||+|+||||++++++++|++++++||||
T Consensus 558 ~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~ 637 (1178)
T PLN03190 558 VKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGAD 637 (1178)
T ss_pred ccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCc
Confidence 1268999999876321 22356788999999999999999999988888999999999
Q ss_pred HHHHHhcCCC--hHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCC-------------------------CCCCCCceE
Q 003103 432 EQILALCNCR--EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK-------------------------ESPGAPWQL 484 (847)
Q Consensus 432 e~i~~~~~~~--~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~-------------------------~~~e~~l~~ 484 (847)
|.|+++|+.. .+.++++.+.+++|+++|+|||++|||.+++++. +.+|+||++
T Consensus 638 e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~ 717 (1178)
T PLN03190 638 TSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTI 717 (1178)
T ss_pred HHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEE
Confidence 9999999742 3567788899999999999999999999875321 346899999
Q ss_pred EEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcc----------------------
Q 003103 485 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL---------------------- 542 (847)
Q Consensus 485 lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~---------------------- 542 (847)
+|+++++|+||++++++|++|+++||++||+|||+++||.+||++|||.++....-.+
T Consensus 718 lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~ 797 (1178)
T PLN03190 718 LGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKL 797 (1178)
T ss_pred EEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhc
Confidence 9999999999999999999999999999999999999999999999996542110000
Q ss_pred -------------------------cCccccccCC---cchHHHHHHhcC--eEEEeChhhHHHHHHHHhhc-CCEEEEE
Q 003103 543 -------------------------LGQDKDASIA---ALPVDELIEKAD--GFAGVFPEHKYEIVKRLQER-KHICGMT 591 (847)
Q Consensus 543 -------------------------~~~~~~~~~~---~~~~~~~~~~~~--v~ar~sP~qK~~iV~~lq~~-g~~V~mi 591 (847)
.|......++ .+.+.++..++. ||||++|+||+++|+.+|++ +++|+||
T Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaI 877 (1178)
T PLN03190 798 TTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAI 877 (1178)
T ss_pred cccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 0000000001 123445555665 79999999999999999998 5899999
Q ss_pred cCCcCChhhhhhcCcceec-c-cccHHHhhccCEEEcCCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003103 592 GDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAVL-TSRAIFQRMKNYTIYAVSITIRIVLGFMLI 668 (847)
Q Consensus 592 GDG~ND~~aLk~AdVGIam-g-~g~~~a~~aaDivl~~~~~~~i~~~i~-~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~ 668 (847)
|||+||+||||+|||||++ | +|.+ |..+||+.+ ..|..+.+++. +||+.|+|+.+.+.|.+++|+.+.+..+++
T Consensus 878 GDGaNDv~mIq~AdVGIGIsG~EG~q-A~~aSDfaI--~~Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f 954 (1178)
T PLN03190 878 GDGANDVSMIQMADVGVGISGQEGRQ-AVMASDFAM--GQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWY 954 (1178)
T ss_pred CCCcchHHHHHhcCeeeeecCchhHH-HHHhhccch--hhhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987 5 5555 555999999 56888888875 699999999999999999999988888888
Q ss_pred HHhhcCC----ccHHHHHHHHHHhh-hhhccc-ccCCCCCC----CCC--------CcccHHHHHHHHHHHHHHHHHHHH
Q 003103 669 ALIWKFD----FSPFMVLIIAILND-GTIMTI-SKDRVKPS----PQP--------DSWKLKEIFATGVVLGSYLAIMTV 730 (847)
Q Consensus 669 ~~~~~~~----~~~~~~l~~~l~~~-~~~~~l-~~~~~~~~----~~~--------~~~~~~~~~~~~~~~g~~~~~~~~ 730 (847)
.++.+|. +.++.+.+.|++.. ++.+.+ .+|+.-+. ..| ++....+.+..+++.|++++++.|
T Consensus 955 ~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~iif 1034 (1178)
T PLN03190 955 VLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVVF 1034 (1178)
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHHHHHHHHHHHHHH
Confidence 8777663 45666777776655 455555 34443221 011 111223455556777999998888
Q ss_pred HHHHHHH
Q 003103 731 VFFWLMR 737 (847)
Q Consensus 731 ~~~~~~~ 737 (847)
++.++.+
T Consensus 1035 f~~~~~~ 1041 (1178)
T PLN03190 1035 FVPLFAY 1041 (1178)
T ss_pred HHHHHHh
Confidence 6555444
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-89 Score=791.54 Aligned_cols=538 Identities=22% Similarity=0.320 Sum_probs=450.3
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcC----C--CCCCchhhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-eE
Q 003103 68 GFMWNPLSWVMEAAAIMAIALANG----G--GRDPDWQDF---VGIIVLLVINSTISFIEENNAGNAAAALMANLAP-KT 137 (847)
Q Consensus 68 ~~~~~~~~~~l~~~~il~~~~~~~----~--~~~~~~~~~---~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~-~~ 137 (847)
.||.||+.++++++++++++++.. . +....|++. +.+++.+++..+++.++|+|+++++++|++..++ .+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 478999999999999999997531 1 111236654 3344456777888889999999999999998876 48
Q ss_pred EEEE-CCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEeeCceEEEeccccCCCceeecCCCCc---cccceeeeeceEE
Q 003103 138 KVLR-DGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDE---VFSGSTCKQGEIE 213 (847)
Q Consensus 138 ~V~r-dg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~---v~~Gt~v~~G~~~ 213 (847)
+|+| ||++++|++++|+|||+|.+++||+|||||++++| .+.||||+|||||.|+.|++|+. +|+||.+.+|.+.
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~ 186 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEG-VASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLV 186 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc-cEEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEE
Confidence 8885 89999999999999999999999999999999999 68999999999999999999975 8999999999999
Q ss_pred EEEEeccchhHhhhHHHhhhccC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcC
Q 003103 214 AVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPI 292 (847)
Q Consensus 214 ~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~ 292 (847)
++|+++|.+|.+||+.+++++++ +++|+|...+.+..++.+++++..+. +..+.... .....+...+++++++|||
T Consensus 187 i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~--~~~~~~~~-~~~~~~~~lvallV~aiP~ 263 (675)
T TIGR01497 187 VECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTAT--LWPFAAYG-GNAISVTVLVALLVCLIPT 263 (675)
T ss_pred EEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhc-ChhHHHHHHHHHHHHhCch
Confidence 99999999999999999998875 67899987777665433222221111 11111111 1223567778999999999
Q ss_pred chhHHHHHHHHHHHHHhhcCCceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccCCChHHHHHHHHHhcc
Q 003103 293 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASR 372 (847)
Q Consensus 293 ~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~ 372 (847)
+++...+.....|+.||+|+|+++|+++++|++|++|++|||||||||+|+|++.++.. ..+.+.++++..++.++.
T Consensus 264 aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~aa~~~~ 340 (675)
T TIGR01497 264 TIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIP---AQGVDEKTLADAAQLASL 340 (675)
T ss_pred hhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEe---cCCCcHHHHHHHHHHhcC
Confidence 88877777777899999999999999999999999999999999999999999988753 234566778888877776
Q ss_pred ccCcchHHHHHHHhcCChHH--HhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCCC-hHHHHHHH
Q 003103 373 TENQDAIDAAIVGMLADPKE--ARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVH 449 (847)
Q Consensus 373 ~~~~~~~~~ai~~~~~~~~~--~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~-~~~~~~~~ 449 (847)
.++ ||.+.+++.++.+... ....++..+..||++.++++++.+. +| ..+.||+||.+++.|+.. ...+++++
T Consensus 341 ~s~-hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~ 415 (675)
T TIGR01497 341 ADD-TPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLD 415 (675)
T ss_pred CCC-CcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHH
Confidence 654 8999999887642111 0112344678999999877765443 45 468999999999888532 23345678
Q ss_pred HHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH
Q 003103 450 AVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR 529 (847)
Q Consensus 450 ~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~ 529 (847)
+.+++++++|+|++++|++. +++|+++++||+|||++++|++||++|++++|+||||+.+|.++|++
T Consensus 416 ~~~~~~a~~G~r~l~va~~~-------------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~ 482 (675)
T TIGR01497 416 QAVDQVARQGGTPLVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE 482 (675)
T ss_pred HHHHHHHhCCCeEEEEEECC-------------EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 88899999999999999853 89999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCccee
Q 003103 530 LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609 (847)
Q Consensus 530 ~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIa 609 (847)
+|+.+ ++||++|+||.++|+.+|++|+.|+|+|||+||+|||++||||||
T Consensus 483 lGI~~------------------------------v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiA 532 (675)
T TIGR01497 483 AGVDD------------------------------FIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVA 532 (675)
T ss_pred cCCCE------------------------------EEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEE
Confidence 99942 699999999999999999999999999999999999999999999
Q ss_pred cccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003103 610 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660 (847)
Q Consensus 610 mg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~ 660 (847)
|++|+++|+++||++++||||++|++++++||+++-+......|+++.+++
T Consensus 533 m~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~ 583 (675)
T TIGR01497 533 MNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVA 583 (675)
T ss_pred eCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHH
Confidence 999999999999999999999999999999999999999999998887764
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-87 Score=773.53 Aligned_cols=508 Identities=28% Similarity=0.386 Sum_probs=440.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEE-CCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEe
Q 003103 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR-DGRWSEQDASILVPGDVISIKLGDIVPADARLLE 175 (847)
Q Consensus 97 ~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r-dg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~ 175 (847)
+|.+++.+++++.+...++.+...|+++++++|.++.|+++++++ ||++++||.++|+|||+|.|+|||+||+||+|++
T Consensus 173 yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~ 252 (713)
T COG2217 173 YFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVS 252 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEe
Confidence 336777788889999999999999999999999999999998877 5559999999999999999999999999999999
Q ss_pred eCceEEEeccccCCCceeecCCCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhccC-CCCchHHHHHHHHHHHHH
Q 003103 176 GDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCIC 254 (847)
Q Consensus 176 g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~~~ 254 (847)
| ...||||++||||.|+.|.+||.|++||.+.+|..+..|+++|.+|.+++|.+++++++ ++++.|+..|+++.++..
T Consensus 253 G-~s~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp 331 (713)
T COG2217 253 G-SSSVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVP 331 (713)
T ss_pred C-cEEeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHH
Confidence 9 46899999999999999999999999999999999999999999999999999999886 788999999999998877
Q ss_pred HHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceeccchhhhhcCCeEEEEec
Q 003103 255 SIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 334 (847)
Q Consensus 255 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~D 334 (847)
.+++..++.++++++..+.+|..++..++++++++|||+|.+++|++...+..+.+++|+++|+.+++|.++++|+++||
T Consensus 332 ~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFD 411 (713)
T COG2217 332 VVLVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFD 411 (713)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEe
Confidence 55444444444444444468889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCceEEEEEeeeecccCCChHHHHHHHHHhccccCcchHHHHHHHhcCChHHHhccceEEEeecCCCCCcceEE
Q 003103 335 KTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTAL 414 (847)
Q Consensus 335 KTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~s~~k~~~v 414 (847)
||||||+|+|+|.++.. . .+ ++++++.+++..+..++ ||+..|+++++.+.. ....+..+.+|-. .-.+
T Consensus 412 KTGTLT~G~p~v~~v~~--~-~~-~e~~~L~laAalE~~S~-HPiA~AIv~~a~~~~--~~~~~~~~~i~G~---Gv~~- 480 (713)
T COG2217 412 KTGTLTEGKPEVTDVVA--L-DG-DEDELLALAAALEQHSE-HPLAKAIVKAAAERG--LPDVEDFEEIPGR---GVEA- 480 (713)
T ss_pred CCCCCcCCceEEEEEec--C-CC-CHHHHHHHHHHHHhcCC-ChHHHHHHHHHHhcC--CCCccceeeeccC---cEEE-
Confidence 99999999999998763 2 23 77889999988877776 999999999664322 1122223333311 1111
Q ss_pred EEEcCCCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCC
Q 003103 415 TYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPP 494 (847)
Q Consensus 415 ~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~l 494 (847)
..+| ..+..|+++.+.+.-. +... ..+..+.+.++|..++.++.+. +++|+++++|++
T Consensus 481 ---~v~g--~~v~vG~~~~~~~~~~---~~~~-~~~~~~~~~~~G~t~v~va~dg-------------~~~g~i~~~D~~ 538 (713)
T COG2217 481 ---EVDG--ERVLVGNARLLGEEGI---DLPL-LSERIEALESEGKTVVFVAVDG-------------KLVGVIALADEL 538 (713)
T ss_pred ---EECC--EEEEEcCHHHHhhcCC---Cccc-hhhhHHHHHhcCCeEEEEEECC-------------EEEEEEEEeCCC
Confidence 1245 4566799998765221 1111 4556678888999888888865 899999999999
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhH
Q 003103 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574 (847)
Q Consensus 495 r~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK 574 (847)
|||++++|++||+.|+++.|+||||..+|+++|+++||++ ++|.+.||||
T Consensus 539 R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~------------------------------v~AellPedK 588 (713)
T COG2217 539 RPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE------------------------------VRAELLPEDK 588 (713)
T ss_pred ChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh------------------------------heccCCcHHH
Confidence 9999999999999999999999999999999999999942 7999999999
Q ss_pred HHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 003103 575 YEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 654 (847)
Q Consensus 575 ~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~ 654 (847)
.++|+.||++|++|+|+|||+||+|||++||||||||+|+|+|+++||++|++|+++.++++++.+|+++++||+|+.|+
T Consensus 589 ~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A 668 (713)
T COG2217 589 AEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWA 668 (713)
T ss_pred HHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 003103 655 VSITIRIVLGFMLI 668 (847)
Q Consensus 655 ~~~n~~~~~~~~~~ 668 (847)
+.+|...++...+.
T Consensus 669 ~~yn~~~iplA~~g 682 (713)
T COG2217 669 FGYNAIAIPLAAGG 682 (713)
T ss_pred HHHHHHHHHHHHHh
Confidence 99998766554443
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-81 Score=748.30 Aligned_cols=501 Identities=26% Similarity=0.359 Sum_probs=435.7
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEee
Q 003103 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (847)
Q Consensus 97 ~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g 176 (847)
.|.+++.++++++++..++.++++|+++.+++|+++.+++++|+|||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g 284 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP 284 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEEC
Confidence 67888888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEeccccCCCceeecCCCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhccC-CCCchHHHHHHHHHHHHHH
Q 003103 177 DPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICS 255 (847)
Q Consensus 177 ~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 255 (847)
...||||+|||||.|+.|++||.+|+||.+.+|.++++|+++|.+|.+|||.+++++++ +++++|+.++++++++...
T Consensus 285 -~~~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~ 363 (741)
T PRK11033 285 -FASFDESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPA 363 (741)
T ss_pred -cEEeecccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999998875 6799999999999987665
Q ss_pred HHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceeccchhhhhcCCeEEEEecC
Q 003103 256 IAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 335 (847)
Q Consensus 256 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DK 335 (847)
+++..++.+++++...+.+|..++..++++++++|||+|.+++|++...+..+++|+|+++|+++++|+++++|++||||
T Consensus 364 v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDK 443 (741)
T PRK11033 364 IMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDK 443 (741)
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeC
Confidence 55544443443334456678888999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCceEEEEEeeeecccCCChHHHHHHHHHhccccCcchHHHHHHHhcCChHHHhccceEEEeecCCCCCcceEEE
Q 003103 336 TGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALT 415 (847)
Q Consensus 336 TGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~s~~k~~~v~ 415 (847)
|||||+|+|+|.++.. ..+.++++++.+++..+..+ .||++.|+++++.+. +. .+||.++.+.+.-.
T Consensus 444 TGTLT~g~~~v~~~~~---~~~~~~~~~l~~aa~~e~~s-~hPia~Ai~~~a~~~-----~~----~~~~~~~~~~~~g~ 510 (741)
T PRK11033 444 TGTLTEGKPQVTDIHP---ATGISESELLALAAAVEQGS-THPLAQAIVREAQVR-----GL----AIPEAESQRALAGS 510 (741)
T ss_pred CCCCcCCceEEEEEEe---cCCCCHHHHHHHHHHHhcCC-CCHHHHHHHHHHHhc-----CC----CCCCCcceEEEeeE
Confidence 9999999999998753 23456777787777665444 499999999876421 11 24666665554311
Q ss_pred -EE-cCCCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCC
Q 003103 416 -YI-DSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDP 493 (847)
Q Consensus 416 -~~-~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~ 493 (847)
++ ..+|+. +..|+++.+.+ ..+.+.+.++++.++|+|+++++++. +++|+++++|+
T Consensus 511 Gv~~~~~g~~--~~ig~~~~~~~-------~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~i~l~d~ 568 (741)
T PRK11033 511 GIEGQVNGER--VLICAPGKLPP-------LADAFAGQINELESAGKTVVLVLRND-------------DVLGLIALQDT 568 (741)
T ss_pred EEEEEECCEE--EEEecchhhhh-------ccHHHHHHHHHHHhCCCEEEEEEECC-------------EEEEEEEEecC
Confidence 11 224543 34589988754 12334455678899999999999854 89999999999
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhh
Q 003103 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (847)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~q 573 (847)
+|||++++|++||++|++++|+|||+..+|.++|+++||. .+++++|+|
T Consensus 569 ~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~ 617 (741)
T PRK11033 569 LRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-------------------------------FRAGLLPED 617 (741)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-------------------------------eecCCCHHH
Confidence 9999999999999999999999999999999999999983 367889999
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHH
Q 003103 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 653 (847)
Q Consensus 574 K~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~ 653 (847)
|.++|+.+|+. +.|+|+|||+||+|||++|||||+||+|+++++++||++++++++..+++++++||++++||++|+.|
T Consensus 618 K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~ 696 (741)
T PRK11033 618 KVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITI 696 (741)
T ss_pred HHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999965 58999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 003103 654 AVSITIRIVLGF 665 (847)
Q Consensus 654 ~~~~n~~~~~~~ 665 (847)
++.+|...+...
T Consensus 697 a~~~n~~~i~~a 708 (741)
T PRK11033 697 ALGLKAIFLVTT 708 (741)
T ss_pred HHHHHHHHHHHH
Confidence 999997655433
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-83 Score=719.75 Aligned_cols=536 Identities=24% Similarity=0.328 Sum_probs=451.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCe-EEEEeCCCCCCCcEEEEcCCCeeccceEEEeeCc
Q 003103 100 DFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGR-WSEQDASILVPGDVISIKLGDIVPADARLLEGDP 178 (847)
Q Consensus 100 ~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~-~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~ 178 (847)
...+++.++.+...++.....|+..++..|+.+.+.++.++.+|+ .++||.+.|++||+|.+.||++||+||++++| +
T Consensus 343 t~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~G-s 421 (951)
T KOG0207|consen 343 TSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDG-S 421 (951)
T ss_pred ccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEeC-c
Confidence 334455567777777878888888899999999999999999996 89999999999999999999999999999999 5
Q ss_pred eEEEeccccCCCceeecCCCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhccC-CCCchHHHHHHHHHHHHHHHH
Q 003103 179 LKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIA 257 (847)
Q Consensus 179 ~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~ 257 (847)
++||||++|||++||.|++|+.|.+||.+.+|.....++++|.+|.+++|.+++++++ .+.|.|+.+|+++.++...++
T Consensus 422 s~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi 501 (951)
T KOG0207|consen 422 SEVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVI 501 (951)
T ss_pred eeechhhccCCceecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhh
Confidence 7999999999999999999999999999999999999999999999999999999986 788999999999998766555
Q ss_pred HHHHHHHHhhhhccc----------cchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceeccchhhhhcCC
Q 003103 258 VGIVAEIIIMYPVQH----------RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAG 327 (847)
Q Consensus 258 ~~~~~~~~~~~~~~~----------~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~ 327 (847)
+..++.++++.+... ..+..++..++++++++|||+|.+++|++...|....+++|+++|..+.+|.+.+
T Consensus 502 ~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hk 581 (951)
T KOG0207|consen 502 VLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHK 581 (951)
T ss_pred HHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhc
Confidence 544443333332222 3456678888999999999999999999999999999999999999999999999
Q ss_pred eEEEEecCCCccccCceEEEEEeeeecccCCChHHHHHHHHHhccccCcchHHHHHHHhcCChHHHhccceEEEeecCCC
Q 003103 328 MDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNP 407 (847)
Q Consensus 328 v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~s 407 (847)
+++++||||||||+|++.|.++.. .....+..+++.+++..+..+ .||+..|+++++.+............+..|..
T Consensus 582 v~tVvFDKTGTLT~G~~~V~~~~~--~~~~~~~~e~l~~v~a~Es~S-eHPig~AIv~yak~~~~~~~~~~~~~~~~~pg 658 (951)
T KOG0207|consen 582 VKTVVFDKTGTLTEGKPTVVDFKS--LSNPISLKEALALVAAMESGS-EHPIGKAIVDYAKEKLVEPNPEGVLSFEYFPG 658 (951)
T ss_pred CCEEEEcCCCceecceEEEEEEEe--cCCcccHHHHHHHHHHHhcCC-cCchHHHHHHHHHhcccccCccccceeecccC
Confidence 999999999999999999998764 332355666777666655544 49999999999864331111111122222222
Q ss_pred CCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEE
Q 003103 408 VDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487 (847)
Q Consensus 408 ~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~ 487 (847)
+.....+. .+|+. .+-|.-+.+...-. ...+++++.+++....|..+.+++... +++|+
T Consensus 659 ~g~~~~~~---~~~~~--i~iGN~~~~~r~~~---~~~~~i~~~~~~~e~~g~tvv~v~vn~-------------~l~gv 717 (951)
T KOG0207|consen 659 EGIYVTVT---VDGNE--VLIGNKEWMSRNGC---SIPDDILDALTESERKGQTVVYVAVNG-------------QLVGV 717 (951)
T ss_pred CCcccceE---EeeeE--EeechHHHHHhcCC---CCchhHHHhhhhHhhcCceEEEEEECC-------------EEEEE
Confidence 22221111 13433 66799888765322 234557777888889999999999987 89999
Q ss_pred ecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEE
Q 003103 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (847)
Q Consensus 488 i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 567 (847)
+.++|++|||+..+|+.||+.|+++.|+||||..+|+++|+++||. +|||
T Consensus 718 ~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~------------------------------~V~a 767 (951)
T KOG0207|consen 718 FALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID------------------------------NVYA 767 (951)
T ss_pred EEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc------------------------------eEEe
Confidence 9999999999999999999999999999999999999999999974 3899
Q ss_pred EeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHH
Q 003103 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRM 647 (847)
Q Consensus 568 r~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i 647 (847)
.+.|+||.++|+.+|++++.|+|+|||+||+|||.+|||||+||.|+++|.++||+||+.+|+..++.+++.+|++.+|+
T Consensus 768 ev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rI 847 (951)
T KOG0207|consen 768 EVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRI 847 (951)
T ss_pred ccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHhhh
Q 003103 648 KNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDG 690 (847)
Q Consensus 648 ~~~i~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 690 (847)
|.|+.|++.+|+..++...+.++.+++.++|+.-.....++..
T Consensus 848 k~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~SSv 890 (951)
T KOG0207|consen 848 KLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAASSV 890 (951)
T ss_pred HHHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhhhH
Confidence 9999999999998888777777777777888876666655554
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-78 Score=703.17 Aligned_cols=475 Identities=36% Similarity=0.539 Sum_probs=415.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEeeCceEEE
Q 003103 105 IVLLVINSTISFIEENNAGNAAAALMA--NLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKID 182 (847)
Q Consensus 105 ~~~i~~~~~~~~~~e~~~~~~~~~l~~--~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~~~Vd 182 (847)
+++++++.+++.++++++++..+.+.+ ..+++++|+|+| +++|++++|+|||+|.+++||+|||||++++| .+.||
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g-~~~vd 80 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSG-SCFVD 80 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEc-cEEEE
Confidence 345678888899999999999999988 788899999999 99999999999999999999999999999999 68999
Q ss_pred eccccCCCceeecCCCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhccCC-CCchHHHHHHHH-HHHHHHHHHHH
Q 003103 183 QSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ-VGHFQKVLTAIG-NFCICSIAVGI 260 (847)
Q Consensus 183 es~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~-~~~~~~~~~~~~-~~~~~~i~~~~ 260 (847)
||+|||||.|+.|.+++.+++||.+.+|+..+.|+++|.+|..+++..++.+... ++++++..+++. .+++..+++..
T Consensus 81 es~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la 160 (499)
T TIGR01494 81 ESNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIA 160 (499)
T ss_pred cccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999987654 678899999988 45443333322
Q ss_pred HHHHHhhhhcccc--chHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceeccchhhhhcCCeEEEEecCCCc
Q 003103 261 VAEIIIMYPVQHR--KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGT 338 (847)
Q Consensus 261 ~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGT 338 (847)
++.++.++..... +|..++.+++++++++|||+||+++++++..+..+++++|+++|+++++|+||++|++|||||||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGT 240 (499)
T TIGR01494 161 LAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGT 240 (499)
T ss_pred HHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCc
Confidence 2222222211112 37788999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCceEEEEEeeeecccCCChHHHHHHHHHhccccCcchHHHHHHHhcCChHHHhccceEEEeecCCCCCcceEEEEEc
Q 003103 339 LTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYID 418 (847)
Q Consensus 339 LT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~s~~k~~~v~~~~ 418 (847)
||+|+|++.++... . . ....+||++.|+++++.. +.+...||++.+++++++++.
T Consensus 241 LT~~~~~v~~~~~~--~-~--------------~~~s~hp~~~ai~~~~~~--------~~~~~~~f~~~~~~~~~~~~~ 295 (499)
T TIGR01494 241 LTKNEMSFKKVSVL--G-G--------------EYLSGHPDERALVKSAKW--------KILNVFEFSSVRKRMSVIVRG 295 (499)
T ss_pred cccCceEEEEEEec--C-C--------------CcCCCChHHHHHHHHhhh--------cCcceeccCCCCceEEEEEec
Confidence 99999999987641 1 0 123459999999987642 123567999999999988875
Q ss_pred CCCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCCCcch
Q 003103 419 SDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDS 498 (847)
Q Consensus 419 ~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~ 498 (847)
.++ .++||+++.+.+.|.. +.+..++++++|+|++++|++. +++|++.++|++|+++
T Consensus 296 ~~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~~~ 352 (499)
T TIGR01494 296 PDG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRDDA 352 (499)
T ss_pred CCc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEEEEecCCCchhH
Confidence 323 4689999999988742 2334556788999999999876 7999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHH
Q 003103 499 AETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIV 578 (847)
Q Consensus 499 ~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV 578 (847)
+++|+.|+++|++++|+|||++.+|..+|+++|| ++|++|+||.++|
T Consensus 353 ~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---------------------------------~~~~~p~~K~~~v 399 (499)
T TIGR01494 353 KETISELREAGIRVIMLTGDNVLTAKAIAKELGI---------------------------------FARVTPEEKAALV 399 (499)
T ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------------------eeccCHHHHHHHH
Confidence 9999999999999999999999999999999986 6889999999999
Q ss_pred HHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003103 579 KRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSIT 658 (847)
Q Consensus 579 ~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n 658 (847)
+.+|++|+.|+|+|||+||+|||++|||||+|+ |+++||++|+++++..++.++.+||++++++++++.|.+++|
T Consensus 400 ~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n 474 (499)
T TIGR01494 400 EALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYN 474 (499)
T ss_pred HHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998 688999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 003103 659 IRIVLGFML 667 (847)
Q Consensus 659 ~~~~~~~~~ 667 (847)
+..++..++
T Consensus 475 ~~~~~~a~~ 483 (499)
T TIGR01494 475 LILIPLAAL 483 (499)
T ss_pred HHHHHHHHH
Confidence 876555443
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-78 Score=665.49 Aligned_cols=795 Identities=21% Similarity=0.247 Sum_probs=523.3
Q ss_pred HHHHHHHcCCCCCCCCH-HHHHHHHhhcCCCccCccccchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHH
Q 003103 24 IEEVFEQLKCSREGLTS-DEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFV 102 (847)
Q Consensus 24 ~~~~~~~l~~~~~GLs~-~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~ 102 (847)
.++.+..++. .+|+.. .|++.-.++||.|....+.+++-..|.+....||+ +|++..+..|.+. .+|++.+
T Consensus 150 ~~~~~g~~~k-~~G~~~~~~i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPfF-VFQVFcvgLWCLD------eyWYySl 221 (1160)
T KOG0209|consen 150 TDEPFGYFQK-STGHEEESEIKLAKHKYGKNKFDIVVPTFSELFKEHAVAPFF-VFQVFCVGLWCLD------EYWYYSL 221 (1160)
T ss_pred cCCcchhhhh-ccCcchHHHHHHHHHHhcCCccccCCccHHHHHHHhccCcee-eHhHHhHHHHHhH------HHHHHHH
Confidence 3443333332 357764 34444455699999999999998889999999995 4555555555553 5888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcC---CCeeccceEEEeeCce
Q 003103 103 GIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKL---GDIVPADARLLEGDPL 179 (847)
Q Consensus 103 ~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~---G~~vPaD~~ll~g~~~ 179 (847)
+-+++++....--..|+.++-+.++. +...+..+.|+|+++|+.+.++||.|||+|.+.. ...||||.++++| +|
T Consensus 222 FtLfMli~fE~tlV~Qrm~~lse~R~-Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~G-sc 299 (1160)
T KOG0209|consen 222 FTLFMLIAFEATLVKQRMRTLSEFRT-MGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRG-SC 299 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEec-ce
Confidence 87776666555445566665544443 3345668899999999999999999999999976 6689999999999 68
Q ss_pred EEEeccccCCCceeecCCC-----------------Cccccceeeee-------------ceEEEEEEeccchhHhhhHH
Q 003103 180 KIDQSALTGESLPVTKNPY-----------------DEVFSGSTCKQ-------------GEIEAVVIATGVHTFFGKAA 229 (847)
Q Consensus 180 ~Vdes~LTGEs~pv~K~~~-----------------~~v~~Gt~v~~-------------G~~~~~V~~tG~~T~~g~i~ 229 (847)
.|||+||||||.|..|.+- ..+|.||.+++ |-+.+.|++||.+|..|++.
T Consensus 300 iVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLv 379 (1160)
T KOG0209|consen 300 IVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLV 379 (1160)
T ss_pred eechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCcee
Confidence 9999999999999999762 36899999986 55999999999999999988
Q ss_pred Hhhhc-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc------cchHhHHHHHHHHHHHhhcCchhHHHHHHH
Q 003103 230 HLVDS-TNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQH------RKYRDGIDNLLVLLIGGIPIAMPTVLSVTM 302 (847)
Q Consensus 230 ~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~ 302 (847)
+.+-. +++.+.-.+. .+ +++.+++++.++ ...|.+.. ++-...+..+..++...+|+.||+-++++.
T Consensus 380 Rtilf~aervTaNn~E--tf--~FILFLlVFAia--Aa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSmAV 453 (1160)
T KOG0209|consen 380 RTILFSAERVTANNRE--TF--IFILFLLVFAIA--AAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSMAV 453 (1160)
T ss_pred eeEEecceeeeeccHH--HH--HHHHHHHHHHHH--hhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhHHH
Confidence 76544 3333321111 11 111111111111 12232221 223344566777888999999999999999
Q ss_pred HHHHHHhhcCCceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeeccc-------CCChHHHHHHHHHhc----
Q 003103 303 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAK-------GVEKEHVILLAARAS---- 371 (847)
Q Consensus 303 ~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~-------~~~~~~~l~~~~~~~---- 371 (847)
-.+...|+|.+++|..|-.+.-.|+||+.|||||||||+..|.|..+.-..... ..+.+.+..+|+..+
T Consensus 454 NsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~l 533 (1160)
T KOG0209|consen 454 NSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVLL 533 (1160)
T ss_pred HHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999998754210000 112223333333222
Q ss_pred -cccCcchHHHHHHHhcCChHHH----------hccceEEEeecCCCCCcceEEEEEcCC----CcEEEEEcCcHHHHHH
Q 003103 372 -RTENQDAIDAAIVGMLADPKEA----------RAGVREVHFLPFNPVDKRTALTYIDSD----GNWHRASKGAPEQILA 436 (847)
Q Consensus 372 -~~~~~~~~~~ai~~~~~~~~~~----------~~~~~~~~~~pf~s~~k~~~v~~~~~~----g~~~~~~KGa~e~i~~ 436 (847)
..-.+||++.|.++..+...+. ....++.+.+.|+|.-|||+++..... -+++..+|||||.|.+
T Consensus 534 e~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ 613 (1160)
T KOG0209|consen 534 EDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQE 613 (1160)
T ss_pred cCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHH
Confidence 1224699999999887422111 124667888999999999999875321 3688899999999998
Q ss_pred hcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCC--------CCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhC
Q 003103 437 LCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPE--------KTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNL 508 (847)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~--------~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~a 508 (847)
+.. +.++.+++...+++++|.||+|++||+++. -.+++.|++|+|.|++.|..|+|+|++++|++|+++
T Consensus 614 ml~---dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~S 690 (1160)
T KOG0209|consen 614 MLR---DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNS 690 (1160)
T ss_pred HHH---hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhcc
Confidence 765 568889999999999999999999999873 236789999999999999999999999999999999
Q ss_pred CCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC-------------------Cc-c-------------------cCccccc
Q 003103 509 GVNVKMITGDQLAIGKETGRRLGMGTNMYPS-------------------SS-L-------------------LGQDKDA 549 (847)
Q Consensus 509 GI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~-------------------~~-~-------------------~~~~~~~ 549 (847)
+++++||||||+.||.++|+++||..+..+. .. + +|...+.
T Consensus 691 SH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~ 770 (1160)
T KOG0209|consen 691 SHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDH 770 (1160)
T ss_pred CceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHH
Confidence 9999999999999999999999996531100 00 0 0111110
Q ss_pred cCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHH------------
Q 003103 550 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAA------------ 617 (847)
Q Consensus 550 ~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a------------ 617 (847)
....+.+.+++.++.||||+.|.||..++..||+.|+.++|||||.||++|||+||||||+=+++.-+
T Consensus 771 l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~e~~~~~~~~~~~k~ 850 (1160)
T KOG0209|consen 771 LQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPEESKKDKEKRRKKKL 850 (1160)
T ss_pred HhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCChhhhhHHhhhhhhcc
Confidence 11122445566778899999999999999999999999999999999999999999999984322200
Q ss_pred -----------------------------------------------------------hhccCEEEcCCChhhHHHHHH
Q 003103 618 -----------------------------------------------------------RSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 618 -----------------------------------------------------------~~aaDivl~~~~~~~i~~~i~ 638 (847)
.-||.+.-.-.+.+++-+.|+
T Consensus 851 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~IIr 930 (1160)
T KOG0209|consen 851 KLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHIIR 930 (1160)
T ss_pred ccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHHHH
Confidence 001111112235778889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHhhhhhcccccCCCCC-----CCCCCcccHHH
Q 003103 639 TSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKP-----SPQPDSWKLKE 713 (847)
Q Consensus 639 ~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~~~-----~~~~~~~~~~~ 713 (847)
.||++.-+.-+.... +.-|-.+..........-+.-|...|...-.++.....+.++-.++-. +|.|+-.+.-
T Consensus 931 QGRctLVtTlQMfKI-LALN~LisAYslSvlyldGVKfgD~QaTisGlLla~cFlfISrskPLetLSkeRP~~nIFN~Y- 1008 (1160)
T KOG0209|consen 931 QGRCTLVTTLQMFKI-LALNCLISAYSLSVLYLDGVKFGDTQATISGLLLAACFLFISRSKPLETLSKERPLPNIFNVY- 1008 (1160)
T ss_pred hcchhHHHHHHHHHH-HHHHHHHHHHHHHHhhhcCceecchhHhHHHHHHHHHHhheecCCchhhHhhcCCCCCcchHH-
Confidence 999987765554332 223322211222222233456777787777776655444443333211 2223222111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccC--CChhHHHHHHHHHHHHHHHHHhhhhccCCCCc----ccc
Q 003103 714 IFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLR--TRPDEMMAALYLQVSIISQALIFVTRSRSWSF----IER 787 (847)
Q Consensus 714 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~----~~~ 787 (847)
++. + +.+-+..-+..++|........-+...+. +.+ =.+.-..|..| .+++.++...|.+...+.++ ++|
T Consensus 1009 ~i~-s-vl~QFaVH~~tLvYi~~~a~~~~p~~~~v-dl~~~F~PsllNt~vy-iisl~~QvsTFAVNY~G~PF~Esl~eN 1084 (1160)
T KOG0209|consen 1009 IIL-S-VLLQFAVHIATLVYITGEAYKLEPPEEKV-DLEEKFSPSLLNTTVY-IISLAQQVSTFAVNYQGRPFRESLREN 1084 (1160)
T ss_pred HHH-H-HHHHHHHHHHHhhhhHHHHHhcCCccccc-ChhcccChhhhhhHHH-HHHHHHHHHHhhhhccCcchhhhhhhc
Confidence 111 1 11112222222333322211111110000 000 01223456665 45778888888888877544 334
Q ss_pred chHHHHHHHHHHHHHHHHhhhc-cccccccccccccC------hhhHHHHHHHHhhhHHHHHHhh
Q 003103 788 PGLLLATAFVIAQLVRVHFHLT-NLNTTIHMGSSFVS------VHDFSWYLFIETSSLSEMMHLF 845 (847)
Q Consensus 788 ~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~------~~~~~~~l~i~~~~f~~~~~~~ 845 (847)
+ .++.+++.+..+.+.+..- .+.....|+..+++ +..|..+=+++.-..|+.++++
T Consensus 1085 K--~l~y~ll~~~~~~~~l~tg~~peLn~~~~lV~mp~~fk~~ll~~l~lD~v~c~~~er~~~f~ 1147 (1160)
T KOG0209|consen 1085 K--GLLYGLLGSAGVIIALATGSSPELNEKFELVDMPQDFKIKLLAVLVLDFVLCYLVERVLKFF 1147 (1160)
T ss_pred c--chHHHHHHHHHHHHHHHhccChhHHhheeeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 4555555544443333332 22222234434443 2233333344444578888775
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-77 Score=694.12 Aligned_cols=519 Identities=26% Similarity=0.366 Sum_probs=433.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECC-eEEEEeCCCCCC
Q 003103 77 VMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDG-RWSEQDASILVP 155 (847)
Q Consensus 77 ~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg-~~~~I~~~~Lv~ 155 (847)
++.++++++++.+ .|.++..++++++++..++.++++|+++.+++|.+..+++++|+||| ++++|++++|+|
T Consensus 4 l~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~ 76 (556)
T TIGR01525 4 LMALATIAAYAMG-------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQV 76 (556)
T ss_pred HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCC
Confidence 3445556666665 78899999999999999999999999999999999999999999996 999999999999
Q ss_pred CcEEEEcCCCeeccceEEEeeCceEEEeccccCCCceeecCCCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhcc
Q 003103 156 GDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 235 (847)
Q Consensus 156 GDiV~l~~G~~vPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 235 (847)
||+|.+++||+|||||+|++| .+.||||+|||||.|+.|++|+.+|+||.+.+|+++++|++||.+|++|++.++++++
T Consensus 77 GDiv~v~~G~~iP~Dg~vi~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~ 155 (556)
T TIGR01525 77 GDIVIVRPGERIPVDGVVISG-ESEVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEA 155 (556)
T ss_pred CCEEEECCCCEeccceEEEec-ceEEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHH
Confidence 999999999999999999999 5799999999999999999999999999999999999999999999999999988776
Q ss_pred C-CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCc
Q 003103 236 N-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 314 (847)
Q Consensus 236 ~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~i 314 (847)
+ +++++++.+++++.++...++++.++.+++++. .... .++..++++++++|||+||+++++++..+..+++++|+
T Consensus 156 ~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~-~~~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gi 232 (556)
T TIGR01525 156 QSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLA-LGAL--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGI 232 (556)
T ss_pred hhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCc
Confidence 4 678999999999888665544433333333222 2222 77889999999999999999999999999999999999
Q ss_pred eeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccCCC--hHHHHHHHHHhccccCcchHHHHHHHhcCChHH
Q 003103 315 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVE--KEHVILLAARASRTENQDAIDAAIVGMLADPKE 392 (847)
Q Consensus 315 lvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~ 392 (847)
++|+++++|++|++|++|||||||||+|+|+|.++... .+.+ +++++.+++.++... .||++.|+++++.....
T Consensus 233 lvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---~~~~~~~~~~l~~a~~~e~~~-~hp~~~Ai~~~~~~~~~ 308 (556)
T TIGR01525 233 LIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPL---DDASISEEELLALAAALEQSS-SHPLARAIVRYAKKRGL 308 (556)
T ss_pred eecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEec---CCCCccHHHHHHHHHHHhccC-CChHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999987631 2222 567777776665544 49999999988643211
Q ss_pred Hhccce-EEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecC
Q 003103 393 ARAGVR-EVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIP 471 (847)
Q Consensus 393 ~~~~~~-~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~ 471 (847)
.... + ..+++| . +..... .+|. ..+..|+++.+ + ... .+ .+..++.++.+.++|+|+++++.+.
T Consensus 309 ~~~~-~~~~~~~~---~-~gi~~~---~~g~-~~~~lg~~~~~-~-~~~-~~-~~~~~~~~~~~~~~g~~~~~v~~~~-- 373 (556)
T TIGR01525 309 ELPK-QEDVEEVP---G-KGVEAT---VDGQ-EEVRIGNPRLL-E-LAA-EP-ISASPDLLNEGESQGKTVVFVAVDG-- 373 (556)
T ss_pred Cccc-ccCeeEec---C-CeEEEE---ECCe-eEEEEecHHHH-h-hcC-CC-chhhHHHHHHHhhCCcEEEEEEECC--
Confidence 0000 1 111221 1 111111 1342 24557888876 2 111 11 1223455667888999999999754
Q ss_pred CCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCcccccc
Q 003103 472 EKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLG-VNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDAS 550 (847)
Q Consensus 472 ~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aG-I~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~ 550 (847)
+++|.+.++|++|||++++|++|+++| +++.|+|||+..++.++++++|+..
T Consensus 374 -----------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~---------------- 426 (556)
T TIGR01525 374 -----------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE---------------- 426 (556)
T ss_pred -----------EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe----------------
Confidence 899999999999999999999999999 9999999999999999999999842
Q ss_pred CCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCCh
Q 003103 551 IAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGL 630 (847)
Q Consensus 551 ~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~ 630 (847)
+|+++.|++|.++++.+|+.++.|+|+|||.||++|+++||||+++|++++.+++.||+++.++++
T Consensus 427 --------------~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~ 492 (556)
T TIGR01525 427 --------------VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDL 492 (556)
T ss_pred --------------eeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCH
Confidence 689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003103 631 SVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 666 (847)
Q Consensus 631 ~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~ 666 (847)
+.+++++++||++++|+++++.|++.+|+..++..+
T Consensus 493 ~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~ 528 (556)
T TIGR01525 493 SSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAA 528 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999987654443
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-77 Score=692.82 Aligned_cols=500 Identities=30% Similarity=0.410 Sum_probs=425.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCC
Q 003103 77 VMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPG 156 (847)
Q Consensus 77 ~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~G 156 (847)
++.++++++++.+ +|.++.+++++++++..++.++++|+++.+++|.+..+++++|+|||+++++++++|+||
T Consensus 4 l~~~a~~~~~~~~-------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~G 76 (536)
T TIGR01512 4 LMALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVG 76 (536)
T ss_pred HHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCC
Confidence 4556677777765 789999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCCeeccceEEEeeCceEEEeccccCCCceeecCCCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhccC
Q 003103 157 DVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN 236 (847)
Q Consensus 157 DiV~l~~G~~vPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~ 236 (847)
|+|.+++||+|||||++++| .+.||||+|||||.|+.|++||.+|+||.+.+|+++++|++||.+|.+|++.+++++++
T Consensus 77 Div~v~~G~~iP~Dg~ii~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~ 155 (536)
T TIGR01512 77 DVVVVKPGERVPVDGVVLSG-TSTVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQ 155 (536)
T ss_pred CEEEEcCCCEeecceEEEeC-cEEEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHh
Confidence 99999999999999999999 57999999999999999999999999999999999999999999999999999888764
Q ss_pred -CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCce
Q 003103 237 -QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 315 (847)
Q Consensus 237 -~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~il 315 (847)
+++++++.+++++.++...++++.++.+++++... .+..++.+++++++++|||+||+++++++..+..+++++|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gil 233 (536)
T TIGR01512 156 SRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK--RWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGIL 233 (536)
T ss_pred hCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeE
Confidence 67899999999998866555443443333333222 233378889999999999999999999999999999999999
Q ss_pred eccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccCCChHHHHHHHHHhccccCcchHHHHHHHhcCChHHHhc
Q 003103 316 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARA 395 (847)
Q Consensus 316 vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~ 395 (847)
+|+++++|++|++|++|||||||||+|+|++.++.. .+++.+++..+. ...||++.|+++++.+..
T Consensus 234 ik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~---------~~~l~~a~~~e~-~~~hp~~~Ai~~~~~~~~---- 299 (536)
T TIGR01512 234 IKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVP---------AEVLRLAAAAEQ-ASSHPLARAIVDYARKRE---- 299 (536)
T ss_pred EcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeH---------HHHHHHHHHHhc-cCCCcHHHHHHHHHHhcC----
Confidence 999999999999999999999999999999988642 256666665444 345999999998764321
Q ss_pred cceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCC
Q 003103 396 GVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK 475 (847)
Q Consensus 396 ~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~ 475 (847)
.....+.+|. + .... ..+|+. +..|+++.+.+.. .+.+..+|.+++.++.+.
T Consensus 300 ~~~~~~~~~g---~-gi~~---~~~g~~--~~ig~~~~~~~~~-------------~~~~~~~~~~~~~v~~~~------ 351 (536)
T TIGR01512 300 NVESVEEVPG---E-GVRA---VVDGGE--VRIGNPRSLEAAV-------------GARPESAGKTIVHVARDG------ 351 (536)
T ss_pred CCcceEEecC---C-eEEE---EECCeE--EEEcCHHHHhhcC-------------CcchhhCCCeEEEEEECC------
Confidence 1222222221 1 1111 124543 3468887654311 014566788888776543
Q ss_pred CCCCCCceEEEEecccCCCCcchHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcc
Q 003103 476 ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAAL 554 (847)
Q Consensus 476 ~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI-~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~ 554 (847)
.+.|.+.++|++|||++++|++|+++|+ ++.|+|||+..+|..+++++|+..
T Consensus 352 -------~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~-------------------- 404 (536)
T TIGR01512 352 -------TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE-------------------- 404 (536)
T ss_pred -------EEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh--------------------
Confidence 8999999999999999999999999999 999999999999999999999842
Q ss_pred hHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecc-cccHHHhhccCEEEcCCChhhH
Q 003103 555 PVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVI 633 (847)
Q Consensus 555 ~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg-~g~~~a~~aaDivl~~~~~~~i 633 (847)
+|+++.|++|.++++.++++++.|+|+|||.||++|+++||+||++| +|++.++++||+++.+++++.+
T Consensus 405 ----------~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l 474 (536)
T TIGR01512 405 ----------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRL 474 (536)
T ss_pred ----------hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHH
Confidence 58899999999999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003103 634 ISAVLTSRAIFQRMKNYTIYAVSITIRIVLGF 665 (847)
Q Consensus 634 ~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~ 665 (847)
.+++.+||++++|+++++.|++.+|+..++..
T Consensus 475 ~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a 506 (536)
T TIGR01512 475 PQAIRLARRTRRIVKQNVVIALGIILLLILLA 506 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999997655443
|
. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-76 Score=688.34 Aligned_cols=506 Identities=26% Similarity=0.377 Sum_probs=423.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEC-CeEEEEeCCCCCCCcEEEEcCCCeeccceEEEe
Q 003103 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD-GRWSEQDASILVPGDVISIKLGDIVPADARLLE 175 (847)
Q Consensus 97 ~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rd-g~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~ 175 (847)
+|.....+++++.++..++.+.++|+++.+++|++..|.+++++|+ |++++|++++|+|||+|.|++||+|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 4445555677788888999999999999999999999999999985 677999999999999999999999999999999
Q ss_pred eCceEEEeccccCCCceeecCCCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhccC-CCCchHHHHHHHHHHHHH
Q 003103 176 GDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCIC 254 (847)
Q Consensus 176 g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~~~ 254 (847)
| .+.||||+|||||.|+.|++||.+|+||.+.+|.++++|+++|.+|.+||+.+++++++ +++++++..++++++++.
T Consensus 133 g-~~~vdes~lTGEs~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~ 211 (562)
T TIGR01511 133 G-ESEVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVP 211 (562)
T ss_pred C-ceEEehHhhcCCCCcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 9 57899999999999999999999999999999999999999999999999999998764 678999999999988765
Q ss_pred HHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceeccchhhhhcCCeEEEEec
Q 003103 255 SIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 334 (847)
Q Consensus 255 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~D 334 (847)
.+++..++. ++.| ..++.+++++++++|||+|++++|+++..+..+++++|+++|+++++|+|+++|++|||
T Consensus 212 ~v~~~a~~~-~~~~-------~~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fD 283 (562)
T TIGR01511 212 VVIAIALIT-FVIW-------LFALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFD 283 (562)
T ss_pred HHHHHHHHH-HHHH-------HHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEEC
Confidence 544433322 2222 24788899999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCceEEEEEeeeecccCCChHHHHHHHHHhccccCcchHHHHHHHhcCChHHHhccceEEEeecCCCCCcceEE
Q 003103 335 KTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTAL 414 (847)
Q Consensus 335 KTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~s~~k~~~v 414 (847)
||||||+|+|++.++.. ..+.++++++.+++..+..++ ||++.|+++++.............+.+|- +....
T Consensus 284 KTGTLT~g~~~v~~i~~---~~~~~~~~~l~~aa~~e~~s~-HPia~Ai~~~~~~~~~~~~~~~~~~~~~g----~Gi~~ 355 (562)
T TIGR01511 284 KTGTLTQGKPTVTDVHV---FGDRDRTELLALAAALEAGSE-HPLAKAIVSYAKEKGITLVEVSDFKAIPG----IGVEG 355 (562)
T ss_pred CCCCCcCCCEEEEEEec---CCCCCHHHHHHHHHHHhccCC-ChHHHHHHHHHHhcCCCcCCCCCeEEECC----ceEEE
Confidence 99999999999998753 224556778888777665554 99999999876422110111122222221 11111
Q ss_pred EEEcCCCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCC
Q 003103 415 TYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPP 494 (847)
Q Consensus 415 ~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~l 494 (847)
. .+| ..+..|+++.+.+... + +.++.++|.+++.++... +++|.+.++|++
T Consensus 356 ~---~~g--~~~~iG~~~~~~~~~~---~--------~~~~~~~g~~~~~~~~~~-------------~~~g~~~~~d~l 406 (562)
T TIGR01511 356 T---VEG--TKIQLGNEKLLGENAI---K--------IDGKAEQGSTSVLVAVNG-------------ELAGVFALEDQL 406 (562)
T ss_pred E---ECC--EEEEEECHHHHHhCCC---C--------CChhhhCCCEEEEEEECC-------------EEEEEEEecccc
Confidence 1 244 3456799998654211 1 112346899999887654 899999999999
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhH
Q 003103 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574 (847)
Q Consensus 495 r~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK 574 (847)
|||++++|++||+.|++++|+|||+..++..+++++|+. +|+++.|++|
T Consensus 407 ~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~K 455 (562)
T TIGR01511 407 RPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-------------------------------VRAEVLPDDK 455 (562)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------EEccCChHHH
Confidence 999999999999999999999999999999999999982 4788899999
Q ss_pred HHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 003103 575 YEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 654 (847)
Q Consensus 575 ~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~ 654 (847)
.++++.+|++++.|+|+|||.||+||+++||+||+||.|++.++++||+++.+++++.+++++++||+++++|++|+.|+
T Consensus 456 ~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a 535 (562)
T TIGR01511 456 AALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWA 535 (562)
T ss_pred HHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCccHH
Q 003103 655 VSITIRIVLGFMLIALIWKFDFSPF 679 (847)
Q Consensus 655 ~~~n~~~~~~~~~~~~~~~~~~~~~ 679 (847)
+.+|+..++..+.....+++.++|+
T Consensus 536 ~~~n~~~i~la~~~~~~~g~~~~p~ 560 (562)
T TIGR01511 536 FGYNVIAIPIAAGVLYPIGILLSPA 560 (562)
T ss_pred HHHHHHHHHHHHhhhhccccccCCC
Confidence 9999876665555544444445553
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-75 Score=710.90 Aligned_cols=521 Identities=24% Similarity=0.303 Sum_probs=435.7
Q ss_pred hhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEee
Q 003103 98 WQD-FVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (847)
Q Consensus 98 ~~~-~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g 176 (847)
|++ +..+++++.++..++.+.+.|+.+.+++|.++.|++++++|||++++|+.++|+|||+|.|++||+|||||+|++|
T Consensus 285 ~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g 364 (834)
T PRK10671 285 YYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG 364 (834)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEc
Confidence 444 5667888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEeccccCCCceeecCCCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhccC-CCCchHHHHHHHHHHHHHH
Q 003103 177 DPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICS 255 (847)
Q Consensus 177 ~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 255 (847)
...||||+|||||.|+.|++||.+|+||.+.+|.+.++|+++|.+|.+|+|.+++++++ +++++++..++++.+++.+
T Consensus 365 -~~~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~ 443 (834)
T PRK10671 365 -EAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPV 443 (834)
T ss_pred -eEEEeehhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999998774 6788999999999886655
Q ss_pred HHHHHHHHHHhhhhcccc--chHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceeccchhhhhcCCeEEEEe
Q 003103 256 IAVGIVAEIIIMYPVQHR--KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCS 333 (847)
Q Consensus 256 i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~ 333 (847)
++++.++.++ .|...+. .+...+..++++++++|||+|++++|+++..+..+++|+|+++|+++++|+++++|++||
T Consensus 444 v~~~a~~~~~-~~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~f 522 (834)
T PRK10671 444 VVVIALVSAA-IWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVF 522 (834)
T ss_pred HHHHHHHHHH-HHHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEE
Confidence 4443333222 2322222 255678889999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccccCceEEEEEeeeecccCCChHHHHHHHHHhccccCcchHHHHHHHhcCChHHHhccceEEEeecCCCCCcceE
Q 003103 334 DKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTA 413 (847)
Q Consensus 334 DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~s~~k~~~ 413 (847)
|||||||+|+|+|.+... ..+.++++++.+++..+..++ ||++.|+++++.+.. .... .+|.....+ .
T Consensus 523 DKTGTLT~g~~~v~~~~~---~~~~~~~~~l~~a~~~e~~s~-hp~a~Ai~~~~~~~~--~~~~-----~~~~~~~g~-G 590 (834)
T PRK10671 523 DKTGTLTEGKPQVVAVKT---FNGVDEAQALRLAAALEQGSS-HPLARAILDKAGDMT--LPQV-----NGFRTLRGL-G 590 (834)
T ss_pred cCCCccccCceEEEEEEc---cCCCCHHHHHHHHHHHhCCCC-CHHHHHHHHHHhhCC--CCCc-----ccceEecce-E
Confidence 999999999999987652 224566777777776665544 999999988754210 0111 122222111 1
Q ss_pred EEEEcCCCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCC
Q 003103 414 LTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDP 493 (847)
Q Consensus 414 v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~ 493 (847)
+... .+|+ .+.+|+++.+.+.... .+.+.+.++++.++|.+++.++++. .++|++.++|+
T Consensus 591 v~~~-~~g~--~~~~G~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~~~l~d~ 650 (834)
T PRK10671 591 VSGE-AEGH--ALLLGNQALLNEQQVD----TKALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDP 650 (834)
T ss_pred EEEE-ECCE--EEEEeCHHHHHHcCCC----hHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEccCc
Confidence 1111 2453 3567999987542211 2345566778889999999999865 79999999999
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhh
Q 003103 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (847)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~q 573 (847)
+||+++++|++|++.|+++.|+|||+..+|..+++++||.. +|+++.|++
T Consensus 651 ~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~------------------------------~~~~~~p~~ 700 (834)
T PRK10671 651 LRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE------------------------------VIAGVLPDG 700 (834)
T ss_pred chhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE------------------------------EEeCCCHHH
Confidence 99999999999999999999999999999999999999842 689999999
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHH
Q 003103 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 653 (847)
Q Consensus 574 K~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~ 653 (847)
|.++++.+|++|+.|+|+|||.||+|||++||+||+||+|++.++++||+++++++++.|.+++++||++++||++|+.|
T Consensus 701 K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~ 780 (834)
T PRK10671 701 KAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLG 780 (834)
T ss_pred HHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHh-hcCCccHHHHH
Q 003103 654 AVSITIRIVLGFMLIALI-WKFDFSPFMVL 682 (847)
Q Consensus 654 ~~~~n~~~~~~~~~~~~~-~~~~~~~~~~l 682 (847)
++.+|+..++..++.+.. .++.++|+.-.
T Consensus 781 a~~yn~~~i~~a~g~~~p~~g~~l~p~~a~ 810 (834)
T PRK10671 781 AFIYNSLGIPIAAGILWPFTGTLLNPVVAG 810 (834)
T ss_pred HHHHHHHHHHHHHhchhhhhhcccCHHHHH
Confidence 999998766544432221 23346776543
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-77 Score=705.67 Aligned_cols=683 Identities=18% Similarity=0.227 Sum_probs=512.5
Q ss_pred HHhhcCCCccCccccchH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 003103 46 RLHVFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENN 121 (847)
Q Consensus 46 r~~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~ 121 (847)
+.++|-.|.+.+.|++.+ +.+++||.++.+++|++.++++++.. . +...|...+.+++++.++++-+.++++|
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~-~--~~~~~~~~~pl~~vl~~t~iKd~~eD~r 104 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIPL-S--PFNPYTTLVPLLFVLGITAIKDAIEDYR 104 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCcc-c--ccCccceeeceeeeehHHHHHHHHhhhh
Confidence 556999999999998764 78899999999999999999998862 2 3345667777888889999999999999
Q ss_pred HHHHHHHHhhcCCCeEEEEECCe-EEEEeCCCCCCCcEEEEcCCCeeccceEEEeeC----ceEEEeccccCCCceeecC
Q 003103 122 AGNAAAALMANLAPKTKVLRDGR-WSEQDASILVPGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVTKN 196 (847)
Q Consensus 122 ~~~~~~~l~~~~~~~~~V~rdg~-~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~----~~~Vdes~LTGEs~pv~K~ 196 (847)
+++...+ .+..++.|.|++. +++..|++|++||+|++..++.+|||.++++++ .|+|++++|+||++.+.|+
T Consensus 105 R~~~D~~---iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~ 181 (1151)
T KOG0206|consen 105 RHKQDKE---VNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQ 181 (1151)
T ss_pred hhhccHH---hhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceee
Confidence 8877644 4678899998644 899999999999999999999999999999764 4999999999999999885
Q ss_pred CC-----------------------------------------------Cccccceeeeece-EEEEEEeccchhHhhhH
Q 003103 197 PY-----------------------------------------------DEVFSGSTCKQGE-IEAVVIATGVHTFFGKA 228 (847)
Q Consensus 197 ~~-----------------------------------------------~~v~~Gt~v~~G~-~~~~V~~tG~~T~~g~i 228 (847)
.- ++++.|+++.+++ +.++|+.||++|++++-
T Consensus 182 ~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n 261 (1151)
T KOG0206|consen 182 ALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQN 261 (1151)
T ss_pred ehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHh
Confidence 31 2467788888775 89999999999987653
Q ss_pred HHhhhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHh--hhhcc---c--------c-----chHhHHHHHHHHHHHhh
Q 003103 229 AHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIII--MYPVQ---H--------R-----KYRDGIDNLLVLLIGGI 290 (847)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~---~--------~-----~~~~~~~~~~~ll~~~i 290 (847)
. -..+.+++.+++.++.....+++..+..+++..+. .|... . . .....+..++.++...+
T Consensus 262 ~--~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~li 339 (1151)
T KOG0206|consen 262 S--GKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLI 339 (1151)
T ss_pred c--CCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceE
Confidence 2 22334777888888887655433332222221111 11110 0 0 01123455667778899
Q ss_pred cCchhHHHHHHHHHHHHHh------h----cCCceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccCCCh
Q 003103 291 PIAMPTVLSVTMAIGSHRL------S----QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360 (847)
Q Consensus 291 P~~L~~~~~~~~~~~~~~l------~----~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~ 360 (847)
|.+|++.+.+.....+.-. . ...+.+|+.+..|+||+|++|++|||||||+|.|++.+|.+....++...
T Consensus 340 PISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~ 419 (1151)
T KOG0206|consen 340 PISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNV 419 (1151)
T ss_pred EEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCC
Confidence 9999999999988776322 2 34688999999999999999999999999999999999876432221110
Q ss_pred --------------------------------------------HHHHHHHHHhccc-------------cCcchHHHHH
Q 003103 361 --------------------------------------------EHVILLAARASRT-------------ENQDAIDAAI 383 (847)
Q Consensus 361 --------------------------------------------~~~l~~~~~~~~~-------------~~~~~~~~ai 383 (847)
.+.....+.|+.. ....|.+.|+
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~Al 499 (1151)
T KOG0206|consen 420 TEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAAL 499 (1151)
T ss_pred ChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHH
Confidence 1122333333211 1135778888
Q ss_pred HHhcCCh----------------HHHhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcC-CChHHHH
Q 003103 384 VGMLADP----------------KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCN-CREDVRK 446 (847)
Q Consensus 384 ~~~~~~~----------------~~~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~-~~~~~~~ 446 (847)
+..+.+. ......++.++.++|+|.||||||+++.++|+..++||||+.+|.+++. +.....+
T Consensus 500 V~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e 579 (1151)
T KOG0206|consen 500 VEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLRE 579 (1151)
T ss_pred HHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHH
Confidence 7765321 0014578899999999999999999999999999999999999999998 4556778
Q ss_pred HHHHHHHHHHHccCeEEEEEeeecCCCC-------------------------CCCCCCCceEEEEecccCCCCcchHHH
Q 003103 447 KVHAVIDKFAERGLRSLGVARQEIPEKT-------------------------KESPGAPWQLVGLLPLFDPPRHDSAET 501 (847)
Q Consensus 447 ~~~~~~~~~~~~G~rvl~~a~~~~~~~~-------------------------~~~~e~~l~~lG~i~~~D~lr~~~~~~ 501 (847)
+..+++++|+.+|+|+|++|||++++++ .+.+|+||+++|.+++||+++++|+++
T Consensus 580 ~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPet 659 (1151)
T KOG0206|consen 580 KTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPET 659 (1151)
T ss_pred HHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHH
Confidence 8888999999999999999999998653 235799999999999999999999999
Q ss_pred HHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcc---------------------------------------
Q 003103 502 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL--------------------------------------- 542 (847)
Q Consensus 502 I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~--------------------------------------- 542 (847)
|+.|++||||+||+|||+.+||.+||.+|++..+....-.+
T Consensus 660 I~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 739 (1151)
T KOG0206|consen 660 IAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEK 739 (1151)
T ss_pred HHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcC
Confidence 99999999999999999999999999999997542211000
Q ss_pred ------cCccccccCCcchHHHH---HH--hcCeEEEeChhhHHHHHHHHhhc-CCEEEEEcCCcCChhhhhhcCcceec
Q 003103 543 ------LGQDKDASIAALPVDEL---IE--KADGFAGVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIAV 610 (847)
Q Consensus 543 ------~~~~~~~~~~~~~~~~~---~~--~~~v~ar~sP~qK~~iV~~lq~~-g~~V~miGDG~ND~~aLk~AdVGIam 610 (847)
.|......+++++.... .. +..++||++|.||+.+|+..++. +.++++||||+||++|+++|||||++
T Consensus 740 ~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGI 819 (1151)
T KOG0206|consen 740 PFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGI 819 (1151)
T ss_pred CceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeee
Confidence 00000001111111111 11 34589999999999999999854 89999999999999999999999999
Q ss_pred c--cccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC----ccHHHHHHH
Q 003103 611 A--DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFD----FSPFMVLII 684 (847)
Q Consensus 611 g--~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~~----~~~~~~l~~ 684 (847)
+ +|.+++ .+||+.+.+.+|..-..+ .+||+.|.|+.+++.|.+++|+...+..+++.++.+|. +.++++.+.
T Consensus 820 sG~EGmQAv-msSD~AIaqFrfL~rLLL-VHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~ly 897 (1151)
T KOG0206|consen 820 SGQEGMQAV-MSSDFAIAQFRFLERLLL-VHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLY 897 (1151)
T ss_pred ccchhhhhh-hcccchHHHHHHHhhhhe-eecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEE
Confidence 4 566555 499999977655554433 45999999999999999999999988888888887764 455666666
Q ss_pred HHHh-hhhhcccccCCCCCC-------CC-----C-CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003103 685 AILN-DGTIMTISKDRVKPS-------PQ-----P-DSWKLKEIFATGVVLGSYLAIMTVVFFWLMRK 738 (847)
Q Consensus 685 ~l~~-~~~~~~l~~~~~~~~-------~~-----~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 738 (847)
|++. ..+.+.++.-..+.+ |. + +.....+.++.++..|+++++++|++.+..+.
T Consensus 898 Nv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~~~~~ 965 (1151)
T KOG0206|consen 898 NVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPYLVFE 965 (1151)
T ss_pred eEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeeeHhhhe
Confidence 6654 445566654332221 11 1 11223455666677799999999876666653
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-75 Score=628.01 Aligned_cols=700 Identities=20% Similarity=0.252 Sum_probs=494.3
Q ss_pred HHHhhcCCCccCccccchH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCC-CchhhHHHHHHHHHHHHHHHHHHH
Q 003103 45 HRLHVFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRD-PDWQDFVGIIVLLVINSTISFIEE 119 (847)
Q Consensus 45 ~r~~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~-~~~~~~~~i~~~i~~~~~~~~~~e 119 (847)
.++++|-+|.+...|++.+ ..+++||..++++++++.++.++......+.. .+|...++++.+.++...++.+++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r 153 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKR 153 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 6778899999998887643 45567888888888877777766643333322 245555556666666667777776
Q ss_pred HHHHHHHHHHhhcCCCeEEEE-ECCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEeeC----ceEEEeccccCCCceee
Q 003103 120 NNAGNAAAALMANLAPKTKVL-RDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVT 194 (847)
Q Consensus 120 ~~~~~~~~~l~~~~~~~~~V~-rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~----~~~Vdes~LTGEs~pv~ 194 (847)
+++.+.. +....+++ |||...+ |++++++||+|.++.+++||||.++++.+ +|+|.+..|+||++.+.
T Consensus 154 ~~rd~~~------Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 154 RRRDREL------NSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKL 226 (1051)
T ss_pred HHhhhhh------hhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCccccee
Confidence 6665433 33444554 6776555 99999999999999999999999999542 68999999999999887
Q ss_pred cCC-----------------------------------------------CCccccceeeeeceEEEEEEeccchhHhhh
Q 003103 195 KNP-----------------------------------------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGK 227 (847)
Q Consensus 195 K~~-----------------------------------------------~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~ 227 (847)
|-| .|+++++|.+.+|.+.|+|++||.+|+.
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRs-- 304 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRS-- 304 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHH--
Confidence 744 1579999999999999999999999963
Q ss_pred HHHhhhcc---CCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHH
Q 003103 228 AAHLVDST---NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 304 (847)
Q Consensus 228 i~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~ 304 (847)
.++.. .+.+.++..+|.+.+++.+.+++..++ ++.....+..|...+.+++.++...||.+|-+.+.++..+
T Consensus 305 ---vMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~v--mv~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ 379 (1051)
T KOG0210|consen 305 ---VMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIV--MVAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIV 379 (1051)
T ss_pred ---HhccCCcccccceeeeecccHHHHHHHHHHHHHHH--HHHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhh
Confidence 33333 255667888888888766554442222 2222234677888899999999999999999999999998
Q ss_pred HHHHhhcC----CceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccCCCh--------------------
Q 003103 305 GSHRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK-------------------- 360 (847)
Q Consensus 305 ~~~~l~~~----~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~-------------------- 360 (847)
.+....+. |..+|+.+.-|+||+++++.+|||||||+|+|.+++++......+.+.
T Consensus 380 ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~ 459 (1051)
T KOG0210|consen 380 YSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGK 459 (1051)
T ss_pred HhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCccccc
Confidence 88777664 678999999999999999999999999999999999876432211111
Q ss_pred --------------HHHHHHHHHhcccc----C--------cchHHHHHHHhcC-----------------ChHHHhccc
Q 003103 361 --------------EHVILLAARASRTE----N--------QDAIDAAIVGMLA-----------------DPKEARAGV 397 (847)
Q Consensus 361 --------------~~~l~~~~~~~~~~----~--------~~~~~~ai~~~~~-----------------~~~~~~~~~ 397 (847)
.+.....+.|+... + ..|.+.|++++-+ .+......|
T Consensus 460 ~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~y 539 (1051)
T KOG0210|consen 460 GALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNY 539 (1051)
T ss_pred ccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeE
Confidence 11122223332211 0 1344444443311 111123478
Q ss_pred eEEEeecCCCCCcceEEEEEcC-CCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCC-
Q 003103 398 REVHFLPFNPVDKRTALTYIDS-DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK- 475 (847)
Q Consensus 398 ~~~~~~pf~s~~k~~~v~~~~~-~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~- 475 (847)
++++.+||+|+.|||+++++++ .|+...+.|||+-+|....+. .+++++...+|+++|+|++.+|.|.+++++.
T Consensus 540 qIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~----NdWleEE~gNMAREGLRtLVvakK~Ls~~eye 615 (1051)
T KOG0210|consen 540 QILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY----NDWLEEECGNMAREGLRTLVVAKKVLSEEEYE 615 (1051)
T ss_pred EEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc----chhhhhhhhhhhhhcceEEEEEecccCHHHHH
Confidence 9999999999999999999986 589999999999998876653 5688888999999999999999999986531
Q ss_pred -------------------------CCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc
Q 003103 476 -------------------------ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (847)
Q Consensus 476 -------------------------~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~ 530 (847)
..+|.||+++|+.|.||+++++++.+++.||+|||++||+|||+.+||+.||+..
T Consensus 616 ~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs 695 (1051)
T KOG0210|consen 616 AFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSS 695 (1051)
T ss_pred HHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhc
Confidence 1368999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCccc----------------Cccc-cccCCc-----------chHHHHHHh--cCeEEEeChhhHHHHHHH
Q 003103 531 GMGTNMYPSSSLL----------------GQDK-DASIAA-----------LPVDELIEK--ADGFAGVFPEHKYEIVKR 580 (847)
Q Consensus 531 Gi~~~~~~~~~~~----------------~~~~-~~~~~~-----------~~~~~~~~~--~~v~ar~sP~qK~~iV~~ 580 (847)
++.+......++. ++.. .--+++ +|+-++..+ ..|+||++|+||+++++.
T Consensus 696 ~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~l 775 (1051)
T KOG0210|consen 696 RLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRL 775 (1051)
T ss_pred cceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHH
Confidence 9965322111110 0000 001122 233443333 358999999999999999
Q ss_pred Hhhc-CCEEEEEcCCcCChhhhhhcCcceec-c-cccHHHhhccCEEEcCCChhhHHHHHHH-HHHHHHHHHHHHHHHHH
Q 003103 581 LQER-KHICGMTGDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAVLT-SRAIFQRMKNYTIYAVS 656 (847)
Q Consensus 581 lq~~-g~~V~miGDG~ND~~aLk~AdVGIam-g-~g~~~a~~aaDivl~~~~~~~i~~~i~~-gR~~~~~i~~~i~~~~~ 656 (847)
+|+. |..|+++|||.||+.|+++||+||++ | +|.+ |.-|||+.+ ..|+.+-+++.+ ||..|+|-.+..+|.+-
T Consensus 776 lq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQ-ASLAADfSI--tqF~Hv~rLLl~HGR~SYkrsa~laqfViH 852 (1051)
T KOG0210|consen 776 LQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQ-ASLAADFSI--TQFSHVSRLLLWHGRNSYKRSAKLAQFVIH 852 (1051)
T ss_pred HHHhhCceEEEEcCCCccchheeecccceeeecccccc-cchhccccH--HHHHHHHHHhhccccchHHHHHHHHHHHHh
Confidence 9986 89999999999999999999999999 6 5555 556999999 459999988866 99999999998888765
Q ss_pred HHHHHHHHHHHHH-HhhcCCccHHH----HHHHHHHhhhhhcccccCCCCCC----CCC---------CcccHHHHHHHH
Q 003103 657 ITIRIVLGFMLIA-LIWKFDFSPFM----VLIIAILNDGTIMTISKDRVKPS----PQP---------DSWKLKEIFATG 718 (847)
Q Consensus 657 ~n~~~~~~~~~~~-~~~~~~~~~~~----~l~~~l~~~~~~~~l~~~~~~~~----~~~---------~~~~~~~~~~~~ 718 (847)
....+......+. .++-.|....| +.+..+-+-.+.+++-.|+.-.+ ..| +....+ -|..+
T Consensus 853 RGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYK-tF~iw 931 (1051)
T KOG0210|consen 853 RGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYK-TFFIW 931 (1051)
T ss_pred hhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchh-hhhhh
Confidence 5543332222221 12212333233 22333333344566666653221 011 112223 34444
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccccccCCChhHHHHHHHHHHHHHHHHHh-hhhccC
Q 003103 719 VVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALI-FVTRSR 780 (847)
Q Consensus 719 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~-~~~rs~ 780 (847)
++..++++.+....+++.+...++ ...++.|.++++..++.+ +-++++
T Consensus 932 vLISiYQG~vim~g~~~l~~~ef~--------------~ivaisFtaLi~tELiMVaLtv~tw 980 (1051)
T KOG0210|consen 932 VLISIYQGSVIMYGALLLFDTEFI--------------HIVAISFTALILTELIMVALTVRTW 980 (1051)
T ss_pred hhHHHHcccHHHHHHHHHhhhhhe--------------EeeeeeeHHHHHHHHHHHhhhhhhh
Confidence 555777776665544444332221 223567888887777764 333443
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-65 Score=541.74 Aligned_cols=520 Identities=25% Similarity=0.368 Sum_probs=402.9
Q ss_pred HHHhHHHHHHHHHHHHHHHHh----cCCCCCCchhhHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEE
Q 003103 69 FMWNPLSWVMEAAAIMAIALA----NGGGRDPDWQDFVGIIVL----LVINSTISFIEENNAGNAAAALMANL-APKTKV 139 (847)
Q Consensus 69 ~~~~~~~~~l~~~~il~~~~~----~~~~~~~~~~~~~~i~~~----i~~~~~~~~~~e~~~~~~~~~l~~~~-~~~~~V 139 (847)
+.+||..++.++.++++.++. ..++...++.....+.++ +++..+-+.+.|-|.+...++|++.. ...+++
T Consensus 29 ~~kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~ 108 (681)
T COG2216 29 LVKNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARL 108 (681)
T ss_pred hhhCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Confidence 456887777666666665322 111111222222223333 33334445566666666666666533 336677
Q ss_pred EEC-CeEEEEeCCCCCCCcEEEEcCCCeeccceEEEeeCceEEEeccccCCCceeecCCC---CccccceeeeeceEEEE
Q 003103 140 LRD-GRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY---DEVFSGSTCKQGEIEAV 215 (847)
Q Consensus 140 ~rd-g~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~---~~v~~Gt~v~~G~~~~~ 215 (847)
+++ |.++.+++.+|+.||+|.+++||+||+||.+++| ..+||||.+||||-||.|.+| +.+-.||.+++..++..
T Consensus 109 l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG-~asVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~ir 187 (681)
T COG2216 109 LRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIR 187 (681)
T ss_pred hcCCCCeeeccccccccCCEEEEecCCCccCCCeEEee-eeecchhhccCCCcceeeccCCCcccccCCcEEeeeeEEEE
Confidence 776 8999999999999999999999999999999999 679999999999999999998 67999999999999999
Q ss_pred EEeccchhHhhhHHHhhhccC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc--ccchHhHHHHHHHHHHHhhcC
Q 003103 216 VIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQ--HRKYRDGIDNLLVLLIGGIPI 292 (847)
Q Consensus 216 V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~iP~ 292 (847)
+++...+|.+.|+..+++.++ +++|-+--++.+..-+. ++++++ ..-.|++. ...-...+...++++++.+|-
T Consensus 188 ita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LT---liFL~~-~~Tl~p~a~y~~g~~~~i~~LiALlV~LIPT 263 (681)
T COG2216 188 ITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLT---LIFLLA-VATLYPFAIYSGGGAASVTVLVALLVCLIPT 263 (681)
T ss_pred EEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHH---HHHHHH-HHhhhhHHHHcCCCCcCHHHHHHHHHHHhcc
Confidence 999999999999999998875 56664443333211111 110111 11111111 101112355678899999999
Q ss_pred chhHHHHHHHHHHHHHhhcCCceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccCCChHHHHHHHHHhcc
Q 003103 293 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASR 372 (847)
Q Consensus 293 ~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~ 372 (847)
.+.-.++..-..|+.|+.+.|++.++..++|..|.+|++..|||||+|-|+-.-.++.+ ..+.+.+++...+..++.
T Consensus 264 TIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p---~~gv~~~~la~aa~lsSl 340 (681)
T COG2216 264 TIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIP---VPGVSEEELADAAQLASL 340 (681)
T ss_pred cHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheec---CCCCCHHHHHHHHHHhhh
Confidence 98888877777789999999999999999999999999999999999999876666653 457888888877777665
Q ss_pred ccCcchHHHHHHHhcCChH-HH-hccce-EEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCCCh-HHHHHH
Q 003103 373 TENQDAIDAAIVGMLADPK-EA-RAGVR-EVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCRE-DVRKKV 448 (847)
Q Consensus 373 ~~~~~~~~~ai~~~~~~~~-~~-~~~~~-~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~-~~~~~~ 448 (847)
... .|-..+++..+.+.. +. .+... ..++.||+.+.+++.+-.. ++ ..+.|||.+.+.+..+... ..++.+
T Consensus 341 ~De-TpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~~--~~--~~irKGA~dai~~~v~~~~g~~p~~l 415 (681)
T COG2216 341 ADE-TPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDLP--GG--REIRKGAVDAIRRYVRERGGHIPEDL 415 (681)
T ss_pred ccC-CCCcccHHHHHHHhccCCCcccccccceeeecceecccccccCC--CC--ceeecccHHHHHHHHHhcCCCCCHHH
Confidence 443 555566665543211 11 11111 3578999988776665322 23 5677999999998776433 367888
Q ss_pred HHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH
Q 003103 449 HAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR 528 (847)
Q Consensus 449 ~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~ 528 (847)
+...++-++.|-..++++... +++|.+.++|-+||+.+|-+.+||+.|||++|+||||+.||..||+
T Consensus 416 ~~~~~~vs~~GGTPL~V~~~~-------------~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~ 482 (681)
T COG2216 416 DAAVDEVSRLGGTPLVVVENG-------------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAA 482 (681)
T ss_pred HHHHHHHHhcCCCceEEEECC-------------EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHH
Confidence 999999999999999998765 8999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcce
Q 003103 529 RLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (847)
Q Consensus 529 ~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGI 608 (847)
+.|.++ ..|+++||+|.++|+.-|.+|+.|+|||||.||+|||.+||||+
T Consensus 483 EAGVDd------------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~ 532 (681)
T COG2216 483 EAGVDD------------------------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGV 532 (681)
T ss_pred HhCchh------------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhh
Confidence 999853 47899999999999999999999999999999999999999999
Q ss_pred ecccccHHHhhccCEEEcCCChhhHHHHHHHHHHHH
Q 003103 609 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIF 644 (847)
Q Consensus 609 amg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~ 644 (847)
||.+|+++||||+++|=+|+|-..+.+.++.|++..
T Consensus 533 AMNsGTqAAkEAaNMVDLDS~PTKlievV~IGKqlL 568 (681)
T COG2216 533 AMNSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLL 568 (681)
T ss_pred hhccccHHHHHhhcccccCCCccceehHhhhhhhhe
Confidence 999999999999999999999999999999999863
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=309.46 Aligned_cols=220 Identities=36% Similarity=0.527 Sum_probs=192.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCe-EEEEECCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEe-eCceEE
Q 003103 104 IIVLLVINSTISFIEENNAGNAAAALMANLAPK-TKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLE-GDPLKI 181 (847)
Q Consensus 104 i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~-~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~-g~~~~V 181 (847)
++++++++.++++++++|+++.++++++..+++ ++|+|||++++++++||+|||+|.|++||++||||++++ | .+.|
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g-~~~v 80 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESG-SAYV 80 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESS-EEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecc-cccc
Confidence 567788899999999999999999999888887 999999999999999999999999999999999999999 6 7999
Q ss_pred EeccccCCCceeecC-----CCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhccC-CCCchHHHHHHHHHHHHHH
Q 003103 182 DQSALTGESLPVTKN-----PYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICS 255 (847)
Q Consensus 182 des~LTGEs~pv~K~-----~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 255 (847)
|||.+|||+.|+.|. +++.+|+||.+.+|.+.++|++||.+|..|++.+.....+ +++++++.++++..++...
T Consensus 81 d~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00122_consen 81 DESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIII 160 (230)
T ss_dssp ECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhc
Confidence 999999999999999 9999999999999999999999999999999999887765 4589999999998886655
Q ss_pred HHHHHHHHHHhhhh-ccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceeccchhhhh
Q 003103 256 IAVGIVAEIIIMYP-VQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 324 (847)
Q Consensus 256 i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~ 324 (847)
+++..++.+++.+. ....++...+..++++++.++|++||+++++++..++++|.++|+++|+++++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 161 ILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred ccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 44433333322222 2567788899999999999999999999999999999999999999999999995
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.9e-26 Score=236.37 Aligned_cols=211 Identities=32% Similarity=0.410 Sum_probs=151.1
Q ss_pred eEEEEecCCCccccCceEEEEEeeeecccCCChHHHHHHHHHhccccCcchHHHHHHHhcCChHHHhccceEEEeecCCC
Q 003103 328 MDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNP 407 (847)
Q Consensus 328 v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~s 407 (847)
|++||||||||||+|++.+ . . .+.+.++..+...+..+ .||+..++..+....... ..... |..
T Consensus 1 i~~i~fDktGTLt~~~~~v---~---~---~~~~~~~~~~~~~~~~s-~~p~~~~~~~~~~~~~~~-~~~~~-----~~~ 64 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV---A---P---PSNEAALAIAAALEQGS-EHPIGKAIVEFAKNHQWS-KSLES-----FSE 64 (215)
T ss_dssp ESEEEEECCTTTBESHHEE---E---S---CSHHHHHHHHHHHHCTS-TSHHHHHHHHHHHHHHHH-SCCEE-----EEE
T ss_pred CeEEEEecCCCcccCeEEE---E---e---ccHHHHHHHHHHhhhcC-CCcchhhhhhhhhhccch-hhhhh-----hee
Confidence 6899999999999999999 1 1 34555565555444444 499999988876532221 11111 111
Q ss_pred CCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEE
Q 003103 408 VDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487 (847)
Q Consensus 408 ~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~ 487 (847)
...+...... ++. +. |+++.+.+..... ............+|.+.+.++. ++.++|.
T Consensus 65 ~~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 121 (215)
T PF00702_consen 65 FIGRGISGDV--DGI---YL-GSPEWIHELGIRV----ISPDLVEEIQESQGRTVIVLAV-------------NLIFLGL 121 (215)
T ss_dssp ETTTEEEEEE--HCH---EE-HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCEEEEE-------------SHEEEEE
T ss_pred eeeccccccc--ccc---cc-ccchhhhhccccc----cccchhhhHHHhhCCcccceee-------------cCeEEEE
Confidence 1111111111 122 22 8888877654311 1111222233455666666664 3489999
Q ss_pred ecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEE
Q 003103 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (847)
Q Consensus 488 i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 567 (847)
+.+.|++||+++++|+.|+++|++++|+|||+..+|.++|+++||.. ..+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----------------------------~~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----------------------------SIVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----------------------------EEEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----------------------------ccccc
Confidence 99999999999999999999999999999999999999999999942 23799
Q ss_pred Ee--ChhhH--HHHHHHHhhcCCEEEEEcCCcCChhhhhhcC
Q 003103 568 GV--FPEHK--YEIVKRLQERKHICGMTGDGVNDAPALKKAD 605 (847)
Q Consensus 568 r~--sP~qK--~~iV~~lq~~g~~V~miGDG~ND~~aLk~Ad 605 (847)
++ +|++| .++++.||.+++.|+|+|||+||++|+++||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999977779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.1e-15 Score=132.65 Aligned_cols=124 Identities=25% Similarity=0.383 Sum_probs=107.5
Q ss_pred eEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHh
Q 003103 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEK 562 (847)
Q Consensus 483 ~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (847)
...+.++---++=++++++|++|++. +++++.|||...+-...|.-+||+..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 45677777778889999999999999 99999999999999999999998532
Q ss_pred cCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceec-c--cccHHHhhccCEEEcCCChhhHHHHH
Q 003103 563 ADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-A--DATDAARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 563 ~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIam-g--~g~~~a~~aaDivl~~~~~~~i~~~i 637 (847)
++||..-|+.|.++++.|++++++|.|+|||.||.+||++||+||.. + +.++-+.++||+++. +...+++++
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik--~i~e~ldl~ 146 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK--EIAEILDLL 146 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhh--hHHHHHHHh
Confidence 47999999999999999999999999999999999999999999986 5 456677899999984 344544443
|
|
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.8e-12 Score=128.65 Aligned_cols=166 Identities=15% Similarity=0.196 Sum_probs=114.6
Q ss_pred cCCccHHHHHHHHHHhhhh-hcccccCCCCCC-----CCCC--cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 003103 673 KFDFSPFMVLIIAILNDGT-IMTISKDRVKPS-----PQPD--SWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSD 744 (847)
Q Consensus 673 ~~~~~~~~~l~~~l~~~~~-~~~l~~~~~~~~-----~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 744 (847)
|.|++|+|++|+|+++|.+ ++++++|+++++ |+++ +...++++..++..|+.+++.+++.|++....
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~----- 75 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI----- 75 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS-----
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc-----
Confidence 5689999999999999987 899999998764 2222 22346788888999999999999888877641
Q ss_pred cccccc--cCCChhHHHHHHHHHHHHHHHHHhhhhccCCCCccc----cchHHHHHHHHHHHHHHHHhhhcccccccccc
Q 003103 745 AFGVRS--LRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE----RPGLLLATAFVIAQLVRVHFHLTNLNTTIHMG 818 (847)
Q Consensus 745 ~~~~~~--~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (847)
++... .+....+++|++|.+++++|.++.+++|+++.+.++ +.|++++.+++++.++. ++..|.+.....|+
T Consensus 76 -~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~-~~i~~~P~~~~~f~ 153 (182)
T PF00689_consen 76 -FGWDEETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQ-ILIVYVPGLNRIFG 153 (182)
T ss_dssp -TCSSSHHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHH-HHHHHSTTHHHHST
T ss_pred -cccccccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHH-HHHhcchhhHhhhc
Confidence 11100 001234689999999999999999999996643222 24668888887776664 44445555555699
Q ss_pred ccccChhhHHHHHHHHhhh--HHHHHHhh
Q 003103 819 SSFVSVHDFSWYLFIETSS--LSEMMHLF 845 (847)
Q Consensus 819 ~~~~~~~~~~~~l~i~~~~--f~~~~~~~ 845 (847)
+.++++.+|.+++++.... .+|..|++
T Consensus 154 ~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 154 TAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp ----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999998887766655 89999875
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.40 E-value=5.8e-13 Score=110.41 Aligned_cols=67 Identities=36% Similarity=0.534 Sum_probs=60.7
Q ss_pred cccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCcc-ccchHHHHHHHHHhHHHHHHHHHHHHH
Q 003103 19 LERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEK-KESKVLKFLGFMWNPLSWVMEAAAIMA 85 (847)
Q Consensus 19 ~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~-~~~~~~~~~~~~~~~~~~~l~~~~il~ 85 (847)
||+++.++++++|+++ .+|||++||++|+++||+|.++.+ +++.|+.|+++|.+|+.++|++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 7999999999999966 889999999999999999999655 567789999999999999999999886
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.5e-08 Score=109.42 Aligned_cols=209 Identities=17% Similarity=0.195 Sum_probs=142.7
Q ss_pred ceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCC-----------CCCCcc-------c
Q 003103 482 WQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM-----------YPSSSL-------L 543 (847)
Q Consensus 482 l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~-----------~~~~~~-------~ 543 (847)
-.|.|++....+.|++....|+.|-++-||.+-.|-.+....+-.|.++||.... .|.... .
T Consensus 815 QIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a 894 (1354)
T KOG4383|consen 815 QIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFA 894 (1354)
T ss_pred chhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhh
Confidence 4689999999999999999999999999999999999999999999999995411 111100 0
Q ss_pred Cc-------------ccc--ccCC-----------------------cchHHH-----------------HHHhcCeEEE
Q 003103 544 GQ-------------DKD--ASIA-----------------------ALPVDE-----------------LIEKADGFAG 568 (847)
Q Consensus 544 ~~-------------~~~--~~~~-----------------------~~~~~~-----------------~~~~~~v~ar 568 (847)
++ ++. ..++ +....+ +-.-+..|..
T Consensus 895 ~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTD 974 (1354)
T KOG4383|consen 895 AQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTD 974 (1354)
T ss_pred ccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccC
Confidence 00 000 0000 000000 0001235889
Q ss_pred eChhhHHHHHHHHhhcCCEEEEEcCCcCCh--hhhhhcCcceeccc--c-----------cHH-HhhccC----------
Q 003103 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDA--PALKKADIGIAVAD--A-----------TDA-ARSASD---------- 622 (847)
Q Consensus 569 ~sP~qK~~iV~~lq~~g~~V~miGDG~ND~--~aLk~AdVGIamg~--g-----------~~~-a~~aaD---------- 622 (847)
++|+.--++++.+|++|++|+.+|...|-. --.-+||++|++.. . +.. ..++.|
T Consensus 975 cnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSgq 1054 (1354)
T KOG4383|consen 975 CNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQ 1054 (1354)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeeccc
Confidence 999999999999999999999999998843 34468999998741 1 111 011233
Q ss_pred -------EEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhhcCCccHHHHHHHHHHhhh
Q 003103 623 -------IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM-LIALIWKFDFSPFMVLIIAILNDG 690 (847)
Q Consensus 623 -------ivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~ 690 (847)
+-+....+-++..+|+-+|....-+|+.++|.+.......+..+ ..++++|..++.-+++|...+.-.
T Consensus 1055 LnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~P 1130 (1354)
T KOG4383|consen 1055 LNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIP 1130 (1354)
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHHH
Confidence 22222234466788888999999999999999888775544443 345566777777888888877553
|
|
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.3e-10 Score=92.50 Aligned_cols=60 Identities=43% Similarity=0.708 Sum_probs=53.2
Q ss_pred HcCCCCC-CCCHHHHHHHHhhcCCCccCccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHh
Q 003103 30 QLKCSRE-GLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALA 89 (847)
Q Consensus 30 ~l~~~~~-GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~ 89 (847)
.++++.+ |||++||++|+++||+|+++.++ +++|+.++++|++|+.++|+++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 4667744 99999999999999999999876 778899999999999999999999998753
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.8e-09 Score=108.31 Aligned_cols=131 Identities=15% Similarity=0.117 Sum_probs=96.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
+++|++.+.|+.+|+.| ++.++||-....+..+++++|+.... ......... ..+++. .-..|+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~-an~l~~~~~--g~~tG~------------~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLL-CHKLEIDDS--DRVVGY------------QLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhh-ceeeEEecC--CeeECe------------eecCcc
Confidence 57999999999999975 99999999999999999999996321 111000000 000000 014578
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 640 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~g 640 (847)
+|...++.+++.|..+.|+|||.||.+|++.||+||++.....+.+++-|+-.. .+.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~-~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCcc-cCHHHHHHHHHHH
Confidence 999999999988888999999999999999999999998655555555555333 4577777777654
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=6.9e-09 Score=112.56 Aligned_cols=131 Identities=18% Similarity=0.256 Sum_probs=97.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEE-EeCh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA-GVFP 571 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a-r~sP 571 (847)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+.......-.+..+ .++.. +.. -+..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg----~ltg~----------v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG----KLTGN----------VLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC----EEEeE----------ecCccCCc
Confidence 47899999999999999999999999988888899999985311100000000 00000 000 0234
Q ss_pred hhHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 572 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 572 ~qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
+.|.+.++.+.++ | +.+.++|||.||.+|++.|++|||+ ++.+..++.||.++...++..+..++.
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 6889888888654 3 5688999999999999999999999 788889999999998888988876653
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.86 E-value=9.9e-09 Score=106.15 Aligned_cols=129 Identities=21% Similarity=0.275 Sum_probs=93.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE-eCh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VFP 571 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar-~sP 571 (847)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+.... ....... +..... .+.++ ..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~-~~~~~~~---~~~~~~----------~~~~~~~~~ 150 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAF-ANRLEVE---DGKLTG----------LVEGPIVDA 150 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE-eeEEEEE---CCEEEE----------EecCcccCC
Confidence 57999999999999999999999999999999999999985311 1000000 000000 00111 123
Q ss_pred hhHHHHHHHHhhcC----CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHH
Q 003103 572 EHKYEIVKRLQERK----HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 636 (847)
Q Consensus 572 ~qK~~iV~~lq~~g----~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~ 636 (847)
..|..+++.+.++. ..+.|+||+.||.+|+++|+++++++ +.+..+++||+++.+++|..+...
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 44777777665543 34789999999999999999999986 467788899999999999887654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=4.3e-08 Score=102.17 Aligned_cols=153 Identities=24% Similarity=0.313 Sum_probs=104.8
Q ss_pred EEecccCC-CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC-CCCccc-----Ccc------------
Q 003103 486 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSSLL-----GQD------------ 546 (847)
Q Consensus 486 G~i~~~D~-lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~-~~~~~~-----~~~------------ 546 (847)
|.+.-.|. +.+.+.++|+++++.|+++++.||.....+..+++++|+..... .+..+. +..
T Consensus 12 GTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~ 91 (230)
T PRK01158 12 GTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKA 91 (230)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHH
Confidence 33333444 67899999999999999999999999999999999999853211 000000 000
Q ss_pred -----------------ccc-----------cCCcchHHHHHHhcC--e-------EEEeChhh--HHHHHHHHhhc-C-
Q 003103 547 -----------------KDA-----------SIAALPVDELIEKAD--G-------FAGVFPEH--KYEIVKRLQER-K- 585 (847)
Q Consensus 547 -----------------~~~-----------~~~~~~~~~~~~~~~--v-------~ar~sP~q--K~~iV~~lq~~-g- 585 (847)
... ....+++.+.+++.. + +....|.. |..-++.+.+. |
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i 171 (230)
T PRK01158 92 YSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGI 171 (230)
T ss_pred HHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCC
Confidence 000 000012222222211 1 12344443 77777777654 2
Q ss_pred --CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 586 --HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 586 --~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
..+.++||+.||.+|++.|++|+||+++.+.+|++||+|..+++-.++.++++
T Consensus 172 ~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 172 DPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 35899999999999999999999999999999999999998888888887775
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.3e-08 Score=103.14 Aligned_cols=144 Identities=19% Similarity=0.250 Sum_probs=98.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC-CCCccc-C--------ccccc-------------
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSSLL-G--------QDKDA------------- 549 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~-~~~~~~-~--------~~~~~------------- 549 (847)
++.+++.++|++|++.|+++.+.||.+...+..+++++++..... ....+. . .....
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 478899999999999999999999999999999999999863211 000000 0 00000
Q ss_pred --------------cCCc---chHHHHHHhcCe-------EEEeCh--hhHHHHHHHHhhc-C---CEEEEEcCCcCChh
Q 003103 550 --------------SIAA---LPVDELIEKADG-------FAGVFP--EHKYEIVKRLQER-K---HICGMTGDGVNDAP 599 (847)
Q Consensus 550 --------------~~~~---~~~~~~~~~~~v-------~ar~sP--~qK~~iV~~lq~~-g---~~V~miGDG~ND~~ 599 (847)
..+. +.+.+.+.+..+ +..++| ..|...++.+.+. | ..++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0000 112222222111 112333 4788888877654 3 34899999999999
Q ss_pred hhhhcCcceecccccHHHhhccCEEEcCCChhhHHHH
Q 003103 600 ALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 636 (847)
Q Consensus 600 aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~ 636 (847)
|++.|+.|+||+++.+.+|+.||+|..+++-.++.++
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhh
Confidence 9999999999999999999999999977666666543
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.7e-08 Score=88.42 Aligned_cols=65 Identities=32% Similarity=0.470 Sum_probs=53.8
Q ss_pred CcchHHHHHHHhcC------ChHHHhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCC
Q 003103 375 NQDAIDAAIVGMLA------DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC 440 (847)
Q Consensus 375 ~~~~~~~ai~~~~~------~~~~~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~ 440 (847)
.++|.|.|++.++. +....+..+++++.+||+|++|||+++++ .++.+.+++|||||.|+++|+.
T Consensus 20 ~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 20 IGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred cCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 45889999988763 23456788999999999999999999998 3345677999999999999973
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.1e-07 Score=101.45 Aligned_cols=154 Identities=22% Similarity=0.221 Sum_probs=107.3
Q ss_pred EEecccCC-CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC---------CCCcc-------------
Q 003103 486 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY---------PSSSL------------- 542 (847)
Q Consensus 486 G~i~~~D~-lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~---------~~~~~------------- 542 (847)
|.+.-.|. +.+.+.++|+++++.|+++.+.||.+...+..+.+++|+..... ....+
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 44444444 88999999999999999999999999999999999999964110 00000
Q ss_pred --------------cCcc-----------c-------------------------cccCCcchHHHHH---Hh-----cC
Q 003103 543 --------------LGQD-----------K-------------------------DASIAALPVDELI---EK-----AD 564 (847)
Q Consensus 543 --------------~~~~-----------~-------------------------~~~~~~~~~~~~~---~~-----~~ 564 (847)
.... . ......+...+.. .+ ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 0000 0 0000011112211 11 11
Q ss_pred eE-------EEeCh--hhHHHHHHHHhhc-CCE---EEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChh
Q 003103 565 GF-------AGVFP--EHKYEIVKRLQER-KHI---CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS 631 (847)
Q Consensus 565 v~-------ar~sP--~qK~~iV~~lq~~-g~~---V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~ 631 (847)
.+ -.+.| .+|..-++.+.+. |-. |+++||+.||.+||+.|+.|||||++.+.+|+.||++...++-.
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 22 23333 3788888877763 543 99999999999999999999999999999999999888888888
Q ss_pred hHHHHHHH
Q 003103 632 VIISAVLT 639 (847)
Q Consensus 632 ~i~~~i~~ 639 (847)
++.++++.
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 98888864
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.73 E-value=3.8e-08 Score=96.49 Aligned_cols=100 Identities=19% Similarity=0.261 Sum_probs=79.8
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEe--ChhhHHHH
Q 003103 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV--FPEHKYEI 577 (847)
Q Consensus 500 ~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~--sP~qK~~i 577 (847)
.+|+.|++.|+++.++|+.+...+....+++|+.. .|... .|+--..+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~------------------------------~f~~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR------------------------------FHEGIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE------------------------------EEecCCCCHHHHHHH
Confidence 57999999999999999999999999999999852 11111 23333444
Q ss_pred HHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCC
Q 003103 578 VKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629 (847)
Q Consensus 578 V~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~ 629 (847)
.+.++-....++|+||+.||.+|++.|++++||+++.+..++.||+|..+++
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~ 142 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARG 142 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCC
Confidence 4444333456999999999999999999999999999999999999986544
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.70 E-value=9e-08 Score=93.02 Aligned_cols=97 Identities=28% Similarity=0.403 Sum_probs=77.9
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHH
Q 003103 501 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKR 580 (847)
Q Consensus 501 ~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~ 580 (847)
+|++|++.|+++.++||+....+..+.++.|+... |... ..|.+.++.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~------------------------------~~~~--~~k~~~~~~ 83 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL------------------------------YQGQ--SNKLIAFSD 83 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE------------------------------Eecc--cchHHHHHH
Confidence 89999999999999999999999999999998531 1111 234444444
Q ss_pred Hhh----cCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCC
Q 003103 581 LQE----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629 (847)
Q Consensus 581 lq~----~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~ 629 (847)
+.+ ....+.|+||+.||.+|++.|++++++.++.+..+..||+++..+.
T Consensus 84 ~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 84 ILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAG 136 (154)
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCC
Confidence 432 2356999999999999999999999999888889999999997553
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=6.9e-08 Score=103.30 Aligned_cols=66 Identities=23% Similarity=0.222 Sum_probs=54.6
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
.|..-++.+.+. | ..|+++|||.||.+||+.|+.|+||++|.+.+|++||+|..+++-.++.++|+
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 455555544433 2 35899999999999999999999999999999999999998888888887775
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=1e-07 Score=102.16 Aligned_cols=66 Identities=18% Similarity=0.181 Sum_probs=54.3
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCE--EEcCCChhhHHHHHH
Q 003103 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI--VLTEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDi--vl~~~~~~~i~~~i~ 638 (847)
.|..-++.+.+. | ..|+++|||.||.+||+.|+.||||++|.+.+|++||. |..+++-.++..+|+
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 466666666544 3 35899999999999999999999999999999999996 666777778877774
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.65 E-value=2.3e-07 Score=96.36 Aligned_cols=146 Identities=23% Similarity=0.306 Sum_probs=99.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC-CCCc-c-------------cCc------------
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSS-L-------------LGQ------------ 545 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~-~~~~-~-------------~~~------------ 545 (847)
.+.+.+.++|+++++.|+++++.||.+...+..+.+++|+..... .... + ...
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 477889999999999999999999999999999999999643110 0000 0 000
Q ss_pred --c-------cc----c---cCCcchHHHHHHhcC---------eEEEeCh--hhHHHHHHHHhhc-C---CEEEEEcCC
Q 003103 546 --D-------KD----A---SIAALPVDELIEKAD---------GFAGVFP--EHKYEIVKRLQER-K---HICGMTGDG 594 (847)
Q Consensus 546 --~-------~~----~---~~~~~~~~~~~~~~~---------v~ar~sP--~qK~~iV~~lq~~-g---~~V~miGDG 594 (847)
. .. . ..+.+...++.++.. .+..+.| ..|..-++.+.++ | ..|.++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0 00 0 000111222222211 1223334 3788878777654 3 468999999
Q ss_pred cCChhhhhhcCcceecccccHHHhhccCEEEcCCChhh----HHHHHH
Q 003103 595 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV----IISAVL 638 (847)
Q Consensus 595 ~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~----i~~~i~ 638 (847)
.||.+|++.|++|+||+++.+..|+.||.|..+++-.. +...++
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999987777667 555443
|
catalyze the same reaction as SPP. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.7e-07 Score=100.07 Aligned_cols=66 Identities=20% Similarity=0.227 Sum_probs=53.0
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccC--EEEcCCChhhHHHHHH
Q 003103 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD--IVLTEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaD--ivl~~~~~~~i~~~i~ 638 (847)
.|..-++.+.+. | ..|+++|||.||.+||+.|+.|+||++|.+.+|+.|| .|..+++-.++..+|+
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 355555554433 2 3489999999999999999999999999999999988 6777777778877775
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.7e-07 Score=95.69 Aligned_cols=110 Identities=19% Similarity=0.181 Sum_probs=82.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEe-C
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV-F 570 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~-s 570 (847)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|+.......-....+ .++ -.+.... .
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG----~lt----------G~v~g~~~~ 141 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG----KLT----------GRVVGPICD 141 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC----EEe----------ceeeeeecC
Confidence 678999999999999999999999999999999999999996532111000000 000 1134433 4
Q ss_pred hhhHHHHHHHHhhc-CC---EEEEEcCCcCChhhhhhcCcceecccccH
Q 003103 571 PEHKYEIVKRLQER-KH---ICGMTGDGVNDAPALKKADIGIAVADATD 615 (847)
Q Consensus 571 P~qK~~iV~~lq~~-g~---~V~miGDG~ND~~aLk~AdVGIamg~g~~ 615 (847)
.+.|...++.+.+. |. .+.++|||.||.|||+.|+.++++.....
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~ 190 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPK 190 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHH
Confidence 47899888666553 55 48899999999999999999999985433
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=4e-07 Score=93.08 Aligned_cols=127 Identities=20% Similarity=0.214 Sum_probs=90.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+.... .. .+...+.. .... +.-..|+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f-~~-~~~~~~~~-~i~~------------~~~~~p~ 131 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLF-CH-SLEVDEDG-MITG------------YDLRQPD 131 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhh-cc-eEEECCCC-eEEC------------ccccccc
Confidence 4589999999999999 999999999999999999999985311 10 00000000 0000 0012478
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCE-EEcCCChhhHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI-VLTEPGLSVIISAV 637 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDi-vl~~~~~~~i~~~i 637 (847)
.|...++.++..+..+.|+|||.||.+|.+.|++|+..+.+.+.....++. ++ +++..+...+
T Consensus 132 ~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 195 (205)
T PRK13582 132 GKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAI 195 (205)
T ss_pred hHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHH
Confidence 899999999988899999999999999999999999887544444445665 44 5566665544
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.52 E-value=2.6e-07 Score=97.26 Aligned_cols=146 Identities=18% Similarity=0.201 Sum_probs=100.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC-CCCccc---------------------------
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSSLL--------------------------- 543 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~-~~~~~~--------------------------- 543 (847)
..+.+++.+++++++++|+++.+.||..+..+..+..++++..... ..+.+.
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 4567899999999999999999999999999999999999862110 000000
Q ss_pred ---------------Ccc---c-----------------------------cccCCcchHHHHH-------HhcCe----
Q 003103 544 ---------------GQD---K-----------------------------DASIAALPVDELI-------EKADG---- 565 (847)
Q Consensus 544 ---------------~~~---~-----------------------------~~~~~~~~~~~~~-------~~~~v---- 565 (847)
... . ....+.+.++++. .....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 000 0 0000111111111 11101
Q ss_pred ---EEEeCh--hhHHHHHHHHhhc----CCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHH
Q 003103 566 ---FAGVFP--EHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 636 (847)
Q Consensus 566 ---~ar~sP--~qK~~iV~~lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~ 636 (847)
+-.++| ..|..-++.+.+. ...+.++||+.||.+||+.|+.|+||+++++..++.||.+....+=.++.++
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~ 253 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAKA 253 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHHh
Confidence 223444 5788888877753 3568899999999999999999999999999999999999987665777665
Q ss_pred H
Q 003103 637 V 637 (847)
Q Consensus 637 i 637 (847)
|
T Consensus 254 i 254 (254)
T PF08282_consen 254 I 254 (254)
T ss_dssp H
T ss_pred C
Confidence 4
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=3.1e-07 Score=92.00 Aligned_cols=110 Identities=23% Similarity=0.300 Sum_probs=83.3
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHH
Q 003103 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 579 (847)
Q Consensus 500 ~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~ 579 (847)
.+|+.|++.|+++.++||.....+..+++++|+..- |. ..+.|...++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~------------------------------f~--g~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL------------------------------YQ--GQSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee------------------------------ec--CCCcHHHHHH
Confidence 689999999999999999999999999999998421 11 1234555444
Q ss_pred HH-hhcC---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCC----ChhhHHHHHHHHH
Q 003103 580 RL-QERK---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP----GLSVIISAVLTSR 641 (847)
Q Consensus 580 ~l-q~~g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~----~~~~i~~~i~~gR 641 (847)
.+ ++.| ..|+|+||+.||.+|++.|+++++++++.+..+..||+++..+ .+..+.+.+...|
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~ 172 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQ 172 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhc
Confidence 44 3333 4699999999999999999999999888888888999998533 2344455454333
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=7.7e-07 Score=95.27 Aligned_cols=66 Identities=24% Similarity=0.343 Sum_probs=54.3
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
.|..-++.+.++ | ..|+++||+.||.+|++.|++|++||++.+..++.||+|..+++-.++.++|+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 455555544332 3 35899999999999999999999999988889999999998888888888775
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.45 E-value=6.5e-07 Score=104.08 Aligned_cols=52 Identities=21% Similarity=0.372 Sum_probs=48.5
Q ss_pred EEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 587 ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 587 ~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
.|+++|||.||.+||+.|+.|||||+|.+.+|++||+|..+++-.++..+|+
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 4899999999999999999999999999999999999998888888888775
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.44 E-value=7.2e-07 Score=90.75 Aligned_cols=117 Identities=26% Similarity=0.376 Sum_probs=83.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
+++|++.+.++.|++.|+++.++|+-....+..+++.+|+... ........... .. .-..+-...|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~-~~~~~~~~~~g--~~----------~p~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV-YSNELVFDEKG--FI----------QPDGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE-EEEEEEEcCCC--eE----------ecceeeEEccc
Confidence 5799999999999999999999999999999999999997431 11000000000 00 00012234567
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccC
Q 003103 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD 622 (847)
Q Consensus 573 qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaD 622 (847)
.|...++.+.++ | ..+.|+||+.||.+|++.|+++++++.+....+.|+|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 788777776544 2 3589999999999999999999999755555666665
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.41 E-value=6.4e-05 Score=86.09 Aligned_cols=101 Identities=16% Similarity=0.215 Sum_probs=75.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
|++|++.+.++++++.|+++.++|+-+...+..+++++|+.+. +.+.+. ..+..|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~------Vigsd~------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG------VFASDG------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE------EEeCCC------------------ccccCCc
Confidence 5789999999999999999999999999999999999997321 111110 1135677
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHh
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 618 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~ 618 (847)
.|.+.++.....+ -+.++||..||.|+++.|+-.++++.+....+
T Consensus 128 ~K~~~l~~~l~~~-~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~~ 172 (479)
T PRK08238 128 AKAAALVEAFGER-GFDYAGNSAADLPVWAAARRAIVVGASPGVAR 172 (479)
T ss_pred hHHHHHHHHhCcc-CeeEecCCHHHHHHHHhCCCeEEECCCHHHHH
Confidence 7766554322222 25689999999999999999999985544433
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.6e-06 Score=91.98 Aligned_cols=64 Identities=25% Similarity=0.292 Sum_probs=53.8
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHH
Q 003103 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 636 (847)
Q Consensus 573 qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~ 636 (847)
.|..-++.+.+. | ..++++||+.||.+|++.|+.|+||+++++..++.||++..+++-.++..+
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhh
Confidence 477777777654 2 468999999999999999999999999999999999999987776666543
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.38 E-value=3.1e-06 Score=89.79 Aligned_cols=66 Identities=20% Similarity=0.207 Sum_probs=51.3
Q ss_pred hHHHHHHHHhhc------CCEEEEEcCCcCChhhhhhcCcceeccccc---HHHhhc--c-CEEEcCCChhhHHHHHH
Q 003103 573 HKYEIVKRLQER------KHICGMTGDGVNDAPALKKADIGIAVADAT---DAARSA--S-DIVLTEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV~~lq~~------g~~V~miGDG~ND~~aLk~AdVGIamg~g~---~~a~~a--a-Divl~~~~~~~i~~~i~ 638 (847)
.|..-++.+.+. ...|.++||+.||.+|++.|+.||||+++. +..|+. | ++|..+++-.++.++++
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 455555555433 346999999999999999999999999887 467876 4 58877888888887775
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.35 E-value=3e-06 Score=87.32 Aligned_cols=135 Identities=13% Similarity=0.058 Sum_probs=87.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccC-ccccccCCcchHHHHHHhcCeE--E-
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG-QDKDASIAALPVDELIEKADGF--A- 567 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~--a- 567 (847)
.+++|++.+.++.|++.|+++.++||.....+..+.+.++.......+....+ ......... -..+ .
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~---------~~~~~~~~ 139 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPH---------PCDGTCQN 139 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCC---------CCcccccc
Confidence 46899999999999999999999999999888888888754322211111111 100000000 0000 0
Q ss_pred EeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHh--hccCEEEcCCChhhHHHHHH
Q 003103 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR--SASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 568 r~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~--~aaDivl~~~~~~~i~~~i~ 638 (847)
++ ...|..+++.++.....+.|+|||.||..|++.||+.++-+.-.+-.+ ..+.+.. ++|..+...+.
T Consensus 140 ~c-g~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 140 QC-GCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred CC-CCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 11 347999999998888888999999999999999999877552111111 1222222 56777776664
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.2e-06 Score=84.19 Aligned_cols=102 Identities=23% Similarity=0.259 Sum_probs=76.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCc--------ccCccccccCCcchHHHHHHhcC
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSS--------LLGQDKDASIAALPVDELIEKAD 564 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 564 (847)
.+-|++++.++.|++.|.+|.++||--..-+..+|.++||+...+-... ..|.+...
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~--------------- 152 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNE--------------- 152 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCC---------------
Confidence 3468999999999999999999999999999999999999742111111 11111100
Q ss_pred eEEEeChhhHHHHHHHHhhc--CCEEEEEcCCcCChhhhhhcCcceecc
Q 003103 565 GFAGVFPEHKYEIVKRLQER--KHICGMTGDGVNDAPALKKADIGIAVA 611 (847)
Q Consensus 565 v~ar~sP~qK~~iV~~lq~~--g~~V~miGDG~ND~~aLk~AdVGIamg 611 (847)
.-+...-|.++++.+++. -..++|+|||.||.+|+..||-=|+.+
T Consensus 153 --ptsdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 153 --PTSDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred --ccccCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 011234799999999885 357899999999999999977776665
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.32 E-value=8.4e-07 Score=89.49 Aligned_cols=92 Identities=24% Similarity=0.292 Sum_probs=70.9
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh-h-
Q 003103 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE-H- 573 (847)
Q Consensus 496 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~-q- 573 (847)
+++.+.|+.++++|++++++||+....+..+++.+|++... +.+..... + .+....+|.+|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~-----v~~~~~~~----~------~~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN-----VIGNELFD----N------GGGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG-----EEEEEEEC----T------TCCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE-----EEEEeeee----c------ccceeeeeECCCCCC
Confidence 78889999999999999999999999999999999996421 11111000 0 012246777766 5
Q ss_pred -HHHHHHHH------hhcCCEEEEEcCCcCChhhhh
Q 003103 574 -KYEIVKRL------QERKHICGMTGDGVNDAPALK 602 (847)
Q Consensus 574 -K~~iV~~l------q~~g~~V~miGDG~ND~~aLk 602 (847)
|.+.++.+ +.....+.++|||.||.||||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 445789999999999999996
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.27 E-value=2.4e-06 Score=79.59 Aligned_cols=115 Identities=23% Similarity=0.383 Sum_probs=88.4
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHH
Q 003103 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 579 (847)
Q Consensus 500 ~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~ 579 (847)
-.|+.|.++||++.+|||.+...+..-|+++||..- |- =-++|....+
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~------------------------------~q--G~~dK~~a~~ 89 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHL------------------------------YQ--GISDKLAAFE 89 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCcee------------------------------ee--chHhHHHHHH
Confidence 368999999999999999999999999999999521 11 1256666665
Q ss_pred HHhhc----CCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCC----hhhHHHHHHHHHHHHHH
Q 003103 580 RLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAVLTSRAIFQR 646 (847)
Q Consensus 580 ~lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~----~~~i~~~i~~gR~~~~~ 646 (847)
.|.++ -.-|+++||..||.|+|++..+++|..++..-.++.||+|+.... +..+.+.|..++..++-
T Consensus 90 ~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~ 164 (170)
T COG1778 90 ELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDE 164 (170)
T ss_pred HHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHH
Confidence 55443 346899999999999999999999999999999999999987543 44445555555544443
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.24 E-value=8.2e-06 Score=87.31 Aligned_cols=66 Identities=21% Similarity=0.162 Sum_probs=49.3
Q ss_pred hHHHHHHHHhh-------cCCEEEEEcCCcCChhhhhhcCcceeccccc-HH-----HhhccCEEEcCCChhhHHHHHH
Q 003103 573 HKYEIVKRLQE-------RKHICGMTGDGVNDAPALKKADIGIAVADAT-DA-----ARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV~~lq~-------~g~~V~miGDG~ND~~aLk~AdVGIamg~g~-~~-----a~~aaDivl~~~~~~~i~~~i~ 638 (847)
.|..-++.+.+ ....|.++|||.||.+||+.|++|||||++. +. .+..+|++....+-.++.++++
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLD 265 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHH
Confidence 56555555543 2346899999999999999999999998544 21 3447889988877778887775
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.3e-05 Score=83.18 Aligned_cols=125 Identities=20% Similarity=0.274 Sum_probs=83.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC-CCCCCCcccCccccccCCcchHHHHHHhcCeEEE---
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--- 568 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar--- 568 (847)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+.. +..........+ ..+.+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~----------------g~~~g~~~~ 147 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDS----------------GEYAGFDEN 147 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCC----------------CcEECccCC
Confidence 368999999999999999999999999999999999999853 111100000000 000000
Q ss_pred ---eChhhHHHHHHHHhhc-C-CEEEEEcCCcCChhhhhh--cCcceecccc--cHHHhhccCEEEcCCChhhHHH
Q 003103 569 ---VFPEHKYEIVKRLQER-K-HICGMTGDGVNDAPALKK--ADIGIAVADA--TDAARSASDIVLTEPGLSVIIS 635 (847)
Q Consensus 569 ---~sP~qK~~iV~~lq~~-g-~~V~miGDG~ND~~aLk~--AdVGIamg~g--~~~a~~aaDivl~~~~~~~i~~ 635 (847)
..+..|.+.++.+.++ | ..+.|+||+.||..|.+. ++++++.+.. .+.....+|+++ +++..+.+
T Consensus 148 ~~~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~ 221 (224)
T PLN02954 148 EPTSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFV--TDFQDLIE 221 (224)
T ss_pred CcccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEE--CCHHHHHH
Confidence 1124477777777654 2 468899999999999777 5666666532 233445689988 45666654
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.16 E-value=1.8e-05 Score=84.83 Aligned_cols=66 Identities=26% Similarity=0.316 Sum_probs=51.2
Q ss_pred hHHHHHHHHhh----cC-CEEEEEcCCcCChhhhhhcCcceecccccHHHh----hcc-CEEE--cCCChhhHHHHHH
Q 003103 573 HKYEIVKRLQE----RK-HICGMTGDGVNDAPALKKADIGIAVADATDAAR----SAS-DIVL--TEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV~~lq~----~g-~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~----~aa-Divl--~~~~~~~i~~~i~ 638 (847)
.|..-++.+.+ .. ..|+++||+.||.+|++.|++|++|++|.+..| .+| +.+. ..++=..+.++++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 56665655543 24 789999999999999999999999999999988 666 6766 4455667766664
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.3e-05 Score=80.44 Aligned_cols=113 Identities=16% Similarity=0.088 Sum_probs=75.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchH-HHHHHhcCeEEE-e
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPV-DELIEKADGFAG-V 569 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~ar-~ 569 (847)
-++++++.+.++.|++.|+++.++|+.+......+.+..|+.... ..+.+.+... ++... .-...++.++.. .
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f---~~i~~~~~~~--~~~g~~~~~~~~~~~~~~~~ 145 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF---IEIYSNPASF--DNDGRHIVWPHHCHGCCSCP 145 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe---eEEeccCceE--CCCCcEEEecCCCCccCcCC
Confidence 478999999999999999999999999999999999998885321 0111111000 00000 000000111111 1
Q ss_pred ChhhHHHHHHHHhhc-CCEEEEEcCCcCChhhhhhcCccee
Q 003103 570 FPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIA 609 (847)
Q Consensus 570 sP~qK~~iV~~lq~~-g~~V~miGDG~ND~~aLk~AdVGIa 609 (847)
....|.++++.++++ ...+.|+|||.||..|.++||+-.|
T Consensus 146 ~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 123599999999887 8889999999999999999987554
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.03 E-value=9.4e-06 Score=80.71 Aligned_cols=100 Identities=23% Similarity=0.266 Sum_probs=69.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhh
Q 003103 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (847)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~q 573 (847)
++|++.+.++.+++.|+++.++||.....+..+++.+|+... .... +... .+..+... ...-....+..
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~-~~~~-~~~~-~~g~~~g~--------~~~~~~~~~~~ 142 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDV-FANR-LEFD-DNGLLTGP--------IEGQVNPEGEC 142 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchh-eeee-EEEC-CCCEEeCc--------cCCcccCCcch
Confidence 589999999999999999999999999999999999998531 1100 0000 00000000 00001245688
Q ss_pred HHHHHHHHhhc----CCEEEEEcCCcCChhhhhhc
Q 003103 574 KYEIVKRLQER----KHICGMTGDGVNDAPALKKA 604 (847)
Q Consensus 574 K~~iV~~lq~~----g~~V~miGDG~ND~~aLk~A 604 (847)
|...++.++++ ...+.++|||.||.+|++.|
T Consensus 143 K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 143 KGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 99999887654 34689999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.00 E-value=2.9e-05 Score=80.32 Aligned_cols=135 Identities=11% Similarity=0.046 Sum_probs=84.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC-CCC-cccCccccccCCcchHHHHHHhcCeE-EEe
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSS-SLLGQDKDASIAALPVDELIEKADGF-AGV 569 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~-ar~ 569 (847)
+++|++.+.++.|++.|+++.++||-....+..+.++. +..... ... .+.+.............+ + .++
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~-------~~~~~ 145 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEH-------CQNHC 145 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCcccc-------ccccC
Confidence 67999999999999999999999999998899888887 643111 000 011100000000000000 0 000
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHh--hccCEEEcCCChhhHHHHHH
Q 003103 570 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR--SASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 570 sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~--~aaDivl~~~~~~~i~~~i~ 638 (847)
...|..+++.++.....+.|+|||.||.+|.++||+.++-+.-.+.++ ..+.+.+ ++|..+...++
T Consensus 146 -~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l~ 213 (219)
T PRK09552 146 -GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTELK 213 (219)
T ss_pred -CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHHH
Confidence 124888899888777789999999999999999999777432112222 2243433 56777766653
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=3e-05 Score=80.38 Aligned_cols=125 Identities=17% Similarity=0.181 Sum_probs=87.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
.++.|++.+.++.|++.|+++.++||........+.++.|+.... . .+.+.+ -+.+..|
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-~--~~~~~~------------------~~~~~kp 150 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF-S--VVIGGD------------------SLPNKKP 150 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc-c--EEEcCC------------------CCCCCCc
Confidence 457899999999999999999999999999999999999985321 1 111100 0111222
Q ss_pred --hhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCc-ceeccc----ccHHHhhccCEEEcCCChhhHHHHHHH
Q 003103 572 --EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAVLT 639 (847)
Q Consensus 572 --~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIamg~----g~~~a~~aaDivl~~~~~~~i~~~i~~ 639 (847)
+--..+.+.++.....+.|+||+.||+.|.+.|++ +|.+.. ..+.....+|+++ +++..+...+.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 151 DPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred ChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 22234444554445678999999999999999998 555532 2344455788888 778888887754
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.93 E-value=2.9e-05 Score=79.14 Aligned_cols=108 Identities=16% Similarity=0.096 Sum_probs=76.6
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeE-EEe
Q 003103 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGF-AGV 569 (847)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-ar~ 569 (847)
..++++++.+.++.+++.|++++++||.....+..+++.+|+..-. ........+ ...+++ +. -.+
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~-~~~l~~~~~--g~~~g~----------~~~~~~ 151 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAI-GTRLEESED--GIYTGN----------IDGNNC 151 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceE-ecceEEcCC--CEEeCC----------ccCCCC
Confidence 3568999999999999999999999999999999999999985311 110000000 000000 00 123
Q ss_pred ChhhHHHHHHHHhh-cCC---EEEEEcCCcCChhhhhhcCcceecc
Q 003103 570 FPEHKYEIVKRLQE-RKH---ICGMTGDGVNDAPALKKADIGIAVA 611 (847)
Q Consensus 570 sP~qK~~iV~~lq~-~g~---~V~miGDG~ND~~aLk~AdVGIamg 611 (847)
.++.|...++.+.+ .+. .+.++||+.||.|+++.|+.++++.
T Consensus 152 ~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 152 KGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred CChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 46788887776654 342 5889999999999999999999886
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.86 E-value=4.2e-05 Score=79.08 Aligned_cols=127 Identities=18% Similarity=0.194 Sum_probs=92.7
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeC
Q 003103 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (847)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~s 570 (847)
...+-|+++++++.|+++|++..++|++....+..+.+..|+..... .+.+.+.. -..+-.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~---~i~g~~~~----------------~~~KP~ 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFD---VIVGGDDV----------------PPPKPD 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccc---eEEcCCCC----------------CCCCcC
Confidence 45678999999999999999999999999999999999999864221 11110000 011224
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcC---cceeccc--ccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKAD---IGIAVAD--ATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 571 P~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~Ad---VGIamg~--g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
|+......+.+.-..+.+.||||..+|..|=|+|+ ||+..|. +.......+|+++ +++..+...+.
T Consensus 148 P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l~ 218 (220)
T COG0546 148 PEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALLA 218 (220)
T ss_pred HHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHHh
Confidence 55555666666555447999999999999999998 6666763 4566777799999 66777766553
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.75 E-value=6e-05 Score=70.67 Aligned_cols=118 Identities=15% Similarity=0.070 Sum_probs=76.1
Q ss_pred cccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE
Q 003103 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (847)
Q Consensus 489 ~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 568 (847)
.-..++++++.+.+++|++.|++++++||.....+....++.|+.... ...+......... .............+.+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~ 96 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYF--DPVITSNGAAIYY-PKEGLFLGGGPFDIGK 96 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhh--hheeccchhhhhc-ccccccccccccccCC
Confidence 345688999999999999999999999999999999999999873210 0011000000000 0000000011112345
Q ss_pred eChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhh-cCccee
Q 003103 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKK-ADIGIA 609 (847)
Q Consensus 569 ~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~-AdVGIa 609 (847)
-.|+.+..+.+.+......+.++||+.||..|.+. ..-+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 97 PNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 56666777777776666789999999999999998 444443
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0001 Score=75.21 Aligned_cols=124 Identities=18% Similarity=0.180 Sum_probs=82.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+++++|++.|+++.++||.+...+...-+..|+.... + ..+ +.+. . ...+-.|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f-~-~i~-~~~~---------------~-~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF-D-HVI-GSDE---------------V-PRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe-e-eEE-ecCc---------------C-CCCCCChH
Confidence 67899999999999999999999999988888888888884311 0 000 0000 0 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCccee-c--c--cccHHHhhccCEEEcCCChhhHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-V--A--DATDAARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIa-m--g--~g~~~a~~aaDivl~~~~~~~i~~~i 637 (847)
-=..+.+.++-....+.|+||+.+|..|-++|++... + | +..+..++.+|+++ +++..+...+
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 2233334444334669999999999999999998543 2 3 23344567899988 6666665544
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00028 Score=73.09 Aligned_cols=43 Identities=14% Similarity=0.153 Sum_probs=38.6
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003103 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (847)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~ 533 (847)
.+..-+++.++|++|++.|++++++||..+..+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4555668999999999999999999999999999999999984
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00031 Score=74.18 Aligned_cols=148 Identities=16% Similarity=0.144 Sum_probs=93.9
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC--CC-CCCc-c-cCc--------------------
Q 003103 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTN--MY-PSSS-L-LGQ-------------------- 545 (847)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~--~~-~~~~-~-~~~-------------------- 545 (847)
..+..|+..++++++++.|+.++..||......+.+.+++++..+ .+ .++. + ...
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 345678899999999999999999999999999999998887542 00 0100 0 000
Q ss_pred --------------c-ccc-------cCCcch----H---HHHHHhc--Ce---EE-----EeCh--hhHHHHHHHHhhc
Q 003103 546 --------------D-KDA-------SIAALP----V---DELIEKA--DG---FA-----GVFP--EHKYEIVKRLQER 584 (847)
Q Consensus 546 --------------~-~~~-------~~~~~~----~---~~~~~~~--~v---~a-----r~sP--~qK~~iV~~lq~~ 584 (847)
. ... ....+. + .+.+... .+ ++ .+.| ..|..-++.+.++
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 0 000 000001 1 1111111 11 11 3344 4788888887664
Q ss_pred ----CCEEEEEcCCcCChhhhhh-cCcceecccccHHHhhccC-------EEEcCCChhhHHHHHH
Q 003103 585 ----KHICGMTGDGVNDAPALKK-ADIGIAVADATDAARSASD-------IVLTEPGLSVIISAVL 638 (847)
Q Consensus 585 ----g~~V~miGDG~ND~~aLk~-AdVGIamg~g~~~a~~aaD-------ivl~~~~~~~i~~~i~ 638 (847)
...|.++||+.||.+|++. ++.|++|+++.+..++.++ ++.....-+.+.++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3568999999999999998 6799999998888776443 4443444556666554
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00059 Score=72.93 Aligned_cols=123 Identities=16% Similarity=0.210 Sum_probs=79.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
.++.|++.++++.|++.|+++.++||.....+..+.++.|+.... + .+.+.+. ..+-.|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f-~--~i~~~d~------------------~~~~Kp 158 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF-R--WIIGGDT------------------LPQKKP 158 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC-e--EEEecCC------------------CCCCCC
Confidence 467899999999999999999999999988888888888874311 0 0100000 000112
Q ss_pred h--hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCc-ceec--c--cccHHHhhccCEEEcCCChhhHHHHH
Q 003103 572 E--HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAV--A--DATDAARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 572 ~--qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIam--g--~g~~~a~~aaDivl~~~~~~~i~~~i 637 (847)
+ -=..+.+.+.-....+.|+||+.||..|.++|++ .+++ | ...+.....+|.++ +++..+..++
T Consensus 159 ~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~ 229 (272)
T PRK13223 159 DPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGC 229 (272)
T ss_pred CcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHH
Confidence 1 1122223332234568899999999999999997 3444 3 22333455789988 5677766543
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00077 Score=69.33 Aligned_cols=124 Identities=18% Similarity=0.141 Sum_probs=81.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|++.|+++.++||.....+..+-+..|+.... ..+.+.+.. -..+-.|+
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f---~~i~~~~~~----------------~~~Kp~p~ 142 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF---DVVITLDDV----------------EHAKPDPE 142 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce---eEEEecCcC----------------CCCCCCcH
Confidence 36799999999999999999999999999998888999985311 001110000 00111233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc---eecccc--cHHHhhccCEEEcCCChhhHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG---IAVADA--TDAARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG---Iamg~g--~~~a~~aaDivl~~~~~~~i~~~i 637 (847)
-=.++.+.+.-....+.|+||..+|..|-++|++- +.-|.+ .+.....+|+++ +++..+.+.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 143 PVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 22334444433345688999999999999999984 333422 223445688887 6677776654
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0018 Score=68.96 Aligned_cols=139 Identities=12% Similarity=0.120 Sum_probs=84.5
Q ss_pred CCCcchHHHHHHHHh-CCCeEEEEcCCCHHHHHHHHHHcCCC--C-CC---C--CCC----ccc----------------
Q 003103 493 PPRHDSAETIRRALN-LGVNVKMITGDQLAIGKETGRRLGMG--T-NM---Y--PSS----SLL---------------- 543 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~-aGI~v~miTGD~~~tA~~iA~~~Gi~--~-~~---~--~~~----~~~---------------- 543 (847)
.+-+++.++|++|++ .|++++++||..........+.+++. . +. . ... .+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 445789999999998 79999999999999988888776642 0 00 0 000 000
Q ss_pred ---Ccccc----------ccCC--cchHHHHH----HhcC--------eEEEeCh--hhHHHHHHHHhhc----CCEEEE
Q 003103 544 ---GQDKD----------ASIA--ALPVDELI----EKAD--------GFAGVFP--EHKYEIVKRLQER----KHICGM 590 (847)
Q Consensus 544 ---~~~~~----------~~~~--~~~~~~~~----~~~~--------v~ar~sP--~qK~~iV~~lq~~----g~~V~m 590 (847)
|...+ ...+ .+.+.++. +... -+-.+.| .+|..-++.+.+. ...|.+
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 00000 0001 11111111 1111 1223344 3788777766544 356889
Q ss_pred EcCCcCChhhhhhc----CcceecccccHHHhhccCEEEcCCChhhHHHHH
Q 003103 591 TGDGVNDAPALKKA----DIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 591 iGDG~ND~~aLk~A----dVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i 637 (847)
+||+.||.+|++.+ +.||+||++. ..|++.|. +-..+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~--~~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLA--GVPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCC--CHHHHHHHH
Confidence 99999999999999 9999999764 35778774 444554444
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0018 Score=66.88 Aligned_cols=39 Identities=21% Similarity=0.204 Sum_probs=35.9
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003103 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (847)
Q Consensus 495 r~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~ 533 (847)
-+.+.++|+.|++.|++++++||.....+..+.+++|+.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 344899999999999999999999999999999999985
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.00034 Score=73.16 Aligned_cols=67 Identities=18% Similarity=0.203 Sum_probs=55.2
Q ss_pred hhHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccC----EEEcCCChhhHHHHHH
Q 003103 572 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD----IVLTEPGLSVIISAVL 638 (847)
Q Consensus 572 ~qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaD----ivl~~~~~~~i~~~i~ 638 (847)
..|..-++.+.++ | ..|+++||+.||.+|++.|+.||+|+++.+..|+.|| +|...++=.++.++|.
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 3678878877654 3 2478999999999999999999999999999999999 7766666667777775
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.00097 Score=68.39 Aligned_cols=120 Identities=16% Similarity=0.161 Sum_probs=77.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.++++.|++.|+++.++|+-....+..+.++.|+.... + .+.+.+. ..+..|+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-~--~~~~~~~------------------~~~~Kp~ 143 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF-S--VLIGGDS------------------LAQRKPH 143 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC-c--EEEecCC------------------CCCCCCC
Confidence 57899999999999999999999999998999999999985321 1 1111100 0111222
Q ss_pred --hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCccee-c--ccc--cHHHhhccCEEEcCCChhhHHH
Q 003103 573 --HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-V--ADA--TDAARSASDIVLTEPGLSVIIS 635 (847)
Q Consensus 573 --qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIa-m--g~g--~~~a~~aaDivl~~~~~~~i~~ 635 (847)
-=....+.+.-....+.|+||..||..|.++|++-.. + |.+ .+.....+|.++ +++..+..
T Consensus 144 p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~~ 211 (213)
T TIGR01449 144 PDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELPP 211 (213)
T ss_pred hHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHHh
Confidence 1122223332233568899999999999999998654 3 322 123334688887 55666543
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0019 Score=66.79 Aligned_cols=119 Identities=14% Similarity=0.142 Sum_probs=77.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
-++.|++.++++.|++.|+++.++|+........+.++.|+..... ..+.+ +. .....|
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~--~~~~~-~~------------------~~~~Kp 149 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFD--ALASA-EK------------------LPYSKP 149 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhccc--EEEEc-cc------------------CCCCCC
Confidence 4678999999999999999999999999998999999999854211 01100 00 001112
Q ss_pred hhHHHHHHHHhhcC---CEEEEEcCCcCChhhhhhcCcceec-ccc---cHHHhhccCEEEcCCChhhHH
Q 003103 572 EHKYEIVKRLQERK---HICGMTGDGVNDAPALKKADIGIAV-ADA---TDAARSASDIVLTEPGLSVII 634 (847)
Q Consensus 572 ~qK~~iV~~lq~~g---~~V~miGDG~ND~~aLk~AdVGIam-g~g---~~~a~~aaDivl~~~~~~~i~ 634 (847)
+-. -+-+.+++.| ..+.|+||..||+.|-++|++.... ..+ .+.-...+|.++ .++..+.
T Consensus 150 ~~~-~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 150 HPE-VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred CHH-HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHHh
Confidence 221 2334444443 4588999999999999999986544 222 222223577777 5566554
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0045 Score=66.08 Aligned_cols=118 Identities=11% Similarity=0.078 Sum_probs=79.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.++++.|++.|+++.++|+.+...+..+-+..|+..... ..+. +...+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~--~vi~-----------------------~~~~~~ 196 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFS--VVQA-----------------------GTPILS 196 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheE--EEEe-----------------------cCCCCC
Confidence 567999999999999999999999999999999999999853210 0000 000011
Q ss_pred hHHHHHHHHhhc---CCEEEEEcCCcCChhhhhhcCccee-cccc--c--HHHhhccCEEEcCCChhhHHHHH
Q 003103 573 HKYEIVKRLQER---KHICGMTGDGVNDAPALKKADIGIA-VADA--T--DAARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 573 qK~~iV~~lq~~---g~~V~miGDG~ND~~aLk~AdVGIa-mg~g--~--~~a~~aaDivl~~~~~~~i~~~i 637 (847)
.+.-+.+.+++. ...++|+||+.+|..|-++|++-.. +..| + +.....+|+++ +++..+.+.+
T Consensus 197 k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 197 KRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred CHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 122222333332 3468999999999999999988533 2222 2 23344689988 6787777655
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0086 Score=63.26 Aligned_cols=133 Identities=12% Similarity=0.086 Sum_probs=82.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE---
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--- 568 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar--- 568 (847)
-++|||+.+.++.|++.|+++.++||-....+..+.++.|+..... .+..+.... +++ .+...
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~---~IvSN~L~f--~~d---------GvltG~~~ 185 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNV---KVVSNFMDF--DED---------GVLKGFKG 185 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCc---eEEeeeEEE--CCC---------CeEeCCCC
Confidence 4679999999999999999999999999999999999999853210 110000000 000 00111
Q ss_pred --eChhhHHHHHHH-----Hh--hcCCEEEEEcCCcCChhhhhhc---Ccceecc--cc-c----HHHhhccCEEEcCCC
Q 003103 569 --VFPEHKYEIVKR-----LQ--ERKHICGMTGDGVNDAPALKKA---DIGIAVA--DA-T----DAARSASDIVLTEPG 629 (847)
Q Consensus 569 --~sP~qK~~iV~~-----lq--~~g~~V~miGDG~ND~~aLk~A---dVGIamg--~g-~----~~a~~aaDivl~~~~ 629 (847)
+....|.+.+.. ++ .....|.++|||.||++|..-. +--+.+| +. . +.=+++=|+||.+|.
T Consensus 186 P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~ 265 (277)
T TIGR01544 186 PLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDE 265 (277)
T ss_pred CcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCC
Confidence 011345554432 22 1235688999999999996543 2233444 22 1 234568899999887
Q ss_pred hhhHHHHHH
Q 003103 630 LSVIISAVL 638 (847)
Q Consensus 630 ~~~i~~~i~ 638 (847)
=-.++.+|.
T Consensus 266 t~~v~~~il 274 (277)
T TIGR01544 266 TLEVANSIL 274 (277)
T ss_pred CchHHHHHH
Confidence 656665553
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.002 Score=67.04 Aligned_cols=124 Identities=15% Similarity=0.126 Sum_probs=80.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|++.|+++.++|+.+...+..+-++.|+.... ..+.+.+.. -..+-.|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f---~~i~~~~~~----------------~~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC---AVLIGGDTL----------------AERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc---cEEEecCcC----------------CCCCCCHH
Confidence 56899999999999999999999999988888887888874321 011110000 01112232
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCccee-c--ccc--c-HHHhhccCEEEcCCChhhHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-V--ADA--T-DAARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIa-m--g~g--~-~~a~~aaDivl~~~~~~~i~~~i 637 (847)
-=..+.+.+.-....+.|+||+.||..|-++|++... + |.. . ......+|+++ +++..+.+.+
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~~ 224 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNPA 224 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHHh
Confidence 2234444454445669999999999999999998643 3 321 1 12234689988 6676665544
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0041 Score=64.19 Aligned_cols=122 Identities=19% Similarity=0.204 Sum_probs=79.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC-CCCCCCcccCccccccCCcchHHHHHHhcCeEEEeC
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~s 570 (847)
.++.||+.+.++.|++.|+++.++||-....+..+.+..|+.. +..+ ..+...+ ..+-.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~-~i~~~~~-------------------~~~~K 145 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVD-AVVCPSD-------------------VAAGR 145 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCC-EEEcCCc-------------------CCCCC
Confidence 4789999999999999999999999999999999989898851 1111 1111100 00112
Q ss_pred hhhHHHHHHHHhhcC----CEEEEEcCCcCChhhhhhcCccee--ccccc----HHHhhccCEEEcCCChhhHHHH
Q 003103 571 PEHKYEIVKRLQERK----HICGMTGDGVNDAPALKKADIGIA--VADAT----DAARSASDIVLTEPGLSVIISA 636 (847)
Q Consensus 571 P~qK~~iV~~lq~~g----~~V~miGDG~ND~~aLk~AdVGIa--mg~g~----~~a~~aaDivl~~~~~~~i~~~ 636 (847)
|+.. .+-+.+++.| ..+.|+||+.+|..|-++|++..+ +..|. ......+|.++ ++++.+...
T Consensus 146 P~p~-~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~~ 218 (220)
T TIGR03351 146 PAPD-LILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPAL 218 (220)
T ss_pred CCHH-HHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHHh
Confidence 3221 2223333332 468999999999999999999863 32322 12234578777 556665543
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0049 Score=65.19 Aligned_cols=94 Identities=17% Similarity=0.130 Sum_probs=64.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.||+.+.++.|++.|+++.++||.....+..+-++.|+..... ..+.+.+. ..+-.|+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~--d~ii~~~~------------------~~~~KP~ 158 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP--DYNVTTDD------------------VPAGRPA 158 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC--ceEEcccc------------------CCCCCCC
Confidence 457899999999999999999999999999888888888754211 11111110 0011232
Q ss_pred hHHHHHHHHhhcC----CEEEEEcCCcCChhhhhhcCcc
Q 003103 573 HKYEIVKRLQERK----HICGMTGDGVNDAPALKKADIG 607 (847)
Q Consensus 573 qK~~iV~~lq~~g----~~V~miGDG~ND~~aLk~AdVG 607 (847)
...+.+.+++.| ..+.|+||..+|..|-+.|++-
T Consensus 159 -p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 159 -PWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred -HHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 223344444443 3489999999999999999974
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0066 Score=71.11 Aligned_cols=48 Identities=10% Similarity=0.074 Sum_probs=40.0
Q ss_pred EEecccCC-CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003103 486 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (847)
Q Consensus 486 G~i~~~D~-lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~ 533 (847)
|.+.-.|. .-+.+.++|+.|+++|+.+++.||.....+..+++++|+.
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 55554443 4457899999999999999999999999999999999974
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.008 Score=64.12 Aligned_cols=122 Identities=13% Similarity=0.113 Sum_probs=78.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++-|++.++++.|++.|+++.++||.....+..+-+..|+..... ..+.+.+. ..+..|+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~--d~i~~~~~------------------~~~~KP~ 160 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP--DHVVTTDD------------------VPAGRPY 160 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc--eEEEcCCc------------------CCCCCCC
Confidence 567899999999999999999999999888777777776642110 11111100 0111232
Q ss_pred hHHHHHHHHhhcC----CEEEEEcCCcCChhhhhhcCc---ceecccc-------------------------cHHHhhc
Q 003103 573 HKYEIVKRLQERK----HICGMTGDGVNDAPALKKADI---GIAVADA-------------------------TDAARSA 620 (847)
Q Consensus 573 qK~~iV~~lq~~g----~~V~miGDG~ND~~aLk~AdV---GIamg~g-------------------------~~~a~~a 620 (847)
..-+.+.+++.| ..+.||||..+|..|-+.|++ |+.-|.+ .+....-
T Consensus 161 -p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 239 (267)
T PRK13478 161 -PWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAG 239 (267)
T ss_pred -hHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcC
Confidence 122344444443 458999999999999999997 3333422 1223445
Q ss_pred cCEEEcCCChhhHHHHH
Q 003103 621 SDIVLTEPGLSVIISAV 637 (847)
Q Consensus 621 aDivl~~~~~~~i~~~i 637 (847)
+|+++ +++..+...+
T Consensus 240 a~~vi--~~~~~l~~~l 254 (267)
T PRK13478 240 AHYVI--DTIADLPAVI 254 (267)
T ss_pred CCeeh--hhHHHHHHHH
Confidence 88888 6677776655
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0019 Score=65.52 Aligned_cols=94 Identities=19% Similarity=0.115 Sum_probs=65.7
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeC
Q 003103 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (847)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~s 570 (847)
.+++.+++.++++.|++.|+++.++||-....+..+-+..|+..-. + .+.+.+ .+..+-.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f-~--~~~~~~-----------------~~~~KP~ 163 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF-P--VQIWME-----------------DCPPKPN 163 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC-C--EEEeec-----------------CCCCCcC
Confidence 4556778899999999999999999999999999999999985321 0 110000 0111334
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhc
Q 003103 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKA 604 (847)
Q Consensus 571 P~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~A 604 (847)
|+--....+.+.-....+.|+||+.+|+.|-++|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 4444445555554556789999999999887764
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.013 Score=58.17 Aligned_cols=144 Identities=17% Similarity=0.187 Sum_probs=95.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCc----------------cccccCCcchH
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQ----------------DKDASIAALPV 556 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~----------------~~~~~~~~~~~ 556 (847)
++-|++.++++.|++. ...+++|---.+-++++|..+|++........+.-. ...+.++++++
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 4568999999998875 566777777778899999999995321111111000 00111222222
Q ss_pred HHHHHhcCeEEEeChhhHHHHHHHHhhc------------------CCEEEEEcCCcCChhhhhhcCc--ceecc-cccH
Q 003103 557 DELIEKADGFAGVFPEHKYEIVKRLQER------------------KHICGMTGDGVNDAPALKKADI--GIAVA-DATD 615 (847)
Q Consensus 557 ~~~~~~~~v~ar~sP~qK~~iV~~lq~~------------------g~~V~miGDG~ND~~aLk~AdV--GIamg-~g~~ 615 (847)
-+-++ .+|.|..|.+-.+|++..+.- ....+++||.+.|+.||+.+.= |+|+. +|.+
T Consensus 162 fe~lD--e~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNe 239 (315)
T COG4030 162 FEKLD--ELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNE 239 (315)
T ss_pred HHHHH--HHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCc
Confidence 22111 258888887665665555532 2346889999999999998853 47777 7888
Q ss_pred HHhhccCEEEcCCChhhHHHHHHH
Q 003103 616 AARSASDIVLTEPGLSVIISAVLT 639 (847)
Q Consensus 616 ~a~~aaDivl~~~~~~~i~~~i~~ 639 (847)
=|..-||+.+..++..+....|+.
T Consensus 240 Yal~eAdVAvisp~~~a~~pviel 263 (315)
T COG4030 240 YALKEADVAVISPTAMAEAPVIEL 263 (315)
T ss_pred ccccccceEEeccchhhhhHHHHH
Confidence 888899999998888888777753
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.011 Score=62.30 Aligned_cols=43 Identities=7% Similarity=-0.038 Sum_probs=38.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~ 534 (847)
+..-+.+.++|++|++.||.+++.||-.......+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3456779999999999999999999999999999999999853
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0081 Score=61.62 Aligned_cols=107 Identities=13% Similarity=0.044 Sum_probs=73.7
Q ss_pred CCCcchHHHH-HHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 493 PPRHDSAETI-RRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 493 ~lr~~~~~~I-~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
.++|++.+.| +.+++.|+++.++|+-....+..+++.+|+.. ...+.+-..+...++. . .=..+.-
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~----~~~~i~t~l~~~~tg~--------~-~g~~c~g 161 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP----RVNLIASQMQRRYGGW--------V-LTLRCLG 161 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc----cCceEEEEEEEEEccE--------E-CCccCCC
Confidence 4589999999 57888999999999999999999999999621 0011111111000000 0 0123567
Q ss_pred hhHHHHHHHH-hhcCCEEEEEcCCcCChhhhhhcCcceeccc
Q 003103 572 EHKYEIVKRL-QERKHICGMTGDGVNDAPALKKADIGIAVAD 612 (847)
Q Consensus 572 ~qK~~iV~~l-q~~g~~V~miGDG~ND~~aLk~AdVGIamg~ 612 (847)
++|.+-++.. .......-+-||..||.|+|+.|+-+++++.
T Consensus 162 ~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 162 HEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred hHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 8898877654 3333445688999999999999999999974
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0091 Score=63.28 Aligned_cols=121 Identities=18% Similarity=0.103 Sum_probs=76.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|++.|+++.++|+.....+..+-+..|+.... ...+.+.+.. ..+-.|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~ii~~~d~~-----------------~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFF--SVVLAAEDVY-----------------RGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhC--cEEEecccCC-----------------CCCCCHH
Confidence 46899999999999999999999999999999888889885311 0111111000 0111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcce-ec-ccccHHHhhccCEEEcCCChhhHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AV-ADATDAARSASDIVLTEPGLSVII 634 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGI-am-g~g~~~a~~aaDivl~~~~~~~i~ 634 (847)
-=....+.+.-....+.|+||..+|+.|-++|++-. ++ |.........+|.++ ++++.+.
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el~ 231 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDLS 231 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHHH
Confidence 112223333333456899999999999999999843 33 322222333578877 5565543
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.007 Score=61.99 Aligned_cols=107 Identities=12% Similarity=0.031 Sum_probs=73.3
Q ss_pred CCCcchHHHHH-HHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 493 PPRHDSAETIR-RALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 493 ~lr~~~~~~I~-~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
.++|++.+.|+ .+++.|++++++|+=....+..+|+..|+... ..+.+-+.+.. ++ .. ..=..+.-
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~----~~~i~t~le~~-~g---g~-----~~g~~c~g 160 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR----LNLIASQIERG-NG---GW-----VLPLRCLG 160 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc----CcEEEEEeEEe-CC---ce-----EcCccCCC
Confidence 46899999996 78989999999999999999999998665221 01111111100 00 00 01123567
Q ss_pred hhHHHHHHHH-hhcCCEEEEEcCCcCChhhhhhcCcceeccc
Q 003103 572 EHKYEIVKRL-QERKHICGMTGDGVNDAPALKKADIGIAVAD 612 (847)
Q Consensus 572 ~qK~~iV~~l-q~~g~~V~miGDG~ND~~aLk~AdVGIamg~ 612 (847)
++|.+-++.. .......-+-||..||.|||+.||-.++++.
T Consensus 161 ~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 161 HEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred hHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 8898877644 3223345688999999999999999999973
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.0074 Score=69.70 Aligned_cols=123 Identities=11% Similarity=0.060 Sum_probs=80.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.||+.+.++.|++.|+++.++|+-....+..+-+.+|+..... ..+.+.+ +-.+-.|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~--~i~~~d~------------------v~~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVT--ETFSIEQ------------------INSLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcc--eeEecCC------------------CCCCCCcH
Confidence 678999999999999999999999999999999999999853210 0111100 00011232
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCc-ceecc--cccHHHhhccCEEEcCCChhhHHHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVA--DATDAARSASDIVLTEPGLSVIISAVLT 639 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIamg--~g~~~a~~aaDivl~~~~~~~i~~~i~~ 639 (847)
-=....+.++ ...+.|+||..+|+.|-+.|++ .|++. .+.+.....+|+++ ++++.+.+.+..
T Consensus 390 ~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 455 (459)
T PRK06698 390 LVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILST 455 (459)
T ss_pred HHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHH
Confidence 1111222221 3468999999999999999998 34443 22222234588888 667777776643
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.012 Score=59.81 Aligned_cols=39 Identities=31% Similarity=0.360 Sum_probs=35.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 531 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~G 531 (847)
++.+++.+++++|++.|+++.++||.....+....++++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 467899999999999999999999999999998888754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.004 Score=70.41 Aligned_cols=71 Identities=25% Similarity=0.269 Sum_probs=51.0
Q ss_pred EeChh--hHHHHHHHHhhc----C---CEEEEEcCCcCChhhhhhcC-cceecccccHHHhhcc--------CEEEc-CC
Q 003103 568 GVFPE--HKYEIVKRLQER----K---HICGMTGDGVNDAPALKKAD-IGIAVADATDAARSAS--------DIVLT-EP 628 (847)
Q Consensus 568 r~sP~--qK~~iV~~lq~~----g---~~V~miGDG~ND~~aLk~Ad-VGIamg~g~~~a~~aa--------Divl~-~~ 628 (847)
.+.|. .|..-++.|.++ | ..|.++||+.||.+||+.|+ .||+|+++.+..++.+ +++.. +.
T Consensus 168 dI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~ 247 (413)
T PLN02382 168 DVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATER 247 (413)
T ss_pred EEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCC
Confidence 34443 488777777654 3 37899999999999999999 6999999998888643 55543 33
Q ss_pred ChhhHHHHHH
Q 003103 629 GLSVIISAVL 638 (847)
Q Consensus 629 ~~~~i~~~i~ 638 (847)
+-.+|.+++.
T Consensus 248 ~~~GI~~al~ 257 (413)
T PLN02382 248 CAAGIIQAIG 257 (413)
T ss_pred CccHHHHHHH
Confidence 4455555554
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0059 Score=63.39 Aligned_cols=89 Identities=20% Similarity=0.215 Sum_probs=61.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGD----QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD----~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 568 (847)
.+.+++.+.++.+++.|+++.++|+- ...++..+.+.+|+.... ..+.+.+.. ..
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f---~~i~~~d~~------------------~~ 172 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN---PVIFAGDKP------------------GQ 172 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe---eEEECCCCC------------------CC
Confidence 34555999999999999999999997 667899999999995311 111111110 00
Q ss_pred eChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc
Q 003103 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (847)
Q Consensus 569 ~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG 607 (847)
-.| +|. ..+++.| .+.|+||..||..|-++|++-
T Consensus 173 ~Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 173 YQY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CCC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 112 232 3445555 478999999999999999873
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.018 Score=60.73 Aligned_cols=115 Identities=12% Similarity=0.127 Sum_probs=74.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.++++.|++.|+++.++|+-....+...-+..|+.... + ..+.+.+.. ..+-.|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F-d-~iv~~~~~~-----------------~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF-Q-AVIIGSECE-----------------HAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC-c-EEEecCcCC-----------------CCCCChH
Confidence 46789999999999999999999999999999988999985321 0 111111000 1112232
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCccee-cccc---cHHHhhccCEEEc
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-VADA---TDAARSASDIVLT 626 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIa-mg~g---~~~a~~aaDivl~ 626 (847)
-=....+.+.-....+.|+||..+|..|-++|++-.. +..| .+.....+|.++.
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~ 226 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIK 226 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEec
Confidence 2233334444344568999999999999999988432 2222 1222346888883
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.014 Score=57.83 Aligned_cols=98 Identities=9% Similarity=-0.038 Sum_probs=56.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHH--------HHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCe
Q 003103 494 PRHDSAETIRRALNLGVNVKMITGDQLA--------IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADG 565 (847)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~~--------tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 565 (847)
+.||+++++++|++.|+++.++|+.... .....-+..|+..-... .....+.. -
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~~~~~~~~----------------~ 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLC--PHKHGDGC----------------E 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEEC--cCCCCCCC----------------C
Confidence 6799999999999999999999987631 12222334555321000 00000000 0
Q ss_pred EEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCccee
Q 003103 566 FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609 (847)
Q Consensus 566 ~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIa 609 (847)
..+-.|+-=....+.+.-.-+.+.|+||..+|..|-++|++-..
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 01112222233334443333568999999999999999998544
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.051 Score=66.54 Aligned_cols=170 Identities=19% Similarity=0.186 Sum_probs=97.9
Q ss_pred HHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecc--cCCCCcchHHHHHHHHh-CCCeEEEEcCCCHHHHHH
Q 003103 449 HAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPL--FDPPRHDSAETIRRALN-LGVNVKMITGDQLAIGKE 525 (847)
Q Consensus 449 ~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~--~D~lr~~~~~~I~~l~~-aGI~v~miTGD~~~tA~~ 525 (847)
+...+.|...-.|.+++-+.. +++....- ...+.+++.+++++|.+ .|+.|+++||........
T Consensus 481 ~~~~~~y~~~~~rLi~~D~DG-------------TL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~ 547 (726)
T PRK14501 481 EEIIARYRAASRRLLLLDYDG-------------TLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLER 547 (726)
T ss_pred HHHHHHHHhccceEEEEecCc-------------cccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHH
Confidence 344455555566777776643 33322110 12356899999999999 699999999999988877
Q ss_pred HHHHcCCCC---CCC----CCCc---ccC----------------------cccc---cc------CCcch--------H
Q 003103 526 TGRRLGMGT---NMY----PSSS---LLG----------------------QDKD---AS------IAALP--------V 556 (847)
Q Consensus 526 iA~~~Gi~~---~~~----~~~~---~~~----------------------~~~~---~~------~~~~~--------~ 556 (847)
.....++.- +.. +... ... ...+ .. ..+.+ +
T Consensus 548 ~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l 627 (726)
T PRK14501 548 WFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANEL 627 (726)
T ss_pred HhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHH
Confidence 665555310 000 0000 000 0000 00 00111 1
Q ss_pred HHHHHh----c--Ce-----EEEeCh--hhHHHHHHHHhhc--CCEEEEEcCCcCChhhhhhc---CcceecccccHHHh
Q 003103 557 DELIEK----A--DG-----FAGVFP--EHKYEIVKRLQER--KHICGMTGDGVNDAPALKKA---DIGIAVADATDAAR 618 (847)
Q Consensus 557 ~~~~~~----~--~v-----~ar~sP--~qK~~iV~~lq~~--g~~V~miGDG~ND~~aLk~A---dVGIamg~g~~~a~ 618 (847)
.+.+.. . .+ +-.+.| -+|...++.+.+. ...|+++||+.||.+|++.+ ..+|+||++ +
T Consensus 628 ~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~ 703 (726)
T PRK14501 628 ILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----E 703 (726)
T ss_pred HHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----C
Confidence 111111 0 11 113334 4788888888874 24799999999999999987 578888864 4
Q ss_pred hccCEEEcCCChhhHHHHH
Q 003103 619 SASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 619 ~aaDivl~~~~~~~i~~~i 637 (847)
.+|++.+.+. ..+...+
T Consensus 704 s~A~~~l~~~--~eV~~~L 720 (726)
T PRK14501 704 SRARYRLPSQ--REVRELL 720 (726)
T ss_pred CcceEeCCCH--HHHHHHH
Confidence 6788888543 4444444
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.017 Score=59.55 Aligned_cols=111 Identities=15% Similarity=0.181 Sum_probs=69.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.||+.++++.|++.|+++.++|+.....+...-+..|+.. .. .+.+.+. ..+..|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~---~~-~i~~~~~------------------~~~~KP~ 140 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA---PE-VFVTAER------------------VKRGKPE 140 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC---cc-EEEEHHH------------------hcCCCCC
Confidence 568999999999999999999999987766655555666631 00 1111000 1112232
Q ss_pred --hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc-eeccccc-HHHhhccCEEE
Q 003103 573 --HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADAT-DAARSASDIVL 625 (847)
Q Consensus 573 --qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~g~-~~a~~aaDivl 625 (847)
-=....+.+.-....+.|+||..+|+.|-++|++- |++..+. ......+|+++
T Consensus 141 p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~ 197 (218)
T PRK11587 141 PDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVL 197 (218)
T ss_pred cHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEe
Confidence 22222233332346789999999999999999984 5554332 22334577776
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.01 Score=61.64 Aligned_cols=87 Identities=23% Similarity=0.278 Sum_probs=62.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGD----QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD----~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 568 (847)
.|.+++.+.++.+++.|+++.++||. ...++..+.+..|++....- .. +++.
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f-~v-----------------------il~g 169 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMN-PV-----------------------IFAG 169 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccce-eE-----------------------EEcC
Confidence 46788999999999999999999995 36688999988999421100 01 1221
Q ss_pred eCh--hhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc
Q 003103 569 VFP--EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (847)
Q Consensus 569 ~sP--~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG 607 (847)
-++ .+|.. .+++.| .+.|+||..+|..|-++|++-
T Consensus 170 d~~~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 170 DKPGQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred CCCCCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCc
Confidence 111 34544 444555 478999999999999999884
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.018 Score=59.39 Aligned_cols=97 Identities=16% Similarity=0.136 Sum_probs=64.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.++++.|++.|+++.++|+-+...+...-+.+|+.... + ..+.+.+ ..+..|.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f-~-~i~~~~~-------------------~~~~KP~ 152 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF-D-AVITSEE-------------------EGVEKPH 152 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc-c-EEEEecc-------------------CCCCCCC
Confidence 57899999999999999999999998887777777888874311 0 0110000 1122332
Q ss_pred hHHHHHHHHhhc---CCEEEEEcCCc-CChhhhhhcCc-ceecc
Q 003103 573 HKYEIVKRLQER---KHICGMTGDGV-NDAPALKKADI-GIAVA 611 (847)
Q Consensus 573 qK~~iV~~lq~~---g~~V~miGDG~-ND~~aLk~AdV-GIamg 611 (847)
.. .+-+.+++. ...+.|+||.. +|+.+-++|++ .|.+.
T Consensus 153 ~~-~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 153 PK-IFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HH-HHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 22 233444444 35689999998 99999999987 44444
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.011 Score=56.96 Aligned_cols=112 Identities=13% Similarity=0.057 Sum_probs=67.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
.++|+-++.++.+++.+++++++|+--.--...+-.+++=.......... .+.. .......-.++... -..--.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~-sn~~--~ih~dg~h~i~~~~---ds~fG~ 146 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIV-SNND--YIHIDGQHSIKYTD---DSQFGH 146 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEe-ecCc--eEcCCCceeeecCC---ccccCC
Confidence 46899999999999999999999876654444444444310000000000 0000 00000000000000 011235
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceec
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIam 610 (847)
+|...|+.+++..+.+-|||||+.|..|-+.+|+=.|=
T Consensus 147 dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 147 DKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred CcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 89999999999999999999999999998888876653
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.032 Score=55.66 Aligned_cols=128 Identities=20% Similarity=0.087 Sum_probs=69.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHH---------------HHHHHHHHcCCCCCCCCCCcccCccccccCCcchHH
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLA---------------IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~---------------tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (847)
.+.||+.+++++|++.|+++.++|+.+.. ....+-++.|+.- . ..+..... ..++
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f---~-~i~~~~~~----~~~~-- 98 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRL---D-GIYYCPHH----PEDG-- 98 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCcc---c-eEEECCCC----CCCC--
Confidence 35799999999999999999999987621 1111223344410 0 00000000 0000
Q ss_pred HHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcce-ecccccH---HHhhcc--CEEEcCCChh
Q 003103 558 ELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AVADATD---AARSAS--DIVLTEPGLS 631 (847)
Q Consensus 558 ~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGI-amg~g~~---~a~~aa--Divl~~~~~~ 631 (847)
.-..+-.|+--....+.+.-..+.+.|+||..+|+.+-++|++.. .+..|.. .....+ |.++ +++.
T Consensus 99 ------~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~ 170 (181)
T PRK08942 99 ------CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLA 170 (181)
T ss_pred ------CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHH
Confidence 001112233223334444434467899999999999999999742 2223321 112235 7777 5677
Q ss_pred hHHHHHH
Q 003103 632 VIISAVL 638 (847)
Q Consensus 632 ~i~~~i~ 638 (847)
.+.+.+.
T Consensus 171 el~~~l~ 177 (181)
T PRK08942 171 DLPQALK 177 (181)
T ss_pred HHHHHHH
Confidence 7666553
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.026 Score=60.81 Aligned_cols=119 Identities=18% Similarity=0.148 Sum_probs=70.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC-CcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS-SSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
++.|++.+.++.|++.|+++.++|+-+......+-+..+.... ... ..+ +.+ -+.+..|
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~-~~~~~~v-~~~------------------~~~~~KP 203 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPER-AQGLDVF-AGD------------------DVPKKKP 203 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccc-cCceEEE-ecc------------------ccCCCCC
Confidence 5689999999999999999999999887766655444432110 000 001 000 0111122
Q ss_pred hh--HHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecc-ccc--HHHhhccCEEEcCCChhhH
Q 003103 572 EH--KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DAT--DAARSASDIVLTEPGLSVI 633 (847)
Q Consensus 572 ~q--K~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg-~g~--~~a~~aaDivl~~~~~~~i 633 (847)
+- =..+.+.+.-....+.||||+.+|+.|-++|++....- .|. .-....+|+++ +++..+
T Consensus 204 ~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi--~~~~~l 268 (286)
T PLN02779 204 DPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVF--DCLGDV 268 (286)
T ss_pred CHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEE--CChhhc
Confidence 21 12233333333456899999999999999999865442 322 11123578887 444443
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.023 Score=61.74 Aligned_cols=108 Identities=12% Similarity=0.049 Sum_probs=74.6
Q ss_pred ccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEe
Q 003103 490 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (847)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 569 (847)
..+++.+++.++++.|++.|+++.++||.....+..+.+.+|+..... ..+.+.+. ....+.... -.+-
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f--~~i~~~~~--------~~~~~~~~~-~~kp 252 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWF--DDLIGRPP--------DMHFQREQG-DKRP 252 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCch--hhhhCCcc--------hhhhcccCC-CCCC
Confidence 568899999999999999999999999999999999999998753111 11111110 000000000 1234
Q ss_pred ChhhHHHHHHHHhh-cCCEEEEEcCCcCChhhhhhcCcce
Q 003103 570 FPEHKYEIVKRLQE-RKHICGMTGDGVNDAPALKKADIGI 608 (847)
Q Consensus 570 sP~qK~~iV~~lq~-~g~~V~miGDG~ND~~aLk~AdVGI 608 (847)
.|+-+....+.+-. .-..+.|+||..+|+.|-+.|++-.
T Consensus 253 ~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 253 DDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred cHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 46667766666533 2367899999999999999998864
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.032 Score=61.81 Aligned_cols=118 Identities=14% Similarity=0.137 Sum_probs=77.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.||+.+.++.|++.|+++.++|+-....+..+-+..||..... .+.+.+. +.+-.|+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd---~Iv~sdd------------------v~~~KP~ 274 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFS---VIVAAED------------------VYRGKPD 274 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHce---EEEecCc------------------CCCCCCC
Confidence 467999999999999999999999999999999888899853110 0111000 0111232
Q ss_pred --hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCccee-cccccHHH-hhccCEEEcCCChhhH
Q 003103 573 --HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-VADATDAA-RSASDIVLTEPGLSVI 633 (847)
Q Consensus 573 --qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIa-mg~g~~~a-~~aaDivl~~~~~~~i 633 (847)
-=....+.+.-....+.|+||..+|+.|-+.|++-.. +..+.+.. ...||+++ +++..+
T Consensus 275 Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI--~s~~EL 337 (381)
T PLN02575 275 PEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVV--RRLDEL 337 (381)
T ss_pred HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEE--CCHHHH
Confidence 2123334444345679999999999999999998433 23332222 23588887 556555
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.027 Score=58.33 Aligned_cols=93 Identities=11% Similarity=-0.027 Sum_probs=61.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|++.|+++.++|+-+...+...-+..|+.... + ..+.+.+ +.+-.|+
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f-d-~iv~s~~-------------------~~~~KP~ 151 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL-D-LLLSTHT-------------------FGYPKED 151 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC-C-EEEEeee-------------------CCCCCCC
Confidence 56899999999999999999999998888877776777774211 0 0110000 1111222
Q ss_pred hHHHHHHHHhhc---CCEEEEEcCCcCChhhhhhcCcc
Q 003103 573 HKYEIVKRLQER---KHICGMTGDGVNDAPALKKADIG 607 (847)
Q Consensus 573 qK~~iV~~lq~~---g~~V~miGDG~ND~~aLk~AdVG 607 (847)
- .-+.+.+++. ...+.|+||..+|+.|-++|++.
T Consensus 152 p-~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 152 Q-RLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIR 188 (224)
T ss_pred H-HHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCe
Confidence 1 1122223333 34589999999999999999996
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.035 Score=57.24 Aligned_cols=120 Identities=12% Similarity=0.085 Sum_probs=73.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|++. +++.++|+-....+..+-++.|+.... + ..+...+ ..+..|+
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f-d-~i~~~~~-------------------~~~~KP~ 154 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF-D-DIFVSED-------------------AGIQKPD 154 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc-C-EEEEcCc-------------------cCCCCCC
Confidence 5689999999999999 999999998888888888888885321 0 0110000 0011232
Q ss_pred hH--HHHHHHH-hhcCCEEEEEcCCc-CChhhhhhcCcc-eec--ccccHHHhhccCEEEcCCChhhHHHH
Q 003103 573 HK--YEIVKRL-QERKHICGMTGDGV-NDAPALKKADIG-IAV--ADATDAARSASDIVLTEPGLSVIISA 636 (847)
Q Consensus 573 qK--~~iV~~l-q~~g~~V~miGDG~-ND~~aLk~AdVG-Iam--g~g~~~a~~aaDivl~~~~~~~i~~~ 636 (847)
.. ....+.+ .-....+.|+||.. +|..+-+++++- |.. +..+......+|.++ ++++.+...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~~ 223 (224)
T TIGR02254 155 KEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYEI 223 (224)
T ss_pred HHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHhh
Confidence 22 2222333 22234589999998 899999999973 333 222212223566666 556665543
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.027 Score=57.00 Aligned_cols=94 Identities=15% Similarity=0.154 Sum_probs=62.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+++++|++.|+++.++|+-+........+.+|+.... + ..+...+ ..+..|+
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f-d-~i~~s~~-------------------~~~~KP~ 150 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF-D-AVLSADA-------------------VRAYKPA 150 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh-h-eeEehhh-------------------cCCCCCC
Confidence 46899999999999999999999998888888888888874211 0 0110000 1112233
Q ss_pred hH--HHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc
Q 003103 573 HK--YEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (847)
Q Consensus 573 qK--~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG 607 (847)
.. ..+.+.+.-....+.|+||+.+|+.+-++|++-
T Consensus 151 ~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 151 PQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred HHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 21 122233332345688999999999999988875
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.054 Score=50.85 Aligned_cols=92 Identities=16% Similarity=0.149 Sum_probs=60.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCC--------HHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhc
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQ--------LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~--------~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (847)
-++.|++.++++.|+++|+++.++|+.. ........+++|+..... ...+ .
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~-~----------------- 82 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVL---YACP-H----------------- 82 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEE---EECC-C-----------------
Confidence 3678999999999999999999999988 667777888888742100 0000 0
Q ss_pred CeEEEeChhhHHHHHHHHh-hcCCEEEEEcC-CcCChhhhhhcCc
Q 003103 564 DGFAGVFPEHKYEIVKRLQ-ERKHICGMTGD-GVNDAPALKKADI 606 (847)
Q Consensus 564 ~v~ar~sP~qK~~iV~~lq-~~g~~V~miGD-G~ND~~aLk~AdV 606 (847)
..+-.|+-=..+.+.++ -....+.|+|| -.+|..+-++|++
T Consensus 83 --~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 83 --CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred --CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCC
Confidence 00111121123334442 33466999999 5899999998876
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.15 Score=48.85 Aligned_cols=109 Identities=15% Similarity=0.172 Sum_probs=75.8
Q ss_pred HHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC
Q 003103 452 IDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 531 (847)
Q Consensus 452 ~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~G 531 (847)
.+.+.++|.|.+.+-... +++..= ....-|++++-+++++.+|+++.++|.-++..+..+++.+|
T Consensus 20 ~~~L~~~Gikgvi~DlDN-------------TLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~ 84 (175)
T COG2179 20 PDILKAHGIKGVILDLDN-------------TLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLG 84 (175)
T ss_pred HHHHHHcCCcEEEEeccC-------------ceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcC
Confidence 467888999998775432 333221 23345788889999999999999999999999999999999
Q ss_pred CCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcC---CEEEEEcCCc-CChhhhhhcCc
Q 003103 532 MGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERK---HICGMTGDGV-NDAPALKKADI 606 (847)
Q Consensus 532 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g---~~V~miGDG~-ND~~aLk~AdV 606 (847)
++- ++--..|-- ..+-+++++.+ +.|+|+||-. .|+-+=+.|++
T Consensus 85 v~f------------------------------i~~A~KP~~-~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 85 VPF------------------------------IYRAKKPFG-RAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred Cce------------------------------eecccCccH-HHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 852 111122333 24556666653 5699999986 57765555544
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.054 Score=53.49 Aligned_cols=110 Identities=6% Similarity=-0.037 Sum_probs=68.7
Q ss_pred EEEecccCCCCcchHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhc
Q 003103 485 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGD-QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563 (847)
Q Consensus 485 lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD-~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (847)
.....-+-++.|++.++++.|+++|+++.++|+- ....+..+-..+|+.... .. ..+....+ .
T Consensus 37 ~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~---~~------------~~~~~~Fd-~ 100 (174)
T TIGR01685 37 IDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAG---KT------------VPMHSLFD-D 100 (174)
T ss_pred EeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCC---Cc------------ccHHHhce-e
Confidence 3344445577899999999999999999999965 888888888888874100 00 00000000 0
Q ss_pred CeEEEeChhhH--HHHHHHHhhc------CCEEEEEcCCcCChhhhhhcCcceec
Q 003103 564 DGFAGVFPEHK--YEIVKRLQER------KHICGMTGDGVNDAPALKKADIGIAV 610 (847)
Q Consensus 564 ~v~ar~sP~qK--~~iV~~lq~~------g~~V~miGDG~ND~~aLk~AdVGIam 610 (847)
.+.+.-.+..| ..+.+.+.+. -..+.|+||...|+.|-++|++-...
T Consensus 101 iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 101 RIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred eeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 01111111112 2334544432 25689999999999999988885544
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.028 Score=56.00 Aligned_cols=91 Identities=9% Similarity=0.031 Sum_probs=57.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.++++.|+++|+++.++|+... +...-+..|+.... + ..+.+.+ ..+..|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f-~-~~~~~~~-------------------~~~~kp~ 143 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF-D-AIVDPAE-------------------IKKGKPD 143 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC-c-EEEehhh-------------------cCCCCCC
Confidence 5689999999999999999999997532 34566777774311 0 0010000 1112232
Q ss_pred hHHHHHHHHhhcC---CEEEEEcCCcCChhhhhhcCcc
Q 003103 573 HKYEIVKRLQERK---HICGMTGDGVNDAPALKKADIG 607 (847)
Q Consensus 573 qK~~iV~~lq~~g---~~V~miGDG~ND~~aLk~AdVG 607 (847)
...+-+.+++.| ..+.|+||..+|+.|-++|++-
T Consensus 144 -p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 144 -PEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred -hHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 222223344333 4588999999999999999873
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.048 Score=56.34 Aligned_cols=120 Identities=15% Similarity=0.119 Sum_probs=73.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.++++.|+ .|+++.++|+.....+...-++.|+.... + ..+.+.+ .....|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f-d-~v~~~~~-------------------~~~~KP~ 152 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF-D-LLVISEQ-------------------VGVAKPD 152 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc-C-EEEEECc-------------------cCCCCCC
Confidence 46899999999999 68999999998888777777777874211 0 0000000 0011232
Q ss_pred hHHHHHHHHhhcC----CEEEEEcCCc-CChhhhhhcCcc-eecc-cccH-HHhhccCEEEcCCChhhHHHHH
Q 003103 573 HKYEIVKRLQERK----HICGMTGDGV-NDAPALKKADIG-IAVA-DATD-AARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 573 qK~~iV~~lq~~g----~~V~miGDG~-ND~~aLk~AdVG-Iamg-~g~~-~a~~aaDivl~~~~~~~i~~~i 637 (847)
. .-+-+.+++.| ..+.||||.. +|+.+-++|++- |.+. .+.. .....+|+++ +++..+.+.+
T Consensus 153 p-~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 153 V-AIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred H-HHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 1 22233344333 4689999998 799999999985 3333 2221 1112478877 5577666544
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.019 Score=56.23 Aligned_cols=95 Identities=18% Similarity=0.211 Sum_probs=65.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
.++.|++.+.++.|++.|++++++|+-.........++.|+... . ...+...+. ....|
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~-f-~~i~~~~~~-------------------~~~Kp 134 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY-F-DEIISSDDV-------------------GSRKP 134 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG-C-SEEEEGGGS-------------------SSSTT
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc-c-ccccccchh-------------------hhhhh
Confidence 45689999999999999999999999999999999999998521 1 111111100 00112
Q ss_pred h--hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc
Q 003103 572 E--HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (847)
Q Consensus 572 ~--qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG 607 (847)
+ -=..+.+.+.-....+.|+||..+|..+-++|++-
T Consensus 135 ~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 135 DPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp SHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 2 11233444433456689999999999999988764
|
... |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.078 Score=52.58 Aligned_cols=94 Identities=16% Similarity=0.164 Sum_probs=59.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+.... + ..+.+.+. ...+-.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f-~-~i~~~~~~-----------------~~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF-D-VVIFSGDV-----------------GRGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC-C-EEEEcCCC-----------------CCCCCCHH
Confidence 578999999999999999999999988776 5555557774211 0 00100000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCc
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI 606 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV 606 (847)
-=..+.+.+.-....+.|+||...|+.|-++|++
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 2223333333345678899999999998888876
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.028 Score=56.08 Aligned_cols=92 Identities=12% Similarity=0.124 Sum_probs=58.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
-++.||+.++++.|++.|+++.++|+- ..+..+-+..|+..-. + ..+ +.+. ..+..|
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f-~-~v~-~~~~------------------~~~~kp 143 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF-D-AIV-DADE------------------VKEGKP 143 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC-C-Eee-ehhh------------------CCCCCC
Confidence 367899999999999999999999986 4566677778874211 0 000 0000 011223
Q ss_pred hhHHHHHHHHhhc---CCEEEEEcCCcCChhhhhhcCcc
Q 003103 572 EHKYEIVKRLQER---KHICGMTGDGVNDAPALKKADIG 607 (847)
Q Consensus 572 ~qK~~iV~~lq~~---g~~V~miGDG~ND~~aLk~AdVG 607 (847)
... .+-+.+++. ...+.|+||..+|+.+-++|++.
T Consensus 144 ~~~-~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 144 HPE-TFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred ChH-HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 221 122333333 34578999999999999998874
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.2 Score=48.71 Aligned_cols=103 Identities=14% Similarity=0.168 Sum_probs=65.8
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHH---HHHHHc---C--CCCCCCCCCcccCccccccCCcchHHHHHHh
Q 003103 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK---ETGRRL---G--MGTNMYPSSSLLGQDKDASIAALPVDELIEK 562 (847)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~---~iA~~~---G--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (847)
+|.+.++++++++++++.|+++..+||.....+. ....++ | ++. ..+..... ..+.. ..+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~-----g~li~~~g------~~~~~-~~~ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH-----GPVLLSPD------RLFAA-LHR 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC-----ceEEEcCC------cchhh-hhc
Confidence 4788999999999999999999999999987764 444442 3 321 11110000 00000 000
Q ss_pred cCeEEEeChh-hHHHHHHHHhh-----cCCEEEEEcCCcCChhhhhhcCcc
Q 003103 563 ADGFAGVFPE-HKYEIVKRLQE-----RKHICGMTGDGVNDAPALKKADIG 607 (847)
Q Consensus 563 ~~v~ar~sP~-qK~~iV~~lq~-----~g~~V~miGDG~ND~~aLk~AdVG 607 (847)
.+. .-.|+ .|...++.+++ ....++..||+.+|+.|-++++|-
T Consensus 93 -e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 93 -EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred -ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 112 22343 48888887776 356788899999999998876654
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=94.66 E-value=0.082 Score=55.61 Aligned_cols=45 Identities=29% Similarity=0.347 Sum_probs=35.7
Q ss_pred hhHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHH
Q 003103 572 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDA 616 (847)
Q Consensus 572 ~qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~ 616 (847)
..|..-|+.|+++ | +.|..+||+.||.+||..++-||.++++.+.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e 212 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPE 212 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHH
Confidence 4799988888876 2 3467799999999999999999999987666
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.047 Score=61.33 Aligned_cols=111 Identities=15% Similarity=0.152 Sum_probs=68.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH-HcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR-RLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~-~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
++.|++.+.++.|++.|+++.++|+-....+...-+ ..|+.... + .+.+.+. ..+..|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F-d--~ii~~d~------------------v~~~KP 151 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF-S--VIVGGDE------------------VEKGKP 151 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC-C--EEEehhh------------------cCCCCC
Confidence 457999999999999999999999998877766554 56763211 0 0000000 111223
Q ss_pred hhHHHHHHHHhh---cCCEEEEEcCCcCChhhhhhcCccee-cccc--cHHHhhccCEEE
Q 003103 572 EHKYEIVKRLQE---RKHICGMTGDGVNDAPALKKADIGIA-VADA--TDAARSASDIVL 625 (847)
Q Consensus 572 ~qK~~iV~~lq~---~g~~V~miGDG~ND~~aLk~AdVGIa-mg~g--~~~a~~aaDivl 625 (847)
+. ..+.+.+++ ..+.+.|+||..+|+.|-++|++... +..+ .......+|.++
T Consensus 152 ~p-~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i 210 (382)
T PLN02940 152 SP-DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI 210 (382)
T ss_pred CH-HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe
Confidence 21 222333333 34568999999999999999998633 3332 222334566665
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=94.48 E-value=0.026 Score=59.44 Aligned_cols=58 Identities=26% Similarity=0.373 Sum_probs=48.3
Q ss_pred EeCh--hhHHHHHHHHhhcCCEEEEEcC----CcCChhhhhhc-CcceecccccHHHhhccCEEE
Q 003103 568 GVFP--EHKYEIVKRLQERKHICGMTGD----GVNDAPALKKA-DIGIAVADATDAARSASDIVL 625 (847)
Q Consensus 568 r~sP--~qK~~iV~~lq~~g~~V~miGD----G~ND~~aLk~A-dVGIamg~g~~~a~~aaDivl 625 (847)
.+.| -+|..-++.|.+....|+++|| |.||.+||+.| -.|++++++++..|..+.+++
T Consensus 181 eI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 181 DVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred EeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 4444 4899999999887788999999 99999999987 688888899999988776543
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=94.42 E-value=0.15 Score=50.31 Aligned_cols=85 Identities=13% Similarity=0.108 Sum_probs=59.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeC
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQ-LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~-~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~s 570 (847)
..+-+++.++++.|++.|+++.++|+.+ ...+..+.+.+|+... +....
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~------------------------------~~~~K 91 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL------------------------------PHAVK 91 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE------------------------------cCCCC
Confidence 3577999999999999999999999987 5667777777776310 00112
Q ss_pred hhhHHHHHHHHhhc---CCEEEEEcCCc-CChhhhhhcCcc
Q 003103 571 PEHKYEIVKRLQER---KHICGMTGDGV-NDAPALKKADIG 607 (847)
Q Consensus 571 P~qK~~iV~~lq~~---g~~V~miGDG~-ND~~aLk~AdVG 607 (847)
|... .+-..+++. ...+.|+||.. .|..+-++|++-
T Consensus 92 P~p~-~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 92 PPGC-AFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred CChH-HHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 3211 222333333 34589999998 799999999883
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.21 E-value=0.54 Score=52.23 Aligned_cols=68 Identities=25% Similarity=0.200 Sum_probs=47.8
Q ss_pred EEeChh---hHHHHHHHHhhc-C-----C-EEEEEcCCcCChhhhhh-----cCcceecccccHHHhhccCEEEcCCChh
Q 003103 567 AGVFPE---HKYEIVKRLQER-K-----H-ICGMTGDGVNDAPALKK-----ADIGIAVADATDAARSASDIVLTEPGLS 631 (847)
Q Consensus 567 ar~sP~---qK~~iV~~lq~~-g-----~-~V~miGDG~ND~~aLk~-----AdVGIamg~g~~~a~~aaDivl~~~~~~ 631 (847)
-.+.|. +|..-|+.+.+. | . .+.++||+.||-.|++. +++||+|++|... ..|++-| ++-.
T Consensus 292 lEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~--t~A~y~L--~dp~ 367 (384)
T PLN02580 292 LEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKE--SNAFYSL--RDPS 367 (384)
T ss_pred EEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCC--ccceEEc--CCHH
Confidence 355664 898888877654 2 1 35899999999999996 6899999876542 2577887 4455
Q ss_pred hHHHHHH
Q 003103 632 VIISAVL 638 (847)
Q Consensus 632 ~i~~~i~ 638 (847)
.+...+.
T Consensus 368 eV~~~L~ 374 (384)
T PLN02580 368 EVMEFLK 374 (384)
T ss_pred HHHHHHH
Confidence 5555443
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=93.96 E-value=0.21 Score=49.49 Aligned_cols=26 Identities=12% Similarity=0.248 Sum_probs=23.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCC
Q 003103 494 PRHDSAETIRRALNLGVNVKMITGDQ 519 (847)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~ 519 (847)
+.|++.+++++|+++|+++.++|.-.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~ 52 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQS 52 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 56899999999999999999999765
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=93.81 E-value=0.065 Score=51.69 Aligned_cols=88 Identities=23% Similarity=0.340 Sum_probs=54.9
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhh
Q 003103 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (847)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~q 573 (847)
..+++.+.++.|++.|+++.++|+-....+....+.. +... .. .+.+.+ . .. ..|+
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~-f~--~i~~~~-----------------~-~~-~Kp~- 120 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY-FD--LILGSD-----------------E-FG-AKPE- 120 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc-Cc--EEEecC-----------------C-CC-CCcC-
Confidence 3479999999999999999999999888887776664 3211 00 010000 0 01 1221
Q ss_pred HHHHHHHHhhcCC--EEEEEcCCcCChhhhhhcC
Q 003103 574 KYEIVKRLQERKH--ICGMTGDGVNDAPALKKAD 605 (847)
Q Consensus 574 K~~iV~~lq~~g~--~V~miGDG~ND~~aLk~Ad 605 (847)
...+.+.+++.|. .+.|+||..+|..|-++|+
T Consensus 121 ~~~~~~~~~~~~~~~~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 121 PEIFLAALESLGLPPEVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHHHcCCCCCEEEEeCCHHHHHHHHHcc
Confidence 1222233333222 6899999999998887764
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=93.75 E-value=0.3 Score=51.64 Aligned_cols=86 Identities=14% Similarity=0.107 Sum_probs=57.9
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHH---HHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEE
Q 003103 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLA---IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (847)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~---tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 567 (847)
..++-|++.+.++.+++.|+++.++|+-... .+...-++.|+.... .. .++.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~--~d-----------------------~lll 170 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQAD--EE-----------------------HLLL 170 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCC--cc-----------------------eEEe
Confidence 3557899999999999999999999997633 333455667875311 00 1233
Q ss_pred EeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhh
Q 003103 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPAL 601 (847)
Q Consensus 568 r~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aL 601 (847)
|-....|..-.+.+.+.-.+++++||-.+|....
T Consensus 171 r~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 171 KKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred CCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence 3222345555556666667899999999998644
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=93.67 E-value=0.13 Score=49.43 Aligned_cols=96 Identities=17% Similarity=0.118 Sum_probs=57.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHH
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~---------------~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (847)
++.|++.++++.|++.|+++.++|+.+. .....+.+.+|+.....-.. ..+....
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~~--------- 96 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFC-PHHPADN--------- 96 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEC-CCCCCCC---------
Confidence 4689999999999999999999998652 34455667777641000000 0000000
Q ss_pred HHHHhcCeEEEeChhhHHHHHHHHhhc---CCEEEEEcCCcCChhhhhhcCcc
Q 003103 558 ELIEKADGFAGVFPEHKYEIVKRLQER---KHICGMTGDGVNDAPALKKADIG 607 (847)
Q Consensus 558 ~~~~~~~v~ar~sP~qK~~iV~~lq~~---g~~V~miGDG~ND~~aLk~AdVG 607 (847)
... ..|+-+ .+-+.+++. .+.+.||||...|..+-+.|++-
T Consensus 97 -------~~~-~KP~~~-~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 97 -------CSC-RKPKPG-LILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred -------CCC-CCCCHH-HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 000 123221 222333333 35689999999999998888774
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=93.30 E-value=0.83 Score=47.85 Aligned_cols=48 Identities=15% Similarity=0.217 Sum_probs=37.6
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHH--HHHHHcCCC
Q 003103 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK--ETGRRLGMG 533 (847)
Q Consensus 486 G~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~--~iA~~~Gi~ 533 (847)
|.+.-.+.+-|++.++++.|+++|+++.++|.-....+. ...+++|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 555666788999999999999999999999985544333 455778874
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=93.29 E-value=0.21 Score=51.69 Aligned_cols=106 Identities=21% Similarity=0.191 Sum_probs=66.4
Q ss_pred CCCcchHHHHHHH--HhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeC
Q 003103 493 PPRHDSAETIRRA--LNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (847)
Q Consensus 493 ~lr~~~~~~I~~l--~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~s 570 (847)
|+.|+.++.++.+ ++.|+.+.++|.-|..--..+=+.-|+..... ...+.....+.-....+.... ..-+.++.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~--~I~TNpa~~~~~G~l~v~pyh--~h~C~~C~ 146 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFS--EIFTNPACFDADGRLRVRPYH--SHGCSLCP 146 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccc--eEEeCCceecCCceEEEeCcc--CCCCCcCC
Confidence 5678999999999 56899999999999888888888888753210 011000000000000000000 01244665
Q ss_pred hh-hHHHHHHHHhhc----C---CEEEEEcCCcCCh-hhhh
Q 003103 571 PE-HKYEIVKRLQER----K---HICGMTGDGVNDA-PALK 602 (847)
Q Consensus 571 P~-qK~~iV~~lq~~----g---~~V~miGDG~ND~-~aLk 602 (847)
|. =|..+++.+++. | ..|.++|||.||- |+++
T Consensus 147 ~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~ 187 (234)
T PF06888_consen 147 PNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALR 187 (234)
T ss_pred CccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccc
Confidence 53 799999988875 4 6899999999996 4443
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.04 E-value=0.17 Score=53.19 Aligned_cols=67 Identities=19% Similarity=0.183 Sum_probs=48.0
Q ss_pred EEeChhhHHHHHHHHhhc----CCEEEEEcCCcCChhhhhhc--------CcceecccccHHHhhccCEEEcCCChhhHH
Q 003103 567 AGVFPEHKYEIVKRLQER----KHICGMTGDGVNDAPALKKA--------DIGIAVADATDAARSASDIVLTEPGLSVII 634 (847)
Q Consensus 567 ar~sP~qK~~iV~~lq~~----g~~V~miGDG~ND~~aLk~A--------dVGIamg~g~~~a~~aaDivl~~~~~~~i~ 634 (847)
.+..+.+|...++.+.++ ...+.|+||+.||.+|++.+ ..||+++.|. .+..|++++ ++...+.
T Consensus 161 ~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~--~~~~~v~ 236 (244)
T TIGR00685 161 LKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHL--TGPQQVL 236 (244)
T ss_pred EeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeC--CCHHHHH
Confidence 344566888877776554 34689999999999999999 4778885443 356788988 4566655
Q ss_pred HHH
Q 003103 635 SAV 637 (847)
Q Consensus 635 ~~i 637 (847)
+.+
T Consensus 237 ~~L 239 (244)
T TIGR00685 237 EFL 239 (244)
T ss_pred HHH
Confidence 554
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=92.84 E-value=0.22 Score=50.50 Aligned_cols=91 Identities=13% Similarity=0.095 Sum_probs=56.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++-|++.++++.|++.|+++.++|+-... .....+..|+.... + ..+...+ +....|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f-d-~i~~s~~-------------------~~~~KP~ 162 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF-D-FVVTSYE-------------------VGAEKPD 162 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc-c-eEEeecc-------------------cCCCCCC
Confidence 56799999999999999999999976543 45666777773211 0 0000000 0001222
Q ss_pred hHHHHHHHHhhc---CCEEEEEcCCc-CChhhhhhcCc
Q 003103 573 HKYEIVKRLQER---KHICGMTGDGV-NDAPALKKADI 606 (847)
Q Consensus 573 qK~~iV~~lq~~---g~~V~miGDG~-ND~~aLk~AdV 606 (847)
- .-+-+.+++. ...+.||||+. +|+.+-++|++
T Consensus 163 ~-~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 163 P-KIFQEALERAGISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred H-HHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCC
Confidence 1 2223334433 35689999997 89998888775
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.73 E-value=0.27 Score=54.18 Aligned_cols=97 Identities=12% Similarity=0.064 Sum_probs=57.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchH
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGD---------------QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPV 556 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD---------------~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~ 556 (847)
-++.|++.+++++|++.|+++.++|+- ....+..+.+..|+.-+ ..+.+.... ++
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd----~i~i~~~~~---sd--- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFD----EVLICPHFP---ED--- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCcee----eEEEeCCcC---cc---
Confidence 467899999999999999999999982 12234455566665310 000000000 00
Q ss_pred HHHHHhcCeEEEeChhhHHHHHHHH-hhc---CCEEEEEcCCcCChhhhhhcCcce
Q 003103 557 DELIEKADGFAGVFPEHKYEIVKRL-QER---KHICGMTGDGVNDAPALKKADIGI 608 (847)
Q Consensus 557 ~~~~~~~~v~ar~sP~qK~~iV~~l-q~~---g~~V~miGDG~ND~~aLk~AdVGI 608 (847)
...+| .|+ ..++..+ ++. ...+.||||+.+|..+-+.|++-.
T Consensus 99 -------~~~~r-KP~--p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~ 144 (354)
T PRK05446 99 -------NCSCR-KPK--TGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKG 144 (354)
T ss_pred -------cCCCC-CCC--HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeE
Confidence 00011 232 2333332 222 367899999999999999988853
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=92.57 E-value=0.17 Score=49.40 Aligned_cols=97 Identities=12% Similarity=0.063 Sum_probs=56.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC---------------HHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHH
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQ---------------LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~---------------~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (847)
++-|++.+++++|++.|+++.++|.-. ......+.++.|+.- . ..+.+.... .+
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---d-~ii~~~~~~----~~--- 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF---D-DVLICPHFP----DD--- 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce---e-EEEECCCCC----CC---
Confidence 456899999999999999999999742 334555666677631 0 000000000 00
Q ss_pred HHHHhcCeEEEeChhhHHHHHH-HHhhcC---CEEEEEcCCcCChhhhhhcCccee
Q 003103 558 ELIEKADGFAGVFPEHKYEIVK-RLQERK---HICGMTGDGVNDAPALKKADIGIA 609 (847)
Q Consensus 558 ~~~~~~~v~ar~sP~qK~~iV~-~lq~~g---~~V~miGDG~ND~~aLk~AdVGIa 609 (847)
. .....|. ..+++ .+++.| ..+.|+||+.+|..+-++|++-..
T Consensus 98 ------~-~~~~KP~--~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 98 ------N-CDCRKPK--IKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred ------C-CCCCCCC--HHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 0 0001232 22222 223232 458899999999999999888543
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=92.45 E-value=0.11 Score=49.92 Aligned_cols=95 Identities=17% Similarity=0.007 Sum_probs=64.2
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeC
Q 003103 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (847)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~s 570 (847)
.-++||++.+.++.|+ .++++.+.|.-+...+..+-+.+|+..... ..+.+.+. +.+..
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f--~~i~~~~d------------------~~~~K 101 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFG--YRRLFRDE------------------CVFVK 101 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEe--eeEEECcc------------------ccccC
Confidence 3457999999999999 579999999999999999988888742110 11111100 11112
Q ss_pred hhhHHHHHHHHhh---cCCEEEEEcCCcCChhhhhhcCcceec
Q 003103 571 PEHKYEIVKRLQE---RKHICGMTGDGVNDAPALKKADIGIAV 610 (847)
Q Consensus 571 P~qK~~iV~~lq~---~g~~V~miGDG~ND~~aLk~AdVGIam 610 (847)
|. +.+.+++ ....+.|+||..+|..|-++|.|-|..
T Consensus 102 P~----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~ 140 (148)
T smart00577 102 GK----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKP 140 (148)
T ss_pred Ce----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecC
Confidence 32 4444443 346789999999999988877666543
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=92.16 E-value=0.23 Score=51.08 Aligned_cols=99 Identities=12% Similarity=0.053 Sum_probs=61.3
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC---CCCCCCCCCcccCccccccCCcchHHHHHHhcCeEE
Q 003103 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG---MGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (847)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~G---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 567 (847)
+-++.||+.+++++|+++|+++.++|..+......+-+..+ +... ++.... ..+..
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~--------------------f~~~fd-~~~g~ 151 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY--------------------FSGYFD-TTVGL 151 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh--------------------cceEEE-eCccc
Confidence 45789999999999999999999999988766655544432 2110 000000 00111
Q ss_pred EeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceec
Q 003103 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (847)
Q Consensus 568 r~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIam 610 (847)
.-.|+-=..+.+.+.-....++|+||...|+.|-++|++-...
T Consensus 152 KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 152 KTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred CCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 1112211233333333335689999999999999999986543
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=91.83 E-value=0.81 Score=47.10 Aligned_cols=88 Identities=18% Similarity=0.222 Sum_probs=54.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAI---GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~t---A~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 568 (847)
-|.-|++.++++.+++.|++|+++||..... +..--++.|+... ..+.-.... +. .+
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~----~~LiLR~~~----d~------------~~ 178 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW----KHLILRGLE----DS------------NK 178 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc----CeeeecCCC----CC------------Cc
Confidence 4778999999999999999999999998754 2222345676421 111000000 00 00
Q ss_pred eChhhHHHHHHHHhhcCC-EEEEEcCCcCChh
Q 003103 569 VFPEHKYEIVKRLQERKH-ICGMTGDGVNDAP 599 (847)
Q Consensus 569 ~sP~qK~~iV~~lq~~g~-~V~miGDG~ND~~ 599 (847)
..-+-|.+.=+.+.+.|+ +++.+||-.+|..
T Consensus 179 ~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 179 TVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred hHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 001226666667776764 6788999988863
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.65 E-value=1.3 Score=44.41 Aligned_cols=37 Identities=19% Similarity=0.147 Sum_probs=31.7
Q ss_pred chHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003103 497 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (847)
Q Consensus 497 ~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~ 533 (847)
.+.+.+.+|+++|++|+.+|.-....-...-+++|..
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 5778999999999999999988777777777788875
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=90.84 E-value=0.44 Score=49.09 Aligned_cols=96 Identities=14% Similarity=0.057 Sum_probs=55.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHH-HHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKE-TGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~-iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
++.|++.+.++.|++.|+++.++||-+...... ..+..|+..- .. ..+.+.+. -+.+..|
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~-f~-~i~~~~~~-----------------~~~~~KP 138 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSL-MH-HVVTGDDP-----------------EVKQGKP 138 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhh-CC-EEEECChh-----------------hccCCCC
Confidence 568999999999999999999999977543322 2222233110 00 00000000 0111122
Q ss_pred hhHHHHHHHHhhc------CCEEEEEcCCcCChhhhhhcCcce
Q 003103 572 EHKYEIVKRLQER------KHICGMTGDGVNDAPALKKADIGI 608 (847)
Q Consensus 572 ~qK~~iV~~lq~~------g~~V~miGDG~ND~~aLk~AdVGI 608 (847)
+- .-+.+++++. ...+.||||...|+.|-++|++-.
T Consensus 139 ~p-~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 139 AP-DIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred Cc-HHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeE
Confidence 21 1222333333 356999999999999999999854
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=90.76 E-value=0.85 Score=42.60 Aligned_cols=39 Identities=5% Similarity=0.034 Sum_probs=33.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHcC
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGD-QLAIGKETGRRLG 531 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD-~~~tA~~iA~~~G 531 (847)
++.+++.+.++.|++.|+++.++|+- .+..+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 7777766666665
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=90.61 E-value=0.88 Score=44.49 Aligned_cols=102 Identities=18% Similarity=0.198 Sum_probs=71.5
Q ss_pred HHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCe--EEEEcCC-------CHHHHHH
Q 003103 455 FAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVN--VKMITGD-------QLAIGKE 525 (847)
Q Consensus 455 ~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~--v~miTGD-------~~~tA~~ 525 (847)
+.+.|.|.+.+-... ++ ..-=++.+-|+..+.+++|++.+.. |.++|.- +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TL--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CC--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 667788888764432 10 0123577889999999999999874 9999986 4788999
Q ss_pred HHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhc-----CCEEEEEcCCc-CChh
Q 003103 526 TGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQER-----KHICGMTGDGV-NDAP 599 (847)
Q Consensus 526 iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~-----g~~V~miGDG~-ND~~ 599 (847)
+++.+|++- + .+..-.|.-..++.+.++.+ -+.++|+||-. -|+-
T Consensus 101 ~~~~lgIpv-------l----------------------~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPV-------L----------------------RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcE-------E----------------------EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 999999841 0 12234676666777877765 55699999974 4554
Q ss_pred h
Q 003103 600 A 600 (847)
Q Consensus 600 a 600 (847)
+
T Consensus 152 ~ 152 (168)
T PF09419_consen 152 M 152 (168)
T ss_pred H
Confidence 4
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=89.86 E-value=0.81 Score=44.89 Aligned_cols=39 Identities=8% Similarity=0.014 Sum_probs=30.7
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHH------------HHHHHHHHcCCC
Q 003103 495 RHDSAETIRRALNLGVNVKMITGDQLA------------IGKETGRRLGMG 533 (847)
Q Consensus 495 r~~~~~~I~~l~~aGI~v~miTGD~~~------------tA~~iA~~~Gi~ 533 (847)
-||+.++++.|+++|+++.++|.-... ....+-+.+|+.
T Consensus 44 ~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 44 YPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred cCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 489999999999999999999975431 345566777763
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=89.62 E-value=1.6 Score=54.12 Aligned_cols=67 Identities=7% Similarity=0.063 Sum_probs=44.5
Q ss_pred HHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHH-HhCCCeEEEEcCCCHHHHHHHHH
Q 003103 450 AVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRA-LNLGVNVKMITGDQLAIGKETGR 528 (847)
Q Consensus 450 ~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l-~~aGI~v~miTGD~~~tA~~iA~ 528 (847)
...+.|.....|.+++-|.. +++-.....-.+-+++.+++++| ++.|+.|.++||....+....-.
T Consensus 586 ~i~~~y~~~~~rlI~LDyDG-------------TLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~ 652 (854)
T PLN02205 586 HIVSAYKRTTTRAILLDYDG-------------TLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFS 652 (854)
T ss_pred HHHHHHHhhcCeEEEEecCC-------------cccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhC
Confidence 34445555566777665543 23211111235567899999997 77899999999999988777654
Q ss_pred H
Q 003103 529 R 529 (847)
Q Consensus 529 ~ 529 (847)
.
T Consensus 653 ~ 653 (854)
T PLN02205 653 P 653 (854)
T ss_pred C
Confidence 3
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=89.24 E-value=0.19 Score=51.41 Aligned_cols=89 Identities=12% Similarity=0.020 Sum_probs=53.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHH--HHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE-
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAI--GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG- 568 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~t--A~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar- 568 (847)
-++.|++.+.++.|++.|+++.++|+..... ........++... .+. +++.
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~------------------------fd~--v~~s~ 146 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMAL------------------------FDA--VVESC 146 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhh------------------------CCE--EEEee
Confidence 4578999999999999999999999865432 2222222333110 000 1110
Q ss_pred ----eChhhHHHHHHHHhhc---CCEEEEEcCCcCChhhhhhcCcc
Q 003103 569 ----VFPEHKYEIVKRLQER---KHICGMTGDGVNDAPALKKADIG 607 (847)
Q Consensus 569 ----~sP~qK~~iV~~lq~~---g~~V~miGDG~ND~~aLk~AdVG 607 (847)
..|+-. -+-..+++. ...+.|+||...|+.+=++|++-
T Consensus 147 ~~~~~KP~p~-~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 147 LEGLRKPDPR-IYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred ecCCCCCCHH-HHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 123321 122333333 35588999999999999998884
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.01 E-value=0.24 Score=50.93 Aligned_cols=95 Identities=12% Similarity=0.128 Sum_probs=58.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh-
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP- 571 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP- 571 (847)
++.|++.++++.| ++++.++|+.....+...=+..|+..... ...+.+.+ ..+-.|
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~-~~v~~~~~-------------------~~~~KP~ 144 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFP-DKLFSGYD-------------------IQRWKPD 144 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCc-ceEeeHHh-------------------cCCCCCC
Confidence 4568999999988 48999999998877777667777743210 00111000 001112
Q ss_pred -hhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceec
Q 003103 572 -EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (847)
Q Consensus 572 -~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIam 610 (847)
+-=....+.+.-....++|+||..+|..+=++|++....
T Consensus 145 p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 145 PALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 111122222222234589999999999999999987653
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.90 E-value=2.4 Score=42.63 Aligned_cols=106 Identities=20% Similarity=0.202 Sum_probs=65.4
Q ss_pred CCCcchHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHcCCCC-------CCC---CCCcccCccccccCCcchHHHHHH
Q 003103 493 PPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGT-------NMY---PSSSLLGQDKDASIAALPVDELIE 561 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI-~v~miTGD~~~tA~~iA~~~Gi~~-------~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 561 (847)
|+-|+..++|+.+++.|- .++++|--|..--..+-+..|+.+ |.. ..+.+.-. ...
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~----pyH--------- 150 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVR----PYH--------- 150 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEee----cCC---------
Confidence 567899999999999997 999999888776666767777632 110 00000000 000
Q ss_pred hcCeEEEeChh-hHHHHHHHHhhcC-------CEEEEEcCCcCCh-hhhhhcCcceecc
Q 003103 562 KADGFAGVFPE-HKYEIVKRLQERK-------HICGMTGDGVNDA-PALKKADIGIAVA 611 (847)
Q Consensus 562 ~~~v~ar~sP~-qK~~iV~~lq~~g-------~~V~miGDG~ND~-~aLk~AdVGIamg 611 (847)
.-.-+.|+.|. =|..++..++..+ ..+.++|||.||. |.++...--+||-
T Consensus 151 ~~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 151 TQHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred CCCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 00123444332 3666666555432 2788999999994 7877776667774
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=88.60 E-value=1.6 Score=55.75 Aligned_cols=115 Identities=16% Similarity=0.187 Sum_probs=73.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
.+-||+.+.++.|+++|+++.++|+-....+...-++.|+.....+ ..+... -+.+..|+
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd-~iv~~~-------------------~~~~~KP~ 220 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFD-AIVSAD-------------------AFENLKPA 220 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCC-EEEECc-------------------ccccCCCC
Confidence 3578999999999999999999999988888888888888411111 011000 01122333
Q ss_pred hH--HHHHHHHhhcCCEEEEEcCCcCChhhhhhcCc-ceecccc---cHHHhhccCEEEcC
Q 003103 573 HK--YEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADA---TDAARSASDIVLTE 627 (847)
Q Consensus 573 qK--~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIamg~g---~~~a~~aaDivl~~ 627 (847)
.. ....+.+.-....+.|+||..+|+.|-++|++ -|++..+ .+.....+|+++.+
T Consensus 221 Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~ 281 (1057)
T PLN02919 221 PDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKD 281 (1057)
T ss_pred HHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 22 22233333334568999999999999999998 3334322 23344577888833
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=88.09 E-value=1.3 Score=48.55 Aligned_cols=91 Identities=11% Similarity=0.065 Sum_probs=66.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH----cCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR----LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~----~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 568 (847)
++.+++.++++.|++.|+.+.++|.-+...|..+-++ +|+.... .+.+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f----------------------------~~~~ 82 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF----------------------------DARS 82 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe----------------------------eEEE
Confidence 4578999999999999999999999999999888877 6653210 0112
Q ss_pred eChhhHHHHHHHH-hhc---CCEEEEEcCCcCChhhhhhcCcceecc
Q 003103 569 VFPEHKYEIVKRL-QER---KHICGMTGDGVNDAPALKKADIGIAVA 611 (847)
Q Consensus 569 ~sP~qK~~iV~~l-q~~---g~~V~miGDG~ND~~aLk~AdVGIamg 611 (847)
..++-|...++.+ ++. -..+.|+||...|..+.+++...+.+-
T Consensus 83 ~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 83 INWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred EecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 2244455544443 322 367899999999999999998887553
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=88.00 E-value=11 Score=41.86 Aligned_cols=61 Identities=21% Similarity=0.216 Sum_probs=42.1
Q ss_pred hHHHHHHHHhhc-------CCEEEEEcCCcCChhhhhhc-----CcceecccccHHHhhccCEEEcCCChhhHHHHH
Q 003103 573 HKYEIVKRLQER-------KHICGMTGDGVNDAPALKKA-----DIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 573 qK~~iV~~lq~~-------g~~V~miGDG~ND~~aLk~A-----dVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i 637 (847)
+|-..|+.+.+. +..+.++||...|-.|++.. ++||.+|.... ...|++.| ++-+.+...+
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k--~T~A~y~L--~dp~eV~~fL 355 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK--DTDASYSL--QDPSEVMDFL 355 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC--CCcceEeC--CCHHHHHHHH
Confidence 888888877653 33688999999999999865 46666774221 24678887 4555665544
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=86.14 E-value=1.4 Score=44.45 Aligned_cols=93 Identities=13% Similarity=0.144 Sum_probs=53.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+++++|++.+ +.+++|.-+..+....-+.+|+.... +. .. + ..+.++..+.
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f-~~-~f--------------~-----~i~~~~~~~~ 131 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALF-PG-AF--------------S-----EVLMCGHDES 131 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhC-CC-cc--------------c-----EEEEeccCcc
Confidence 46889999999999875 56667764444333344555553110 00 00 0 0011221111
Q ss_pred hHHHHH-HHHhhcC-CEEEEEcCCcCChhhhhhc--Ccce
Q 003103 573 HKYEIV-KRLQERK-HICGMTGDGVNDAPALKKA--DIGI 608 (847)
Q Consensus 573 qK~~iV-~~lq~~g-~~V~miGDG~ND~~aLk~A--dVGI 608 (847)
|.+++ ..+++.| ..+.|+||..+|+.|-++| ++-.
T Consensus 132 -kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 132 -KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred -cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 22333 3334344 4577999999999999999 8853
|
2 hypothetical protein; Provisional |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=84.54 E-value=1 Score=44.81 Aligned_cols=92 Identities=12% Similarity=0.075 Sum_probs=58.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE---e
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG---V 569 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar---~ 569 (847)
++.+++.+++++|+ .++.++|+-+...+....++.|+.... + ..+... .+-.+ .
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f-d-~i~~~~------------------~~~~~~~~~ 140 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF-D-GIFCFD------------------TANPDYLLP 140 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh-C-eEEEee------------------cccCccCCC
Confidence 36789999999997 479999998888888888888884311 0 000000 00001 1
Q ss_pred ChhhH--HHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc
Q 003103 570 FPEHK--YEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (847)
Q Consensus 570 sP~qK--~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG 607 (847)
.|+.. ..+.+.+......+.|+||...|+.+=++|++-
T Consensus 141 KP~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 141 KPSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred CCCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCE
Confidence 33221 233333433446688999999999988888764
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=83.68 E-value=2.1 Score=43.15 Aligned_cols=95 Identities=11% Similarity=0.026 Sum_probs=54.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH-HHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG-RRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA-~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
++.|++.++++.|++.|+++.++|.-+.......- +..++.... + ..+... -+....|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~f-d-~v~~s~-------------------~~~~~KP 142 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAA-D-HIYLSQ-------------------DLGMRKP 142 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhc-C-EEEEec-------------------ccCCCCC
Confidence 46899999999999999999999987655433221 112321100 0 000000 0001123
Q ss_pred hhH--HHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcce
Q 003103 572 EHK--YEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (847)
Q Consensus 572 ~qK--~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGI 608 (847)
+-. ....+.+.-....+.|+||...|+.+-++|++-.
T Consensus 143 ~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 143 EARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred CHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 211 1222333323356889999999999999888843
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=83.26 E-value=2.2 Score=46.59 Aligned_cols=48 Identities=19% Similarity=0.256 Sum_probs=38.9
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHcCCC
Q 003103 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMG 533 (847)
Q Consensus 486 G~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA---~~~Gi~ 533 (847)
|.+.-.+.+=|++.++|+.|++.|++++++|+....+...++ +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 555556677799999999999999999999999977666666 456763
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=81.42 E-value=1.1 Score=40.01 Aligned_cols=48 Identities=21% Similarity=0.278 Sum_probs=35.7
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHcCCC
Q 003103 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMG 533 (847)
Q Consensus 486 G~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA---~~~Gi~ 533 (847)
|.+.-.+.+=|++.++|+.|+++|++++.+|.....+...++ +++|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 555567788899999999999999999999998755544444 556774
|
... |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 847 | ||||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 0.0 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 1e-115 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 4e-39 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 2e-38 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 1e-37 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 8e-37 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 6e-24 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 6e-24 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 6e-24 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 7e-24 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 2e-19 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 3e-19 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 4e-11 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 1e-05 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 4e-08 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 4e-08 | ||
| 2kij_A | 124 | Solution Structure Of The Actuator Domain Of The Co | 5e-06 | ||
| 2hc8_A | 113 | Structure Of The A. Fulgidus Copa A-Domain Length = | 1e-05 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 2e-04 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 3e-04 |
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|2KIJ|A Chain A, Solution Structure Of The Actuator Domain Of The Copper- Transporting Atpase Atp7a Length = 124 | Back alignment and structure |
|
| >pdb|2HC8|A Chain A, Structure Of The A. Fulgidus Copa A-Domain Length = 113 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 847 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 0.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 0.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-140 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-140 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 1e-129 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-45 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-44 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 3e-30 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 2e-29 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 4e-29 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 4e-25 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 7e-18 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 2e-16 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 2e-15 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 7e-15 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-07 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 3e-06 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 1e-05 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 1e-05 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 1e-05 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 2e-05 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 2e-05 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 3e-05 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 3e-05 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 3e-05 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 6e-05 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 1e-04 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 2e-04 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 3e-04 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 3e-04 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 5e-04 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 1142 bits (2956), Expect = 0.0
Identities = 696/826 (84%), Positives = 747/826 (90%), Gaps = 5/826 (0%)
Query: 8 SLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFL 67
SLE+IKNE+VDLE+IPIEEVF+QLKCSREGLT+ EG R+ +FGPNKLEEKKESK+LKFL
Sbjct: 3 SLEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFL 62
Query: 68 GFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAA 127
GFMWNPLSWVME AAIMAIALANG GR PDWQDFVGII LLVINSTISFIEENNAGNAAA
Sbjct: 63 GFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAA 122
Query: 128 ALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALT 187
ALMA LAPKTKVLRDG+WSEQ+A+ILVPGD++SIKLGDI+PADARLLEGDPLK+DQSALT
Sbjct: 123 ALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALT 182
Query: 188 GESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 247
GESLPVTK+P EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA
Sbjct: 183 GESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 242
Query: 248 IGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 307
IGNFCICSIA+G+V EII+MYP+Q RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH
Sbjct: 243 IGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 302
Query: 308 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLA 367
RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NL+EVF KGVEK+ V+L A
Sbjct: 303 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFA 362
Query: 368 ARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRAS 427
A ASR ENQDAIDAA+VGMLADPKEARAG+REVHFLPFNPVDKRTALTYID GNWHR S
Sbjct: 363 AMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVS 422
Query: 428 KGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487
KGAPEQIL L D+ KKV ++IDK+AERGLRSL VARQ +PEKTKESPGAPW+ VGL
Sbjct: 423 KGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGL 482
Query: 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDK 547
LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLG K
Sbjct: 483 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHK 542
Query: 548 DASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607
DA++A++PV+ELIEKADGFAGVFPEHKYEIVK+LQERKHI GMTGDGVNDAPALKKADIG
Sbjct: 543 DANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIG 602
Query: 608 IAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 667
IAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV GFML
Sbjct: 603 IAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFML 662
Query: 668 IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAI 727
IALIW+FDFS FMVLIIAILNDGTIMTISKDRVKPSP PDSWKLKEIFATGVVLG Y AI
Sbjct: 663 IALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQAI 722
Query: 728 MTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIER 787
MTV+FFW KTDFFSD FGVRS+R E+M A+YLQVSIISQALIFVTRSRSWSF+ER
Sbjct: 723 MTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRSRSWSFVER 782
Query: 788 PGLLLATAFVIAQLVRVHFHLTNLNTTIHMGSSFVSVHDFSWYLFI 833
PG LL AF+IAQL+ + + + W I
Sbjct: 783 PGALLMIAFLIAQLIATLIAVYANWEFAK-----IRGIGWGWAGVI 823
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 1040 bits (2691), Expect = 0.0
Identities = 297/845 (35%), Positives = 460/845 (54%), Gaps = 42/845 (4%)
Query: 4 DKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKV 63
D + EE + + R+ E++ + +R GLTS+E R +G N+++E+KE+
Sbjct: 56 DGHDAEEEEEEATPGGGRVVPEDMLQ--TDTRVGLTSEEVVQRRRKYGLNQMKEEKENHF 113
Query: 64 LKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAG 123
LKFLGF P+ +VME AA++A L DW DF I LL++N+ + F++E AG
Sbjct: 114 LKFLGFFVGPIQFVMEGAAVLAAGL-------EDWVDFGVICGLLLLNAVVGFVQEFQAG 166
Query: 124 NAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDP-LKID 182
+ L LA K VLRDG E +A +VPGD++ ++ G I+PAD R++ D L++D
Sbjct: 167 SIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVD 226
Query: 183 QSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHF 241
QSALTGESL V K+ D+VF+ S K+GE V+ ATG +TF G+AA LV++ GHF
Sbjct: 227 QSALTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHF 286
Query: 242 QKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVT 301
+VL IG + + ++ + + + ++ L + I G+P+ +P V++ T
Sbjct: 287 TEVLNGIGTILLILVIFTLLIVWVSSF-YRSNPIVQILEFTLAITIIGVPVGLPAVVTTT 345
Query: 302 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKE 361
MA+G+ L+++ AI ++++AIE +AG+++LCSDKTGTLT NKL++ GV+ E
Sbjct: 346 MAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYT---VAGVDPE 402
Query: 362 HVILLAARASRTENQ--DAIDAAIVGMLADPKEARAGVRE---VHFLPFNPVDKRTALTY 416
++L A A+ + + DAID A + L A++ + + + F PF+PV K+
Sbjct: 403 DLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVV 462
Query: 417 IDSDGNWHRASKGAPEQILALCN----CREDVRKKVHAVIDKFAERGLRSLGVARQEIPE 472
G KGAP +L E+V + + +FA RG RSLGVAR+
Sbjct: 463 ESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG-- 520
Query: 473 KTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 532
W+++G++P DPPRHD+ +T+ A LG+++KM+TGD + I +ET R+LG+
Sbjct: 521 ------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGL 574
Query: 533 GTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTG 592
GTN+Y + L + V + +E ADGFA VFP+HKY +V+ LQ+R ++ MTG
Sbjct: 575 GTNIYNAERLGLGGGGD-MPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTG 633
Query: 593 DGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 652
DGVNDAP+LKKAD GIAV ++DAARSA+DIV PGL II A+ TSR IF RM Y +
Sbjct: 634 DGVNDAPSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVV 693
Query: 653 YAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLK 712
Y ++++I + + L I + +V+ IAI D + I+ D S P W L
Sbjct: 694 YRIALSIHLEIFLGLWIAILNRSLNIELVVFIAIFADVATLAIAYDNAPYSQTPVKWNLP 753
Query: 713 EIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQA 772
+++ V+LG LA+ T + M + M L+LQ+S+
Sbjct: 754 KLWGMSVLLGVVLAVGTWITVTTMYAQ------GENGGIVQNFGNMDEVLFLQISLTENW 807
Query: 773 LIFVTRSRSWSFIERPGLLLATAFVIAQLVRVHFHLTNLNTTIHMGSS---FVSVHDFSW 829
LIF+TR+ + P L+ A + ++ F + + + F
Sbjct: 808 LIFITRANGPFWSSIPSWQLSGAIFLVDILATCFTIWGWFEHSDTSIVAVVRIWIFSFGI 867
Query: 830 YLFIE 834
+ +
Sbjct: 868 FCIMG 872
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 442 bits (1138), Expect = e-140
Identities = 212/979 (21%), Positives = 362/979 (36%), Gaps = 186/979 (18%)
Query: 2 GGDKAISLEEIKNE-SVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEE-K 58
GG + LE +K E ++ ++ + E+ ++ + S +GL++ A L GPN L +
Sbjct: 35 GGKRKEKLENMKKEMEINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPR 94
Query: 59 KESKVLKFLGFMWNPLSWVMEAAAIMAIALA---NGGGRDPDWQDFVGIIVLL---VINS 112
+ +KF + L +M AA + + G + + L+ V+
Sbjct: 95 GTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTG 154
Query: 113 TISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADAR 172
+ +E + N A+ + + V+RDG + +A LV GD++ +K GD VPAD R
Sbjct: 155 CFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIR 214
Query: 173 LLEGDPLKIDQSALTGESLPVTK-------NPYDE---VFSGSTCKQGEIEAVVIATGVH 222
+L+ K+D S+LTGES P T+ +P + F + C +G + +V+ TG
Sbjct: 215 ILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDR 274
Query: 223 TFFGKAAHLVDSTN--------QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRK 274
T G+ A L ++ HF ++ +A+ A I+
Sbjct: 275 TIIGRIASLASGVENEKTPIAIEIEHFVDIIAG--------LAILFGATFFIVAMCIGYT 326
Query: 275 YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 334
+ + + +++ +P + ++V +++ + RL+ + + K + A+E + V+CSD
Sbjct: 327 FLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSD 386
Query: 335 KTGTLTLNKLTV-----DRNLIEVFAKGVEKEHVI--------------LLAARASRTEN 375
KTGTLT N++TV D ++ + L RA+
Sbjct: 387 KTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSG 446
Query: 376 QDAIDAAIVGMLADPKEA------------RAGVRE----VHFLPFNPVDKR--TALTYI 417
QDA+ ++ D E G RE V +PFN +K + T
Sbjct: 447 QDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLE 506
Query: 418 DSDGNWHRA-SKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVA 466
D H KGAPE++L C+ E R+ G R LG
Sbjct: 507 DPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFC 566
Query: 467 RQEIPEKTKESPGAPWQ-----------LVGLLPLFDPPRHDSAETIRRALNLGVNVKMI 515
+ + EK A GL+ + DPPR + + + G+ V M+
Sbjct: 567 QLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMV 626
Query: 516 TGDQ----LAIGKETG--------RRLGMGTNMYPSSSLLGQDKDAS------IAALPVD 557
TGD AI G P + +D A + +
Sbjct: 627 TGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPS 686
Query: 558 ELIEKADG-----FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD 612
EL+E FA P+ K IV+ Q I +TGDGVND+PALKKADIG+A+
Sbjct: 687 ELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGI 746
Query: 613 A-TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY--------AVSITIRIVL 663
A +DAA++A+D++L + + I++ V R IF +K Y I I +
Sbjct: 747 AGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITV 806
Query: 664 GFMLIALIWKFDFSPFMVLIIAILNDGT-------------IMTISKDRVKPSPQPDSWK 710
L +L I + D IM + R + +
Sbjct: 807 SVPLP-------LGCITILFIELCTDIFPSVSLAYEKAESDIMH-LRPRNPKRDRLVNEP 858
Query: 711 L--KEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSL----------------- 751
L F G + A T F + ++ F G+R
Sbjct: 859 LAAYSYFQIGAIQS--FAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEW 916
Query: 752 ----RTRPDEMMAALYLQVSIISQ-ALIFVTRSRSWSFIERP-------------GLLLA 793
R ++ + Q A + + ++R S ++ + +
Sbjct: 917 TFGQRLYQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIG 976
Query: 794 TAFVIAQLVRVHFHLTNLN 812
+ F+ +
Sbjct: 977 CFLCYCPGMPNIFNFMPIR 995
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 441 bits (1136), Expect = e-140
Identities = 203/980 (20%), Positives = 363/980 (37%), Gaps = 191/980 (19%)
Query: 3 GDKAISLEEIKNE-SVDLERIPIEEVFEQLKCSRE-GLTSDEGAHRLHVFGPNKLEE-KK 59
DK L+E+K E S+D ++ ++E+ + GLT+ L GPN L
Sbjct: 31 IDKKRDLDELKKEVSMDDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPT 90
Query: 60 ESKVLKFLGFMWNPLSWVMEAAAIMAIAL------ANGGGRDPDWQDFVGIIVLLVINST 113
+ +KF ++ S ++ AI+ + + V + ++++
Sbjct: 91 TPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGC 150
Query: 114 ISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARL 173
S+ +E + + + + V+RDG S +A +V GD++ +K GD +PAD R+
Sbjct: 151 FSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRI 210
Query: 174 LEGDPLKIDQSALTGESLPVTK-------NPYDE---VFSGSTCKQGEIEAVVIATGVHT 223
+ K+D S+LTGES P T+ NP + F + C +G VV+ TG T
Sbjct: 211 ISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRT 270
Query: 224 FFGKAAHLVDSTN--------QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKY 275
G+ A L ++ HF ++T +AV + I+ + +
Sbjct: 271 VMGRIATLASGLEVGRTPIAIEIEHFIHIITG--------VAVFLGVSFFILSLILGYSW 322
Query: 276 RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 335
+ + L+ +++ +P + ++V + + + R++++ + K + A+E + +CSDK
Sbjct: 323 LEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDK 382
Query: 336 TGTLTLNKLTV-----DRNLIEVFAKGVEKE--------------HVILLAARASRTENQ 376
TGTLT N++TV D + E + + L RA Q
Sbjct: 383 TGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQ 442
Query: 377 ------------DAIDAAIVGM----LADPKEARAGVREVHFLPFNPVDKR--TALTYID 418
DA ++A++ + R ++ +PFN +K +
Sbjct: 443 DNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEK 502
Query: 419 SDGNWHRA-SKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVAR 467
S + + KGAPE+IL C+ +ED+++ + G R LG
Sbjct: 503 SSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCH 562
Query: 468 QEIPEKT--------KESPGAPWQ---LVGLLPLFDPPRHDSAETIRRALNLGVNVKMIT 516
+PE + P P VGL+ + DPPR + + + + G+ V M+T
Sbjct: 563 FALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVT 622
Query: 517 GDQ----LAIGKETG--------RRLGMGTNMYPSSSLLGQDKDAS------IAALPVDE 558
GD AI K G P + +D A + L +
Sbjct: 623 GDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEV 682
Query: 559 LIEKADG-----FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADA 613
L + FA P+ K IV+ Q + I +TGDGVND+PALKKADIG+A+ +
Sbjct: 683 LDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIS 742
Query: 614 -TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY--------AVSITIRIVLG 664
+D ++ A+D++L + + I++ V R IF +K Y + I+
Sbjct: 743 GSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGN 802
Query: 665 FMLIALIWKFDFSPFMVLIIAILNDGT-------------IMTISKDRVKPSPQPDSWKL 711
L +L I + D IM + P + KL
Sbjct: 803 VPLP-------LGTVTILCIDLGTDMVPAISLAYEQAESDIMK------RQPRNPKTDKL 849
Query: 712 KEIFATGVVLGSYLAIMTV----VFFWLMRK--------------------TDFFSDAFG 747
+ G I + +F ++ + +D
Sbjct: 850 VNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQ 909
Query: 748 VRSLRTRPDEMMAA--LYLQVSIISQ-ALIFVTRSRSWSFIERP------------GLLL 792
+ R + ++ Q A + + ++R S ++ L
Sbjct: 910 QWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETAL 969
Query: 793 ATAFVIAQLVRVHFHLTNLN 812
A V + L
Sbjct: 970 AAFLSYCPGTDVALRMYPLK 989
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 411 bits (1059), Expect = e-129
Identities = 217/868 (25%), Positives = 346/868 (39%), Gaps = 177/868 (20%)
Query: 23 PIEEVFEQLKCSRE-GLTSDEGAHRLHVFGPNKL-EEKKESKVLKFLGFMWNPLSWVMEA 80
EE S GLT D+ L +G N+L E+ +S + + L ++
Sbjct: 9 STEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLL 68
Query: 81 AAIMAIALA---NGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKT 137
AA ++ LA G + + I+++L+ N+ + +E NA NA AL
Sbjct: 69 AACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMG 128
Query: 138 KVLRDGRWSEQ--DASILVPGDVISIKLGDIVPADARLL--EGDPLKIDQSALTGESLPV 193
KV R R S Q A +VPGD++ + +GD VPAD R+L + L++DQS LTGES+ V
Sbjct: 129 KVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSV 188
Query: 194 TKNP---YDE----------VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN---- 236
K+ D +FSG+ G+ +V TGV T GK + +T
Sbjct: 189 IKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATEQDKT 248
Query: 237 ----QVGHFQKVLT-AIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIG--- 288
++ F + L+ I C+ + I PV + G + +
Sbjct: 249 PLQQKLDEFGEQLSKVISLICVAVWLINI---GHFNDPVHGGSWIRGAIYYFKIAVALAV 305
Query: 289 -GIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD 347
IP +P V++ +A+G+ R++++ AI + + ++E + V+CSDKTGTLT N+++V
Sbjct: 306 AAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVC 365
Query: 348 R--------------NLIEVFAKGVEKEHVILLAARASRTENQDAIDA-AIVGMLA---- 388
+ N + E +L + R+ D + A + L
Sbjct: 366 KMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSS 425
Query: 389 --------------DPKEA-------RAGVREVHF------------------------- 402
+ E + V
Sbjct: 426 LDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFT 485
Query: 403 LPFNPVDKRTALTYIDSDGNWHRAS-----KGAPEQILALCNC----------REDVRKK 447
L F+ K ++ + + KGAPE ++ CN V++K
Sbjct: 486 LEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEK 545
Query: 448 VHAVIDKF--AERGLRSLGVARQEIPEKTKESPGAPWQ----------LVGLLPLFDPPR 495
+ +VI ++ LR L +A ++ P K +E VG++ + DPPR
Sbjct: 546 ILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPR 605
Query: 496 HDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYPSSSLLGQDKDASI 551
+ +I+ + G+ V MITGD +AI + G + + G++
Sbjct: 606 KEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIG--IFGENEEVADRAYTGRE----F 659
Query: 552 AALPVDELIEKADG---FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608
LP+ E E FA V P HK +IV+ LQ I MTGDGVNDAPALKKA+IGI
Sbjct: 660 DDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGI 719
Query: 609 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY--------AVSITIR 660
A+ T A++AS++VL + S I++AV RAI+ MK + Y V I +
Sbjct: 720 AMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLT 779
Query: 661 IVLGFMLIALIWKFDFSPFMVLIIAILNDGT-------------IMTISKDRVKPSPQPD 707
LG P +L + ++ DG IM P +
Sbjct: 780 AALGLPEA-------LIPVQLLWVNLVTDGLPATALGFNPPDLDIM-----DRPPRSPKE 827
Query: 708 SWKLKEIFATGVVLGSYLAIMTV-VFFW 734
+F + +G Y+ TV W
Sbjct: 828 PLISGWLFFRYMAIGGYVGAATVGAAAW 855
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 173 bits (442), Expect = 2e-45
Identities = 133/549 (24%), Positives = 221/549 (40%), Gaps = 119/549 (21%)
Query: 121 NAGNAAAALMANLAPKT-KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPL 179
G A L+ L KT V+RDG+ + GD++ ++ G+ +P D ++EG+
Sbjct: 197 RTGEAIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY 255
Query: 180 KIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFF------------GK 227
+D+S ++GE +PV K+ DEVF + G ++ G T K
Sbjct: 256 -VDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSK 314
Query: 228 A--AHLVDSTNQV-GHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLV 284
L D +V +F + + +I+ I I P+ L+
Sbjct: 315 PPIQRLAD---KVVAYFIPTVLLV------AISAFIYWYFIAHAPLLF-----AFTTLIA 360
Query: 285 LLIGGIPIAM----PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 340
+L+ P A PT ++T+ +G + ++ G + K A+E + + DKTGTLT
Sbjct: 361 VLVVACPCAFGLATPT--ALTVGMG--KGAELGILIKNADALEVAEKVTAVIFDKTGTLT 416
Query: 341 LNKLTVDRNLIEVFAKGVEKEHVILLAARA-SRTENQDAIDAAIVGMLADPKEARAGVRE 399
K V ++ ++ ++ LAA A R+E+ A AIV K+A
Sbjct: 417 KGKPEV----TDLVPLNGDERELLRLAAIAERRSEHPIA--EAIV------KKALE---- 460
Query: 400 VHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR------EDVRKKVHAVID 453
H + +K + G +G + + N R V +V ++
Sbjct: 461 -HGIELGEPEKVEVIA-----G------EGVVADGILVGNKRLMEDFGVAVSNEVELALE 508
Query: 454 KFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVK 513
K ++ VAR ++ G++ + D + + ++ +G+ V
Sbjct: 509 KLEREAKTAVIVARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVG 555
Query: 514 MITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573
MITGD + R L +D +I A V P
Sbjct: 556 MITGDNWRSAEAISRELN------------------------LDLVI------AEVLPHQ 585
Query: 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 633
K E VK+LQ K + GDG+NDAPAL +AD+GIAV +D A + DIVL L +
Sbjct: 586 KSEEVKKLQA-KEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDV 644
Query: 634 ISAVLTSRA 642
++A+ SR
Sbjct: 645 VAAIQLSRK 653
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 170 bits (433), Expect = 1e-44
Identities = 134/555 (24%), Positives = 224/555 (40%), Gaps = 119/555 (21%)
Query: 121 NAGNAAAALMANLAPKT-KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPL 179
G A L+ L KT V+RDG+ + GD++ ++ G+ +P D ++EG+
Sbjct: 119 RTGEAIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES- 176
Query: 180 KIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFF------------GK 227
+D+S ++GE +PV K+ DEVF + G ++ G T K
Sbjct: 177 YVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSK 236
Query: 228 A--AHLVDSTNQV-GHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLV 284
L D +V +F + T + +I+ I I P+ L+
Sbjct: 237 PPIQRLAD---KVVAYF--IPTVLL----VAISAFIYWYFIAHAPLLF-----AFTTLIA 282
Query: 285 LLIGGIPIAM----PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 340
+L+ P A PT ++T+ +G + ++ G + K A+E + + DKTGTLT
Sbjct: 283 VLVVACPCAFGLATPT--ALTVGMG--KGAELGILIKNADALEVAEKVTAVIFDKTGTLT 338
Query: 341 LNKLTVDRNLIEVFAKGVEKEHVILLAARA-SRTENQDAIDAAIVGMLADPKEARAGVRE 399
K V ++ ++ ++ LAA A R+E+ A AIV K+A
Sbjct: 339 KGKPEV----TDLVPLNGDERELLRLAAIAERRSEHPIA--EAIV------KKALE---- 382
Query: 400 VHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR------EDVRKKVHAVID 453
H + +K + +G + + N R V +V ++
Sbjct: 383 -HGIELGEPEKVEVIA-----------GEGVVADGILVGNKRLMEDFGVAVSNEVELALE 430
Query: 454 KFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVK 513
K ++ VAR ++ G++ + D + + ++ +G+ V
Sbjct: 431 KLEREAKTAVIVARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVG 477
Query: 514 MITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573
MITGD + R L +D +I A V P
Sbjct: 478 MITGDNWRSAEAISRELN------------------------LDLVI------AEVLPHQ 507
Query: 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 633
K E VK+LQ K + GDG+NDAPAL +AD+GIAV +D A + DIVL L +
Sbjct: 508 KSEEVKKLQA-KEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDV 566
Query: 634 ISAVLTSRAIFQRMK 648
++A+ SR ++K
Sbjct: 567 VAAIQLSRKTMSKIK 581
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 119 bits (302), Expect = 3e-30
Identities = 76/335 (22%), Positives = 130/335 (38%), Gaps = 71/335 (21%)
Query: 317 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVI-LLAARASRTEN 375
+ A E + + DKTGTLT + V ++ ++ ++ + A+ +R+E+
Sbjct: 2 RDRQAFERAKDLQAVIFDKTGTLTEGRFGV----TDIVGFNHSEDELLQIAASLEARSEH 57
Query: 376 QDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQIL 435
A AAIV +EA V++ A+ G +
Sbjct: 58 PIA--AAIV------EEAEK-----RGFGLTEVEEFRAIP-----GKGVEGIVN--GRRY 97
Query: 436 ALCNCR--EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDP 493
+ + ++ K ++K ++G + + + ++ G++ L D
Sbjct: 98 MVVSPGYIRELGIKTDESVEKLKQQGKTVVFILKNG-------------EVSGVIALADR 144
Query: 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAA 553
R +S E I + +G+ M+TGD + K LG
Sbjct: 145 IRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELG---------------------- 182
Query: 554 LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADA 613
+D+ A V P K E VK +Q++ M GDGVNDAPAL +AD+GIA+
Sbjct: 183 --LDDYF------AEVLPHEKAEKVKEVQQKYVT-AMVGDGVNDAPALAQADVGIAIGAG 233
Query: 614 TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 648
TD A +DIVL + + V SR + +
Sbjct: 234 TDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFH 268
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 2e-29
Identities = 33/166 (19%), Positives = 72/166 (43%), Gaps = 30/166 (18%)
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 542
+ + + D PR + + + + N G+ + +++GD+ KE + L
Sbjct: 126 EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELN----------- 174
Query: 543 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 602
+ E + + PE K I+++L++ + M GDGVNDA AL
Sbjct: 175 -------------IQEYY------SNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALA 215
Query: 603 KADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 648
AD+ +A+ + D +++ +DI+L + ++ + + + +
Sbjct: 216 LADVSVAMGNGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIP 261
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 4e-29
Identities = 87/349 (24%), Positives = 139/349 (39%), Gaps = 87/349 (24%)
Query: 311 QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARA 370
+ G + K A+E + + DKTGTLT K V ++ ++ ++ LAA A
Sbjct: 15 ELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEV----TDLVPLNGDERELLRLAAIA 70
Query: 371 -SRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 429
R+E+ A AIV K+A H + +K + G +G
Sbjct: 71 ERRSEHPIA--EAIV------KKALE-----HGIELGEPEKVEVIA-----G------EG 106
Query: 430 APEQILALCNCR------EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQ 483
+ + N R V +V ++K ++ VAR +
Sbjct: 107 VVADGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNG-------------R 153
Query: 484 LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYPS 539
+ G++ + D + + ++ +G+ V MITGD AI +E
Sbjct: 154 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN------------ 201
Query: 540 SSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAP 599
+D +I A V P K E VK+LQ K + GDG+NDAP
Sbjct: 202 ----------------LDLVI------AEVLPHQKSEEVKKLQA-KEVVAFVGDGINDAP 238
Query: 600 ALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 648
AL +AD+GIAV +D A + DIVL L +++A+ SR ++K
Sbjct: 239 ALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 4e-25
Identities = 51/167 (30%), Positives = 72/167 (43%), Gaps = 33/167 (19%)
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 542
+ V LL + DP + + ETI G+ + M+TGD + LG
Sbjct: 544 KTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLG----------- 592
Query: 543 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 602
+ +++ A + PE K IV L+++ I M GDGVNDAPAL
Sbjct: 593 -------------IKKVV------AEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALA 633
Query: 603 KADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKN 649
KADIGIA+ TD A ++ + L L I A S + M N
Sbjct: 634 KADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSEST---MSN 677
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 87.6 bits (218), Expect = 7e-18
Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 26/258 (10%)
Query: 123 GNAAAALMANLAPKT--KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
G+A AL+ L P++ ++ DG E + GD++ ++ G+ +P D + EG
Sbjct: 213 GSAIRALL-KLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSF- 270
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD----STN 236
+D+S +TGE +PV K +V + + G + G T + +V S
Sbjct: 271 VDESMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRA 330
Query: 237 QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMP- 295
+ ++ F I V +++ I+ G+ + +LI IA P
Sbjct: 331 PIQRLADTVSGW--FVPAVILVAVLSFIVWALLGPQPALSYGLIAAVSVLI----IACPC 384
Query: 296 -----TVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNL 350
T +S+ + +G + +Q G + K A+E M ++ L DKTGTLT +
Sbjct: 385 ALGLATPMSIMVGVG--KGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKL---- 438
Query: 351 IEVFAKGVEKEHVILLAA 368
+ +++ + LAA
Sbjct: 439 TRIVTDDFVEDNALALAA 456
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 75.2 bits (186), Expect = 2e-16
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 125 AAAALMANLAPKT-KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQ 183
A L+ L KT V+RDG+ + GD++ ++ G+ +P D ++EG+ +D+
Sbjct: 2 AIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY-VDE 59
Query: 184 SALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGV 221
S ++GE +PV K+ DEVF + G + + AT V
Sbjct: 60 SMISGEPVPVLKSKGDEVFGATINNTGVL--KIRATRV 95
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 73.8 bits (182), Expect = 2e-15
Identities = 29/159 (18%), Positives = 64/159 (40%), Gaps = 17/159 (10%)
Query: 355 AKGVEKEHVILLAARASRTENQ--DAIDAAIV--GMLADPKEARAGVREVHFLPFNPVDK 410
G E V+ A S + + +D A++ + + +++ +PF+ +
Sbjct: 10 ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERR 69
Query: 411 RTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGL 460
R ++ ++ + KGA ++IL +C+ + + +K+ V D +GL
Sbjct: 70 RMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGL 129
Query: 461 RSLGVARQEIPEKTKE-SPGAPWQLV--GLLPLFDPPRH 496
R + VA + +P + + L+ G + D H
Sbjct: 130 RVVAVATKYLPAREGDYQRADESDLILEGYIAFLDHHHH 168
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 71.0 bits (175), Expect = 7e-15
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 121 NAGNAAAALMANLAPKT-KVLRDGRWSEQDASILVP------GDVISIKLGDIVPADARL 173
A A L+ +L ++ + + V GD+I + G P D R+
Sbjct: 4 TMSEALAKLI-SLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRV 62
Query: 174 LEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGV 221
+EG +D+S +TGE++PV K P V +GS + G + ++ AT V
Sbjct: 63 IEGHS-MVDESLITGEAMPVAKKPGSTVIAGSINQNGSL--LICATHV 107
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.9 bits (144), Expect = 3e-09
Identities = 80/511 (15%), Positives = 143/511 (27%), Gaps = 142/511 (27%)
Query: 445 RKKVHAVIDKFA--------ERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRH 496
+ + D F + +S+ ++++EI + G L LF
Sbjct: 19 KDILSVFEDAFVDNFDCKDVQDMPKSI-LSKEEIDHIIMS----KDAVSGTLRLFWTLLS 73
Query: 497 DSAETIRRALN--LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAAL 554
E +++ + L +N K + I E R+ M T MY
Sbjct: 74 KQEEMVQKFVEEVLRINYKFLMS---PIKTEQ-RQPSMMTRMYIEQ-------------- 115
Query: 555 PVDELIEKADGFAGVF---PEHKYEIVKRLQERKH-----ICGMTGDG--------VNDA 598
D L FA + ++ + L E + I G+ G G
Sbjct: 116 -RDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSY 174
Query: 599 PALKKADIGI---AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 655
K D I + + S ++ L I TSR+ N +
Sbjct: 175 KVQCKMDFKIFWLNLKN----CNSPETVLEMLQKLLYQIDPNWTSRS--DHSSNIKLRIH 228
Query: 656 SITIRIVLGFM-------LIAL-------IWK-FDFS-PFMVL-----IIAILNDGTIMT 694
SI + L+ L W F+ S ++ + L+ T
Sbjct: 229 SIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTH 288
Query: 695 ISKDRVKPSPQPDSWKLKEIFA--TG---------VVLGSYLAIMTVVF----------F 733
IS D + PD ++K + V+ + + +
Sbjct: 289 ISLDHHSMTLTPD--EVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDN 346
Query: 734 WLMRKTDFFSDAFGVRSLRT-RPDEMMAALYLQVSI------ISQALI------------ 774
W D + SL P E ++ ++S+ I L+
Sbjct: 347 WKHVNCDKLTTIIES-SLNVLEPAE-YRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDV 404
Query: 775 --FVTRSRSWSFIER---------PGLLLATAFVIAQLVRVHFHLT---NLNTTIHMGSS 820
V + +S +E+ P + L + +H + N+ T
Sbjct: 405 MVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDL 464
Query: 821 FVSVHDFSWYLFI----ETSSLSEMMHLFQK 847
D +Y I + E M LF+
Sbjct: 465 IPPYLDQYFYSHIGHHLKNIEHPERMTLFRM 495
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.5 bits (130), Expect = 1e-07
Identities = 104/708 (14%), Positives = 202/708 (28%), Gaps = 226/708 (31%)
Query: 24 IEEVFEQ-----LKCS------REGLTSDEGAHRLHVFGPNK----------LEEKKESK 62
I VFE C + L+ +E H + + L K+E
Sbjct: 21 ILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMS--KDAVSGTLRLFWTLLSKQEEM 78
Query: 63 VLKFLGFMWNP-LSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENN 121
V KF+ + ++M I R P T +IE+
Sbjct: 79 VQKFVEEVLRINYKFLMS-----PIKTEQ---RQPS-------------MMTRMYIEQ-- 115
Query: 122 AGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDV--------ISIKLGDIVPADARL 173
RD ++ D + +V + L ++ PA L
Sbjct: 116 -------------------RDRLYN--DNQVFAKYNVSRLQPYLKLRQALLELRPAKNVL 154
Query: 174 LEGDPLKIDQSALTGESL---PVTKNPYDEVF--SGSTCKQGEIEAVVIATGVHTFFGKA 228
++G L ++ + + V ++F + C E ++ ++
Sbjct: 155 IDGV-LGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNW 213
Query: 229 AHLVD-STNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLI 287
D S+N + + ++ + Y + LLVLL
Sbjct: 214 TSRSDHSSNIKLRIHSIQAELRRL------------------LKSKPYENC---LLVLL- 251
Query: 288 GGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNK---- 343
+ + + L +T R + D L + T ++L+
Sbjct: 252 ---NVQNAKAWNA-FNLSCKIL-----LTTRFKQV-----TDFLSAATTTHISLDHHSMT 297
Query: 344 LTVDRNLIEVFAKGVEKE--------------HVILLAAR----ASRTEN-----QDAID 380
LT D + K ++ + ++A + +N D +
Sbjct: 298 LTPDEVK-SLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLT 356
Query: 381 AAIVGMLA--DPKEARAGVREVHFLPFN--PVDKRTALTYIDSDGNWHRASKGAPEQILA 436
I L +P E R F + P +I P +L+
Sbjct: 357 TIIESSLNVLEPAEYRK-----MFDRLSVFPPS-----AHI-------------PTILLS 393
Query: 437 L--CNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPP 494
L + + V V++K + L V +Q P+++ S + +
Sbjct: 394 LIWFDVIKSD---VMVVVNKLHKYSL----VEKQ--PKESTIS------IPSIYLELKVK 438
Query: 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAA- 553
+ R + D I K + S L+ D +
Sbjct: 439 LENEYALHRSIV-----------DHYNIPKT-----------FDSDDLIPPYLDQYFYSH 476
Query: 554 ----LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609
L E E+ F VF + ++ + ++++ +G +N LK I
Sbjct: 477 IGHHLKNIEHPERMTLFRMVFLDFRF-LEQKIRHDSTAWNASGSILNTLQQLKFYKPYIC 535
Query: 610 VADATDAARSASDIV--LTEPGLSVIIS--AVLTSRAIFQRMKNYTIY 653
D R + I+ L + ++I S L A+ ++ I+
Sbjct: 536 DNDPKY-ERLVNAILDFLPKIEENLICSKYTDLLRIALMA--EDEAIF 580
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} Length = 168 | Back alignment and structure |
|---|
Score = 47.1 bits (113), Expect = 3e-06
Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Query: 572 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
K V ++ + G+ V+D LK+ + ADA A+ A +
Sbjct: 82 SDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICKC 141
Query: 628 PG 629
G
Sbjct: 142 SG 143
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} Length = 176 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 1e-05
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Query: 572 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
+ K +K+ E + I G+ VND P +AVA A D R A+ V T
Sbjct: 85 DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTV 144
Query: 628 PG 629
PG
Sbjct: 145 PG 146
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* Length = 188 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 1e-05
Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 572 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
+K L E+ I GD + D P ++K + +AVADA +D V
Sbjct: 100 SNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRI 159
Query: 628 PG 629
G
Sbjct: 160 AG 161
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* Length = 164 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 1e-05
Identities = 18/62 (29%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Query: 572 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
K + L I GD +NDA LK+ I A A R S I L +
Sbjct: 78 VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEK 137
Query: 628 PG 629
G
Sbjct: 138 RG 139
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} Length = 162 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 2e-05
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 572 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
K EI ++++E+ + G GD V D +KK +AV +A + R + +
Sbjct: 83 YKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQR 142
Query: 628 PG 629
G
Sbjct: 143 NG 144
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} Length = 191 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 2e-05
Identities = 12/62 (19%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 572 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
K + L++ + GD + D P +++ +G+AV++A +D
Sbjct: 93 VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTER 152
Query: 628 PG 629
G
Sbjct: 153 TG 154
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* Length = 180 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 3e-05
Identities = 28/128 (21%), Positives = 46/128 (35%), Gaps = 28/128 (21%)
Query: 502 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIE 561
I+ ++ + V +++G I + LG+ + +K A +L++
Sbjct: 44 IKMLMDADIQVAVLSGRDSPILRRRIADLGI-KLFFLGKL----EK---ETAC--FDLMK 93
Query: 562 KADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSAS 621
+ AGV E GD D PA AVADA ++A
Sbjct: 94 Q----AGVTAEQ--------------TAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAV 135
Query: 622 DIVLTEPG 629
D VL+ G
Sbjct: 136 DHVLSTHG 143
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} Length = 211 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 3e-05
Identities = 13/62 (20%), Positives = 19/62 (30%), Gaps = 4/62 (6%)
Query: 572 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
K L GD + D P + + + +AVADA + V
Sbjct: 123 SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRI 182
Query: 628 PG 629
G
Sbjct: 183 KG 184
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A Length = 189 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 3e-05
Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 28/128 (21%)
Query: 502 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIE 561
I+ + GV +I+G + AI + + LG+ +++ DK + L D+L+
Sbjct: 55 IKMLIASGVTTAIISGRKTAIVERRAKSLGI-EHLFQGRE----DK---LVVL--DKLLA 104
Query: 562 KADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSAS 621
+ + E GD + D P +++ +G+AVA+A R +
Sbjct: 105 E----LQLGYEQ--------------VAYLGDDLPDLPVIRRVGLGMAVANAASFVREHA 146
Query: 622 DIVLTEPG 629
+ G
Sbjct: 147 HGITRAQG 154
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} Length = 195 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 6e-05
Identities = 22/132 (16%), Positives = 46/132 (34%), Gaps = 36/132 (27%)
Query: 502 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIE 561
++ +N G+ + +ITG + + R+ AL + +
Sbjct: 61 VKALMNAGIEIAIITGRR---SQIVENRM---------------------KALGISLI-- 94
Query: 562 KADGFAGVFPEHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAA 617
+ G + K + + ++ I G GD + D P ++K + + VAD
Sbjct: 95 ----YQGQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLL 148
Query: 618 RSASDIVLTEPG 629
++ V G
Sbjct: 149 AQRANYVTHIKG 160
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 1e-04
Identities = 31/196 (15%), Positives = 54/196 (27%), Gaps = 25/196 (12%)
Query: 415 TYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSL-GVARQEIPEK 473
T +D + AP + +AL ++ V K ++ + L ++EI
Sbjct: 16 TITMNDNIINIMKTFAPPEWMAL---KDGVLSKTLSIKEGVGRM-FGLLPSSLKEEITSF 71
Query: 474 TKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533
E R E + + +I+G +
Sbjct: 72 VLEDA--------------KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEK 117
Query: 534 TNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGD 593
+Y + + D G K ++ L E M GD
Sbjct: 118 DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCC------KPSVIHELSEPNQYIIMIGD 171
Query: 594 GVNDAPALKKADIGIA 609
V D A K +D+ A
Sbjct: 172 SVTDVEAAKLSDLCFA 187
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 569 VFPEHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
+F K E++ LQ +I + GDG ND K A I IA +A + + +
Sbjct: 138 MFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHC 196
Query: 625 LTEPGLSVII 634
+ EP L++I
Sbjct: 197 INEPDLALIK 206
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 3e-04
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Query: 569 VFPEHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
+ K EI++++ + + I GDG ND KKA + IA A + +DI
Sbjct: 139 LKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADIC 197
Query: 625 LTEPGLSVII 634
+ + L I+
Sbjct: 198 IEKRDLREIL 207
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 569 VFPEHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
V + K +I+ L ++ + GDG ND + A +G+A A + +
Sbjct: 241 VSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTA 299
Query: 625 LTEPGLSVII 634
+ GL ++
Sbjct: 300 VRFAGLGGVV 309
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 5e-04
Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 569 VFPEHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
+ +K + + L R +I GDG ND P L+ A GIA A R
Sbjct: 242 MNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQ 300
Query: 625 LTEPGLSVII 634
+ G +++
Sbjct: 301 INYHGFELLL 310
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 847 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.96 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.95 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.95 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.95 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.93 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.88 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.78 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.41 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.26 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.19 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.15 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.14 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.11 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.1 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.09 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.06 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.92 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.92 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.89 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.83 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.79 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.73 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.71 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.69 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.66 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.65 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.65 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.6 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.59 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.56 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.55 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.54 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.54 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.53 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.51 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.5 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.44 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.44 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.41 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.4 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.32 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.28 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.23 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.21 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.18 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.17 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.14 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.09 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.08 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.08 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.0 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.99 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 97.99 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 97.99 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 97.99 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 97.98 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 97.98 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 97.97 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 97.96 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.95 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 97.92 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.92 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 97.91 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 97.9 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.89 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 97.89 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 97.88 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.88 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.87 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.87 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.87 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.86 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.85 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.82 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 97.82 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.8 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.76 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.72 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.66 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 97.63 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 97.63 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.62 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.61 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 97.58 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 97.56 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.56 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.56 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.54 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.53 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 97.52 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.52 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.5 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.5 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.49 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.48 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.47 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.46 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.46 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.46 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.43 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.36 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.36 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 97.32 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.29 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.28 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 96.87 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 96.78 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 96.73 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.72 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 96.67 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.66 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.64 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 96.52 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.44 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.39 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 96.28 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.28 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 96.27 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.24 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 96.21 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.1 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 96.0 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 95.94 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 95.84 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 95.75 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 95.71 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 95.6 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 95.57 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 94.91 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 94.48 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 94.45 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 94.05 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 93.73 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 93.5 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 93.35 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 93.3 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 93.22 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 90.42 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 89.97 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 89.26 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 88.06 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 85.24 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 83.37 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 81.24 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 80.16 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-140 Score=1273.67 Aligned_cols=836 Identities=83% Similarity=1.240 Sum_probs=717.3
Q ss_pred chhhhcccCcccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccccchHHHHHHHHHhHHHHHHHHHHHHHHH
Q 003103 8 SLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIA 87 (847)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~ 87 (847)
++++.+++..++|+++.+|++++|+++.+|||++|+++|+++||+|+++.++++.|+.|+++|++|++++|+++++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~il~~aaiis~~ 82 (885)
T 3b8c_A 3 SLEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEMAAIMAIA 82 (885)
T ss_dssp ---------CCCSSSSTTCCTTTSSSCSSCSTHHHHHHHSSSCCSCCTTTTCCCTTSSTTSCCCGGGSSHHHHHHHGGGG
T ss_pred chhhhhhcchhhHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36777788889999999999999999989999999999999999999999888889999999999999999999999998
Q ss_pred HhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCee
Q 003103 88 LANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIV 167 (847)
Q Consensus 88 ~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~v 167 (847)
++...+.+.+|.+++.|+++++++..++++||+|+++++++|+++.+++++|+|||++++|+++||+|||+|.|++||+|
T Consensus 83 l~~~~~~~~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~I 162 (885)
T 3b8c_A 83 LANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDII 162 (885)
T ss_dssp SSCCTTSCSCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCC
T ss_pred HHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEE
Confidence 76544455689999999889999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEeeCceEEEeccccCCCceeecCCCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhccCCCCchHHHHHH
Q 003103 168 PADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 247 (847)
Q Consensus 168 PaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~ 247 (847)
||||+|++|+++.||||+|||||.|+.|.+||.+|+||.+.+|.++++|++||.+|++|++++++++..+++++|+.+++
T Consensus 163 PaDg~ll~g~~l~VdES~LTGES~Pv~K~~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~lq~~~~~ 242 (885)
T 3b8c_A 163 PADARLLEGDPLKVDQSALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 242 (885)
T ss_dssp SSCCCCCCSSCBCCCCCSTTCCSSCCCBSSCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCSCSCCSTTTTTTHH
T ss_pred eeceEEEEcCcccccccccCCCCcceEecCCCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhcccccChHHHHHHH
Confidence 99999999987899999999999999999999999999999999999999999999999999998877778899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceeccchhhhhcCC
Q 003103 248 IGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAG 327 (847)
Q Consensus 248 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~ 327 (847)
++.+++..+++++++.+++.|...+.+|.+++..++++++++|||+||++++++++.++.||+|+|+++|+++++|+||+
T Consensus 243 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilvk~~~aiE~Lg~ 322 (885)
T 3b8c_A 243 IGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAG 322 (885)
T ss_dssp HHHHHHHHHHHHHHHHSTTTTTTTCSCSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCCSSGGGHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCeEeCCchHHHHHhC
Confidence 98775544433333333334444456788899999999999999999999999999999999999999999999999999
Q ss_pred eEEEEecCCCccccCceEEEEEeeeecccCCChHHHHHHHHHhccccCcchHHHHHHHhcCChHHHhccceEEEeecCCC
Q 003103 328 MDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNP 407 (847)
Q Consensus 328 v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~s 407 (847)
+|+||||||||||+|+|+|.+.....+..+.++++++.+++.|+...++||++.|+++++.++.+.+..++.++.+||+|
T Consensus 323 v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ll~~aa~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~pF~s 402 (885)
T 3b8c_A 323 MDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNP 402 (885)
T ss_dssp CCCCEEECCCCCSCCCCCCCSCCCCSSCSSTTHHHHHHHHHHHCCSSSCCSHHHHHHHTTCCTTCCCCSSCCBCCCCCCT
T ss_pred CCEEEECCCCCcccCceEEEEEEEeccCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHhhchhhHhhcCceeecccCCc
Confidence 99999999999999999997543222334567778888888888765679999999998876555556788889999999
Q ss_pred CCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEE
Q 003103 408 VDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487 (847)
Q Consensus 408 ~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~ 487 (847)
.+|||++++++.+|+.++++|||||.++++|+.+++.++.+.+.+++++++|+|++++|++++++.+.+..|++++|+|+
T Consensus 403 ~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lGl 482 (885)
T 3b8c_A 403 VDKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGL 482 (885)
T ss_dssp TTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCEE
T ss_pred ccceEEEEEEecCCcEEEEEeCCHHHHHHhccCchhhHHHHHHHHHHHHhCCCeEEEEEEeccccccccccccCcEEEEE
Confidence 99999998877678888899999999999998655566678888999999999999999999887667778899999999
Q ss_pred ecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEE
Q 003103 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (847)
Q Consensus 488 i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 567 (847)
++++||+|||++++|++||++||+|+|+||||+.||.++|+++||..+..+...+.|.+.+..+++.++++++++.+|||
T Consensus 483 i~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~a 562 (885)
T 3b8c_A 483 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFA 562 (885)
T ss_dssp EEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEE
T ss_pred EEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEE
Confidence 99999999999999999999999999999999999999999999976555556666766655578889999999999999
Q ss_pred EeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHH
Q 003103 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRM 647 (847)
Q Consensus 568 r~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i 647 (847)
|++|+||.++|+.||++|+.|+|+|||+||+||||+||||||||+|+|+|+++||+|+.+++|++|++++++||++|+||
T Consensus 563 rv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni 642 (885)
T 3b8c_A 563 GVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRM 642 (885)
T ss_dssp CCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHH
T ss_pred EECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeCCccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHhhhhhcccccCCCCCCCCCCcccHHHHHHHHHHHHHHHHH
Q 003103 648 KNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAI 727 (847)
Q Consensus 648 ~~~i~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 727 (847)
++++.|++++|+..++.++...+++++|++|+|++|+|+++|+..+++++|+.+|+++|++|..++++..+++.|+++++
T Consensus 643 ~~~i~~~l~~n~~~~~~~~~~~~~~~~~l~p~~il~i~l~~d~~~l~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~ 722 (885)
T 3b8c_A 643 KNYTIYAVSITIRIVFGFMLIALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQAI 722 (885)
T ss_dssp HHHHHHHHHHTTTTTSTTHHHHSSCSSCSCHHHHHHHHHHHHTTTCCCCCCCCCCSSCCCSTTTTTTTTTHHHHHSSTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcCcCHHHHHHHHHHHHHHHHhhcccccCcccCCcchhHHHHHHHHHHHHHHHHH
Confidence 99999999999976665666666788899999999999999999899999999998889999888778888888999999
Q ss_pred HHHHHHHHHHhcccccccccccccCCChhHHHHHHHHHHHHHHHHHhhhhccCCCCccccchHHHHHHHHHHHHHHHHhh
Q 003103 728 MTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVRVHFH 807 (847)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 807 (847)
.++++|++....++++..++.....+...+.+|..|+..+++.++++|++|+++++++++|++++++++++..++.+++.
T Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~Rs~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 802 (885)
T 3b8c_A 723 MTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRSRSWSFVERPGALLMIAFLIAQLIATLIA 802 (885)
T ss_dssp HHTTSSSCTTTTTTTTCCCCSSCCGGGTHHHHTTTTTTTSSTTGGGTTCSSSCTTTSTTSTTTTTSGGGSSTTTTTTSSS
T ss_pred HHHHHHHHHHHcCccccccCcccccchHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccCccHHHHHHHHHHHHHHHHHH
Confidence 99877776554333332233211111124566776665555566689999999988888887777666655555555566
Q ss_pred hccccccccccccccChhhHHHHHHHHhh--hHHHHHHhh
Q 003103 808 LTNLNTTIHMGSSFVSVHDFSWYLFIETS--SLSEMMHLF 845 (847)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~~--~f~~~~~~~ 845 (847)
+|.. ..++++.++++.+|.++++.... .++|..|++
T Consensus 803 ~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~ 840 (885)
T 3b8c_A 803 VYAN--WEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFA 840 (885)
T ss_dssp SSCC--CCSSCCCCCTTTTHHHHHHHTGGGTHHHHHHHHH
T ss_pred Hhcc--ccccccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6652 23356889999988887766554 588998876
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-130 Score=1182.62 Aligned_cols=785 Identities=38% Similarity=0.606 Sum_probs=673.1
Q ss_pred HHHcCCC-CCCCCHHHHHHHHhhcCCCccCccccchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHH
Q 003103 28 FEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIV 106 (847)
Q Consensus 28 ~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~~~~~~~~~~~~i~~ 106 (847)
.+.|+++ .+|||++|+++|+++||+|+++.++++.|..|+++|++|++++++++++++++++ +|.+++++++
T Consensus 77 ~~~l~t~~~~GLs~~ea~~r~~~~G~N~l~~~~~~~~~~~l~~f~~~~~~ll~~aai~s~~~g-------~~~~~~~i~~ 149 (920)
T 1mhs_A 77 EDMLQTDTRVGLTSEEVVQRRRKYGLNQMKEEKENHFLKFLGFFVGPIQFVMEGAAVLAAGLE-------DWVDFGVICG 149 (920)
T ss_dssp STTTTTCCCCCCCSHHHHHHHHHTSSSSCCCCCCSSHHHHTHHHHHHHHHHHHHHHHHCTTCS-------CSSHHHHHHH
T ss_pred HHHhCCCcCCCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hHHHHHHHHH
Confidence 3557776 5799999999999999999999888899999999999999999999999988754 8889888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEeeCc-eEEEecc
Q 003103 107 LLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDP-LKIDQSA 185 (847)
Q Consensus 107 ~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~-~~Vdes~ 185 (847)
+++++++++++||+|+++++++|+++.+++++|+|||++++|+++||||||+|.|++||+|||||+|++|++ +.||||+
T Consensus 150 vv~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~l~VDES~ 229 (920)
T 1mhs_A 150 LLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSA 229 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESSCCEEBCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecCceeeeeccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999974 8999999
Q ss_pred ccCCCceeecCCCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhccC-CCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 003103 186 LTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEI 264 (847)
Q Consensus 186 LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 264 (847)
|||||.|+.|.+||.+|+||.+.+|.++++|++||.+|++|++++++++++ +++++++.+++++.+++.++++.+++.+
T Consensus 230 LTGES~PV~K~~gd~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~ 309 (920)
T 1mhs_A 230 LTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVW 309 (920)
T ss_dssp TSSCCCCEECCSSCEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcceEecCCCeeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998775 6789999999998876554444333222
Q ss_pred HhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceeccchhhhhcCCeEEEEecCCCccccCce
Q 003103 265 IIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL 344 (847)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m 344 (847)
+.+...+.++..++.+++++++++|||+||++++++++.++.||+|+|+++|+++++|+||++|+||||||||||+|+|
T Consensus 310 -~~~~~~~~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m 388 (920)
T 1mhs_A 310 -VSSFYRSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKL 388 (920)
T ss_dssp -HTTTTTTCCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCS
T ss_pred -HHHHhcCCcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCeEEecCchhhhhccCcEEEECCCCCccccce
Confidence 2233345678889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeeeecccCCChHHHHHHHHHhccccCc--chHHHHHHHhcCC---hHHHhccceEEEeecCCCCCcceEEEEEcC
Q 003103 345 TVDRNLIEVFAKGVEKEHVILLAARASRTENQ--DAIDAAIVGMLAD---PKEARAGVREVHFLPFNPVDKRTALTYIDS 419 (847)
Q Consensus 345 ~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~ai~~~~~~---~~~~~~~~~~~~~~pf~s~~k~~~v~~~~~ 419 (847)
+|.++.. ..+.++++++..++.|+..... ||++.|++.++.+ .......++.++++||+|.+|+|+++++..
T Consensus 389 ~v~~~~~---~~g~~~~~ll~~a~l~~~~~~~~~~P~e~Al~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~iv~~~ 465 (920)
T 1mhs_A 389 SLHDPYT---VAGVDPEDLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESP 465 (920)
T ss_dssp CCCCCBC---CSCCCCTHHHHHHHHSCCCSSCSCCSHHHHHHHHHHHSSSCCGGGSCCCEEEEEEEETTTTEEEEEECCS
T ss_pred eEEEEee---cCCCCHHHHHHHHHHhcCCcccCCChHHHHHHHHHHhcccchhhccccceeEEeeccCCCCeEEEEEEeC
Confidence 9988653 2344556666666666554444 9999999986521 112345678899999999999999998777
Q ss_pred CCcEEEEEcCcHHHHHHhcCC----ChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCCC
Q 003103 420 DGNWHRASKGAPEQILALCNC----REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPR 495 (847)
Q Consensus 420 ~g~~~~~~KGa~e~i~~~~~~----~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr 495 (847)
+|+.++++|||||.++++|+. +++.++.+.+.+++++++|+||+++|++.. |.+++|+|+++++||+|
T Consensus 466 ~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~--------e~~l~~lGli~i~Dp~R 537 (920)
T 1mhs_A 466 QGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG--------EGSWEILGIMPCMDPPR 537 (920)
T ss_dssp SSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSS--------SCSCCCCBBCCCCCCCC
T ss_pred CCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEecc--------ccccEEEEEEEEecccc
Confidence 788889999999999999975 345567788889999999999999999841 57889999999999999
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCC--cccCccccccCCcchHHHHHHhcCeEEEeChhh
Q 003103 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS--SLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (847)
Q Consensus 496 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~q 573 (847)
||++++|++||++||+|+|+||||+.||.++|+++||..+..+.. .+.|. ..++++++.+.+++..||||++|+|
T Consensus 538 ~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~---~~~~~~el~~~~~~~~V~arv~P~~ 614 (920)
T 1mhs_A 538 HDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGG---GDMPGSEVYDFVEAADGFAEVFPQH 614 (920)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC---CCGGGGGGGTTTTTTSCEESCCSTH
T ss_pred ccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCc---ccCCHHHHHHHHhhCeEEEEeCHHH
Confidence 999999999999999999999999999999999999965322211 22332 3567788888899999999999999
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHH
Q 003103 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 653 (847)
Q Consensus 574 K~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~ 653 (847)
|.++|+.||++|++|+|+|||+||+||||+||||||||+|+|+|+++||+|+++++|++|++++++||++|+||++++.|
T Consensus 615 K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~ 694 (920)
T 1mhs_A 615 KYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVY 694 (920)
T ss_dssp HHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEETTSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccccccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHhhhhhcccccCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHH
Q 003103 654 AVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMTVVFF 733 (847)
Q Consensus 654 ~~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 733 (847)
.++.|+.....+......++++++|.|++|+|+++|++++++++|+.++.++|++|+.++++..+++.|+++++.+++.|
T Consensus 695 ~l~~n~~~~~~~~~~~~~~~~~l~~~~il~~~l~~d~~~lal~~e~~~~~~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~ 774 (920)
T 1mhs_A 695 RIALSIHLEIFLGLWIAILNRSLNIELVVFIAIFADVATLAIAYDNAPYSQTPVKWNLPKLWGMSVLLGVVLAVGTWITV 774 (920)
T ss_dssp HHHHHHHHHHHHHHHHHSCSCCCCHHHHHHHHHHHTTHHHHCCCCCSGGGGSCCCCCSSSCSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHhhhhcccCcccccCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999876444444444567789999999999999998899999998877778888777777777788999988887776
Q ss_pred HHHHhcccccccccccccCCChhHHHHHHHHHHHHHHHHHhhhhccCCCCccccchHHHHHHHHHHHHHHHHhhhccccc
Q 003103 734 WLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVRVHFHLTNLNT 813 (847)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 813 (847)
++.+.. ....+. .....+.+|++|++++++|++++|++|+.+++|...++++++.++++.+++.+++++++
T Consensus 775 ~~~~~~---~~~~~~---~~~~~~~~T~~f~~lv~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 845 (920)
T 1mhs_A 775 TTMYAQ---GENGGI---VQNFGNMDEVLFLQISLTENWLIFITRANGPFWSSIPSWQLSGAIFLVDILATCFTIWG--- 845 (920)
T ss_dssp HHHTTT---TTTCCS---SSSSSSHHHHHHHHHHHHHHHHTTSSSCSSSCSCCSCTHHHHHHHHHHHHHHHHHHSSS---
T ss_pred HHHHHh---cccccc---cchhhHHHHHHHHHHHHHHHHHHHHhccchhhhcCchHHHHHHHHHHHHHHHHHHHHhh---
Confidence 654321 001110 01223578999999999999999999998876666678888888888877777666544
Q ss_pred cccccccccChhhHHHHHHHHhhh--HHHHHHhh
Q 003103 814 TIHMGSSFVSVHDFSWYLFIETSS--LSEMMHLF 845 (847)
Q Consensus 814 ~~~~~~~~~~~~~~~~~l~i~~~~--f~~~~~~~ 845 (847)
.|++.++++.+|.+++++.... +.|..|++
T Consensus 846 --~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~ 877 (920)
T 1mhs_A 846 --WFEHSDTSIVAVVRIWIFSFGIFCIMGGVYYI 877 (920)
T ss_dssp --STTSCSHHHHTHHHHHHHTTHHHHHHHHHHHC
T ss_pred --hhccCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5778899999998888766654 57777764
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-126 Score=1177.57 Aligned_cols=837 Identities=22% Similarity=0.337 Sum_probs=682.2
Q ss_pred cchhhhccc-CcccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHHHHhHHHHHHHHHHH
Q 003103 7 ISLEEIKNE-SVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAI 83 (847)
Q Consensus 7 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~i 83 (847)
+++++.|++ ..+||+++.+|++++|+++ .+|||++||++|+++||+|+++.++ .+.|+.|++||++|++++|+++++
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~ 119 (1034)
T 3ixz_A 40 EKLENMKKEMEINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAA 119 (1034)
T ss_pred hhHHHHhhhcCcchhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHH
Confidence 456677777 4689999999999999999 4799999999999999999998776 567899999999999999999999
Q ss_pred HHHHHhc---CC---CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCc
Q 003103 84 MAIALAN---GG---GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGD 157 (847)
Q Consensus 84 l~~~~~~---~~---~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GD 157 (847)
++++... .. ....+|+++++++++++++++++++||+|+++++++|+++.+++++|+|||++++|+++||||||
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GD 199 (1034)
T 3ixz_A 120 ICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGD 199 (1034)
T ss_pred HHHHHHHHhhccCCCccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCc
Confidence 9887531 11 11235778888899999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCeeccceEEEeeCceEEEeccccCCCceeecCCC----------CccccceeeeeceEEEEEEeccchhHhhh
Q 003103 158 VISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY----------DEVFSGSTCKQGEIEAVVIATGVHTFFGK 227 (847)
Q Consensus 158 iV~l~~G~~vPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~----------~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~ 227 (847)
+|.|++||+|||||+|++|+++.||||+|||||.|+.|.++ |++|+||.+.+|+++++|++||.+|++|+
T Consensus 200 iV~l~~Gd~VPAD~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~Gk 279 (1034)
T 3ixz_A 200 LVEMKGGDRVPADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGR 279 (1034)
T ss_pred EEEEcCCceecCCeEEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhH
Confidence 99999999999999999998899999999999999999775 56899999999999999999999999999
Q ss_pred HHHhhhccC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHH
Q 003103 228 AAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 306 (847)
Q Consensus 228 i~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~ 306 (847)
|+++++..+ +++++++.++++..++..++++..++ +++.+...+.+|..++..++++++++|||+||++++++++.++
T Consensus 280 I~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~ 358 (1034)
T 3ixz_A 280 IASLASGVENEKTPIAIEIEHFVDIIAGLAILFGAT-FFIVAMCIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTA 358 (1034)
T ss_pred HHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcchHHHHHHHHHHHHHheeccccHHHHHHHHHHHH
Confidence 999988764 77899999999988755443332222 2223334567888999999999999999999999999999999
Q ss_pred HHhhcCCceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccC-----------C--C---hHHHHHHHHHh
Q 003103 307 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG-----------V--E---KEHVILLAARA 370 (847)
Q Consensus 307 ~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~-----------~--~---~~~~l~~~~~~ 370 (847)
+||+++|++||+++++|+||++++||||||||||+|+|+|.+++....... . . ...++..++.|
T Consensus 359 ~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc 438 (1034)
T 3ixz_A 359 KRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLC 438 (1034)
T ss_pred HHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999998765211000 0 0 12345555555
Q ss_pred ccc---------------cCcchHHHHHHHhcC----ChHHHhccceEEEeecCCCCCcceEEEEEcC---CCcEEEEEc
Q 003103 371 SRT---------------ENQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYIDS---DGNWHRASK 428 (847)
Q Consensus 371 ~~~---------------~~~~~~~~ai~~~~~----~~~~~~~~~~~~~~~pf~s~~k~~~v~~~~~---~g~~~~~~K 428 (847)
+.. ..++|.+.|++.+.. +....+..++.++.+||+|.+|+|++++... ++++.+++|
T Consensus 439 ~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~K 518 (1034)
T 3ixz_A 439 NRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMK 518 (1034)
T ss_pred ccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEe
Confidence 321 124788999887653 3444567788999999999999998887643 367899999
Q ss_pred CcHHHHHHhcCC----------ChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCC-----------CCCCCCCceEEEE
Q 003103 429 GAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT-----------KESPGAPWQLVGL 487 (847)
Q Consensus 429 Ga~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~-----------~~~~e~~l~~lG~ 487 (847)
||||.++++|+. +++.++.+.+.+++++++|+||+++|++.+++.+ .+..|++|+|+|+
T Consensus 519 GApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lGl 598 (1034)
T 3ixz_A 519 GAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGL 598 (1034)
T ss_pred CChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhhccccCcEEEEE
Confidence 999999999963 3456778899999999999999999999876432 1235789999999
Q ss_pred ecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCC----------------------CCcccCc
Q 003103 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP----------------------SSSLLGQ 545 (847)
Q Consensus 488 i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~----------------------~~~~~~~ 545 (847)
++++||+|++++++|++|+++||+|+|+|||++.||.++|+++||..+... ...+.|.
T Consensus 599 v~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~ 678 (1034)
T 3ixz_A 599 VSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGM 678 (1034)
T ss_pred EeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecH
Confidence 999999999999999999999999999999999999999999999642110 0011111
Q ss_pred cccccCCcchHHHHHHhcC--eEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecc-cccHHHhhccC
Q 003103 546 DKDASIAALPVDELIEKAD--GFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASD 622 (847)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~--v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg-~g~~~a~~aaD 622 (847)
....++++++.+.+.+.. +|||++|+||.++|+.+|+.|++|+|+|||.||+||||+||+||||| +|+|+||++||
T Consensus 679 -~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD 757 (1034)
T 3ixz_A 679 -QLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAAD 757 (1034)
T ss_pred -hhhhCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcC
Confidence 122455666777776654 99999999999999999999999999999999999999999999999 99999999999
Q ss_pred EEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhcCCccHHHHHHHHHHhhhh-hcccccCCC
Q 003103 623 IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA-LIWKFDFSPFMVLIIAILNDGT-IMTISKDRV 700 (847)
Q Consensus 623 ivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~-~~~l~~~~~ 700 (847)
+|+.++++++|+.++++||++|+|++|++.|.+++|+..++..+++. +.++.|++|+|++|+|+++|++ ++++++|++
T Consensus 758 ~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~palal~~e~~ 837 (1034)
T 3ixz_A 758 MILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKA 837 (1034)
T ss_pred EEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999999999999999998776655544 4567899999999999999975 899999998
Q ss_pred CCC---CCCCc-----ccHHHHHHHHH-HHHHHHHHHHHHHHHHHHh-ccccccc-cccc---------ccCC-------
Q 003103 701 KPS---PQPDS-----WKLKEIFATGV-VLGSYLAIMTVVFFWLMRK-TDFFSDA-FGVR---------SLRT------- 753 (847)
Q Consensus 701 ~~~---~~~~~-----~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~-~~~~~~~-~~~~---------~~~~------- 753 (847)
++. ++|++ ...++++...+ ..|+++++.+++.|++.+. .++.+.. +++. +..+
T Consensus 838 ~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (1034)
T 3ixz_A 838 ESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWT 917 (1034)
T ss_pred ChhhhhCCCCCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccc
Confidence 753 22222 22344555543 4588888888877766543 2222110 1110 0000
Q ss_pred ------ChhHHHHHHHHHHHHHHHHHhhhhccCCCCccc---cchHHHHHHHHHHHHHHHHhhhccccccccccccccCh
Q 003103 754 ------RPDEMMAALYLQVSIISQALIFVTRSRSWSFIE---RPGLLLATAFVIAQLVRVHFHLTNLNTTIHMGSSFVSV 824 (847)
Q Consensus 754 ------~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (847)
....++|++|.+++++|++++|++|+++.+.++ ..|++++++++++.++ +++..|.++....|++.++++
T Consensus 918 ~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~s~~~~~~~~N~~l~~~~~~~~~l-~~~~~~~p~~~~~f~~~~l~~ 996 (1034)
T 3ixz_A 918 FGQRLYQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCI-GCFLCYCPGMPNIFNFMPIRF 996 (1034)
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCCcccccCCcccHHHHHHHHHHHHH-HHHHHHhhhHHHHhcCCCCCH
Confidence 012378999999999999999999997754433 2466888887776665 444556666667899999999
Q ss_pred hhHHHHHHHHhhh--HHHHHHhhc
Q 003103 825 HDFSWYLFIETSS--LSEMMHLFQ 846 (847)
Q Consensus 825 ~~~~~~l~i~~~~--f~~~~~~~~ 846 (847)
.+|.+++++.... ++|.+|++.
T Consensus 997 ~~w~~~~~~~~~~~~~~e~~K~~~ 1020 (1034)
T 3ixz_A 997 QWWLVPMPFGLLIFVYDEIRKLGV 1020 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888766654 899999874
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-125 Score=1170.76 Aligned_cols=827 Identities=21% Similarity=0.342 Sum_probs=674.9
Q ss_pred CcccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHhc---
Q 003103 16 SVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALAN--- 90 (847)
Q Consensus 16 ~~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~--- 90 (847)
..+||.++.++++++|+++ .+|||++|+++|+++||+|+++.++ ++.|+.|++||++|++++|+++++++++++.
T Consensus 45 ~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~ 124 (1028)
T 2zxe_A 45 SMDDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQA 124 (1028)
T ss_dssp CCCCSSSCHHHHHHHHTCCSSSCBCHHHHHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHHH
T ss_pred CcchhhCCHHHHHHHhCcCccCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhc
Confidence 3579999999999999998 6899999999999999999999875 6788999999999999999999999987642
Q ss_pred --CC-CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCee
Q 003103 91 --GG-GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIV 167 (847)
Q Consensus 91 --~~-~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~v 167 (847)
+. ....+|+++++++++++++++++++||+|+++++++|+++.+++++|+|||++++|+++||||||+|.|++||+|
T Consensus 125 ~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~I 204 (1028)
T 2zxe_A 125 ATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRI 204 (1028)
T ss_dssp HSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCBC
T ss_pred ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHCCcCCEEEECCCCEe
Confidence 10 112357788888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEeeCceEEEeccccCCCceeecCCCC----------ccccceeeeeceEEEEEEeccchhHhhhHHHhhhccC-
Q 003103 168 PADARLLEGDPLKIDQSALTGESLPVTKNPYD----------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN- 236 (847)
Q Consensus 168 PaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~----------~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~- 236 (847)
||||+|++|+++.||||+|||||.|+.|.+++ ++|+||.+.+|.++++|++||.+|.+|+|++++.+++
T Consensus 205 PaD~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~ 284 (1028)
T 2zxe_A 205 PADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEV 284 (1028)
T ss_dssp CSEEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHHSCC
T ss_pred eceEEEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHHHhccCCCC
Confidence 99999999977999999999999999999875 5999999999999999999999999999999998764
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCcee
Q 003103 237 QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 316 (847)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilv 316 (847)
+++++++.+++++.++..+.++..++.+++ +.+.+.+|..++.+++++++++|||+||++++++++.++.||+++|++|
T Consensus 285 ~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilv 363 (1028)
T 2zxe_A 285 GRTPIAIEIEHFIHIITGVAVFLGVSFFIL-SLILGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLV 363 (1028)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHTTCCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEE
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHccCcHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHhhCCcee
Confidence 789999999999887655444333322222 2234567888899999999999999999999999999999999999999
Q ss_pred ccchhhhhcCCeEEEEecCCCccccCceEEEEEeeee--cc-cC----------CCh---HHHHHHHHHhccc-------
Q 003103 317 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEV--FA-KG----------VEK---EHVILLAARASRT------- 373 (847)
Q Consensus 317 k~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~--~~-~~----------~~~---~~~l~~~~~~~~~------- 373 (847)
|+++++|+||++|+||||||||||+|+|+|.++.... +. .+ ... +.++..++.|+..
T Consensus 364 k~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~ 443 (1028)
T 2zxe_A 364 KNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQD 443 (1028)
T ss_dssp SSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHSCCCEECTTCT
T ss_pred ccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHHHHHhcCCCeeecCCC
Confidence 9999999999999999999999999999999876421 00 00 011 2456666666421
Q ss_pred --------cCcchHHHHHHHhcC----ChHHHhccceEEEeecCCCCCcceEEEEEcC---CCcEEEEEcCcHHHHHHhc
Q 003103 374 --------ENQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYIDS---DGNWHRASKGAPEQILALC 438 (847)
Q Consensus 374 --------~~~~~~~~ai~~~~~----~~~~~~~~~~~~~~~pf~s~~k~~~v~~~~~---~g~~~~~~KGa~e~i~~~~ 438 (847)
..+||.|.|++.++. +....+..++.++++||+|.+|||+++++.. +|++++++|||||.++++|
T Consensus 444 ~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c 523 (1028)
T 2zxe_A 444 NVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRC 523 (1028)
T ss_dssp TSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTE
T ss_pred CCccccceeCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHh
Confidence 124888999988763 3334456788999999999999999999863 5778999999999999999
Q ss_pred CC----------ChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCC-----------CCCCCCCceEEEEecccCCCCcc
Q 003103 439 NC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT-----------KESPGAPWQLVGLLPLFDPPRHD 497 (847)
Q Consensus 439 ~~----------~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~-----------~~~~e~~l~~lG~i~~~D~lr~~ 497 (847)
.. +++.++.+.+.+++++++|+||+++|++++++.+ .+..|.+++|+|+++++||+|||
T Consensus 524 ~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~i~Dplr~~ 603 (1028)
T 2zxe_A 524 STILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAA 603 (1028)
T ss_dssp EEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEEEEECCBCTT
T ss_pred hhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhhhhcCeEEEeeeccCCCCChh
Confidence 63 3456778888999999999999999999886532 12347899999999999999999
Q ss_pred hHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCC----------------------CCcccCccccccCCcch
Q 003103 498 SAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP----------------------SSSLLGQDKDASIAALP 555 (847)
Q Consensus 498 ~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~----------------------~~~~~~~~~~~~~~~~~ 555 (847)
++++|++|+++||+++|+|||++.||.++|+++||..+... ...+.|. ....+++++
T Consensus 604 ~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~-~l~~~~~~~ 682 (1028)
T 2zxe_A 604 VPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGS-DLKDLSTEV 682 (1028)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHH-HHTTCCHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcH-HhhhCCHHH
Confidence 99999999999999999999999999999999999742110 0011111 112355677
Q ss_pred HHHHHHhcC--eEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecc-cccHHHhhccCEEEcCCChhh
Q 003103 556 VDELIEKAD--GFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSV 632 (847)
Q Consensus 556 ~~~~~~~~~--v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg-~g~~~a~~aaDivl~~~~~~~ 632 (847)
+++++.++. +|||++|+||.++|+.+|+.|++|+|+|||+||+||||+|||||||| +|+|+|+++||+|+.+++|++
T Consensus 683 l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~ 762 (1028)
T 2zxe_A 683 LDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFAS 762 (1028)
T ss_dssp HHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETTCCTHH
T ss_pred HHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEecCCCHHH
Confidence 888888776 99999999999999999999999999999999999999999999999 799999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhcCCccHHHHHHHHHHhhhh-hcccccCCCCCC---CCCC
Q 003103 633 IISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA-LIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQPD 707 (847)
Q Consensus 633 i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~-~~~l~~~~~~~~---~~~~ 707 (847)
|++++++||++|+|+++++.|.+++|+..++.++... +..+.|++|+|++|+|+++|++ ++++++|++++. ++|+
T Consensus 763 I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~d~~pa~al~~e~~~~~~m~~~Pr 842 (1028)
T 2zxe_A 763 IVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPR 842 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTTTHHHHHHGGGCCCSSCGGGSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHHhccCccchhhhccCCC
Confidence 9999999999999999999999999997766655544 4467899999999999999975 789999987653 2222
Q ss_pred c-----ccHHHHHHH-HHHHHHHHHHHHHHHHHHHHhc-ccccc--------ccc--cccc----CC---------ChhH
Q 003103 708 S-----WKLKEIFAT-GVVLGSYLAIMTVVFFWLMRKT-DFFSD--------AFG--VRSL----RT---------RPDE 757 (847)
Q Consensus 708 ~-----~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~-~~~~~--------~~~--~~~~----~~---------~~~~ 757 (847)
+ ...++++.. ++..|+++++++|+.|++.+.. ++.+. ++. ..+. .. ...+
T Consensus 843 ~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (1028)
T 2zxe_A 843 NPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFT 922 (1028)
T ss_dssp CTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECHHHHHHHHHH
T ss_pred CcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccccccccccccccccchhhhhhhhhH
Confidence 2 223454444 4567999998888777664422 21100 000 0000 00 0125
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCCCCccc--cchHHHHHHHHHHHHHHHHhhhccccccccccccccChhhHHHHHHHHh
Q 003103 758 MMAALYLQVSIISQALIFVTRSRSWSFIE--RPGLLLATAFVIAQLVRVHFHLTNLNTTIHMGSSFVSVHDFSWYLFIET 835 (847)
Q Consensus 758 ~~t~~f~~~~~~~~~~~~~~rs~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 835 (847)
.+|++|++++++|+++++++|+++.++++ .+|+++++++++..++..++ .|.++....|++.++++.+|.+++.+..
T Consensus 923 ~~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~~~l~~~~w~~~~~~~~ 1001 (1028)
T 2zxe_A 923 CHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFL-SYCPGTDVALRMYPLKPSWWFCAFPYSL 1001 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSSSCHHHHCSCCHHHHHHHHHHHHHHHHH-HHSTTHHHHTCCCCCCGGGGGTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCcchhccCCcCHHHHHHHHHHHHHHHHH-HHhhhHHhhhcCCCCCHHHHHHHHHHHH
Confidence 78999999999999999999998754333 36678887877776664444 4444445668899999999987766554
Q ss_pred --hhHHHHHHhh
Q 003103 836 --SSLSEMMHLF 845 (847)
Q Consensus 836 --~~f~~~~~~~ 845 (847)
..++|..|++
T Consensus 1002 ~~~~~~e~~k~~ 1013 (1028)
T 2zxe_A 1002 IIFLYDEMRRFI 1013 (1028)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 4588988876
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-121 Score=1139.46 Aligned_cols=828 Identities=26% Similarity=0.350 Sum_probs=664.2
Q ss_pred cccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC--
Q 003103 17 VDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANGG-- 92 (847)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~~-- 92 (847)
.+||.++.+|++++|+++ .+|||++|+++|+++||+|+++.++ +++|+.|++||++|++++|+++++++++++...
T Consensus 3 ~~~~~~~~~~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~ 82 (995)
T 3ar4_A 3 EAAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEG 82 (995)
T ss_dssp TTGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCS
T ss_pred chhhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 468999999999999997 5799999999999999999999865 578889999999999999999999999876422
Q ss_pred -CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCe--EEEEeCCCCCCCcEEEEcCCCeecc
Q 003103 93 -GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGR--WSEQDASILVPGDVISIKLGDIVPA 169 (847)
Q Consensus 93 -~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~--~~~I~~~~Lv~GDiV~l~~G~~vPa 169 (847)
+....|.++++++++++++++++++||+|+++++++|+++.+++++|+|||+ .++|+++||+|||+|.|++||+|||
T Consensus 83 ~~~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPa 162 (995)
T 3ar4_A 83 EETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPA 162 (995)
T ss_dssp SGGGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCS
T ss_pred ccchhhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCcccc
Confidence 1123688888888999999999999999999999999999999999999987 6999999999999999999999999
Q ss_pred ceEEEe--eCceEEEeccccCCCceeecCCC-------------CccccceeeeeceEEEEEEeccchhHhhhHHHhhhc
Q 003103 170 DARLLE--GDPLKIDQSALTGESLPVTKNPY-------------DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS 234 (847)
Q Consensus 170 D~~ll~--g~~~~Vdes~LTGEs~pv~K~~~-------------~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~ 234 (847)
||+|++ ++++.||||+|||||.|+.|.++ |.+|+||.+.+|.++++|++||.+|++|+|++++++
T Consensus 163 D~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~ 242 (995)
T 3ar4_A 163 DIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAA 242 (995)
T ss_dssp EEEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHT
T ss_pred cEEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhhc
Confidence 999965 45689999999999999999987 689999999999999999999999999999999987
Q ss_pred cC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhh-c----cccchH----hHHHHHHHHHHHhhcCchhHHHHHHHHH
Q 003103 235 TN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYP-V----QHRKYR----DGIDNLLVLLIGGIPIAMPTVLSVTMAI 304 (847)
Q Consensus 235 ~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~----~~~~~~----~~~~~~~~ll~~~iP~~L~~~~~~~~~~ 304 (847)
++ +++++|+.+++++.++..++++.+++.+++.+. . .+.+|. ..+..++++++++|||+||++++++++.
T Consensus 243 ~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~ 322 (995)
T 3ar4_A 243 TEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLAL 322 (995)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHHHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHH
Confidence 64 789999999999887655444333332222221 1 112232 3456788899999999999999999999
Q ss_pred HHHHhhcCCceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeec--------------ccCCC-----------
Q 003103 305 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF--------------AKGVE----------- 359 (847)
Q Consensus 305 ~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~--------------~~~~~----------- 359 (847)
++.||+++|+++|+++++|+||++|+||||||||||+|+|+|.++..... ..+..
T Consensus 323 ~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 402 (995)
T 3ar4_A 323 GTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKP 402 (995)
T ss_dssp HHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEE
T ss_pred HHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCcccccccccc
Confidence 99999999999999999999999999999999999999999998764210 00000
Q ss_pred --------hHHHHHHHHHhcccc------------CcchHHHHHHHhcCCh-------H-------------HHhccceE
Q 003103 360 --------KEHVILLAARASRTE------------NQDAIDAAIVGMLADP-------K-------------EARAGVRE 399 (847)
Q Consensus 360 --------~~~~l~~~~~~~~~~------------~~~~~~~ai~~~~~~~-------~-------------~~~~~~~~ 399 (847)
...+...++.|+... .++|.|.|++.++.+. . ..+..+++
T Consensus 403 ~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 482 (995)
T 3ar4_A 403 IRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKK 482 (995)
T ss_dssp CCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHHHHEEE
T ss_pred ccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccchhhhhhhCce
Confidence 012333445543221 1589999987654210 0 12456889
Q ss_pred EEeecCCCCCcceEEEEEcCCC-----cEEEEEcCcHHHHHHhcCC----------ChHHHHHHHHHHHHH--HHccCeE
Q 003103 400 VHFLPFNPVDKRTALTYIDSDG-----NWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKF--AERGLRS 462 (847)
Q Consensus 400 ~~~~pf~s~~k~~~v~~~~~~g-----~~~~~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~--~~~G~rv 462 (847)
++.+||+|+||||+++++..+| +..+++|||||.|+++|+. +++.++.+.+.++++ +++|+||
T Consensus 483 ~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRv 562 (995)
T 3ar4_A 483 EFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRC 562 (995)
T ss_dssp EEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEE
T ss_pred EEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceE
Confidence 9999999999999999986655 5789999999999999963 345567788889999 9999999
Q ss_pred EEEEeeecCCCC----------CCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 003103 463 LGVARQEIPEKT----------KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 532 (847)
Q Consensus 463 l~~a~~~~~~~~----------~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi 532 (847)
+++|||+++..+ .+..|++++|+|+++++||+|||++++|+.||++||+++|+|||++.||.++|+++||
T Consensus 563 La~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi 642 (995)
T 3ar4_A 563 LALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGI 642 (995)
T ss_dssp EEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTS
T ss_pred EEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCc
Confidence 999999875422 1224789999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC--CCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceec
Q 003103 533 GTNMYP--SSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (847)
Q Consensus 533 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIam 610 (847)
...... ...+.|. ....++++++.+++.+..+|||++|+||.++|+.+|++|+.|+|+|||+||+||||+|||||||
T Consensus 643 ~~~~~~i~~~~~~g~-~~~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiam 721 (995)
T 3ar4_A 643 FGENEEVADRAYTGR-EFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM 721 (995)
T ss_dssp SCTTCCCTTTEEEHH-HHHTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEE
T ss_pred CCCCCcccceEEEch-hhhhCCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEe
Confidence 643111 1233332 2335667778888999999999999999999999999999999999999999999999999999
Q ss_pred ccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhcCCccHHHHHHHHHHhh
Q 003103 611 ADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA-LIWKFDFSPFMVLIIAILND 689 (847)
Q Consensus 611 g~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~ 689 (847)
|+|+++|+++||+++.+++|+++++++++||++|+||++++.|.+++|+..++.++++. +.++.|++|+|++|+|+++|
T Consensus 722 g~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~qil~~nl~~d 801 (995)
T 3ar4_A 722 GSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTD 801 (995)
T ss_dssp TTSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTTT
T ss_pred CCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997766555544 44567899999999999999
Q ss_pred h-hhcccccCCCCCC-----CC--CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccc-----cc-ccccc----
Q 003103 690 G-TIMTISKDRVKPS-----PQ--PDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRK--TDFF-----SD-AFGVR---- 749 (847)
Q Consensus 690 ~-~~~~l~~~~~~~~-----~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~-----~~-~~~~~---- 749 (847)
+ ++++++++++++. |+ +++...++.+..+++.|++++++++..|++... .+.. .. .++.+
T Consensus 802 ~~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 881 (995)
T 3ar4_A 802 GLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDH 881 (995)
T ss_dssp HHHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSCSSCC
T ss_pred HHHHHhhccCCCChhHHhCCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhcccccccccc
Confidence 6 4789999886543 21 122223455666677799998888765544321 0000 00 00000
Q ss_pred -ccC----C--ChhHHHHHHHHHHHHHHHHHhhhhccCCCCccc---cchHHHHHHHHHHHHHHHHhhhccccccccccc
Q 003103 750 -SLR----T--RPDEMMAALYLQVSIISQALIFVTRSRSWSFIE---RPGLLLATAFVIAQLVRVHFHLTNLNTTIHMGS 819 (847)
Q Consensus 750 -~~~----~--~~~~~~t~~f~~~~~~~~~~~~~~rs~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (847)
... + .....+|++|.+++++|+++.+++|+.+.+++. .+|++++++++++.++..++ .|.+.....|++
T Consensus 882 ~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~ 960 (995)
T 3ar4_A 882 PHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLI-LYVDPLPMIFKL 960 (995)
T ss_dssp SCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHH-HHSTHHHHHTTC
T ss_pred ccccccccccccchhhhhHHHHHHHHHHHHHHHHhhccccchhccCCccCHHHHHHHHHHHHHHHHH-HHHHHHHHhhcc
Confidence 000 0 023578999999999999999999997643222 24667777777665554443 344444556889
Q ss_pred cccChhhHHHHHHHHhh--hHHHHHHhhc
Q 003103 820 SFVSVHDFSWYLFIETS--SLSEMMHLFQ 846 (847)
Q Consensus 820 ~~~~~~~~~~~l~i~~~--~f~~~~~~~~ 846 (847)
.++++.+|.+++++.+. .++|..|++.
T Consensus 961 ~~l~~~~w~~~~~~~~~~~~~~e~~k~~~ 989 (995)
T 3ar4_A 961 KALDLTQWLMVLKISLPVIGLDEILKFIA 989 (995)
T ss_dssp CCCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999988877655 4899998774
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-86 Score=790.07 Aligned_cols=525 Identities=23% Similarity=0.344 Sum_probs=451.5
Q ss_pred CchhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEE-CCeEEEEeCCCCCCCcEEEEcCCCeeccceEE
Q 003103 96 PDWQDFV-GIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR-DGRWSEQDASILVPGDVISIKLGDIVPADARL 173 (847)
Q Consensus 96 ~~~~~~~-~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r-dg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~l 173 (847)
..|++++ +++++++++..++.++++|+.+++++|.++.+++++++| ||++++|++++|+|||+|.|++||+|||||+|
T Consensus 185 ~~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~v 264 (736)
T 3rfu_A 185 AVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEV 264 (736)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEE
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEE
Confidence 4566655 566889999999999999999999999999999999998 99999999999999999999999999999999
Q ss_pred EeeCceEEEeccccCCCceeecCCCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhcc-CCCCchHHHHHHHHHHH
Q 003103 174 LEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFC 252 (847)
Q Consensus 174 l~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~~~~~~ 252 (847)
++| .+.||||+|||||.|+.|.+|+.+|+||.+.+|.++++|++||.+|.+|||.++++++ .+++++|+.+++++.++
T Consensus 265 l~G-~~~VDES~LTGES~Pv~K~~gd~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~ 343 (736)
T 3rfu_A 265 QEG-RSFVDESMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWF 343 (736)
T ss_dssp CSS-CEEEECSSSTTCSSCEEECTTCEECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHH
T ss_pred EEC-ceEeeecccCCccccEEeccCCcCCCceEeccceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHH
Confidence 999 5789999999999999999999999999999999999999999999999999999876 47789999999999887
Q ss_pred HHHHHHHHHHHHHhhhhccc-cchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceeccchhhhhcCCeEEE
Q 003103 253 ICSIAVGIVAEIIIMYPVQH-RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVL 331 (847)
Q Consensus 253 ~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i 331 (847)
+..+++..++.+++++.... ..|..++..++++++++|||+|++++++++..+..+++++|+++|+++++|++|++|++
T Consensus 344 v~~vl~ia~~~~~~w~~~~~~~~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i 423 (736)
T 3rfu_A 344 VPAVILVAVLSFIVWALLGPQPALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTL 423 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSSSTTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEE
Confidence 66555544443333333222 24778899999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCccccCceEEEEEeeeecccCCChHHHHHHHHHhccccCcchHHHHHHHhcCChHHHhccceEEEeecCCCCCcc
Q 003103 332 CSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKR 411 (847)
Q Consensus 332 ~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~s~~k~ 411 (847)
|||||||||+|+|+|.++. ..+.+.++++.+++..+..+. ||++.|+++++.+. +.......+|++..++
T Consensus 424 ~fDKTGTLT~g~~~v~~i~----~~~~~~~~~l~~aa~le~~s~-hPla~Aiv~~a~~~-----~~~~~~~~~f~~~~g~ 493 (736)
T 3rfu_A 424 VVDKTGTLTEGHPKLTRIV----TDDFVEDNALALAAALEHQSE-HPLANAIVHAAKEK-----GLSLGSVEAFEAPTGK 493 (736)
T ss_dssp EECCBTTTBCSSCEEEEEE----ESSSCHHHHHHHHHHHHHSSC-CHHHHHHHHHHHTT-----CCCCCCCSCCCCCTTT
T ss_pred EEeCCCCCcCCceEEEEEE----ecCCCHHHHHHHHHHHhhcCC-ChHHHHHHHHHHhc-----CCCccCcccccccCCc
Confidence 9999999999999999876 235677788888777665554 99999999876432 2222334578777766
Q ss_pred eEEEEEcCCCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEeccc
Q 003103 412 TALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLF 491 (847)
Q Consensus 412 ~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~ 491 (847)
.... ..+|+. +.+|+++.+.+..... ..+.+..++++++|+|++++|++. +++|+++++
T Consensus 494 gv~~--~~~g~~--~~~G~~~~~~~~~~~~----~~~~~~~~~~~~~G~~vl~va~d~-------------~~~G~i~i~ 552 (736)
T 3rfu_A 494 GVVG--QVDGHH--VAIGNARLMQEHGGDN----APLFEKADELRGKGASVMFMAVDG-------------KTVALLVVE 552 (736)
T ss_dssp EEEE--CSSSSC--EEEESHHHHHHHCCCC----HHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEEE
T ss_pred eEEE--EECCEE--EEEcCHHHHHHcCCCh----hHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEEee
Confidence 5332 335543 4579999887654432 235566788999999999999854 899999999
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
|++|++++++|++||++|++++|+|||+..+|..+|+++||. .++++++|
T Consensus 553 D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~------------------------------~v~a~~~P 602 (736)
T 3rfu_A 553 DPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIK------------------------------KVVAEIMP 602 (736)
T ss_dssp CCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCC------------------------------CEECSCCH
T ss_pred ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC------------------------------EEEEecCH
Confidence 999999999999999999999999999999999999999984 27999999
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHH
Q 003103 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT 651 (847)
Q Consensus 572 ~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i 651 (847)
+||.++|+.+|++|+.|+|+|||.||+|||++||||||||+|+|+++++||+|+.+++++.+++++++||++++||++|+
T Consensus 603 ~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl 682 (736)
T 3rfu_A 603 EDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNL 682 (736)
T ss_dssp HHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEESSSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeCCccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHh-hcCCccHHHHH
Q 003103 652 IYAVSITIRIVLGFMLIALI-WKFDFSPFMVL 682 (847)
Q Consensus 652 ~~~~~~n~~~~~~~~~~~~~-~~~~~~~~~~l 682 (847)
.|++.+|+..++...+.++. +++.++|+.-.
T Consensus 683 ~~a~~yN~~~iplAag~l~p~~G~~l~P~~aa 714 (736)
T 3rfu_A 683 FFAFIYNVLGVPLAAGVLYPLTGLLLSPMIAA 714 (736)
T ss_dssp HHHHHHHHHHHHHHHTSSTTTSSCCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhhHHHHH
Confidence 99999998766544333222 24456776543
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-84 Score=768.69 Aligned_cols=528 Identities=23% Similarity=0.354 Sum_probs=443.4
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEee
Q 003103 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (847)
Q Consensus 97 ~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g 176 (847)
+|..+++++++++++..++.++++|++++++++.++.+++++|+|||++++|+++||+|||+|.|++||+|||||+|++|
T Consensus 95 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G 174 (645)
T 3j08_A 95 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG 174 (645)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEEC
Confidence 34456667778888888888888888888999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEeccccCCCceeecCCCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhccC-CCCchHHHHHHHHHHHHHH
Q 003103 177 DPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICS 255 (847)
Q Consensus 177 ~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 255 (847)
.+.||||+|||||.|+.|++||.+|+||.+.+|.++++|++||.+|.+|++.+++++++ +++++++.++++..+++..
T Consensus 175 -~~~VdeS~LTGES~Pv~K~~g~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~ 253 (645)
T 3j08_A 175 -ESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPT 253 (645)
T ss_dssp -CEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHH
T ss_pred -cEEEEcccccCCCCceecCCCCEeeccEEEecCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999998875 7889999999999887655
Q ss_pred HHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceeccchhhhhcCCeEEEEecC
Q 003103 256 IAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 335 (847)
Q Consensus 256 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DK 335 (847)
+++..++.++.++...+.++..++..++++++++|||+|++++++++..+..+++++|+++|+++++|++|++|++||||
T Consensus 254 vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDK 333 (645)
T 3j08_A 254 VLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDK 333 (645)
T ss_dssp HHHHHHHHHHCSSCCCSCSCCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEG
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcC
Confidence 55544443333333334567778888999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCceEEEEEeeeecccCCChHHHHHHHHHhccccCcchHHHHHHHhcCChHHHhccceEEEeecCCCCCcceEEE
Q 003103 336 TGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALT 415 (847)
Q Consensus 336 TGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~s~~k~~~v~ 415 (847)
|||||+|+|++.++.. .+.++++++.+++.++..+. ||++.|+++++.+.. .+.....+|++...+....
T Consensus 334 TGTLT~~~~~v~~~~~----~~~~~~~~l~~aa~~e~~s~-hPla~Aiv~~a~~~g-----~~~~~~~~~~~~~g~g~~~ 403 (645)
T 3j08_A 334 TGTLTKGKPEVTDLVP----LNGDERELLRLAAIAERRSE-HPIAEAIVKKALEHG-----IELGEPEKVEVIAGEGVVA 403 (645)
T ss_dssp GGTSSSSCCEEEEEEE----SSSCHHHHHHHHHHHHTTCC-SHHHHHHHHHHHHTT-----CCCCSCCCCEEETTTEEEE
T ss_pred cccccCCCeEEEEEEe----CCCCHHHHHHHHHHHhhcCC-ChhHHHHHHHHHhcC-----CCcCCccceEEecCCceEE
Confidence 9999999999999874 24567788888887766554 999999998764211 1111111122111111100
Q ss_pred EEcCCCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCCC
Q 003103 416 YIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPR 495 (847)
Q Consensus 416 ~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr 495 (847)
..+.+|+++.+.+... +.++.+.+..+++.++|+|+++++++. +++|+++++|++|
T Consensus 404 --------~~v~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~l~va~~~-------------~~~G~i~~~D~l~ 459 (645)
T 3j08_A 404 --------DGILVGNKRLMEDFGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLK 459 (645)
T ss_dssp --------TTEEEECHHHHHHTTC---CCCHHHHHHHHHHHTTTCCCEEEEETT-------------EEEEEEEEECCCT
T ss_pred --------EEEEECCHHHHHhcCC---CccHHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEEecCCch
Confidence 1245789888765332 223456777888999999999999853 8999999999999
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHH
Q 003103 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKY 575 (847)
Q Consensus 496 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~ 575 (847)
|+++++|++||++|++++|+|||+..+|.++|+++|+. .+|+|++|+||.
T Consensus 460 ~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------~~~~~~~P~~K~ 509 (645)
T 3j08_A 460 ESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------LVIAEVLPHQKS 509 (645)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------EEECSCCTTCHH
T ss_pred hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC------------------------------EEEEeCCHHhHH
Confidence 99999999999999999999999999999999999984 279999999999
Q ss_pred HHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 003103 576 EIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 655 (847)
Q Consensus 576 ~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~ 655 (847)
++|+.+|++ +.|+|+|||.||+|||++||+|||||+|++.++++||+++.+++++.+++++++||++++|+++++.|++
T Consensus 510 ~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~ 588 (645)
T 3j08_A 510 EEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWAL 588 (645)
T ss_dssp HHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEECCCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEeCCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-hhcCCccHHHHHHHHHHhhh
Q 003103 656 SITIRIVLGFMLIAL-IWKFDFSPFMVLIIAILNDG 690 (847)
Q Consensus 656 ~~n~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~ 690 (847)
++|+..++...+.++ +++..++|+.-.+...+.+.
T Consensus 589 ~~N~~~i~la~~~~~~~~g~~l~p~~a~~~m~~ss~ 624 (645)
T 3j08_A 589 IYNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSV 624 (645)
T ss_dssp HHHHHHHHHHTTTTTTTCCCSCCHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHhHhhhcccccCHHHHHHHHhcchH
Confidence 999875554333222 23446778765444444443
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-84 Score=774.29 Aligned_cols=528 Identities=23% Similarity=0.353 Sum_probs=444.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEee
Q 003103 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (847)
Q Consensus 97 ~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g 176 (847)
+|..+++++++++++..++.+.++|+++++++++++.+++++|+|||++++|+++||+|||+|.|++||+|||||+|++|
T Consensus 173 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G 252 (723)
T 3j09_A 173 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG 252 (723)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEEC
Confidence 34455667778888888888888888889999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEeccccCCCceeecCCCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhccC-CCCchHHHHHHHHHHHHHH
Q 003103 177 DPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICS 255 (847)
Q Consensus 177 ~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 255 (847)
.+.||||+|||||.|+.|++||.+|+||.+.+|.++++|++||.+|.+|++.+++++++ +++++++.+++++.+++..
T Consensus 253 -~~~VdeS~LTGES~pv~K~~g~~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~ 331 (723)
T 3j09_A 253 -ESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPT 331 (723)
T ss_dssp -CEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHH
T ss_pred -CeEEecccccCCCcceeecCCCeeccceEEecCcEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999998875 7889999999999887665
Q ss_pred HHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceeccchhhhhcCCeEEEEecC
Q 003103 256 IAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 335 (847)
Q Consensus 256 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DK 335 (847)
+++..++.++.++...+.++..++..++++++++|||+|++++++++..+..+++++|+++|+++++|++|++|++||||
T Consensus 332 vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDK 411 (723)
T 3j09_A 332 VLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDK 411 (723)
T ss_dssp HHHHHHHHHTTSCSSTTCTTCCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEH
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcC
Confidence 55544443333333335567788999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCceEEEEEeeeecccCCChHHHHHHHHHhccccCcchHHHHHHHhcCChHHHhccceEEEeecCCCCCcceEEE
Q 003103 336 TGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALT 415 (847)
Q Consensus 336 TGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~s~~k~~~v~ 415 (847)
|||||+|+|+|.++.. .+.++++++.+++.++..+. ||++.|+++++.+.. .......+|++...+.. .
T Consensus 412 TGTLT~g~~~v~~~~~----~~~~~~~~l~~aa~~e~~s~-hP~~~Ai~~~a~~~~-----~~~~~~~~~~~~~g~g~-~ 480 (723)
T 3j09_A 412 TGTLTKGKPEVTDLVP----LNGDERELLRLAAIAERRSE-HPIAEAIVKKALEHG-----IELGEPEKVEVIAGEGV-V 480 (723)
T ss_dssp HHHTSCSCCEEEEEEE----SSSCHHHHHHHHHHHHTTCC-SHHHHHHHHHHHHTT-----CCCCSCCCCEEETTTEE-E
T ss_pred CCccccCceEEEEEEe----CCCCHHHHHHHHHHHhccCC-CchhHHHHHHHHhcC-----CCcCCccceEEecCCce-E
Confidence 9999999999999874 24567788888877766554 999999998764211 11001111221111111 0
Q ss_pred EEcCCCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCCC
Q 003103 416 YIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPR 495 (847)
Q Consensus 416 ~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr 495 (847)
+ ..+.+|+++.+.+... +.++.+.+..++++++|+|+++++++. +++|+++++|++|
T Consensus 481 -----~--~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~va~~~-------------~~~G~i~i~D~~~ 537 (723)
T 3j09_A 481 -----A--DGILVGNKRLMEDFGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLK 537 (723)
T ss_dssp -----E--TTEEEECHHHHHHTTC---CCCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEEECCSC
T ss_pred -----E--EEEEECCHHHHHhcCC---CccHHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEeecCCcc
Confidence 0 1245799888765332 223456777889999999999999853 8999999999999
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHH
Q 003103 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKY 575 (847)
Q Consensus 496 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~ 575 (847)
|+++++|++||++|++++|+|||+..+|..+|+++|+. .+|+|++|+||.
T Consensus 538 ~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------~~~~~~~P~~K~ 587 (723)
T 3j09_A 538 ESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------LVIAEVLPHQKS 587 (723)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------EEECSCCTTCHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc------------------------------EEEccCCHHHHH
Confidence 99999999999999999999999999999999999984 279999999999
Q ss_pred HHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 003103 576 EIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 655 (847)
Q Consensus 576 ~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~ 655 (847)
++|+.+|++ +.|+|+|||.||+|||++||||||||+|+|+++++||+++.+++++.+++++++||++++|+++++.|++
T Consensus 588 ~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~ 666 (723)
T 3j09_A 588 EEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWAL 666 (723)
T ss_dssp HHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECCCCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEeCCCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-hhcCCccHHHHHHHHHHhhh
Q 003103 656 SITIRIVLGFMLIAL-IWKFDFSPFMVLIIAILNDG 690 (847)
Q Consensus 656 ~~n~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~ 690 (847)
++|+..++...+.++ ++++.++|+.-.+...+.+.
T Consensus 667 ~~n~~~i~~a~~~~~~~~g~~l~p~~a~~~m~~ss~ 702 (723)
T 3j09_A 667 IYNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSV 702 (723)
T ss_dssp HHHHHHHHHHHHTTSSCCCCSCCHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHhhhhccccccCHHHHHHHHhccHH
Confidence 999875554433322 23446788765444444443
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-34 Score=306.34 Aligned_cols=259 Identities=21% Similarity=0.308 Sum_probs=199.2
Q ss_pred HHHHhhcCCceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccCCChHHHHHHHHHhccccCcchHHHHHH
Q 003103 305 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIV 384 (847)
Q Consensus 305 ~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~ 384 (847)
+..+++++|+++|+++++|.++++++||||||||||+|+|.+.++. +.++++.+++..+..+ .||+..++.
T Consensus 5 a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~--------~~~~~l~~~~~~e~~s-~hp~a~ai~ 75 (263)
T 2yj3_A 5 LYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI--------GDSLSLAYAASVEALS-SHPIAKAIV 75 (263)
Confidence 4578999999999999999999999999999999999999997753 3445666665555444 489999887
Q ss_pred HhcCChHHHhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEE
Q 003103 385 GMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLG 464 (847)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~ 464 (847)
.++.+........+..+.++-.+.+. . .++ ..+..|+++ +|.+ +.
T Consensus 76 ~~~~~~g~~~~~~~~~~~~~G~g~~~----~---~~~--~~~~~G~~~-------------------------~~~~-~~ 120 (263)
T 2yj3_A 76 KYAKEQGVKILEVKDFKEISGIGVRG----K---ISD--KIIEVKKAE-------------------------NNND-IA 120 (263)
Confidence 76542210000000000000000000 0 000 001112111 2333 44
Q ss_pred EEeeecCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccC
Q 003103 465 VARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG 544 (847)
Q Consensus 465 ~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~ 544 (847)
++++. .+.|.+.+.|+++|++.++++.|++.|+++.|+|||+..++..+++++|+..
T Consensus 121 ~~~~~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------- 177 (263)
T 2yj3_A 121 VYING-------------EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE---------- 177 (263)
Confidence 44433 6899999999999999999999999999999999999999999999999842
Q ss_pred ccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEE
Q 003103 545 QDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624 (847)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDiv 624 (847)
+|+.+.|++|...++.++..++.|+|+|||.||++|+++|++|+++|++++.+++.||++
T Consensus 178 --------------------~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g~~~~~~~~~ad~v 237 (263)
T 2yj3_A 178 --------------------YYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMGNGVDISKNVADII 237 (263)
Confidence 477778999999999999999999999999999999999999999998899999999999
Q ss_pred EcCCChhhHHHHHHHHHHHHHHHHHH
Q 003103 625 LTEPGLSVIISAVLTSRAIFQRMKNY 650 (847)
Q Consensus 625 l~~~~~~~i~~~i~~gR~~~~~i~~~ 650 (847)
+.++++..++.++.++|+++++|++|
T Consensus 238 ~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 238 LVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 99999999999999999999999875
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.95 E-value=7.6e-28 Score=258.44 Aligned_cols=279 Identities=28% Similarity=0.422 Sum_probs=207.7
Q ss_pred HHHHhhcCCceeccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccCCChHHHHHHHHHhccccCcchHHHHHH
Q 003103 305 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIV 384 (847)
Q Consensus 305 ~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~ 384 (847)
|.++++|+|+++|+++++|++++++++|||||||||.+++.+.++.. . .+ +.++++.+++..+..+ .||++.++.
T Consensus 9 ~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~--~-~~-~~~~~l~~~~~~e~~s-~hp~~~a~~ 83 (287)
T 3a1c_A 9 GSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVP--L-NG-DERELLRLAAIAERRS-EHPIAEAIV 83 (287)
T ss_dssp -----CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEE--S-SS-CHHHHHHHHHHHTTTC-CSHHHHHHH
T ss_pred hHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEe--C-CC-CHHHHHHHHHHHhhcC-CCHHHHHHH
Confidence 67899999999999999999999999999999999999999987654 2 23 6777888777666544 499999988
Q ss_pred HhcCChHHHhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEE
Q 003103 385 GMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLG 464 (847)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~ 464 (847)
.++..........+....++ .+ .+. . . .+.+|+++.+.+.... .++.+.+..+.+..+|.++++
T Consensus 84 ~~~~~~g~~~~~~~~~~~~~-----G~-~~~--~--~---~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~i~ 147 (287)
T 3a1c_A 84 KKALEHGIELGEPEKVEVIA-----GE-GVV--A--D---GILVGNKRLMEDFGVA---VSNEVELALEKLEREAKTAVI 147 (287)
T ss_dssp HHHHHTTCCCCCCSCEEEET-----TT-EEE--E--T---TEEEECHHHHHHTTCC---CCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhcCCCccccccceeec-----CC-CeE--E--E---EEEECCHHHHHhcCCC---ccHHHHHHHHHHHhCCCeEEE
Confidence 76531110000001111111 00 000 0 1 1345776654432211 112344556778889999999
Q ss_pred EEeeecCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccC
Q 003103 465 VARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG 544 (847)
Q Consensus 465 ~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~ 544 (847)
+++.. .+.+.+...++++|++.++++.|+++|+++.++||++...+..+.+.+|+..
T Consensus 148 ~~~d~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~---------- 204 (287)
T 3a1c_A 148 VARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------- 204 (287)
T ss_dssp EEETT-------------EEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE----------
T ss_pred EEECC-------------EEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCce----------
Confidence 99864 7899999999999999999999999999999999999999999999999842
Q ss_pred ccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEE
Q 003103 545 QDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624 (847)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDiv 624 (847)
.|..+.|+.|...++.++.. ..++|+||+.||++|.+.|+++++++++.+..++.||++
T Consensus 205 --------------------~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~~~~~~ad~v 263 (287)
T 3a1c_A 205 --------------------VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIV 263 (287)
T ss_dssp --------------------EECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEECCCSCCSSCCSSEE
T ss_pred --------------------eeeecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEEeCCCCHHHHhhCCEE
Confidence 46667799999999999888 889999999999999999999999987776677889999
Q ss_pred EcCCChhhHHHHHHHHHHHHHHHH
Q 003103 625 LTEPGLSVIISAVLTSRAIFQRMK 648 (847)
Q Consensus 625 l~~~~~~~i~~~i~~gR~~~~~i~ 648 (847)
+.++++..+...+..+|++++||+
T Consensus 264 ~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 264 LIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp ESSSCTHHHHHHHHTTC-------
T ss_pred EeCCCHHHHHHHHHHHHHHHHhhC
Confidence 988999999999999999999885
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-28 Score=221.90 Aligned_cols=110 Identities=27% Similarity=0.469 Sum_probs=105.1
Q ss_pred HHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCeeccceEEEeeCceEEEeccccCCCceeecCCCCccccc
Q 003103 125 AAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSG 204 (847)
Q Consensus 125 ~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~G 204 (847)
++++|+++.+++++|+|||++++|++++|+|||+|.+++||+|||||++++|+ +.||||+|||||.|+.|.+||.+|+|
T Consensus 2 al~~L~~l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~-~~vdeS~LTGEs~pv~k~~g~~v~aG 80 (113)
T 2hc8_A 2 AIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE-SYVDESMISGEPVPVLKSKGDEVFGA 80 (113)
T ss_dssp HHHHHHHHSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC-EEEECHHHHCCSSCEEECTTCEECTT
T ss_pred HHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEce-EEEEccccCCCCccEEECCCCEEEeC
Confidence 46778888999999999999999999999999999999999999999999995 89999999999999999999999999
Q ss_pred eeeeeceEEEEEEeccchhHhhhHHHhhhcc
Q 003103 205 STCKQGEIEAVVIATGVHTFFGKAAHLVDST 235 (847)
Q Consensus 205 t~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 235 (847)
|.+.+|.+.++|++||.+|.+|+|.++++++
T Consensus 81 t~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a 111 (113)
T 2hc8_A 81 TINNTGVLKIRATRVGGETLLAQIVKLVEDA 111 (113)
T ss_dssp CEECSSCEEEEEEECGGGSHHHHHHHHHHHH
T ss_pred CEEeeceEEEEEEEecCcCHHHHHHHHHHHh
Confidence 9999999999999999999999999988754
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.8e-28 Score=222.15 Aligned_cols=116 Identities=27% Similarity=0.446 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEECCe------EEEEeCCCCCCCcEEEEcCCCeeccceEEEeeCceEEEeccccCCCce
Q 003103 119 ENNAGNAAAALMANLAPKTKVLRDGR------WSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLP 192 (847)
Q Consensus 119 e~~~~~~~~~l~~~~~~~~~V~rdg~------~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~~~Vdes~LTGEs~p 192 (847)
++|+++++++|+++.+++++|+|+|+ +++|++++|+|||+|.|++||+|||||+|++|+ ..||||+|||||.|
T Consensus 2 ~~ka~~~l~~L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~-~~vdeS~LTGEs~p 80 (124)
T 2kij_A 2 SFTMSEALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGH-SMVDESLITGEAMP 80 (124)
T ss_dssp ----CCHHHHHHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCC-CEEECTTTTCCSSC
T ss_pred hHHHHHHHHHHhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEcc-EEEEeccccCCCcc
Confidence 56788899999999999999999764 789999999999999999999999999999996 58999999999999
Q ss_pred eecCCCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhcc
Q 003103 193 VTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 235 (847)
Q Consensus 193 v~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 235 (847)
+.|.+|+.+|+||.+.+|.+.++|++||.+|.+|+|.++++++
T Consensus 81 v~k~~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 81 VAKKPGSTVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp EECCTTEEECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred EEeCCCCEEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999998764
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-25 Score=238.95 Aligned_cols=276 Identities=28% Similarity=0.393 Sum_probs=201.4
Q ss_pred eccchhhhhcCCeEEEEecCCCccccCceEEEEEeeeecccCCChHHHHHHHHHhccccCcchHHHHHHHhcCChHHHhc
Q 003103 316 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARA 395 (847)
Q Consensus 316 vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~ 395 (847)
+|+++++|.+++++.||||++||||.|+++|.++.. .. + +.++++.+++....... ++...++...+........
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~--~~-~-~~~~~~~~~~~~~~~s~-~~~~~a~~~~~~~~g~~~~ 75 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVG--FN-H-SEDELLQIAASLEARSE-HPIAAAIVEEAEKRGFGLT 75 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEE--SS-S-CHHHHHHHHHHHHTTCC-SHHHHHHHHHHHHTTCCCC
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEe--cC-C-CHHHHHHHHHHhhccCC-CHHHHHHHHHHHhcCCCCC
Confidence 588999999999999999999999999999998764 22 3 67777777766655444 7777777665432110011
Q ss_pred cceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCC
Q 003103 396 GVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK 475 (847)
Q Consensus 396 ~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~ 475 (847)
....+..++.. ..... .++. .+..|.++.+.+...... +....+..++.+.+.+++..
T Consensus 76 ~~~~~~~~~g~----~~~~~---~~~~--~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~------ 133 (280)
T 3skx_A 76 EVEEFRAIPGK----GVEGI---VNGR--RYMVVSPGYIRELGIKTD-------ESVEKLKQQGKTVVFILKNG------ 133 (280)
T ss_dssp CCEEEEEETTT----EEEEE---ETTE--EEEEECHHHHHHTTCCCC-------TTHHHHHTTTCEEEEEEETT------
T ss_pred CccceeecCCC----EEEEE---ECCE--EEEEecHHHHHHcCCCch-------HHHHHHHhCCCeEEEEEECC------
Confidence 11222222211 11111 1232 234577777665443221 22345667888888887754
Q ss_pred CCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcch
Q 003103 476 ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALP 555 (847)
Q Consensus 476 ~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~ 555 (847)
.++|.+.+.|+++|++.++++.|++.|+++.++||++...+..+.+++|+..
T Consensus 134 -------~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~--------------------- 185 (280)
T 3skx_A 134 -------EVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDD--------------------- 185 (280)
T ss_dssp -------EEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------
T ss_pred -------EEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChh---------------------
Confidence 7899999999999999999999999999999999999999999999999842
Q ss_pred HHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHH
Q 003103 556 VDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIIS 635 (847)
Q Consensus 556 ~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~ 635 (847)
.|..+.|.+|...++.+.+..+ ++|+||+.||++|++.|++|++||++++.+++.||.++..+++..+..
T Consensus 186 ---------~f~~~~~~~k~~~~k~~~~~~~-~~~vGD~~nDi~~~~~Ag~~va~~~~~~~~~~~a~~~~~~~~~~~l~~ 255 (280)
T 3skx_A 186 ---------YFAEVLPHEKAEKVKEVQQKYV-TAMVGDGVNDAPALAQADVGIAIGAGTDVAVETADIVLVRNDPRDVAA 255 (280)
T ss_dssp ---------EECSCCGGGHHHHHHHHHTTSC-EEEEECTTTTHHHHHHSSEEEECSCCSSSCCCSSSEECSSCCTHHHHH
T ss_pred ---------HhHhcCHHHHHHHHHHHHhcCC-EEEEeCCchhHHHHHhCCceEEecCCcHHHHhhCCEEEeCCCHHHHHH
Confidence 4777889999999999988774 589999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 003103 636 AVLTSRAIFQRMKNYTIYAVS 656 (847)
Q Consensus 636 ~i~~gR~~~~~i~~~i~~~~~ 656 (847)
+++.+|++++++++++.|++.
T Consensus 256 ~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 256 IVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp HHHHHHTCCC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999988764
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.8e-24 Score=233.32 Aligned_cols=145 Identities=12% Similarity=0.018 Sum_probs=115.4
Q ss_pred ccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHH--HhcCeEE
Q 003103 490 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELI--EKADGFA 567 (847)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~a 567 (847)
..+++||+++++++.|+++|++++|+|||+..++.++|+++|+..... .+..... ..+++.+.... ....+++
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~---~i~~n~l--~~~~~~~~~~~~~~~i~~~~ 212 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNV---KVVSNFM--DFDENGVLKGFKGELIHVFN 212 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTE---EEEEECE--EECTTSBEEEECSSCCCTTC
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccc---eEEeeeE--EEcccceeEeccccccchhh
Confidence 458999999999999999999999999999999999999999864210 0100000 00011000000 1134678
Q ss_pred EeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhh---hcCcceecc-------cccHHHhhccCEEEcCCChhhHHHHH
Q 003103 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK---KADIGIAVA-------DATDAARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 568 r~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk---~AdVGIamg-------~g~~~a~~aaDivl~~~~~~~i~~~i 637 (847)
+..|.+|...+..+++.++.|+|+|||+||+||++ +||+||+|| ++++.+++++|+||++|++..++.+|
T Consensus 213 k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~i 292 (297)
T 4fe3_A 213 KHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSI 292 (297)
T ss_dssp HHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHH
T ss_pred cccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHH
Confidence 88999999999999999999999999999999955 999999999 78999999999999999999999988
Q ss_pred HH
Q 003103 638 LT 639 (847)
Q Consensus 638 ~~ 639 (847)
..
T Consensus 293 l~ 294 (297)
T 4fe3_A 293 LQ 294 (297)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.6e-18 Score=169.29 Aligned_cols=139 Identities=21% Similarity=0.366 Sum_probs=117.5
Q ss_pred ccCCChHHHHHHHHHhc--cccCcchHHHHHHHhcCCh--HHHhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCc
Q 003103 355 AKGVEKEHVILLAARAS--RTENQDAIDAAIVGMLADP--KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGA 430 (847)
Q Consensus 355 ~~~~~~~~~l~~~~~~~--~~~~~~~~~~ai~~~~~~~--~~~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa 430 (847)
..|.+.++++.+++.++ ....+||+|.|++.++... ...+..++.+.++||+|.+|||+++++..+|++.+++|||
T Consensus 10 ~~G~~~~~vl~~a~L~s~~~~~~~n~~d~Ail~~~~~~~~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGA 89 (170)
T 3gwi_A 10 ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGA 89 (170)
T ss_dssp TTSCBCHHHHHHHHHHHHHCCSCCCHHHHHHHHTSCHHHHHHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEEC
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhcChhhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCC
Confidence 35778899999999988 4456799999999987532 2335679999999999999999999987778889999999
Q ss_pred HHHHHHhcCC----------ChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCC---CCCCCCCceEEEEecccCC
Q 003103 431 PEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT---KESPGAPWQLVGLLPLFDP 493 (847)
Q Consensus 431 ~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~---~~~~e~~l~~lG~i~~~D~ 493 (847)
||.|+++|+. +++.++.+.+.+++|+++|+|||++|+|.++..+ ....|++|+|+|+++|-|.
T Consensus 90 pE~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 90 LQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDH 165 (170)
T ss_dssp HHHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEEEC-
T ss_pred cHHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCccccCCcEEEehhccccc
Confidence 9999999973 5567888999999999999999999999987543 2346999999999999885
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.41 E-value=1.4e-13 Score=137.58 Aligned_cols=126 Identities=21% Similarity=0.350 Sum_probs=106.8
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHH
Q 003103 501 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKR 580 (847)
Q Consensus 501 ~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~ 580 (847)
+++.|+++|+++.++||++...+..+++++|+.. +|... .+|...++.
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~------------------------------~f~~~--~~K~~~~~~ 101 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH------------------------------LFQGR--EDKLVVLDK 101 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE------------------------------EECSC--SCHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH------------------------------HhcCc--CChHHHHHH
Confidence 9999999999999999999999999999999842 12222 667777776
Q ss_pred Hhhc----CCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCC----hhhHHHHHHHHHHHHHHHHHHHH
Q 003103 581 LQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAVLTSRAIFQRMKNYTI 652 (847)
Q Consensus 581 lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~----~~~i~~~i~~gR~~~~~i~~~i~ 652 (847)
+.++ ...++|+||+.||.+|++.|++|++++++.+.+++.||+++.+++ +..+.+.+..+|..++++++++.
T Consensus 102 ~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~~ 181 (189)
T 3mn1_A 102 LLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVYL 181 (189)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTTS
T ss_pred HHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHHh
Confidence 6654 467899999999999999999999999999999999999998763 67788889999999999999999
Q ss_pred HHHHHH
Q 003103 653 YAVSIT 658 (847)
Q Consensus 653 ~~~~~n 658 (847)
|.+.+|
T Consensus 182 ~~~~~~ 187 (189)
T 3mn1_A 182 EGHHHH 187 (189)
T ss_dssp TTC---
T ss_pred cccccc
Confidence 887766
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.26 E-value=5e-12 Score=138.23 Aligned_cols=156 Identities=13% Similarity=0.133 Sum_probs=108.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
+++|++.+.++.|+++|+++.|+||+....+..+++++|+.......-.+.... .+.. +......++..|+
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~----~tg~-----~~~~~~~~kpk~~ 248 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGK----LTGQ-----VLGEVVSAQTKAD 248 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTE----EEEE-----EESCCCCHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCe----eeee-----ecccccChhhhHH
Confidence 689999999999999999999999999999999999999852100000000000 0000 0000011122333
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHHHHHHHHHHHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 652 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~ 652 (847)
-..++.+.++-....+.|+|||.||.+|++.|++|++| ++.+..++.||.++..+++..+..++.......++++.|+.
T Consensus 249 ~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~-~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~~~~~~ 327 (335)
T 3n28_A 249 ILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKLSWKSK 327 (335)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTCCCCC--
T ss_pred HHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhhhccccc
Confidence 44444444444456799999999999999999999999 88899999999999999999999999988877788888888
Q ss_pred HHHHHH
Q 003103 653 YAVSIT 658 (847)
Q Consensus 653 ~~~~~n 658 (847)
+.+.+|
T Consensus 328 ~~~~~~ 333 (335)
T 3n28_A 328 EGHHHH 333 (335)
T ss_dssp ------
T ss_pred cccccc
Confidence 887766
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=4.4e-11 Score=118.28 Aligned_cols=131 Identities=21% Similarity=0.222 Sum_probs=104.0
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhH
Q 003103 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574 (847)
Q Consensus 495 r~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK 574 (847)
.++..++|+.|++.|+++.++||++...+..+++++|+.. .|.. ...|
T Consensus 37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~------------------------------~~~~--~k~k 84 (180)
T 1k1e_A 37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL------------------------------FFLG--KLEK 84 (180)
T ss_dssp EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE------------------------------EEES--CSCH
T ss_pred ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce------------------------------eecC--CCCc
Confidence 4567799999999999999999999999999999999852 1221 2456
Q ss_pred HHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHH----HHHHHHHHHHHH
Q 003103 575 YEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII----SAVLTSRAIFQR 646 (847)
Q Consensus 575 ~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~----~~i~~gR~~~~~ 646 (847)
...++.+.++ | ..|+|+||+.||.+|++.|+++++++++.+..++.||+++.+++...+. +.+...|..+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~~ 164 (180)
T 1k1e_A 85 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSV 164 (180)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHH
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeCCccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchhh
Confidence 6666655433 4 5789999999999999999999999988899999999999877655554 444456777888
Q ss_pred HHHHHHHHHHH
Q 003103 647 MKNYTIYAVSI 657 (847)
Q Consensus 647 i~~~i~~~~~~ 657 (847)
++.++.|+.+.
T Consensus 165 ~~~~~~~~~~~ 175 (180)
T 1k1e_A 165 FDTAQGFLKSV 175 (180)
T ss_dssp HHCHHHHHHHG
T ss_pred hhhccchhhhh
Confidence 88777777654
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.15 E-value=5.4e-11 Score=118.84 Aligned_cols=123 Identities=18% Similarity=0.241 Sum_probs=98.8
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEe--ChhhHHHHH
Q 003103 501 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV--FPEHKYEIV 578 (847)
Q Consensus 501 ~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~--sP~qK~~iV 578 (847)
+++.|+++|+++.++||+....+..+++++|+.. +|... .|+-...+.
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~------------------------------~~~~~kpk~~~~~~~~ 103 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH------------------------------YYKGQVDKRSAYQHLK 103 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE------------------------------EECSCSSCHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc------------------------------ceeCCCChHHHHHHHH
Confidence 4999999999999999999999999999999853 12222 344455555
Q ss_pred HHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCC----hhhHHHHHHHHHHHHHHHHHHHHH
Q 003103 579 KRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAVLTSRAIFQRMKNYTIY 653 (847)
Q Consensus 579 ~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~----~~~i~~~i~~gR~~~~~i~~~i~~ 653 (847)
+.++-....++|+||+.||.+|++.|+++++++++.+..++.||+++.+++ +..+.+.+...|..++++.++..+
T Consensus 104 ~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~~~~ 182 (191)
T 3n1u_A 104 KTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGYLK 182 (191)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCEEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHh
Confidence 555545567999999999999999999999999989999999999998877 455666666777788877766654
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.1e-11 Score=124.11 Aligned_cols=101 Identities=21% Similarity=0.334 Sum_probs=83.2
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHH
Q 003103 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 579 (847)
Q Consensus 500 ~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~ 579 (847)
.+|+.|+++|+++.++||++...+..+++++|+.. +|... ..|...++
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~------------------------------~~~~~--k~k~~~~~ 106 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL------------------------------IYQGQ--DDKVQAYY 106 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE------------------------------EECSC--SSHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE------------------------------EeeCC--CCcHHHHH
Confidence 34999999999999999999999999999999852 22222 45666665
Q ss_pred HHhhc----CCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhh
Q 003103 580 RLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV 632 (847)
Q Consensus 580 ~lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~ 632 (847)
.+.++ ...++|+||+.||.+|++.|+++++|+++.+.+++.||+++.+++-..
T Consensus 107 ~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~na~~~~~~~ad~v~~~~~~~G 163 (195)
T 3n07_A 107 DICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRANYVTHIKGGHG 163 (195)
T ss_dssp HHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCHHHHHHCSEECSSCTTTT
T ss_pred HHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEECChHHHHHHhCCEEEcCCCCCC
Confidence 55443 356899999999999999999999999999999999999998766444
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.11 E-value=1.8e-10 Score=118.36 Aligned_cols=148 Identities=21% Similarity=0.136 Sum_probs=106.1
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC-CCCc-c---cCccc-c-cc-------------
Q 003103 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSS-L---LGQDK-D-AS------------- 550 (847)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~-~~~~-~---~~~~~-~-~~------------- 550 (847)
..++.+++.++|++|++.|++++++||++...+..+++++|+..... .+.. + .+... . ..
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~ 99 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 99 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHH
Confidence 34678899999999999999999999999999999999999853111 0000 0 01100 0 00
Q ss_pred ----------------------CCcchHHHHHHh--cCe-----EEEeCh--hhHHHHHHHHhhc-C---CEEEEEcCCc
Q 003103 551 ----------------------IAALPVDELIEK--ADG-----FAGVFP--EHKYEIVKRLQER-K---HICGMTGDGV 595 (847)
Q Consensus 551 ----------------------~~~~~~~~~~~~--~~v-----~ar~sP--~qK~~iV~~lq~~-g---~~V~miGDG~ 595 (847)
.+.+.++++.+. ..+ +-.+.| .+|...++.+.+. | ..|.++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~ 179 (227)
T 1l6r_A 100 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 179 (227)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred hcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcH
Confidence 001122222221 111 223446 6899998888764 2 4689999999
Q ss_pred CChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 596 NDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 596 ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
||.+|++.|++|++|+++.+..++.||+++.+++-..+.++++
T Consensus 180 nD~~m~~~ag~~va~~n~~~~~k~~a~~v~~~~~~~Gv~~~l~ 222 (227)
T 1l6r_A 180 NDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFK 222 (227)
T ss_dssp GGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred HhHHHHHHcCceEEecCchHHHHHhCCEEecCCCCcHHHHHHH
Confidence 9999999999999999999999999999998888888888775
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.6e-10 Score=112.50 Aligned_cols=134 Identities=17% Similarity=0.126 Sum_probs=96.1
Q ss_pred ccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH--HcCCCCC
Q 003103 458 RGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR--RLGMGTN 535 (847)
Q Consensus 458 ~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~--~~Gi~~~ 535 (847)
++.+.+++-....-.+.......+-..++.+.++|. .+|+.|++.|+++.++||+ ..+..+++ ++|+.
T Consensus 7 ~~ikliv~D~DGtL~d~~~~~~~~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-- 76 (168)
T 3ewi_A 7 KEIKLLVCNIDGCLTNGHIYVSGDQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-- 76 (168)
T ss_dssp CCCCEEEEECCCCCSCSCCBCCSSCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC--
T ss_pred hcCcEEEEeCccceECCcEEEcCCCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE--
Confidence 456666665543211111111111245667777776 3899999999999999999 56777888 55552
Q ss_pred CCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhc----CCEEEEEcCCcCChhhhhhcCcceecc
Q 003103 536 MYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVA 611 (847)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg 611 (847)
+|. .+++|...++.+.++ ...++|+||+.||.+|++.|+++++|+
T Consensus 77 -----------------------------~~~--g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~ 125 (168)
T 3ewi_A 77 -----------------------------TEV--SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPA 125 (168)
T ss_dssp -----------------------------EEC--SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECT
T ss_pred -----------------------------EEE--CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeC
Confidence 111 235688877776654 346899999999999999999999999
Q ss_pred cccHHHhhccCEEEcCCChhh
Q 003103 612 DATDAARSASDIVLTEPGLSV 632 (847)
Q Consensus 612 ~g~~~a~~aaDivl~~~~~~~ 632 (847)
++.+.+++.||+|+.+++=..
T Consensus 126 na~~~~k~~Ad~v~~~~~~~G 146 (168)
T 3ewi_A 126 DACSGAQKAVGYICKCSGGRG 146 (168)
T ss_dssp TCCHHHHTTCSEECSSCTTTT
T ss_pred ChhHHHHHhCCEEeCCCCCcc
Confidence 999999999999998765554
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.5e-10 Score=117.28 Aligned_cols=97 Identities=23% Similarity=0.328 Sum_probs=84.2
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHH
Q 003103 501 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKR 580 (847)
Q Consensus 501 ~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~ 580 (847)
+++.|+++|+++.++||++...+..+++++|+.. +|... .+|...++.
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~------------------------------~f~~~--k~K~~~l~~ 131 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH------------------------------LYQGQ--SDKLVAYHE 131 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE------------------------------EECSC--SSHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch------------------------------hhccc--CChHHHHHH
Confidence 8999999999999999999999999999999842 23333 667777777
Q ss_pred Hhhc----CCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCC
Q 003103 581 LQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629 (847)
Q Consensus 581 lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~ 629 (847)
+.++ ...|+|+||+.||.+|++.|+++++++++.+.+++.||+++.+++
T Consensus 132 ~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~~~~~~Ad~v~~~~~ 184 (211)
T 3ij5_A 132 LLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRIKG 184 (211)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCT
T ss_pred HHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeCCccHHHHhhCCEEEeCCC
Confidence 6654 567899999999999999999999999889999999999998764
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.06 E-value=4e-10 Score=110.97 Aligned_cols=104 Identities=25% Similarity=0.318 Sum_probs=87.3
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHH
Q 003103 501 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKR 580 (847)
Q Consensus 501 ~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~ 580 (847)
+++.|+++|+++.++||+....+..+++++|+. +|+.. ..|...++.
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-------------------------------~~~~~--~~k~~~l~~ 93 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-------------------------------VLHGI--DRKDLALKQ 93 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-------------------------------EEESC--SCHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-------------------------------eEeCC--CChHHHHHH
Confidence 899999999999999999999999999999983 12222 567777766
Q ss_pred Hhhc----CCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHH
Q 003103 581 LQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 581 lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i 637 (847)
+.++ ...+.|+||+.||.+|++.|+++++++++.+..++.||+++.+++...++..+
T Consensus 94 ~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~~~~~~~ad~v~~~~~~~g~~~~l 154 (176)
T 3mmz_A 94 WCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTVPGGDGAIREI 154 (176)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHH
T ss_pred HHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECCChhHHHHHhCCEEecCCCCCcHHHHH
Confidence 6554 35689999999999999999999999988999999999999888866655444
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=1.9e-09 Score=102.82 Aligned_cols=140 Identities=19% Similarity=0.264 Sum_probs=93.7
Q ss_pred CCCccccCceEEEEEeeeecccCCChHHHHHHHHHhccccCcchHHHHHHHhcCCh-HHHhccce--EEEeecCCCCCcc
Q 003103 335 KTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADP-KEARAGVR--EVHFLPFNPVDKR 411 (847)
Q Consensus 335 KTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~-~~~~~~~~--~~~~~pf~s~~k~ 411 (847)
..||+|-|++.+.++.. ..+.++++++.+++.++..+. ||++.|++.++.+. .......+ ..++.+|++..++
T Consensus 13 ~~~tit~gnr~vt~v~~---~~g~~e~elL~lAAs~E~~Se-HPla~AIv~~A~~~~~l~~~~~~~~~~~~~~F~a~~G~ 88 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIP---AQGVDEKTLADAAQLASLADE-TPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRM 88 (156)
T ss_dssp --------CEEEEEEEE---CTTSCHHHHHHHHHHTTSSCC-SHHHHHHHHHHHHHTTCCCCCHHHHTCEEEEEETTTTE
T ss_pred CCCceecCCCeEEEEEe---cCCCCHHHHHHHHHHHhCcCC-CHHHHHHHHHHHHhcCCCcccccccccceeeccccCCC
Confidence 47999999999998763 346788899999988876554 99999999876432 10000000 1235789888886
Q ss_pred eEEEEEcCCCcEEEEEcCcHHHHHHhcCC-ChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecc
Q 003103 412 TALTYIDSDGNWHRASKGAPEQILALCNC-REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPL 490 (847)
Q Consensus 412 ~~v~~~~~~g~~~~~~KGa~e~i~~~~~~-~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~ 490 (847)
..+.+ +| ..+.+|+++.|.+++.. ..+.+..+.+.+++++++|.+++++|... +++|++++
T Consensus 89 ~Gv~v---~G--~~v~vGn~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA~d~-------------~l~GvIal 150 (156)
T 1svj_A 89 SGINI---DN--RMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIAL 150 (156)
T ss_dssp EEEEE---TT--EEEEEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEE
T ss_pred CeEEE---CC--EEEEEeCcHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEEECC-------------EEEEEEEE
Confidence 66643 56 45789998766655431 11122346777889999999999999754 89999999
Q ss_pred cCCCCc
Q 003103 491 FDPPRH 496 (847)
Q Consensus 491 ~D~lr~ 496 (847)
.|++||
T Consensus 151 aD~iK~ 156 (156)
T 1svj_A 151 KDIVKG 156 (156)
T ss_dssp EECCCC
T ss_pred ecCCCC
Confidence 999996
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=8.6e-10 Score=106.96 Aligned_cols=100 Identities=29% Similarity=0.321 Sum_probs=82.0
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHH
Q 003103 501 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKR 580 (847)
Q Consensus 501 ~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~ 580 (847)
+++.|++.|+++.++||++...+..+++++|+... |... ..|...++.
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~------------------------------~~~~--kpk~~~~~~ 86 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYL------------------------------FQGV--VDKLSAAEE 86 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEE------------------------------ECSC--SCHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEe------------------------------eccc--CChHHHHHH
Confidence 89999999999999999999999999999998531 2212 345555444
Q ss_pred Hhhc----CCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhh
Q 003103 581 LQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV 632 (847)
Q Consensus 581 lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~ 632 (847)
+.++ ...+.|+||+.||.+|++.|+++++++++.+..++.||+++.+++...
T Consensus 87 ~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g 142 (164)
T 3e8m_A 87 LCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEKRGGEG 142 (164)
T ss_dssp HHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCTTSCHHHHTTCSSCCCCCTTTT
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcCChHHHHHHhCcEEeccCCCCc
Confidence 4333 356899999999999999999999999999999999999999888444
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.89 E-value=2.1e-10 Score=125.05 Aligned_cols=165 Identities=13% Similarity=0.116 Sum_probs=108.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccc--------------cccCC---cch
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDK--------------DASIA---ALP 555 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~--------------~~~~~---~~~ 555 (847)
++++++.++++.|++ |+.+.++|||+...+....+.+++...... ..+..... ...+. +++
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 180 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGELHG-TEVDFDSIAVPEGLREELLSIIDVIASLSGEEL 180 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEEEE-EBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhhcc-cccchhhhccccccceeEEecCHHHHhhhhHHH
Confidence 568999999999999 999999999997777777777777321100 00000000 00000 011
Q ss_pred HHHHHHhc------CeEE---E-eChhhHHHHHHHHhhcC--CEEEEEcCCcCChhhhhhc----CcceecccccHHHhh
Q 003103 556 VDELIEKA------DGFA---G-VFPEHKYEIVKRLQERK--HICGMTGDGVNDAPALKKA----DIGIAVADATDAARS 619 (847)
Q Consensus 556 ~~~~~~~~------~v~a---r-~sP~qK~~iV~~lq~~g--~~V~miGDG~ND~~aLk~A----dVGIamg~g~~~a~~ 619 (847)
+ +.+.+. ..+. . ..+.+|...++.++... +.|+++|||.||.+|++.| ++|||| ++.+.+++
T Consensus 181 l-~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~~lk~ 258 (332)
T 1y8a_A 181 F-RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNEYALK 258 (332)
T ss_dssp H-HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCHHHHT
T ss_pred H-HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCHHHHh
Confidence 1 111100 0011 1 13567988888776543 5699999999999999999 999999 99999999
Q ss_pred ccCEEEcCCChhhHHHHH----HHHHHHHHHHHH-------HHHHHHHHHHHHH
Q 003103 620 ASDIVLTEPGLSVIISAV----LTSRAIFQRMKN-------YTIYAVSITIRIV 662 (847)
Q Consensus 620 aaDivl~~~~~~~i~~~i----~~gR~~~~~i~~-------~i~~~~~~n~~~~ 662 (847)
.||+|+.+++...+..++ ..||..+ ++-+ ++.+..+.|+..+
T Consensus 259 ~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 311 (332)
T 1y8a_A 259 HADVVIISPTAMSEAKVIELFMERKERAF-EVLSAVSIPETEIYIMENSDFGEV 311 (332)
T ss_dssp TCSEEEECSSTHHHHHHHHHHHHHGGGGG-GGGGGCCCTTCEEEEGGGSCHHHH
T ss_pred hCcEEecCCCCCHHHHHHHHHHHcCCchh-HHHHhhccCCCceEEecCCCHHHH
Confidence 999999988887776654 5577777 5555 4444445555443
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.83 E-value=5.1e-09 Score=117.71 Aligned_cols=137 Identities=20% Similarity=0.222 Sum_probs=106.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEe---
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV--- 569 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~--- 569 (847)
+++|++.+.++.|++.|+++.++||.....+..+++++|+.......-.+. +..+.++.
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~------------------dg~~tg~~~~~ 317 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIV------------------DGTLTGRVVGP 317 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEE------------------TTEEEEEECSS
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEe------------------CCEEEeeEccC
Confidence 689999999999999999999999999999999999999853110000000 00011121
Q ss_pred --ChhhHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHHHHHH
Q 003103 570 --FPEHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAI 643 (847)
Q Consensus 570 --sP~qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~gR~~ 643 (847)
.++.|.++++.+.++ | ..+.|+||+.||.+|++.|++|+++ ++.+..++.||.++..+++..+..++..+|.-
T Consensus 318 v~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~-~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~ 396 (415)
T 3p96_A 318 IIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF-NAKPALREVADASLSHPYLDTVLFLLGVTRGE 396 (415)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHH
T ss_pred CCCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE-CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHH
Confidence 266777777766544 3 4688999999999999999999999 67788888999999999999999999888876
Q ss_pred HHHHH
Q 003103 644 FQRMK 648 (847)
Q Consensus 644 ~~~i~ 648 (847)
+.+.-
T Consensus 397 ~~~~~ 401 (415)
T 3p96_A 397 IEAAD 401 (415)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 65543
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.79 E-value=8.5e-09 Score=104.18 Aligned_cols=129 Identities=20% Similarity=0.217 Sum_probs=95.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE---
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--- 568 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar--- 568 (847)
-+++|++.+.++.|++.|+++.++|+.....+..+.+.+|+..... ..+. .+. ..+-.+
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~--~~~~-~~~---------------~~~~~~~~~ 135 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFS--NTLI-VEN---------------DALNGLVTG 135 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEE--EEEE-EET---------------TEEEEEEEE
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhcc--ceeE-EeC---------------CEEEeeecc
Confidence 4578999999999999999999999999999999999999853110 0000 000 000001
Q ss_pred --eChhhHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHH
Q 003103 569 --VFPEHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 639 (847)
Q Consensus 569 --~sP~qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~ 639 (847)
..+..|.+.++.+.++ | ..+.|+||+.||.+|++.|+++++| ++.+..++.||+++.++++..+..++.+
T Consensus 136 ~~~~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~~~~l~~~ad~v~~~~dl~~~~~~~~~ 211 (217)
T 3m1y_A 136 HMMFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHCINEPDLALIKPLIEG 211 (217)
T ss_dssp SCCSTTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-SCCHHHHTTCSEEECSSBGGGGTTC---
T ss_pred CCCCCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-CccHHHHHhcceeecccCHHHHHHHhcc
Confidence 1245666666655443 3 4588999999999999999999999 6778888999999999999999887764
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.73 E-value=4.1e-08 Score=103.75 Aligned_cols=72 Identities=24% Similarity=0.311 Sum_probs=60.3
Q ss_pred EeChh--hHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHH
Q 003103 568 GVFPE--HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 639 (847)
Q Consensus 568 r~sP~--qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~ 639 (847)
...|. .|...++.+.++ | ..|+++||+.||.+|++.|++|+|||++.+..|++||+|+.+++-.++.++|+.
T Consensus 190 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 4dw8_A 190 ELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADYITLTNDEDGVAEAIER 267 (279)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred EEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHHH
Confidence 44454 777777766554 3 358999999999999999999999999999999999999988888888888753
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.71 E-value=1.2e-08 Score=110.04 Aligned_cols=127 Identities=17% Similarity=0.171 Sum_probs=94.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE----
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG---- 568 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar---- 568 (847)
+++|++.+.++.|++.|+++.++||.....+..+.+++|+..... ..+...+ ...-.+
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~--~~l~~~d----------------g~~tg~i~~~ 240 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFS--NTVEIRD----------------NVLTDNITLP 240 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEE--ECEEEET----------------TEEEEEECSS
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEE--EEEEeeC----------------CeeeeeEecc
Confidence 478999999999999999999999999999999999999853110 0000000 000011
Q ss_pred -eChhhHHHHHHHHhhc----CCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 569 -VFPEHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 569 -~sP~qK~~iV~~lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
..++.|.++++.+.++ ...+.|+||+.||.+|++.|++|+++ ++.+..++.||.++..+++..+..+++
T Consensus 241 ~~~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 241 IMNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred cCCCCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 1345666666555432 34689999999999999999999999 466777889999998889998877654
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=3.1e-08 Score=98.39 Aligned_cols=106 Identities=25% Similarity=0.325 Sum_probs=83.3
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHHH
Q 003103 501 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKR 580 (847)
Q Consensus 501 ~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~ 580 (847)
+++.|+++|+++.++||++...+..+.+++|+.. +|.. ...|...++.
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~------------------------------~~~~--~kpk~~~~~~ 108 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITH------------------------------LYQG--QSNKLIAFSD 108 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE------------------------------EECS--CSCSHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce------------------------------eecC--CCCCHHHHHH
Confidence 8999999999999999999999999999999852 1221 2334555554
Q ss_pred Hhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHH-HHHH
Q 003103 581 LQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII-SAVL 638 (847)
Q Consensus 581 lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~-~~i~ 638 (847)
+.++ | ..++|+||+.||.+|++.|+++++++++.+..++.||+++.+.+-..++ ++++
T Consensus 109 ~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 109 LLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp HHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEecCcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 4333 4 5689999999999999999999999887777888999999877555555 5443
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.66 E-value=1.7e-08 Score=100.26 Aligned_cols=119 Identities=21% Similarity=0.234 Sum_probs=89.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
+++|++.+.++.|++.|+++.++|++....+..+ +.+|+... . ..+... +. ..--....|.
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~--~~~~~~-------~~--------~~~~~~~~~~ 139 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-A--NRAIFE-------DG--------KFQGIRLRFR 139 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-E--EEEEEE-------TT--------EEEEEECCSS
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-e--eeEEee-------CC--------ceECCcCCcc
Confidence 7899999999999999999999999988877777 77776321 0 000000 00 0001355678
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
+|...++.+ ....+.|+||+.||.+|++.|++|++|+++.+ .||+++ +++..+.+.++
T Consensus 140 ~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~~~~~----~ad~v~--~~~~el~~~l~ 197 (201)
T 4ap9_A 140 DKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVGREIP----GADLLV--KDLKELVDFIK 197 (201)
T ss_dssp CHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEESSCCT----TCSEEE--SSHHHHHHHHH
T ss_pred CHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEECCCCc----cccEEE--ccHHHHHHHHH
Confidence 899999988 45568899999999999999999999997765 899998 56777766654
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.65 E-value=9.5e-08 Score=101.55 Aligned_cols=68 Identities=15% Similarity=0.143 Sum_probs=58.4
Q ss_pred hhHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHH
Q 003103 572 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 639 (847)
Q Consensus 572 ~qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~ 639 (847)
..|..-++.+.++ | ..|+++||+.||.+|++.|++|+||+++.+..++.||+|+.+++-.++.++|+.
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMKE 272 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHHhcCEECCCCCccHHHHHHHH
Confidence 4587777776554 3 358999999999999999999999999999999999999988888888888863
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=3.8e-08 Score=98.58 Aligned_cols=128 Identities=23% Similarity=0.334 Sum_probs=88.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE-eCh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VFP 571 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar-~sP 571 (847)
++.|++.++++.|++.|+++.++||+....+..+.+++|+... .......... ..+. .+... +.+
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~----------~~~~~~~~~ 141 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYA-FANRLIVKDG---KLTG----------DVEGEVLKE 141 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEE-EEEEEEEETT---EEEE----------EEECSSCST
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeE-EEeeeEEECC---EEcC----------CcccCccCC
Confidence 4678999999999999999999999998888888888887421 0000000000 0000 00000 124
Q ss_pred hhHHHHHHHHhh-cC---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHH
Q 003103 572 EHKYEIVKRLQE-RK---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIIS 635 (847)
Q Consensus 572 ~qK~~iV~~lq~-~g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~ 635 (847)
..|...++.+.+ .| ..+.++||+.||.+|++.|+++++|+ +.+..++.||+++.++++..+..
T Consensus 142 ~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~-~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 142 NAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC-AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp THHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES-CCHHHHTTCSEEECSSCGGGGGG
T ss_pred ccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC-CCHHHHhhcceeecchhHHHHHH
Confidence 577666655443 34 34899999999999999999999998 55667888999997767877654
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.60 E-value=1e-07 Score=91.94 Aligned_cols=110 Identities=20% Similarity=0.272 Sum_probs=84.5
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh--h
Q 003103 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP--E 572 (847)
Q Consensus 495 r~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP--~ 572 (847)
.+++.++++.|++.|+++.++||.+...+..+.+++|+.. .|....| +
T Consensus 38 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~------------------------------~~~~~kp~~~ 87 (162)
T 2p9j_A 38 NVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE------------------------------IYTGSYKKLE 87 (162)
T ss_dssp EHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE------------------------------EEECC--CHH
T ss_pred cccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh------------------------------hccCCCCCHH
Confidence 5678899999999999999999999999999999999842 1222122 2
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII 634 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~ 634 (847)
--..+.+.+.-....+.|+||+.||.+|.+.|+++++++++.+..++.||+++.+.+-..++
T Consensus 88 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~~~~~~~~~~a~~v~~~~~~~g~~ 149 (162)
T 2p9j_A 88 IYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQRNGGEGAL 149 (162)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECSSCSSSSHH
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEecCccHHHHhhCCEEecCCCCCcHH
Confidence 22223333332345689999999999999999999999877888888999999877766665
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.59 E-value=9.6e-08 Score=100.90 Aligned_cols=66 Identities=23% Similarity=0.259 Sum_probs=47.0
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
.|..-++.+.+. | ..|.++||+.||.+|++.|++|+|||+|.+..|++||+|..+++-.++.++|+
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQAVTLTNAENGVAAAIR 266 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHCSCBC------CHHHHHC
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhcceeccCCCccHHHHHHH
Confidence 488777776654 3 35899999999999999999999999999999999999998888888887774
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.56 E-value=1.8e-07 Score=99.32 Aligned_cols=147 Identities=18% Similarity=0.180 Sum_probs=100.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC----------CCCcc-------------cC---c
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY----------PSSSL-------------LG---Q 545 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~----------~~~~~-------------~~---~ 545 (847)
..+-+.+.++|+++++.|+++++.||.....+..+.+++|+..... ....+ .. .
T Consensus 37 ~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i~~~~~~~l~~~~l~~~~~~~i~~~~~~ 116 (285)
T 3pgv_A 37 HFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARVHDSDGQQIFAHNLDRDIAADLFEIVRN 116 (285)
T ss_dssp SCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEEECTTSCEEEECCCCHHHHHHHTTTTTT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEEECCCCCEEEecCCCHHHHHHHHHHHhh
Confidence 3567889999999999999999999999999999999999852100 00000 00 0
Q ss_pred cc------------------------------------ccc-------------CCcchHHHH---HH-h----cC----
Q 003103 546 DK------------------------------------DAS-------------IAALPVDEL---IE-K----AD---- 564 (847)
Q Consensus 546 ~~------------------------------------~~~-------------~~~~~~~~~---~~-~----~~---- 564 (847)
.. ... .+.+.++++ +. . ..
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s 196 (285)
T 3pgv_A 117 DPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSFS 196 (285)
T ss_dssp CTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEECSCHHHHHHHHHHHHHHHGGGEEEEES
T ss_pred cCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeCCCHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 00 000 011111111 11 1 11
Q ss_pred --eEEEeCh--hhHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCE--EEcCCChhhHH
Q 003103 565 --GFAGVFP--EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI--VLTEPGLSVII 634 (847)
Q Consensus 565 --v~ar~sP--~qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDi--vl~~~~~~~i~ 634 (847)
.+..+.| ..|..-++.+.+. | ..|+++||+.||.+|++.|++|+|||+|.+..|++||. +..+++-.++.
T Consensus 197 ~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~~A~~~~v~~sn~edGva 276 (285)
T 3pgv_A 197 TLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHPELEVIGSNADDAVP 276 (285)
T ss_dssp STTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCTTSEECCCGGGTHHH
T ss_pred CCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHHhCCCCEecccCCcchHH
Confidence 1233444 4588888777654 3 35899999999999999999999999999999999984 66677777888
Q ss_pred HHHH
Q 003103 635 SAVL 638 (847)
Q Consensus 635 ~~i~ 638 (847)
++|+
T Consensus 277 ~~i~ 280 (285)
T 3pgv_A 277 RYLR 280 (285)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7775
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.55 E-value=1.2e-07 Score=99.56 Aligned_cols=68 Identities=25% Similarity=0.277 Sum_probs=58.0
Q ss_pred hhHHHHHHHHhhc----CCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHH
Q 003103 572 EHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 639 (847)
Q Consensus 572 ~qK~~iV~~lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~ 639 (847)
..|..-++.+.++ ...+.++||+.||.+|++.|++|++||++.+..+++||+|..+++-.++.++|+.
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 3587777666543 3458999999999999999999999999999999999999988888888888763
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.54 E-value=3e-07 Score=95.89 Aligned_cols=66 Identities=23% Similarity=0.267 Sum_probs=55.5
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
.|..-++.+.+. | ..|+++||+.||.+|++.|++|+|||++.+..|+.||+|..+++-.++.++|+
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~~~~~dGva~~i~ 252 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVADFVTKPVDKEGIWYGLK 252 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCCHHHHHTCSEEECCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCcHHHHHhCCEEeCCCCcchHHHHHH
Confidence 455556655543 2 45899999999999999999999999999999999999998888888888875
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.54 E-value=2.3e-07 Score=95.26 Aligned_cols=147 Identities=22% Similarity=0.245 Sum_probs=101.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCC-CC-cc-c-Ccc------------------cc-
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP-SS-SL-L-GQD------------------KD- 548 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~-~~-~~-~-~~~------------------~~- 548 (847)
..+.+.+.++++++++.|+++.++||.....+..+.+.+|+...... .. .+ . +.. ..
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~ 98 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 98 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCC
Confidence 34678899999999999999999999999999999999997531110 00 00 0 000 00
Q ss_pred -c------------------cCCcchHHHHHHhc----CeE-----EEeCh--hhHHHHHHHHhhc-C---CEEEEEcCC
Q 003103 549 -A------------------SIAALPVDELIEKA----DGF-----AGVFP--EHKYEIVKRLQER-K---HICGMTGDG 594 (847)
Q Consensus 549 -~------------------~~~~~~~~~~~~~~----~v~-----ar~sP--~qK~~iV~~lq~~-g---~~V~miGDG 594 (847)
. ..+.+.+++++++. .+. ....| ..|...++.+.++ | ..|.++||+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~ 178 (231)
T 1wr8_A 99 NARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 178 (231)
T ss_dssp TCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred CceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCC
Confidence 0 00122233333322 222 23333 3688888776653 3 458899999
Q ss_pred cCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 595 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 595 ~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
.||.+|++.|++|++|+++.+..++.||+++.+++-..+.++++
T Consensus 179 ~nD~~~~~~ag~~v~~~~~~~~~~~~a~~v~~~~~e~Gv~~~l~ 222 (231)
T 1wr8_A 179 ENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIY 222 (231)
T ss_dssp GGGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEecCCCHHHHhhCCEEecCCCcchHHHHHH
Confidence 99999999999999999888888889999997776667777765
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.53 E-value=2.3e-07 Score=98.45 Aligned_cols=67 Identities=22% Similarity=0.233 Sum_probs=58.3
Q ss_pred hhHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 572 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 572 ~qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
..|..-++.+.+. | ..|+++||+.||.+|++.|++|+|||+|.+..|++||+|..+++-..+.++|+
T Consensus 210 ~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 210 VSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHHhcCeECCCCCCChHHHHHH
Confidence 3588888777654 3 35899999999999999999999999999999999999999888888888775
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.51 E-value=8.7e-08 Score=100.58 Aligned_cols=68 Identities=28% Similarity=0.337 Sum_probs=58.4
Q ss_pred hhHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHH
Q 003103 572 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 639 (847)
Q Consensus 572 ~qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~ 639 (847)
..|..-++.+.++ | ..|.++||+.||.+|++.|++|+|||++.+.+|++||+|..+++-.++.++|+.
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 3677777766554 3 358999999999999999999999999999999999999998888899888763
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.50 E-value=6.5e-07 Score=89.64 Aligned_cols=127 Identities=15% Similarity=0.117 Sum_probs=94.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEE--EeC
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA--GVF 570 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a--r~s 570 (847)
++.|++.+.++.|++. +++.++|+.....+..+.+++|+..... .....+.+ ...-. .-.
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~-~~~~~~~~----------------~~~~~~~~p~ 130 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLC-HKLEIDDS----------------DRVVGYQLRQ 130 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEE-EEEEECTT----------------SCEEEEECCS
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceec-ceeEEcCC----------------ceEEeeecCC
Confidence 5789999999999999 9999999999999999999999853110 00000000 00001 256
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 571 P~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
|+.|...++.+......+.|+||+.||.+|.+.|++++++....+....+++++. -+++..+...+.
T Consensus 131 p~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~ 197 (206)
T 1rku_A 131 KDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPA-VHTYEDLKREFL 197 (206)
T ss_dssp SSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCE-ECSHHHHHHHHH
T ss_pred CchHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEECCcHHHHHHHhhhcc-ccchHHHHHHHH
Confidence 8899999999988888999999999999999999999998644444444556542 267888877663
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.44 E-value=2.6e-07 Score=92.81 Aligned_cols=130 Identities=12% Similarity=0.082 Sum_probs=88.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC-CCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTN-MYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ..........+. ... .......+|.
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-----~~~~~~~~~~ 150 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDG-------SFK-----ELDNSNGACD 150 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTS-------BEE-----EEECTTSTTT
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCC-------cee-----ccCCCCCCcc
Confidence 789999999999999999999999999999999999998521 110000000000 000 0001223466
Q ss_pred hHHHHHHHH-hhcCCEEEEEcCCcCChhhhhh----cCcceecccccHHHhhccCEEEcCCChhhHHHHH
Q 003103 573 HKYEIVKRL-QERKHICGMTGDGVNDAPALKK----ADIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 573 qK~~iV~~l-q~~g~~V~miGDG~ND~~aLk~----AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i 637 (847)
.|.+.+..+ .-....+.|+||+.||.+|++. +.+|++++++.+..+..||+++ +++..+.+.+
T Consensus 151 ~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~--~~~~el~~~l 218 (219)
T 3kd3_A 151 SKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVA--RNVAELASLI 218 (219)
T ss_dssp CHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEE--SSHHHHHHHH
T ss_pred cHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCccccHHHHhhcceee--CCHHHHHHhh
Confidence 777766554 4456789999999999999965 3444455566777888999998 5677766543
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=8.7e-08 Score=96.02 Aligned_cols=128 Identities=14% Similarity=0.154 Sum_probs=90.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... +...+.+.+. ....-.|+
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f-~~~~i~~~~~-----------------~~~kp~~~ 131 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCF-AEADVLGRDE-----------------APPKPHPG 131 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGS-CGGGEECTTT-----------------SCCTTSSH
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhc-CcceEEeCCC-----------------CCCCCCHH
Confidence 34689999999999999999999999999999999999984321 0011111100 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCc-ceecccccHHHhhccCEEEcCCChhhHHHHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLTEPGLSVIISAVLTS 640 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~g 640 (847)
--..+.+.+.-....+.|+||+.||..|.+.|++ +|+|+++.+..++.||+++ +++..+...+...
T Consensus 132 ~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~--~~~~el~~~~~~~ 198 (205)
T 3m9l_A 132 GLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHA--RDCAQLRDLLSAE 198 (205)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCGGGCSEEC--SSHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCcccccCCEEe--CCHHHHHHHHHhc
Confidence 2233333333333568999999999999999999 9999977777778899998 6788888877653
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.41 E-value=3.8e-07 Score=97.77 Aligned_cols=67 Identities=25% Similarity=0.242 Sum_probs=58.1
Q ss_pred hhHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 572 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 572 ~qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
..|..-++.+.++ | ..|+++||+.||.+|++.|++|+|||++.+..|++||+|+.+++-..+.++|+
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVID 297 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhccEEcCCCCcchHHHHHH
Confidence 4688777777654 3 34899999999999999999999999999999999999998888888888876
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.40 E-value=3.4e-07 Score=93.68 Aligned_cols=129 Identities=19% Similarity=0.239 Sum_probs=90.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
.++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+.+... -...-.|
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~ 163 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRL--TVIAGDDSV-----------------ERGKPHP 163 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTC--SEEECTTTS-----------------SSCTTSS
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhhe--eeEEeCCCC-----------------CCCCCCH
Confidence 346789999999999999999999999999999999999974321 001100000 0011123
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCc---ceeccccc-HHHhh-ccCEEEcCCChhhHHHHHHHHH
Q 003103 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI---GIAVADAT-DAARS-ASDIVLTEPGLSVIISAVLTSR 641 (847)
Q Consensus 572 ~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV---GIamg~g~-~~a~~-aaDivl~~~~~~~i~~~i~~gR 641 (847)
+--..+.+.+.-....+.|+||+.||..|++.|++ +|++|.+. +..++ .||+++ +++..+.+.++.++
T Consensus 164 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~~~~el~~~l~~~~ 236 (237)
T 4ex6_A 164 DMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVV--DSFPAAVTAVLDGH 236 (237)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEE--SSHHHHHHHHHHC-
T ss_pred HHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEE--CCHHHHHHHHHccC
Confidence 33334444444444568999999999999999999 99998443 44444 799998 67999988887653
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.32 E-value=1.9e-06 Score=91.17 Aligned_cols=71 Identities=21% Similarity=0.218 Sum_probs=59.1
Q ss_pred EeChh--hHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 568 GVFPE--HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 568 r~sP~--qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
.+.|. .|...++.+.+. | ..+.++||+.||.+|++.|++|++|+++.+..++.||+++.+++-..+.++|+
T Consensus 191 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~ 267 (282)
T 1rkq_A 191 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 267 (282)
T ss_dssp EEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred EecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcHHHHhhCCEEecCCCcchHHHHHH
Confidence 34444 788888877654 3 35899999999999999999999999988889999999998877778887775
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.28 E-value=9.7e-07 Score=89.69 Aligned_cols=128 Identities=17% Similarity=0.187 Sum_probs=86.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC-CCCCCCcccCccccccCCcchHHHHHHhcCeEEE--
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-- 568 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar-- 568 (847)
-++.|++.++++.|++.|+++.++|+.....+..+.+++|+.. +......... . ...+.+.
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~--~--------------~~~~~~~~~ 148 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFY--F--------------NGEYAGFDE 148 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEEC--T--------------TSCEEEECT
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEc--C--------------CCcEecCCC
Confidence 3678999999999999999999999999999999999999852 1110000000 0 0001111
Q ss_pred ----eChhhHHHHHHHHhhc-C-CEEEEEcCCcCChhhhhhcCcceecccc--cHHHhhccCEEEcCCChhhHHHHH
Q 003103 569 ----VFPEHKYEIVKRLQER-K-HICGMTGDGVNDAPALKKADIGIAVADA--TDAARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 569 ----~sP~qK~~iV~~lq~~-g-~~V~miGDG~ND~~aLk~AdVGIamg~g--~~~a~~aaDivl~~~~~~~i~~~i 637 (847)
+.+..|-.+++.+.++ | ..+.|+||+.||..|.++|+++|+++.+ .+.....+|+++ +++..+...+
T Consensus 149 ~~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 223 (225)
T 1nnl_A 149 TQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYI--TDFVELLGEL 223 (225)
T ss_dssp TSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEE--SCGGGGCC--
T ss_pred CCcccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeee--cCHHHHHHHH
Confidence 1123666666655443 4 5688999999999999999998888732 234445689988 5576665544
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.23 E-value=3.2e-06 Score=86.15 Aligned_cols=106 Identities=17% Similarity=0.146 Sum_probs=76.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE----
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG---- 568 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar---- 568 (847)
+++|++.+.++.|++.|+++.++||.....+..+++.+|+..- ......... .....+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~-~~~~~~~~~-----------------~~~~g~~~~~ 153 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHL-IATDPEYRD-----------------GRYTGRIEGT 153 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEE-EECEEEEET-----------------TEEEEEEESS
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEE-EEcceEEEC-----------------CEEeeeecCC
Confidence 4799999999999999999999999999999999999998521 000000000 000111
Q ss_pred -eChhhHHHHHHHHh-hcC------CEEEEEcCCcCChhhhhhcCcceecccccHH
Q 003103 569 -VFPEHKYEIVKRLQ-ERK------HICGMTGDGVNDAPALKKADIGIAVADATDA 616 (847)
Q Consensus 569 -~sP~qK~~iV~~lq-~~g------~~V~miGDG~ND~~aLk~AdVGIamg~g~~~ 616 (847)
..+..|.+.++.+. +.| ..+.|+||+.||.+|++.|++++++......
T Consensus 154 ~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~~~l 209 (232)
T 3fvv_A 154 PSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPGL 209 (232)
T ss_dssp CSSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESCCHHH
T ss_pred CCcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECcCHHH
Confidence 22467777665543 345 5799999999999999999999999644333
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.18 E-value=2.4e-06 Score=86.48 Aligned_cols=121 Identities=10% Similarity=0.138 Sum_probs=87.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeC-
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF- 570 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~s- 570 (847)
-++.|++.+.++.|++.|+++.++|+.....+..+.+..|+.... ..+ +.+...
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f---~~~----------------------~~~~~~~ 139 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYF---DAI----------------------VGSSLDG 139 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGC---SEE----------------------EEECTTS
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhe---eee----------------------eccCCCC
Confidence 457899999999999999999999999998899999999875311 000 011111
Q ss_pred -hhhHHHH----HHHHhhcCCEEEEEcCCcCChhhhhhcCc---ceecccccHH--HhhccCEEEcCCChhhHHHHHHH
Q 003103 571 -PEHKYEI----VKRLQERKHICGMTGDGVNDAPALKKADI---GIAVADATDA--ARSASDIVLTEPGLSVIISAVLT 639 (847)
Q Consensus 571 -P~qK~~i----V~~lq~~g~~V~miGDG~ND~~aLk~AdV---GIamg~g~~~--a~~aaDivl~~~~~~~i~~~i~~ 639 (847)
+..|... .+.+.-....+.++||+.||..|.+.|++ ++++|.+... .+..||+++ +++..+.+.+..
T Consensus 140 ~~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~s~~el~~~~~~ 216 (226)
T 3mc1_A 140 KLSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIV--NSVDELHKKILE 216 (226)
T ss_dssp SSCSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEE--SSHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEE--CCHHHHHHHHHH
Confidence 1223333 33333333568999999999999999999 8888854433 357899998 678888877754
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.17 E-value=5.3e-07 Score=99.43 Aligned_cols=108 Identities=13% Similarity=0.142 Sum_probs=75.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE---
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--- 568 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar--- 568 (847)
..++|++++.|+.||++|++|+++||.....++.+|+++|+..+. +...+.|.......+ -..-.+
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~i-p~~~Vig~~l~~~~d----------G~~tg~~~~ 288 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKM-KEEKVLGLRLMKDDE----------GKILPKFDK 288 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCC-CGGGEEEECEEECTT----------CCEEEEECT
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCC-CcceEEEeEEEEecC----------CceeeeecC
Confidence 457899999999999999999999999999999999999875332 222222221110000 011122
Q ss_pred ----eChhhHHHHHHHHhhc--C-CEEEEEcCCcCChhhhhh-cCcceec
Q 003103 569 ----VFPEHKYEIVKRLQER--K-HICGMTGDGVNDAPALKK-ADIGIAV 610 (847)
Q Consensus 569 ----~sP~qK~~iV~~lq~~--g-~~V~miGDG~ND~~aLk~-AdVGIam 610 (847)
+..+.|...++.+-+. | ..+.++|||.||.+||++ +|.++++
T Consensus 289 ~~p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~l 338 (385)
T 4gxt_A 289 DFPISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSL 338 (385)
T ss_dssp TSCCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEE
T ss_pred ccceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEE
Confidence 2356799999876432 2 347788999999999986 6766665
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.14 E-value=3.7e-06 Score=87.68 Aligned_cols=127 Identities=13% Similarity=0.129 Sum_probs=85.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.+++.+.++.|++.|+++.++|++....+..+.+.+|+..... ...+.+.... ...-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~-----------------~~kp~~~ 164 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKP-DFLVTPDDVP-----------------AGRPYPW 164 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCC-SCCBCGGGSS-----------------CCTTSSH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccCh-HheecCCccC-----------------CCCCCHH
Confidence 467899999999999999999999999888888888877643210 1111110000 0111233
Q ss_pred hHHHHHHHHhhcC-CEEEEEcCCcCChhhhhhcC---cceecccc------------------------cHHHhhc-cCE
Q 003103 573 HKYEIVKRLQERK-HICGMTGDGVNDAPALKKAD---IGIAVADA------------------------TDAARSA-SDI 623 (847)
Q Consensus 573 qK~~iV~~lq~~g-~~V~miGDG~ND~~aLk~Ad---VGIamg~g------------------------~~~a~~a-aDi 623 (847)
--..+.+.+.-.. ..+.|+||+.||..|++.|+ +++++|++ .+..++. ||+
T Consensus 165 ~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 244 (267)
T 1swv_A 165 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHF 244 (267)
T ss_dssp HHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCce
Confidence 3344455554334 56899999999999999999 67777754 2333334 999
Q ss_pred EEcCCChhhHHHHHHH
Q 003103 624 VLTEPGLSVIISAVLT 639 (847)
Q Consensus 624 vl~~~~~~~i~~~i~~ 639 (847)
++ +++..+...+..
T Consensus 245 v~--~~~~el~~~l~~ 258 (267)
T 1swv_A 245 TI--ETMQELESVMEH 258 (267)
T ss_dssp EE--SSGGGHHHHHHH
T ss_pred ec--cCHHHHHHHHHH
Confidence 98 678888777643
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=8.4e-06 Score=84.97 Aligned_cols=64 Identities=23% Similarity=0.291 Sum_probs=53.3
Q ss_pred hhHHHHHHHHhhc-C-----CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 572 EHKYEIVKRLQER-K-----HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 572 ~qK~~iV~~lq~~-g-----~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
..|..-++.+.++ | ..++++||+.||.+|++.|++|++|+++.+ . +++++..+++-..+.++++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~--~~~~~~~~~~~~gv~~~~~ 244 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP-P--EGVLATPAPGPEGFRYAVE 244 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC-C--TTCEECSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh-c--CCcEEeCCCCchHHHHHHH
Confidence 5788888877655 3 569999999999999999999999998888 3 7889888777777777665
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.08 E-value=4e-06 Score=85.07 Aligned_cols=126 Identities=12% Similarity=0.092 Sum_probs=85.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.+++.+.++.|++.|+++.++|+.....+....+..|+.... ...+.+.... ...-.|+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 151 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINK--INIVTRDDVS-----------------YGKPDPD 151 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTS--SCEECGGGSS-----------------CCTTSTH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhh--heeeccccCC-----------------CCCCChH
Confidence 45789999999999999999999999999899999988885421 0111100000 0011122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCc---ceecc-cccHHHhhc-cCEEEcCCChhhHHHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI---GIAVA-DATDAARSA-SDIVLTEPGLSVIISAVLT 639 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV---GIamg-~g~~~a~~a-aDivl~~~~~~~i~~~i~~ 639 (847)
--..+.+.+.-....+.++||+.||..|++.|++ ++++| +..+..++. ||+++ +++..+.+.++.
T Consensus 152 ~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~--~~~~el~~~l~~ 221 (233)
T 3s6j_A 152 LFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVY--EDPLDLLNHLDE 221 (233)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEE--SSHHHHHHTGGG
T ss_pred HHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEE--CCHHHHHHHHHH
Confidence 2222333333223458999999999999999999 77776 444444444 99998 678888887754
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.08 E-value=3.2e-06 Score=85.15 Aligned_cols=122 Identities=15% Similarity=0.172 Sum_probs=82.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.+++.+.++.|++.|+++.++|+..........+.+|+.... ...+...... ...-.|+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~-----------------~~kp~~~ 154 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF--DALASAEKLP-----------------YSKPHPQ 154 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEECTTSS-----------------CCTTSTH
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhC--cEEEeccccC-----------------CCCCChH
Confidence 45789999999999999999999999988888888888874211 0000000000 0011133
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceec----ccccHHHhhccCEEEcCCChhhHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARSASDIVLTEPGLSVIIS 635 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIam----g~g~~~a~~aaDivl~~~~~~~i~~ 635 (847)
--..+.+.+.-....+.++||+.||.+|++.|++++++ +++.+..+..||+++ +++..+..
T Consensus 155 ~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~--~~~~el~~ 219 (226)
T 1te2_A 155 VYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKL--SSLTELTA 219 (226)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEEC--SCGGGCCH
T ss_pred HHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEE--CCHHHHhH
Confidence 33344444443345688999999999999999999998 444445677899998 44555544
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.00 E-value=3.9e-06 Score=84.45 Aligned_cols=122 Identities=16% Similarity=0.105 Sum_probs=77.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh--
Q 003103 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP-- 571 (847)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP-- 571 (847)
+.+++.+.++.|++.|+++.++|++.........+..|+.... ..+...+. ...-.|
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~---~~~~~~~~------------------~~~~k~~~ 148 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWF---DIIIGGED------------------VTHHKPDP 148 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCC---SEEECGGG------------------CSSCTTST
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhhe---eeeeehhh------------------cCCCCCCh
Confidence 3689999999999999999999999988888888888874321 00100000 000112
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceec----ccccHHHhhc-cCEEEcCCChhhHHHHHH
Q 003103 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARSA-SDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 572 ~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIam----g~g~~~a~~a-aDivl~~~~~~~i~~~i~ 638 (847)
+--..+.+.+.-....+.++||+.||.+|++.|++++++ +++.+..+.. ||+++ +++..+.+.++
T Consensus 149 ~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~--~~~~el~~~l~ 218 (225)
T 3d6j_A 149 EGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRII--STLGQLISVPE 218 (225)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEE--SSGGGGC----
T ss_pred HHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEE--CCHHHHHHhhh
Confidence 212233333332334588999999999999999998887 3333334444 89988 45666655553
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.99 E-value=3.9e-06 Score=86.14 Aligned_cols=138 Identities=14% Similarity=0.053 Sum_probs=89.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHH--HhcCeEEEe
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELI--EKADGFAGV 569 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~ar~ 569 (847)
-+++|++.++++.|+++|+++.++|+.....+..+.+ |+... ..+.+.+... .+..+.... ..-..+-+-
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~----~~v~~~~~~~--~~~~~~~~~~kp~p~~~~~~ 147 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK----DRIYCNHASF--DNDYIHIDWPHSCKGTCSNQ 147 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG----GGEEEEEEEC--SSSBCEEECTTCCCTTCCSC
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC----CeEEeeeeEE--cCCceEEecCCCCccccccc
Confidence 3578999999999999999999999999888888877 66321 1111111100 000000000 000000111
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhc--cCEEEcCCChhhHHHHHHH
Q 003103 570 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSA--SDIVLTEPGLSVIISAVLT 639 (847)
Q Consensus 570 sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~a--aDivl~~~~~~~i~~~i~~ 639 (847)
...+|.+.++.+......+.|+||+.||.+|.+.|++.++.....+...+. +|+++ +++..+...+..
T Consensus 148 ~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~~ 217 (236)
T 2fea_A 148 CGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPY--QDFYEIRKEIEN 217 (236)
T ss_dssp CSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECC--SSHHHHHHHHHT
T ss_pred cCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeechHHHHHHHHCCCCeeec--CCHHHHHHHHHH
Confidence 245788899988877788999999999999999999988753222223333 77776 678888877754
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.99 E-value=5.6e-06 Score=84.75 Aligned_cols=119 Identities=14% Similarity=0.126 Sum_probs=83.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeC-
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF- 570 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~s- 570 (847)
.++.|++.+.++.|++.|+++.++|+.....+..+.+++|+.... + .+ +.+...
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f-~--~~----------------------~~~~~~~ 163 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYF-K--YI----------------------AGSNLDG 163 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC-S--EE----------------------EEECTTS
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhE-E--EE----------------------EeccccC
Confidence 346899999999999999999999999999899999999985311 0 00 011111
Q ss_pred -hhhHHH----HHHHHhhc-CCEEEEEcCCcCChhhhhhcCc---ceecccccHH--HhhccCEEEcCCChhhHHHHH
Q 003103 571 -PEHKYE----IVKRLQER-KHICGMTGDGVNDAPALKKADI---GIAVADATDA--ARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 571 -P~qK~~----iV~~lq~~-g~~V~miGDG~ND~~aLk~AdV---GIamg~g~~~--a~~aaDivl~~~~~~~i~~~i 637 (847)
+..|.. +.+.+.-. ...+.++||+.||..|.+.|++ ++++|.+... .+..||+++ +++..+.+.|
T Consensus 164 ~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~~~~el~~~l 239 (240)
T 3sd7_A 164 TRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIV--ENVESIKDIL 239 (240)
T ss_dssp CCCCHHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEE--SSSTTHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEE--CCHHHHHHHh
Confidence 112333 33333333 4568999999999999999999 7777754433 357899998 5677776654
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.99 E-value=3.4e-06 Score=86.94 Aligned_cols=123 Identities=16% Similarity=0.134 Sum_probs=82.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
.++.|++.+.++.|++.|+++.++|+.....+..+.+++|+.... . ..+.+.... ...-.|
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f-~-~~~~~~~~~-----------------~~Kp~~ 173 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF-S-EMLGGQSLP-----------------EIKPHP 173 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC-S-EEECTTTSS-----------------SCTTSS
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheE-E-EEEecccCC-----------------CCCcCH
Confidence 356789999999999999999999999999999999999985311 0 011000000 001123
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCccee-ccc----ccHHHhhccCEEEcCCChhhHHH
Q 003103 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-VAD----ATDAARSASDIVLTEPGLSVIIS 635 (847)
Q Consensus 572 ~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIa-mg~----g~~~a~~aaDivl~~~~~~~i~~ 635 (847)
+--..+.+.+.-....+.|+||+.||.+|.+.|+++.. +.. +.+..+..+|+++ +++..+.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi--~~~~el~~ 240 (243)
T 2hsz_A 174 APFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADILK 240 (243)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGGG
T ss_pred HHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEE--CCHHHHHH
Confidence 33344445554444568999999999999999998844 332 3344567899998 55666544
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.99 E-value=9e-06 Score=82.63 Aligned_cols=113 Identities=12% Similarity=0.113 Sum_probs=72.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|++.|+++.++|+... +..+.+++|+..... .+.+.+ +. -...-.|+
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~---~i~~~~--------~~--------~~~Kp~~~ 150 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFH---AIVDPT--------TL--------AKGKPDPD 150 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCS---EECCC-------------------------CC
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcC---EEeeHh--------hC--------CCCCCChH
Confidence 3688999999999999999999999754 667778888753210 010000 00 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcC
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~ 627 (847)
-=..+.+.+.-....+.|+||+.||..|.+.|+++++|.++.+..+ .||+++.+
T Consensus 151 ~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~~~-~ad~v~~s 204 (233)
T 3nas_A 151 IFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQPML-GADLVVRQ 204 (233)
T ss_dssp HHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC--------CSEECSS
T ss_pred HHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCccccc-cCCEEeCC
Confidence 2234445554444568999999999999999999999986655555 89999844
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.98 E-value=1.9e-05 Score=83.07 Aligned_cols=66 Identities=18% Similarity=0.116 Sum_probs=33.6
Q ss_pred hHHHHHHHHhhc-C----CE--EEEEcCCcCChhhhhhcCcceeccccc---HHHhhc--cC-EEEcCCChhhHHHHHH
Q 003103 573 HKYEIVKRLQER-K----HI--CGMTGDGVNDAPALKKADIGIAVADAT---DAARSA--SD-IVLTEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV~~lq~~-g----~~--V~miGDG~ND~~aLk~AdVGIamg~g~---~~a~~a--aD-ivl~~~~~~~i~~~i~ 638 (847)
.|..-++.+.+. | .. +.++||+.||.+|++.|++||+|+++. +..++. || ++..+++-..+.++|+
T Consensus 189 ~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l~ 267 (275)
T 1xvi_A 189 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLD 267 (275)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECCCCC------------------------------
T ss_pred CHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEecCCCccchhhccccCCceeEccCCCchHHHHHHH
Confidence 576666555432 3 34 899999999999999999999999886 455543 78 8887777777777765
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=97.98 E-value=5.2e-06 Score=83.42 Aligned_cols=114 Identities=5% Similarity=-0.038 Sum_probs=75.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.+++.+.++.|++.|+++.++|++ ..+..+.+.+|+.... + ..+.+.... ...-.|+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f-~-~~~~~~~~~-----------------~~Kp~~~ 149 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYF-D-AIADPAEVA-----------------ASKPAPD 149 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGC-S-EECCTTTSS-----------------SCTTSSH
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHc-c-eEeccccCC-----------------CCCCChH
Confidence 45789999999999999999999998 3445666777874211 0 001000000 0011122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCC
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP 628 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~ 628 (847)
--..+.+.+.-....+.++||+.||.+|++.|+++++|.++.+..+ .||+++.+.
T Consensus 150 ~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~-~a~~v~~~~ 204 (221)
T 2wf7_A 150 IFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLG-DDIVIVPDT 204 (221)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHHHC-SSSEEESSG
T ss_pred HHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEECCHHHhc-cccchhcCH
Confidence 2233334443334568899999999999999999999987776667 899998543
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.97 E-value=4.7e-06 Score=84.70 Aligned_cols=126 Identities=9% Similarity=0.002 Sum_probs=88.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+..... ..+..... -...-.|+
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~-----------------~~~kp~~~ 159 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFD--HVLSVDAV-----------------RLYKTAPA 159 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCS--EEEEGGGT-----------------TCCTTSHH
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcC--EEEEeccc-----------------CCCCcCHH
Confidence 457899999999999999999999999988888888888853210 01100000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceec----ccccHHHhhccCEEEcCCChhhHHHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARSASDIVLTEPGLSVIISAVLT 639 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIam----g~g~~~a~~aaDivl~~~~~~~i~~~i~~ 639 (847)
--..+.+.+.-....+.|+||+.||..|.+.|++++++ +++.+..+..+|+++ +++..+.+.+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~--~~~~el~~~l~~ 228 (233)
T 3umb_A 160 AYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAG--HDMRDLLQFVQA 228 (233)
T ss_dssp HHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEE--SSHHHHHHHHHC
T ss_pred HHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEE--CCHHHHHHHHHH
Confidence 22334444443345688999999999999999999999 444444566799998 678888887764
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=97.96 E-value=5.5e-06 Score=87.85 Aligned_cols=131 Identities=17% Similarity=0.176 Sum_probs=87.6
Q ss_pred CCCcchHHHHHHHHhC-CCeEEEEcCC---------------------CHHHHHHHHHHcCCCCCCCCCCcccCcccccc
Q 003103 493 PPRHDSAETIRRALNL-GVNVKMITGD---------------------QLAIGKETGRRLGMGTNMYPSSSLLGQDKDAS 550 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~a-GI~v~miTGD---------------------~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~ 550 (847)
.+++++.+.++.+++. |+++.+.|.. ....+..+.++.|+...........+..
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~---- 197 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDP---- 197 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCC----
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCC----
Confidence 4578999999999988 9998888876 2233344444444421100000000000
Q ss_pred CCcchHHHHHHhcCeEEEeCh--hhHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEE
Q 003103 551 IAALPVDELIEKADGFAGVFP--EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624 (847)
Q Consensus 551 ~~~~~~~~~~~~~~v~ar~sP--~qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDiv 624 (847)
....+....| ..|...++.+.++ | ..++|+||+.||.+|++.|++|++|+++.+..++.||++
T Consensus 198 -----------~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~~~a~~v 266 (289)
T 3gyg_A 198 -----------EDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKNLHNLI 266 (289)
T ss_dssp -----------TTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHHHHCCCB
T ss_pred -----------CCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHHHhCCEE
Confidence 0002334444 3677777666543 3 458999999999999999999999999999999999999
Q ss_pred EcCCChhhHHHHHH
Q 003103 625 LTEPGLSVIISAVL 638 (847)
Q Consensus 625 l~~~~~~~i~~~i~ 638 (847)
+.+++-.++.++++
T Consensus 267 ~~~~~~~gv~~~~~ 280 (289)
T 3gyg_A 267 TDSEYSKGITNTLK 280 (289)
T ss_dssp CSSCHHHHHHHHHH
T ss_pred cCCCCcCHHHHHHH
Confidence 98877777877775
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.95 E-value=1.1e-05 Score=81.84 Aligned_cols=125 Identities=15% Similarity=0.105 Sum_probs=84.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
-++.|++.++++.|++.|+++.++|+.....+..+.+++|+.... + ..+.+.+. ....-.|
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f-~-~i~~~~~~-----------------~~~Kp~~ 142 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYF-D-LIVGGDTF-----------------GEKKPSP 142 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC-S-EEECTTSS-----------------CTTCCTT
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHh-e-EEEecCcC-----------------CCCCCCh
Confidence 356899999999999999999999999998888899999974311 0 01110000 0111224
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc-eecc--cccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVA--DATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 572 ~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg--~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
+--..+.+.+.-....+.|+||+.||.+|.+.|++. |++. .+.... ..+|+++ +++..+...+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~--~~~~el~~~l~ 209 (222)
T 2nyv_A 143 TPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTL--SRPSDLVKLMD 209 (222)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEE--SSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEE--CCHHHHHHHHH
Confidence 444445555544445688999999999999999987 5554 222222 5789888 66888877664
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.92 E-value=7.1e-06 Score=83.09 Aligned_cols=125 Identities=11% Similarity=0.061 Sum_probs=84.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+..... ..+..... -...-.|
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~-----------------~~~kp~~ 155 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFD--HLISVDEV-----------------RLFKPHQ 155 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCS--EEEEGGGT-----------------TCCTTCH
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcc--eeEehhhc-----------------ccCCCCh
Confidence 3568899999999999999999999999988888888998743110 00000000 0001112
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceec----ccccHHHhhccCEEEcCCChhhHHHHH
Q 003103 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 572 ~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIam----g~g~~~a~~aaDivl~~~~~~~i~~~i 637 (847)
+--..+.+.+.-....+.++||+.||..|.+.|++++++ +++.+..+..+|+++ +++..+...+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 223 (230)
T 3um9_A 156 KVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVV--SDVGVLASRF 223 (230)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEE--SSHHHHHHTC
T ss_pred HHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEe--CCHHHHHHHH
Confidence 222333344433345688999999999999999999999 334444556899998 6677776654
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.92 E-value=2.4e-05 Score=79.26 Aligned_cols=122 Identities=14% Similarity=0.123 Sum_probs=78.0
Q ss_pred CCCcchHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 493 PPRHDSAETIRRALNL-GVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~a-GI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
++.|++.+.++.|++. |+++.++|+.....+....+.+|+.... + ..+.+.+ +. ..|
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f-~-~~~~~~~------------------~~--~~~ 150 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF-P-FGAFADD------------------AL--DRN 150 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC-S-CEECTTT------------------CS--SGG
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhc-C-cceecCC------------------Cc--Ccc
Confidence 3578999999999999 9999999999998888888888885321 1 0111100 00 011
Q ss_pred hhHHHHHH-HHhhcC-----CEEEEEcCCcCChhhhhhcC---cceecccccHHHh-h-ccCEEEcCCChhhHHHHHH
Q 003103 572 EHKYEIVK-RLQERK-----HICGMTGDGVNDAPALKKAD---IGIAVADATDAAR-S-ASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 572 ~qK~~iV~-~lq~~g-----~~V~miGDG~ND~~aLk~Ad---VGIamg~g~~~a~-~-aaDivl~~~~~~~i~~~i~ 638 (847)
+-+....+ .+++.| ..+.|+||+.||.+|.+.|+ ++++.|.+..... . .+|+++ +++..+...+.
T Consensus 151 k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~--~~~~el~~~l~ 226 (234)
T 2hcf_A 151 ELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF--KNFAETDEVLA 226 (234)
T ss_dssp GHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE--SCSCCHHHHHH
T ss_pred chHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEe--CCHHhHHHHHH
Confidence 12222222 223323 46889999999999999999 5555554333322 2 389988 44556655543
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.91 E-value=5.5e-06 Score=81.90 Aligned_cols=119 Identities=15% Similarity=0.097 Sum_probs=79.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
.+.|++.+.++.|++.|+++.++|++...... ..+..|+.... ..+...+.. -...-.|+
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f---~~~~~~~~~----------------~~~Kp~~~ 144 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYF---TEILTSQSG----------------FVRKPSPE 144 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGE---EEEECGGGC----------------CCCTTSSH
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhe---eeEEecCcC----------------CCCCCCcH
Confidence 45789999999999999999999999888777 77778874210 000000000 00001122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc-eecccccHHHhhccCEEEcCCChhhHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADATDAARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~g~~~a~~aaDivl~~~~~~~i~~~i 637 (847)
--..+.+.+.-....+.++||+.||.+|++.|+++ ++|++|. . .||+++ +++..+.+.+
T Consensus 145 ~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~---~a~~v~--~~~~el~~~l 204 (207)
T 2go7_A 145 AATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y---EGNHRI--QALADISRIF 204 (207)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C---TTEEEC--SSTTHHHHHT
T ss_pred HHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEecCC-C---CCCEEe--CCHHHHHHHH
Confidence 22344444443445688999999999999999997 8888765 2 688887 4566666544
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=97.90 E-value=8.2e-06 Score=84.63 Aligned_cols=55 Identities=24% Similarity=0.207 Sum_probs=45.1
Q ss_pred hhHHHHHHHHhhc-----CCEEEEEcCCcCChhhhhhcCcceeccccc-HHHhhccCEEEc
Q 003103 572 EHKYEIVKRLQER-----KHICGMTGDGVNDAPALKKADIGIAVADAT-DAARSASDIVLT 626 (847)
Q Consensus 572 ~qK~~iV~~lq~~-----g~~V~miGDG~ND~~aLk~AdVGIamg~g~-~~a~~aaDivl~ 626 (847)
..|..-++.+.+. ...|+++||+.||.+||+.|++|++||++. +..++.||+++.
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~ 238 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDV 238 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEec
Confidence 3588877777654 357999999999999999999999999887 667778887763
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.89 E-value=1.3e-05 Score=81.28 Aligned_cols=122 Identities=10% Similarity=0.050 Sum_probs=80.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+.... + ..+.+.+. -...-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f-~-~i~~~~~~-----------------~~~Kp~~~ 163 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYF-D-SIIGSGDT-----------------GTIKPSPE 163 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC-S-EEEEETSS-----------------SCCTTSSH
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhe-e-eEEccccc-----------------CCCCCChH
Confidence 46889999999999999999999999999999999999985311 0 00000000 00011122
Q ss_pred hHHHHHHHHhhcCC-EEEEEcCCcCChhhhhhcCc-ceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 573 HKYEIVKRLQERKH-ICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV~~lq~~g~-~V~miGDG~ND~~aLk~AdV-GIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
--..+.+.+.-... .+.|+||+.||..|.++|++ +|.++++.+ ..+|.++ +++..+.+.+.
T Consensus 164 ~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~---~~~~~~~--~~~~el~~~l~ 226 (231)
T 3kzx_A 164 PVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI---IKDILSF--KNFYDIRNFIC 226 (231)
T ss_dssp HHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEECC--------CCEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC---CCCceee--CCHHHHHHHHH
Confidence 22344444443444 68899999999999999997 666776544 3577777 66888877664
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=4.4e-05 Score=74.86 Aligned_cols=136 Identities=11% Similarity=0.166 Sum_probs=82.7
Q ss_pred CccccCceEEEEEeeeecccCCChHHHHHHHHHhccccCcchHHHHHHHhcCChHHH--hccceEEEeecCCCCCcceEE
Q 003103 337 GTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEA--RAGVREVHFLPFNPVDKRTAL 414 (847)
Q Consensus 337 GTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~--~~~~~~~~~~pf~s~~k~~~v 414 (847)
||||+|+++|.++.......+.+.++++.+++.++..+. ||+..|+++++.+.... .......+..|- +-...
T Consensus 1 GTLT~G~p~V~~v~~~~~~~~~~~~~lL~laaa~E~~Se-HPlA~AIv~~a~~~~~~~~~~~~~~f~~i~G----~Gv~~ 75 (185)
T 2kmv_A 1 SFTMHGTPVVNQVKVLTESNRISHHKILAIVGTAESNSE-HPLGTAITKYCKQELDTETLGTCIDFQVVPG----CGISC 75 (185)
T ss_dssp CCCCSCCCEEEEEEECSCTTTSCHHHHHHHHHHGGGSSS-CHHHHHHHHHHHHHHTCSCCCCCBCCEEETT----TEEEE
T ss_pred CCCcCCcEEEEEEEecCCcCCCCHHHHHHHHHHHHccCC-CHHHHHHHHHHHhhcCCCCCCCccceEEecc----ceEEE
Confidence 899999999998753111123567788888888877666 99999999876421000 001112222221 11111
Q ss_pred EEEcCC-----------------------------------------------CcEEEEEcCcHHHHHHhcCCChHHHHH
Q 003103 415 TYIDSD-----------------------------------------------GNWHRASKGAPEQILALCNCREDVRKK 447 (847)
Q Consensus 415 ~~~~~~-----------------------------------------------g~~~~~~KGa~e~i~~~~~~~~~~~~~ 447 (847)
.+...+ .+.+.+..|+++.+.+..-. .++.
T Consensus 76 ~V~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi~---i~~~ 152 (185)
T 2kmv_A 76 KVTNIEGLLHKNNWNIEDNNIKNASLVQIDASNEQSSTSSSMIIDAQISNALNAQQYKVLIGNREWMIRNGLV---INND 152 (185)
T ss_dssp EECCSGGGSSCSSCCCCSCCCCCCCCCCTTTTSCCCCCCCCCCCSTTTTTGGGSCCEEEEEECHHHHHHHTCC---CCHH
T ss_pred EECCccccccccccccccccccccccccccccccccccccccccccccccccCCCceEEEECCHHHHHHcCCC---CCHH
Confidence 221100 01146778999987653211 1223
Q ss_pred HHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCC
Q 003103 448 VHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDP 493 (847)
Q Consensus 448 ~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~ 493 (847)
+.+.+.++..+|..++.+|... +++|++++.|+
T Consensus 153 ~~~~~~~~~~~G~T~V~vaidg-------------~l~g~iavaD~ 185 (185)
T 2kmv_A 153 VNDFMTEHERKGRTAVLVAVDD-------------ELCGLIAIADT 185 (185)
T ss_dssp HHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEEECC
T ss_pred HHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEEEcC
Confidence 4455667788899999999865 79999999995
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=97.88 E-value=2.5e-05 Score=79.25 Aligned_cols=124 Identities=18% Similarity=0.152 Sum_probs=85.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|++. +++.++|+.....+....+..|+.... + .+... +.. -...-.|+
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f-~--~~~~~-----------~~~-----~~~kp~~~ 159 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLF-D--SITTS-----------EEA-----GFFKPHPR 159 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGC-S--EEEEH-----------HHH-----TBCTTSHH
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHc-c--eeEec-----------ccc-----CCCCcCHH
Confidence 5678999999999999 999999999998888888888874311 0 00000 000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCc-CChhhhhhcC---cceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGV-NDAPALKKAD---IGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~-ND~~aLk~Ad---VGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
--..+.+.+.-....+.++||+. ||..|.+.|+ +++++|++.+..++.||+++ +++..+...+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~--~~~~el~~~l~ 227 (234)
T 3u26_A 160 IFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVD 227 (234)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEE--SSTHHHHHHHH
T ss_pred HHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEee--CCHHHHHHHHH
Confidence 22334444433345689999997 9999999999 67777766666677999998 67888877764
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.88 E-value=2e-05 Score=76.93 Aligned_cols=126 Identities=14% Similarity=0.104 Sum_probs=79.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcC--CCCCCCCCCcccCccccccCCcch
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLG--MGTNMYPSSSLLGQDKDASIAALP 555 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~---------------~tA~~iA~~~G--i~~~~~~~~~~~~~~~~~~~~~~~ 555 (847)
++.|++.++++.|++.|+++.++|+... ..+....+++| +..-.. ....+.+..
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~~~~~~~~------- 97 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFM--CPHGPDDGC------- 97 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEE--ECCCTTSCC-------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEE--cCCCCCCCC-------
Confidence 5789999999999999999999999875 45566666777 321000 000000000
Q ss_pred HHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCc---ceecccccHHHh----hccCEEEcCC
Q 003103 556 VDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI---GIAVADATDAAR----SASDIVLTEP 628 (847)
Q Consensus 556 ~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV---GIamg~g~~~a~----~aaDivl~~~ 628 (847)
-...-.|+-=..+.+.+.-....+.|+||+.||..|.++|++ +++.|.+..... ..+|+++ +
T Consensus 98 ---------~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~--~ 166 (179)
T 3l8h_A 98 ---------ACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVC--E 166 (179)
T ss_dssp ---------SSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEE--S
T ss_pred ---------CCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEe--c
Confidence 000011111122333343334568999999999999999995 777775554443 4579998 6
Q ss_pred ChhhHHHHHH
Q 003103 629 GLSVIISAVL 638 (847)
Q Consensus 629 ~~~~i~~~i~ 638 (847)
++..+.+.+.
T Consensus 167 ~l~el~~~l~ 176 (179)
T 3l8h_A 167 DLAAVAEQLL 176 (179)
T ss_dssp SHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 7888877664
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.87 E-value=1.3e-05 Score=82.27 Aligned_cols=127 Identities=14% Similarity=0.077 Sum_probs=79.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
.++.|++.+.++.|++.|+++.++|+.....+....+. |+.........+.+.... ...-.|
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~-----------------~~kp~~ 169 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVK-----------------YGKPNP 169 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCS-----------------SCTTSS
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCC-----------------CCCCCh
Confidence 35679999999999999999999999887766666666 775321001111111000 011112
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc-eecccccH----HHhhccCEEEcCCChhhHHHHHH
Q 003103 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADATD----AARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 572 ~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~g~~----~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
+--..+.+.+.-....+.|+||+.||..|.+.|+++ |.+..|.. ..+..||+++ +++..+.+.+.
T Consensus 170 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~--~s~~el~~~l~ 239 (243)
T 3qxg_A 170 EPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLF--PSMQTLCDSWD 239 (243)
T ss_dssp HHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEE--SCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEE--CCHHHHHHHHH
Confidence 222233333333335688999999999999999984 44444322 2334699998 67888877664
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.87 E-value=1.6e-05 Score=81.32 Aligned_cols=127 Identities=11% Similarity=0.017 Sum_probs=78.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
.++.|++.+.++.|++.|+++.++|+.....+....+. |+.....+...+.+... -...-.|
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~-----------------~~~kp~~ 168 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDV-----------------KYGKPNP 168 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGC-----------------SSCTTSS
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccC-----------------CCCCCCC
Confidence 45679999999999999999999999887766666666 77532100111111000 0011122
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc-eecccc--c--HHHhhccCEEEcCCChhhHHHHHH
Q 003103 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADA--T--DAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 572 ~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~g--~--~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
+--..+.+.+.-....+.|+||+.||..|.+.|+++ |.+..| . +..+..||+++ +++..+.+.+.
T Consensus 169 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~--~~~~el~~~l~ 238 (247)
T 3dv9_A 169 EPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLF--HSMPDFNKNWE 238 (247)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEE--CCHHHHHHHHH
Confidence 222334444443345688999999999999999975 333332 2 22234799998 67888777665
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.87 E-value=1.6e-05 Score=80.55 Aligned_cols=124 Identities=10% Similarity=0.083 Sum_probs=80.2
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeC
Q 003103 494 PRHDSAETIRRALNLGVNVKMITGDQ---LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (847)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~---~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~s 570 (847)
+.+++.+.++.|++.|+++.++|+.. ........+..|+.... . ..+.+ ++. . ...-.
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f-~-~~~~~------------~~~-~----~~kp~ 160 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFI-D-KTFFA------------DEV-L----SYKPR 160 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGC-S-EEEEH------------HHH-T----CCTTC
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHh-h-hheec------------ccc-C----CCCCC
Confidence 47899999999999999999999998 88888888888874311 0 00000 000 0 00011
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCc-CChhhhhhcCcceec---ccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 571 PEHKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIGIAV---ADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 571 P~qK~~iV~~lq~~g~~V~miGDG~-ND~~aLk~AdVGIam---g~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
|+--..+.+.+.-....+.++||+. ||..|++.|++++++ +++.+..+..+|+++ +++..+...+.
T Consensus 161 ~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 230 (235)
T 2om6_A 161 KEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEI--PSIANLKDVIE 230 (235)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEE--SSGGGHHHHHH
T ss_pred HHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchH--hhHHHHHHHHH
Confidence 2211222333322235689999999 999999999999998 322222334578877 66777776664
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.86 E-value=1.4e-05 Score=82.77 Aligned_cols=128 Identities=16% Similarity=0.049 Sum_probs=83.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.+++.+.++.|++.|+++.++|+.....+..+.+..|+.... +...+.+.... ....-.|+
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f-~~~i~~~~~~~----------------~~~Kp~~~ 172 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELA-GEHIYDPSWVG----------------GRGKPHPD 172 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHH-CSCEECGGGGT----------------TCCTTSSH
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhc-cceEEeHhhcC----------------cCCCCChH
Confidence 45789999999999999999999999998899999998874210 00001000000 00011122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc-eecccc-------c-HHHhhccCEEEcCCChhhHHHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADA-------T-DAARSASDIVLTEPGLSVIISAVLT 639 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~g-------~-~~a~~aaDivl~~~~~~~i~~~i~~ 639 (847)
-=..+.+.+.-....+.++||+.||..|.+.|+++ +.+..| . +..+..+|+++ +++..+.+.+..
T Consensus 173 ~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi--~~l~el~~~l~~ 246 (259)
T 4eek_A 173 LYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVL--TSHAELRAALAE 246 (259)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEE--CSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhh--CCHHHHHHHHHh
Confidence 22233333333335689999999999999999998 444433 2 23344599998 778888888764
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.85 E-value=2.3e-05 Score=81.76 Aligned_cols=127 Identities=11% Similarity=0.062 Sum_probs=84.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+..... ..+.+.+.. -...-.|+
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~----------------~~~kp~~~ 172 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTP--ASTVFATDV----------------VRGRPFPD 172 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCC--SEEECGGGS----------------SSCTTSSH
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCC--ceEecHHhc----------------CCCCCCHH
Confidence 567899999999999999999999999988888888887643211 111110000 00011122
Q ss_pred hHHHHHHHHhhcC-CEEEEEcCCcCChhhhhhcC---cceecccc------------------------cHHHh-hccCE
Q 003103 573 HKYEIVKRLQERK-HICGMTGDGVNDAPALKKAD---IGIAVADA------------------------TDAAR-SASDI 623 (847)
Q Consensus 573 qK~~iV~~lq~~g-~~V~miGDG~ND~~aLk~Ad---VGIamg~g------------------------~~~a~-~aaDi 623 (847)
-=..+.+.+.-.. ..+.|+||+.||..|.+.|+ |+|++|.+ .+..+ ..+|+
T Consensus 173 ~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~ 252 (277)
T 3iru_A 173 MALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHY 252 (277)
T ss_dssp HHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCE
Confidence 2233444444444 67899999999999999999 56666632 22333 34999
Q ss_pred EEcCCChhhHHHHHHH
Q 003103 624 VLTEPGLSVIISAVLT 639 (847)
Q Consensus 624 vl~~~~~~~i~~~i~~ 639 (847)
++ +++..+...+..
T Consensus 253 v~--~~~~el~~~l~~ 266 (277)
T 3iru_A 253 VI--DSVADLETVITD 266 (277)
T ss_dssp EE--SSGGGTHHHHHH
T ss_pred Ee--cCHHHHHHHHHH
Confidence 98 678888887753
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=1.1e-05 Score=85.14 Aligned_cols=129 Identities=10% Similarity=0.001 Sum_probs=83.5
Q ss_pred CCCCcchHHHHHHHHhCCC--eEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEe
Q 003103 492 DPPRHDSAETIRRALNLGV--NVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI--~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 569 (847)
-++.|++.+.++.|++.|+ ++.++|+.....+....+.+|+..... ..+.+...... ...+.-
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd--~v~~~~~~~~~-------------~~~~Kp 205 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFD--GLTYCDYSRTD-------------TLVCKP 205 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCS--EEECCCCSSCS-------------SCCCTT
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccc--eEEEeccCCCc-------------ccCCCc
Confidence 3568999999999999999 999999999988999999999854210 01100000000 000111
Q ss_pred ChhhHHHHHHHHhhcC-CEEEEEcCCcCChhhhhhcCcceecccccHHH------hhccCEEEcCCChhhHHHHH
Q 003103 570 FPEHKYEIVKRLQERK-HICGMTGDGVNDAPALKKADIGIAVADATDAA------RSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 570 sP~qK~~iV~~lq~~g-~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a------~~aaDivl~~~~~~~i~~~i 637 (847)
.|+-=..+.+.+.-.. ..+.|+||+.||..|.++|++|.+|+.+.... ...||+++ +++..+.+++
T Consensus 206 ~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi--~sl~el~~~l 278 (282)
T 3nuq_A 206 HVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVI--SDILELPHVV 278 (282)
T ss_dssp SHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEE--SSGGGGGGTS
T ss_pred CHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEe--CCHHHHHHHh
Confidence 1222222333333334 67899999999999999999999987332222 33788988 6677766544
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=97.82 E-value=7.8e-06 Score=81.38 Aligned_cols=122 Identities=15% Similarity=0.070 Sum_probs=82.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|++.|+++.++|+.....+....++.|+.... + ..+.+... -...-.|+
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f-~-~~~~~~~~-----------------~~~kp~~~ 149 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFF-D-IVLSGEEF-----------------KESKPNPE 149 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC-S-EEEEGGGC-----------------SSCTTSSH
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhhe-e-eEeecccc-----------------cCCCCChH
Confidence 46889999999999999999999999999999999999985311 0 00100000 00111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecc-cc-cHHHhhccCEEEcCCChhhHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DA-TDAARSASDIVLTEPGLSVIIS 635 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg-~g-~~~a~~aaDivl~~~~~~~i~~ 635 (847)
--..+.+.+.-....+.++||+.||..|.+.|++++.+. .+ ....+..+|+++ +++..+.+
T Consensus 150 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~--~~~~el~~ 212 (214)
T 3e58_A 150 IYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLL--DSLTDVLD 212 (214)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEE--SSGGGGGG
T ss_pred HHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHH--HHHHHHHh
Confidence 233444444434456899999999999999999988885 22 334447899998 55665543
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.80 E-value=2.3e-05 Score=80.15 Aligned_cols=124 Identities=14% Similarity=0.061 Sum_probs=81.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|++.|+++.++|+.....+..+.+++|+.... + ..+.+.... ...-.|+
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f-~-~~~~~~~~~-----------------~~Kp~~~ 165 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVL-D-SCLSADDLK-----------------IYKPDPR 165 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC-S-EEEEGGGTT-----------------CCTTSHH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHc-C-EEEEccccC-----------------CCCCCHH
Confidence 46799999999999999999999999998888888999984311 0 011000000 0111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcce---ecccccHHHhhcc-CEEEcCCChhhHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI---AVADATDAARSAS-DIVLTEPGLSVIISAV 637 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGI---amg~g~~~a~~aa-Divl~~~~~~~i~~~i 637 (847)
--..+.+.+.-....+.|+||+.||..|.+.|++.. ..|.+.+..+..+ |+++ +++..+...+
T Consensus 166 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 232 (240)
T 2no4_A 166 IYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQV--NSLSELWPLL 232 (240)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEE--SSGGGHHHHH
T ss_pred HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceee--CCHHHHHHHH
Confidence 233344444433456889999999999999999554 3443322233456 9988 5677777655
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.76 E-value=1.4e-05 Score=81.20 Aligned_cols=125 Identities=8% Similarity=0.028 Sum_probs=82.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... + ..+.+... -...-.|+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f-~-~~~~~~~~-----------------~~~Kp~~~ 155 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF-D-HLLSVDPV-----------------QVYKPDNR 155 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC-S-EEEESGGG-----------------TCCTTSHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhh-h-eEEEeccc-----------------CCCCCCHH
Confidence 46799999999999999999999999988888888888874311 0 01100000 01111233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecc----cccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA----DATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg----~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
--..+.+.+.-....+.|+||+.||..|.+.|+++.++- +..+..+..+|+++ +++..+...+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 223 (232)
T 1zrn_A 156 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVELFE 223 (232)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHTTC-
T ss_pred HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEE--CCHHHHHHHHH
Confidence 333444444433456889999999999999999998883 22233345689888 56777665543
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00011 Score=75.08 Aligned_cols=125 Identities=14% Similarity=0.153 Sum_probs=80.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+.... + ..+.+.... ...-.|+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f-~-~~~~~~~~~-----------------~~Kp~~~ 154 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFF-E-HVIISDFEG-----------------VKKPHPK 154 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGC-S-EEEEGGGGT-----------------CCTTCHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhc-c-EEEEeCCCC-----------------CCCCCHH
Confidence 45789999999999999999999999988888888888874311 0 011000000 0001112
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCc-CChhhhhhcCcceec---ccccHHHhh---ccCEEEcCCChhhHHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIGIAV---ADATDAARS---ASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~-ND~~aLk~AdVGIam---g~g~~~a~~---aaDivl~~~~~~~i~~~i~ 638 (847)
-=..+.+.+.-....+.|+||+. ||..|.+.|+++.+. |.+...... .+|.++ +++..+...+.
T Consensus 155 ~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~l~ 225 (241)
T 2hoq_A 155 IFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEI--DNLESLLEVLA 225 (241)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEE--SSTTHHHHHHH
T ss_pred HHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEE--CCHHHHHHHHH
Confidence 11223333333345688999998 999999999997654 333333332 689988 56777776653
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.66 E-value=3.9e-05 Score=77.38 Aligned_cols=115 Identities=12% Similarity=-0.017 Sum_probs=79.0
Q ss_pred CCCcchHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 493 PPRHDSAETIRRALNLG-VNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aG-I~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
++.|++.+.++.|++.| +++.++|+..........+.+|+.... . .+++.-.|
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f-~-------------------------~~~~~~kp 158 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYF-D-------------------------HIEVMSDK 158 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGC-S-------------------------EEEEESCC
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhh-h-------------------------eeeecCCC
Confidence 56789999999999999 999999999888888888888874211 0 12232223
Q ss_pred hhHHHHHHHHhh----cCCEEEEEcCCc-CChhhhhhcCcceec-------ccccHHHhhcc-CEEEcCCChhhHHHHH
Q 003103 572 EHKYEIVKRLQE----RKHICGMTGDGV-NDAPALKKADIGIAV-------ADATDAARSAS-DIVLTEPGLSVIISAV 637 (847)
Q Consensus 572 ~qK~~iV~~lq~----~g~~V~miGDG~-ND~~aLk~AdVGIam-------g~g~~~a~~aa-Divl~~~~~~~i~~~i 637 (847)
|...++.+.+ ....+.++||+. ||..|.+.|+++.++ |.+....+..+ |+++ +++..++..+
T Consensus 159 --k~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~--~~l~el~~~l 233 (234)
T 3ddh_A 159 --TEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQV--KRLDDLLSLL 233 (234)
T ss_dssp --SHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEEC--SSGGGHHHHC
T ss_pred --CHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceec--ccHHHHHHhc
Confidence 4444433332 234588999996 999999999998887 22222223344 8887 6687777653
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=97.63 E-value=3.3e-05 Score=81.07 Aligned_cols=67 Identities=22% Similarity=0.259 Sum_probs=57.3
Q ss_pred hhHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 572 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 572 ~qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
..|...++.+.+. | ..++++||+.||.+|++.|++|++|+++.+..++.||+++.+++-.++.++++
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~ 260 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 260 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccHHHHHhCCeeCcCCCCChHHHHHH
Confidence 4788888777654 3 35899999999999999999999999998889999999998777778887775
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=97.63 E-value=2.6e-05 Score=80.23 Aligned_cols=67 Identities=12% Similarity=0.235 Sum_probs=54.6
Q ss_pred EEeChh--hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhc--CcceecccccHHHhhccCEEEcC-CChhhHHHHHH
Q 003103 567 AGVFPE--HKYEIVKRLQERKHICGMTGDGVNDAPALKKA--DIGIAVADATDAARSASDIVLTE-PGLSVIISAVL 638 (847)
Q Consensus 567 ar~sP~--qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~A--dVGIamg~g~~~a~~aaDivl~~-~~~~~i~~~i~ 638 (847)
-.+.|. .|..-++.+.+.-. |+++||+.||.+||+.| +.|||||++ ++.||+++.+ ++-..+.++|+
T Consensus 152 lei~~~~~~Kg~al~~l~~~~g-via~GD~~ND~~Ml~~a~~g~~vam~Na----~~~A~~v~~~~~~~~gV~~~l~ 223 (239)
T 1u02_A 152 IELRVPGVNKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIKVGEG----ETHAKFHVADYIEMRKILKFIE 223 (239)
T ss_dssp EEEECTTCCHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEEESSS----CCCCSEEESSHHHHHHHHHHHH
T ss_pred EEEEcCCCCHHHHHHHHHhhCC-eEEEeCCCccHHHHHHhhCCcEEEECCC----CCcceEEeCCCCCHHHHHHHHH
Confidence 345554 79999999887633 89999999999999999 999999987 6789999876 55666666664
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=9.9e-05 Score=74.25 Aligned_cols=135 Identities=16% Similarity=0.129 Sum_probs=79.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC---------------HHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHH
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQ---------------LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~---------------~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (847)
++.|++.++++.|+++|+++.++|+.. ...+..+.+++|+.- .. .+............
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---~~-~~~~~~~~~~~~~~--- 122 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDL---DG-IYYCPHHPQGSVEE--- 122 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCC---SE-EEEECCBTTCSSGG---
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCce---EE-EEECCcCCCCcccc---
Confidence 678999999999999999999999998 366777778888741 00 00000000000000
Q ss_pred HHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc--eec--ccc-cHHHhhccCEEEcCCChhh
Q 003103 558 ELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG--IAV--ADA-TDAARSASDIVLTEPGLSV 632 (847)
Q Consensus 558 ~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG--Iam--g~g-~~~a~~aaDivl~~~~~~~ 632 (847)
. .......+-.|+-=..+.+.+.-....+.|+||+.||..+.++|++. |.+ |.. .+.....+|+++ +++..
T Consensus 123 -~-~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi--~~l~e 198 (211)
T 2gmw_A 123 -F-RQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLAD 198 (211)
T ss_dssp -G-BSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGG
T ss_pred -c-CccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEe--CCHHH
Confidence 0 00000111122222333344433334588999999999999999964 333 422 233344689988 66888
Q ss_pred HHHHHH
Q 003103 633 IISAVL 638 (847)
Q Consensus 633 i~~~i~ 638 (847)
+.+.+.
T Consensus 199 l~~~l~ 204 (211)
T 2gmw_A 199 LPQAIK 204 (211)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877664
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.61 E-value=1.4e-05 Score=79.85 Aligned_cols=120 Identities=10% Similarity=0.055 Sum_probs=77.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|++. +++.++|+.....+..+.+++|+.... . ..+.+.+. -...-.|+
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f-~-~~~~~~~~-----------------~~~KP~~~ 142 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRM-A-VTISADDT-----------------PKRKPDPL 142 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGE-E-EEECGGGS-----------------SCCTTSSH
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhc-c-EEEecCcC-----------------CCCCCCcH
Confidence 4688999999999999 999999999988888888888764210 0 00000000 00001122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceeccc----ccHHHhhccCEEEcCCChhhHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD----ATDAARSASDIVLTEPGLSVIIS 635 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~----g~~~a~~aaDivl~~~~~~~i~~ 635 (847)
--..+.+.+.-....+.++||+.||..|.+.|++++++.+ ..+..++ +|+++ +++..+.+
T Consensus 143 ~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~--~~~~el~~ 206 (209)
T 2hdo_A 143 PLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRF--QKPLDILE 206 (209)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEE--SSGGGGGG
T ss_pred HHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEe--CCHHHHHH
Confidence 2233444443334568999999999999999999998742 2333444 99988 44555543
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.58 E-value=4.6e-05 Score=81.38 Aligned_cols=71 Identities=27% Similarity=0.273 Sum_probs=59.7
Q ss_pred EeChh--hHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEc-CCChhhHHHHHH
Q 003103 568 GVFPE--HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLT-EPGLSVIISAVL 638 (847)
Q Consensus 568 r~sP~--qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~-~~~~~~i~~~i~ 638 (847)
.+.|. .|...++.+.+. | ..|+++||+.||.+|++.|++|++|+++.+..++.||+++. +++-.++.++|+
T Consensus 217 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~ 294 (301)
T 2b30_A 217 EVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 294 (301)
T ss_dssp EEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred EecCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcHHHHhhCCEEEccCCCCcHHHHHHH
Confidence 44444 798888887654 3 35889999999999999999999999988889999999998 888888888775
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.56 E-value=4.6e-05 Score=80.69 Aligned_cols=66 Identities=24% Similarity=0.326 Sum_probs=56.8
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
+|..-++.+.+. | ..++++||+.||.+|++.|++|++|+++.+..++.||+++.+++-.++.++|+
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~ 285 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 285 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCHHHHhhCceeecCCCcChHHHHHH
Confidence 688877777654 3 35899999999999999999999999988889999999998877788888775
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.56 E-value=1.8e-05 Score=81.60 Aligned_cols=121 Identities=14% Similarity=0.094 Sum_probs=74.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH-HHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG-RRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA-~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
++.|++.+.++.|++.|+++.++|+.........- +..|+.... + ..+.+.+. ...+..|
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f-~-~~~~~~~~-----------------~~~~~Kp 172 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLF-S-HIVLGDDP-----------------EVQHGKP 172 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTS-S-CEECTTCT-----------------TCCSCTT
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhhe-e-eEEecchh-----------------hccCCCC
Confidence 56889999999999999999999999866544322 222332110 0 00100000 0011112
Q ss_pred hhHHHHHHHHhhcC-----CEEEEEcCCcCChhhhhhcC---cceecccccHHHhhccCEEEcCCChhhHHH
Q 003103 572 EHKYEIVKRLQERK-----HICGMTGDGVNDAPALKKAD---IGIAVADATDAARSASDIVLTEPGLSVIIS 635 (847)
Q Consensus 572 ~qK~~iV~~lq~~g-----~~V~miGDG~ND~~aLk~Ad---VGIamg~g~~~a~~aaDivl~~~~~~~i~~ 635 (847)
+- .-+-+.+++.| ..+.|+||+.||..|.+.|+ +++++|++.+..+..||+++ +++..+..
T Consensus 173 ~~-~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~--~sl~el~~ 241 (250)
T 3l5k_A 173 DP-DIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVL--NSLQDFQP 241 (250)
T ss_dssp ST-HHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEEC--SCGGGCCG
T ss_pred Ch-HHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEee--cCHHHhhH
Confidence 11 11222333333 66899999999999999999 66777766666788999998 45655543
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.56 E-value=9.6e-05 Score=74.96 Aligned_cols=123 Identities=13% Similarity=0.084 Sum_probs=80.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|+ .|+++.++|+.........-+.+|+.... + ..+...... ...-.|+
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f-~-~~~~~~~~~-----------------~~kp~~~ 166 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYF-K-KIILSEDLG-----------------VLKPRPE 166 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGC-S-EEEEGGGTT-----------------CCTTSHH
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhc-e-eEEEeccCC-----------------CCCCCHH
Confidence 46789999999999 99999999999888888888888874311 0 000000000 0001111
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCc-CChhhhhhcCcceecccccH--HHhhccCEEEcCCChhhHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIGIAVADATD--AARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~-ND~~aLk~AdVGIamg~g~~--~a~~aaDivl~~~~~~~i~~~i 637 (847)
--..+.+.+.-....+.++||+. ||..|.+.|+++++|.+... ..+..+|+++ +++..+..+.
T Consensus 167 ~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi--~sl~e~~~~~ 232 (240)
T 3qnm_A 167 IFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHI--HSLKELMNLL 232 (240)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEE--SSTHHHHHHT
T ss_pred HHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEE--CCHHHHHHHH
Confidence 11222233322235689999995 99999999999999963322 4556799999 6677776554
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.54 E-value=8.2e-05 Score=76.82 Aligned_cols=123 Identities=13% Similarity=0.113 Sum_probs=82.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|+ |+++.++|+.....+..+.+.+|+.... + ..+..... -...-.|+
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f-~-~~~~~~~~-----------------~~~Kp~~~ 151 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF-D-AVISVDAK-----------------RVFKPHPD 151 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC-S-EEEEGGGG-----------------TCCTTSHH
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhc-c-EEEEcccc-----------------CCCCCCHH
Confidence 57899999999999 9999999999998888888899874311 0 01100000 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccc---------------------------cHHHhhccCEEE
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADA---------------------------TDAARSASDIVL 625 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g---------------------------~~~a~~aaDivl 625 (847)
--..+.+.+.-....+.|+||+.||..|.+.|+++.++.+. .+..+..+|+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (253)
T 1qq5_A 152 SYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV 231 (253)
T ss_dssp HHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE
T ss_pred HHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeee
Confidence 33334444433335688999999999999999999888643 122345689988
Q ss_pred cCCChhhHHHHHH
Q 003103 626 TEPGLSVIISAVL 638 (847)
Q Consensus 626 ~~~~~~~i~~~i~ 638 (847)
+++..+...+.
T Consensus 232 --~~~~el~~~l~ 242 (253)
T 1qq5_A 232 --PALGDLPRLVR 242 (253)
T ss_dssp --SSGGGHHHHHH
T ss_pred --CCHHHHHHHHH
Confidence 66888877664
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.53 E-value=8e-05 Score=73.85 Aligned_cols=121 Identities=10% Similarity=0.087 Sum_probs=80.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+ ++.|++. +++.++|+.....+..+.+++|+.... + ..+.+.+. -...-.|+
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f-~-~~~~~~~~-----------------~~~Kp~~~ 132 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYF-K-GIFSAESV-----------------KEYKPSPK 132 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGC-S-EEEEGGGG-----------------TCCTTCHH
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhC-c-EEEehhhc-----------------CCCCCCHH
Confidence 45789999 9999999 999999999988888888899874321 0 01100000 00111233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceec-c---cccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-A---DATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIam-g---~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
--..+.+.+. ...+.|+||+.||..|.+.|+++..+ . ++.+..+..+|.++ +++..+...+.
T Consensus 133 ~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 198 (201)
T 2w43_A 133 VYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIV--NDFKELYEWIL 198 (201)
T ss_dssp HHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEE--SSHHHHHHHHH
T ss_pred HHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEE--CCHHHHHHHHH
Confidence 3334445554 45688999999999999999999777 2 22222244689887 56777766553
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.52 E-value=4.3e-05 Score=80.03 Aligned_cols=71 Identities=25% Similarity=0.304 Sum_probs=59.1
Q ss_pred EeChh--hHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 568 GVFPE--HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 568 r~sP~--qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
.+.|. .|...++.+.+. | ..+.++||+.||.+|++.|++|++|+++.+..++.||+++.+++-..+.++|+
T Consensus 183 ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred EEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 44554 788888877653 2 45889999999999999999999999888888889999998877788887764
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00012 Score=74.97 Aligned_cols=119 Identities=11% Similarity=0.081 Sum_probs=82.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|++. +++.++|+........+.+.+|+.-+ .+...+. .....|+
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f~-----~~~~~~~------------------~~~~kp~ 171 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPWD-----VIIGSDI------------------NRKYKPD 171 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCCS-----CCCCHHH------------------HTCCTTS
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCee-----EEEEcCc------------------CCCCCCC
Confidence 5678999999999997 99999999999888888899987411 1110000 0111122
Q ss_pred hHHHHH-HHHhhcC---CEEEEEcCCcCChhhhhhcCcceecccccH---------H-HhhccCEEEcCCChhhHHHHHH
Q 003103 573 HKYEIV-KRLQERK---HICGMTGDGVNDAPALKKADIGIAVADATD---------A-ARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV-~~lq~~g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~---------~-a~~aaDivl~~~~~~~i~~~i~ 638 (847)
...+ +.+++.| ..+.++||+.||..|.+.|+++++|.+... . .+..+|+++ +++..+...+.
T Consensus 172 --~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~--~~~~el~~~l~ 247 (254)
T 3umg_A 172 --PQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISA--TDITDLAAQLR 247 (254)
T ss_dssp --HHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEE--SSHHHHHHHHH
T ss_pred --HHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEE--CCHHHHHHHhc
Confidence 2222 2333333 468999999999999999999999964211 1 356789998 77888888775
Q ss_pred H
Q 003103 639 T 639 (847)
Q Consensus 639 ~ 639 (847)
.
T Consensus 248 ~ 248 (254)
T 3umg_A 248 A 248 (254)
T ss_dssp H
T ss_pred C
Confidence 3
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00015 Score=73.43 Aligned_cols=120 Identities=10% Similarity=0.052 Sum_probs=81.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|++. +++.++|+.....+....+.+|+.... + ..+..... ....|
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f-~-~~~~~~~~-------------------~~~kp- 159 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFF-K-DIFVSEDT-------------------GFQKP- 159 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGC-S-EEEEGGGT-------------------TSCTT-
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhh-h-eEEEeccc-------------------CCCCC-
Confidence 5678999999999999 999999999988888888888875311 0 00000000 00111
Q ss_pred hHHHHH-HHHhhcC----CEEEEEcCCc-CChhhhhhcCccee-cccc--cHHHhhccCEEEcCCChhhHHHHHH
Q 003103 573 HKYEIV-KRLQERK----HICGMTGDGV-NDAPALKKADIGIA-VADA--TDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV-~~lq~~g----~~V~miGDG~-ND~~aLk~AdVGIa-mg~g--~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
|.... +.+++.| ..+.|+||+. ||..|.+.|+++.. ++.| .+..+..+|+++ +++..+.+.+.
T Consensus 160 -~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~--~~~~el~~~l~ 231 (238)
T 3ed5_A 160 -MKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEI--RKLEELYHILN 231 (238)
T ss_dssp -CHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEE--SSGGGHHHHHT
T ss_pred -ChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEE--CCHHHHHHHHH
Confidence 12222 2333334 4689999998 99999999999544 3433 555667899998 67888877764
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.50 E-value=8.1e-05 Score=76.46 Aligned_cols=122 Identities=13% Similarity=0.075 Sum_probs=81.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.+++.+.++.|++. +++.++|+........+.+.+|+.- + .+...+ .. . ...-.|+
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f---~--~~~~~~-----------~~-~----~~kp~~~ 177 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPW---D--MLLCAD-----------LF-G----HYKPDPQ 177 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCC---S--EECCHH-----------HH-T----CCTTSHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCc---c--eEEeec-----------cc-c----cCCCCHH
Confidence 4578999999999985 9999999999888888888888741 1 110000 00 0 0011122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceeccc-----cc---HH--HhhccCEEEcCCChhhHHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD-----AT---DA--ARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~-----g~---~~--a~~aaDivl~~~~~~~i~~~i~ 638 (847)
-=..+.+.+.-....+.|+||+.||..|.+.|+++++|.+ |. +. .+..+|+++ +++..+...+.
T Consensus 178 ~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~--~~l~el~~~l~ 251 (254)
T 3umc_A 178 VYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIA--SDLLDLHRQLA 251 (254)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEE--CCHHHHHHHhc
Confidence 2222333333233568999999999999999999999964 22 11 256789998 67888877764
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00013 Score=71.71 Aligned_cols=86 Identities=13% Similarity=0.109 Sum_probs=64.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE--e
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQ-LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--V 569 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~-~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar--~ 569 (847)
++.|++.++++.|++.|+++.++||.. ...+..+.+.+|+... |.. .
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~------------------------------f~~~~~ 117 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRY------------------------------FVHREI 117 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTT------------------------------EEEEEE
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhh------------------------------cceeEE
Confidence 578999999999999999999999998 6888999999998531 111 1
Q ss_pred ChhhHHHHHH-HHhhcC---CEEEEEcCCcCChhhhhhcCcce
Q 003103 570 FPEHKYEIVK-RLQERK---HICGMTGDGVNDAPALKKADIGI 608 (847)
Q Consensus 570 sP~qK~~iV~-~lq~~g---~~V~miGDG~ND~~aLk~AdVGI 608 (847)
.+..|....+ .+++.| ..+.|+||+.||+.+.++|++..
T Consensus 118 ~~~~k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~ 160 (187)
T 2wm8_A 118 YPGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTC 160 (187)
T ss_dssp SSSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred EeCchHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEE
Confidence 2233433333 333333 45889999999999999998754
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00013 Score=76.56 Aligned_cols=113 Identities=14% Similarity=-0.021 Sum_probs=74.6
Q ss_pred CCcchHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 494 PRHDSAETIRRALNL-GVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 494 lr~~~~~~I~~l~~a-GI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
+.+++.+.++.|++. |+++.++|+.....+....+..|+.. . ...+.+.+.. ...-.|+
T Consensus 115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~--f-~~i~~~~~~~-----------------~~kp~~~ 174 (275)
T 2qlt_A 115 EVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR--P-EYFITANDVK-----------------QGKPHPE 174 (275)
T ss_dssp ECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC--C-SSEECGGGCS-----------------SCTTSSH
T ss_pred cCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc--c-CEEEEcccCC-----------------CCCCChH
Confidence 478999999999999 99999999999988888888888742 1 1111111000 0001122
Q ss_pred hHHHHHHHHhh-------cCCEEEEEcCCcCChhhhhhcCcceec---ccc-cHHHhhccCEEEc
Q 003103 573 HKYEIVKRLQE-------RKHICGMTGDGVNDAPALKKADIGIAV---ADA-TDAARSASDIVLT 626 (847)
Q Consensus 573 qK~~iV~~lq~-------~g~~V~miGDG~ND~~aLk~AdVGIam---g~g-~~~a~~aaDivl~ 626 (847)
--..+.+.+.- ....+.++||+.||..|++.|++++++ +.+ .+..+..||+++.
T Consensus 175 ~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~ 239 (275)
T 2qlt_A 175 PYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVK 239 (275)
T ss_dssp HHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEES
T ss_pred HHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEEC
Confidence 22334444443 334689999999999999999976665 433 3333345899874
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.47 E-value=6.2e-05 Score=77.67 Aligned_cols=66 Identities=18% Similarity=0.166 Sum_probs=55.0
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhc-------cCEEEcCCChhhHHHHHH
Q 003103 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSA-------SDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~a-------aDivl~~~~~~~i~~~i~ 638 (847)
.|..-++.+.+. | ..|.++||+.||.+|++.|++|++||++.+..++. ||++..+++-.++.++|+
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~ 238 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcHHHHHHHhcccccceeecCCcchhHHHHHHH
Confidence 677777777654 3 35889999999999999999999999988888885 889988777777877775
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00011 Score=74.08 Aligned_cols=123 Identities=9% Similarity=0.049 Sum_probs=76.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEE--EeC
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA--GVF 570 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a--r~s 570 (847)
++.+++.+.++.++. ++.++|+........+.+++|+.... +...+.+ +.. . .. .-.
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~-~~~~~~~------------~~~-~----~~~~kpk 145 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYF-APHIYSA------------KDL-G----ADRVKPK 145 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGT-TTCEEEH------------HHH-C----TTCCTTS
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhc-cceEEec------------ccc-c----cCCCCcC
Confidence 446788888887764 99999999988888888888874211 0000000 000 0 00 011
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc-eecccccH-------HHhhc-cCEEEcCCChhhHHHHHH
Q 003103 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADATD-------AARSA-SDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 571 P~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~g~~-------~a~~a-aDivl~~~~~~~i~~~i~ 638 (847)
|+--..+.+.+.-....+.++||+.||.+|++.|+++ ++++++.. ..++. ||+++ +++..+.+.+.
T Consensus 146 ~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~--~~~~el~~~l~ 220 (229)
T 2fdr_A 146 PDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVI--SRMQDLPAVIA 220 (229)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHHH
T ss_pred HHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceee--cCHHHHHHHHH
Confidence 2222233344433335688999999999999999998 66765443 25555 99998 56777766553
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00011 Score=73.64 Aligned_cols=115 Identities=10% Similarity=0.086 Sum_probs=78.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|++ |+++.++|+.....+..+-+++|+.... + .+ +.+.-.+.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f-~--~i----------------------~~~~~~~K 137 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFF-D--GI----------------------YGSSPEAP 137 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGC-S--EE----------------------EEECSSCC
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhe-e--ee----------------------ecCCCCCC
Confidence 467899999999999 9999999998888888888888885311 0 00 11111122
Q ss_pred hHHHHHH-HHhhcC---CEEEEEcCCcCChhhhhhcCc---ceecccc-cHHHh-hccCEEEcCCChhhHHH
Q 003103 573 HKYEIVK-RLQERK---HICGMTGDGVNDAPALKKADI---GIAVADA-TDAAR-SASDIVLTEPGLSVIIS 635 (847)
Q Consensus 573 qK~~iV~-~lq~~g---~~V~miGDG~ND~~aLk~AdV---GIamg~g-~~~a~-~aaDivl~~~~~~~i~~ 635 (847)
-|.++.+ .+++.| ..+.|+||+.||+.|.++|++ ++++|.+ .+..+ ..+|+++ +++..+..
T Consensus 138 p~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~--~~~~el~~ 207 (210)
T 2ah5_A 138 HKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIA--HKPLEVLA 207 (210)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEE--SSTTHHHH
T ss_pred CChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEE--CCHHHHHH
Confidence 3334433 334333 458999999999999999998 7777754 33333 3689988 45666554
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00014 Score=74.51 Aligned_cols=120 Identities=13% Similarity=0.145 Sum_probs=77.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhh
Q 003103 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (847)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~q 573 (847)
+.|++.+.++.|++.|+++.++|+.....+..+-+++|+. .. + ..+.+... .+-.|.-
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f-~-~~~~~~~~-------------------~~~Kp~p 168 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SF-D-FALGEKSG-------------------IRRKPAP 168 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TC-S-EEEEECTT-------------------SCCTTSS
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ce-e-EEEecCCC-------------------CCCCCCH
Confidence 5689999999999999999999999888888888888874 21 1 11110000 0011211
Q ss_pred H--HHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc---eeccccc--HHHhhccCEEEcCCChhhHHHHH
Q 003103 574 K--YEIVKRLQERKHICGMTGDGVNDAPALKKADIG---IAVADAT--DAARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 574 K--~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG---Iamg~g~--~~a~~aaDivl~~~~~~~i~~~i 637 (847)
. ..+.+.+.-....+.|+||+.||..|.+.|++. +++|.+. +.....+|.++ +++..+...+
T Consensus 169 ~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~--~~~~el~~~l 237 (240)
T 2hi0_A 169 DMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIV--DTAEKLEEAI 237 (240)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEE--CSHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEE--CCHHHHHHHh
Confidence 1 122233322334589999999999999999994 4555332 23334689888 5677766544
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00014 Score=71.79 Aligned_cols=136 Identities=15% Similarity=0.079 Sum_probs=87.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCH---HHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQL---AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~---~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 568 (847)
-++.|++.++++.|+++|+++.++|+-.. ..+..+.+.+|+.... + ..+...+... ..-...
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~f-d-~i~~~~~~~~-------------~~~~~K 97 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYF-D-FIYASNSELQ-------------PGKMEK 97 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGE-E-EEEECCTTSS-------------TTCCCT
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhhe-E-EEEEcccccc-------------ccCCCC
Confidence 36789999999999999999999998765 7888888999984311 0 0000000000 000111
Q ss_pred eChhhHHHHHHHHhhcCCEEEEEcCC-cCChhhhhhcCcceec-ccccHH-----H-hhccCEEEcCCChhhHHHHHHHH
Q 003103 569 VFPEHKYEIVKRLQERKHICGMTGDG-VNDAPALKKADIGIAV-ADATDA-----A-RSASDIVLTEPGLSVIISAVLTS 640 (847)
Q Consensus 569 ~sP~qK~~iV~~lq~~g~~V~miGDG-~ND~~aLk~AdVGIam-g~g~~~-----a-~~aaDivl~~~~~~~i~~~i~~g 640 (847)
-.|+--..+.+.+.-....+.|+||+ .+|..+-++|++.... ..+... . ...+|.++.+.++..+.+++...
T Consensus 98 P~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~ 177 (189)
T 3ib6_A 98 PDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLL 177 (189)
T ss_dssp TSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHHH
Confidence 12333334444444344568999999 7999999999986543 332211 1 12678998666899999988775
Q ss_pred HH
Q 003103 641 RA 642 (847)
Q Consensus 641 R~ 642 (847)
+.
T Consensus 178 ~~ 179 (189)
T 3ib6_A 178 KK 179 (189)
T ss_dssp HH
T ss_pred HH
Confidence 54
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.36 E-value=9.3e-05 Score=72.35 Aligned_cols=105 Identities=12% Similarity=0.013 Sum_probs=67.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeC--h
Q 003103 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF--P 571 (847)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~s--P 571 (847)
+.|++.+.++.|++.|+++.++|++.. .+....++.|+.... . ..+.+.. +.+.. |
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f-~-~~~~~~~-------------------~~~~kp~~ 140 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYF-T-EVVTSSS-------------------GFKRKPNP 140 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGE-E-EEECGGG-------------------CCCCTTSC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhhe-e-eeeeccc-------------------cCCCCCCH
Confidence 578999999999999999999998764 466677777774210 0 0000000 01111 2
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccC
Q 003103 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD 622 (847)
Q Consensus 572 ~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaD 622 (847)
+--..+.+.+.-. .+.++||+.||.+|++.|++++++.+.....++..+
T Consensus 141 ~~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~ 189 (190)
T 2fi1_A 141 ESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLD 189 (190)
T ss_dssp HHHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHT
T ss_pred HHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEECCCCChhhccC
Confidence 2222333333222 688999999999999999999888644444444443
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.0002 Score=72.40 Aligned_cols=122 Identities=13% Similarity=0.112 Sum_probs=80.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|++ |+++.++|+..........+.++-. .+ ..+.+ + +. ....-.|+
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~~---fd-~i~~~---------~---~~-----~~~KP~~~ 156 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGVE---FD-HIITA---------Q---DV-----GSYKPNPN 156 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCSC---CS-EEEEH---------H---HH-----TSCTTSHH
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCCc---cC-EEEEc---------c---cc-----CCCCCCHH
Confidence 678999999999999 8999999998887766665543311 00 00000 0 00 01122344
Q ss_pred hHHHHHHHHhhc---CCEEEEEcCCc-CChhhhhhcCcceeccccc-----------HHHhhccCEEEcCCChhhHHHHH
Q 003103 573 HKYEIVKRLQER---KHICGMTGDGV-NDAPALKKADIGIAVADAT-----------DAARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 573 qK~~iV~~lq~~---g~~V~miGDG~-ND~~aLk~AdVGIamg~g~-----------~~a~~aaDivl~~~~~~~i~~~i 637 (847)
-....++.+++. ...+.|+||+. ||..|.++|+++++|.+.. +..+..+|+++ +++..+.+.+
T Consensus 157 ~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~--~~~~el~~~l 234 (240)
T 3smv_A 157 NFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRF--NSMGEMAEAH 234 (240)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEE--SSHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEe--CCHHHHHHHH
Confidence 333443334443 35688999996 9999999999999994321 23447899998 6788887766
Q ss_pred H
Q 003103 638 L 638 (847)
Q Consensus 638 ~ 638 (847)
.
T Consensus 235 ~ 235 (240)
T 3smv_A 235 K 235 (240)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00015 Score=75.50 Aligned_cols=67 Identities=25% Similarity=0.303 Sum_probs=54.0
Q ss_pred hhHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 572 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 572 ~qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
..|...++.+.++ | ..+.++||+.||.+|++.|++|++|+++.+..++.||+++.+.+-.++.++++
T Consensus 186 ~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~ 256 (261)
T 2rbk_A 186 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMK 256 (261)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccHHHHhhCCEEeccCchhhHHHHHH
Confidence 3677766666543 3 45889999999999999999999999888888999999987665556877765
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00044 Score=71.02 Aligned_cols=117 Identities=14% Similarity=0.032 Sum_probs=79.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh-
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP- 571 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP- 571 (847)
++.|++.+.++.|+ .|+++.++|+.....+....+..|+.... + .+++.-.|
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f-~-------------------------~i~~~~kp~ 164 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLF-P-------------------------RIEVVSEKD 164 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTC-C-------------------------CEEEESCCS
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhC-c-------------------------eeeeeCCCC
Confidence 45799999999999 99999999999988888888888874211 0 12222223
Q ss_pred -hhHHHHHHHHhhcCCEEEEEcCCc-CChhhhhhcCcceecc-cccH--------HHhhccCE-EEcCCChhhHHHHHH
Q 003103 572 -EHKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIGIAVA-DATD--------AARSASDI-VLTEPGLSVIISAVL 638 (847)
Q Consensus 572 -~qK~~iV~~lq~~g~~V~miGDG~-ND~~aLk~AdVGIamg-~g~~--------~a~~aaDi-vl~~~~~~~i~~~i~ 638 (847)
+--..+.+.+.-....+.++||+. ||..|.+.|++++++- .|.. .....+|. ++ +++..+...+.
T Consensus 165 ~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~~l~ 241 (251)
T 2pke_A 165 PQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREV--PDPSGWPAAVR 241 (251)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEEC--SSGGGHHHHHH
T ss_pred HHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeee--CCHHHHHHHHH
Confidence 222333344433345689999999 9999999999998763 3321 11345787 66 66888777664
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00013 Score=75.94 Aligned_cols=124 Identities=14% Similarity=0.169 Sum_probs=81.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.++++.|++.|+++.++|+.... ...+-+.+|+.... + ..+.+ + +. -...-.|+
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f-~-~~~~~-~-----------~~-----~~~Kp~~~ 165 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHF-D-FVLTS-E-----------AA-----GWPKPDPR 165 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGC-S-CEEEH-H-----------HH-----SSCTTSHH
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhh-h-EEEee-c-----------cc-----CCCCCCHH
Confidence 35789999999999999999999987664 57777888874311 0 00000 0 00 01112233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCc-CChhhhhhcCcceeccc-ccH--H---HhhccCEEEcCCChhhHHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIGIAVAD-ATD--A---ARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~-ND~~aLk~AdVGIamg~-g~~--~---a~~aaDivl~~~~~~~i~~~i~ 638 (847)
--..+.+.+.-....+.|+||+. ||..|.++|+++.++.+ +.. . ....+|+++ +++..+...+.
T Consensus 166 ~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~--~~l~el~~~l~ 236 (263)
T 3k1z_A 166 IFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHIL--PSLAHLLPALD 236 (263)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEE--SSGGGHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEe--CCHHHHHHHHH
Confidence 33444444443445689999997 99999999999999853 221 1 223689988 67888887765
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0007 Score=66.67 Aligned_cols=99 Identities=14% Similarity=0.115 Sum_probs=67.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|++.| ++.++|+........+.+.+|+.... + ..+.+. +. -...-.|+
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f-~-~~~~~~------------~~-----~~~Kp~~~ 145 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFL-L-AFFTSS------------AL-----GVMKPNPA 145 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTC-S-CEEEHH------------HH-----SCCTTCHH
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhc-c-eEEeec------------cc-----CCCCCCHH
Confidence 36799999999999999 99999999998888888888874311 0 000000 00 01111233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecc
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA 611 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg 611 (847)
--..+.+.+.-....+.|+||+.||..|.+.|++...+-
T Consensus 146 ~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~ 184 (200)
T 3cnh_A 146 MYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQC 184 (200)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEE
Confidence 323344444433456889999999999999999988774
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.00022 Score=71.04 Aligned_cols=101 Identities=6% Similarity=-0.012 Sum_probs=65.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH------cCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeE
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR------LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGF 566 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~------~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 566 (847)
++.|++.+.++.|++ |+++.++|+........+.+. .|+.... + ..+.+ ++. -.
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f-~-~~~~~------------~~~-----~~ 148 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFF-D-KVYAS------------CQM-----GK 148 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGS-S-EEEEH------------HHH-----TC
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHc-C-eEEee------------ccc-----CC
Confidence 467899999999999 999999999888777766665 4553210 0 00000 000 00
Q ss_pred EEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccc
Q 003103 567 AGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADA 613 (847)
Q Consensus 567 ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g 613 (847)
..-.|+--..+.+.+.-....+.|+||+.||..|.+.|+++..+.++
T Consensus 149 ~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~ 195 (211)
T 2i6x_A 149 YKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDN 195 (211)
T ss_dssp CTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCT
T ss_pred CCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECC
Confidence 11122222334444433345688999999999999999999988743
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=96.73 E-value=0.011 Score=56.73 Aligned_cols=131 Identities=12% Similarity=0.093 Sum_probs=79.3
Q ss_pred cccCceEEEEEeeeeccc--CCChHHHHHHHHHhccccCcchHHHHHHHhcCChHHH--hccceEEEeecCCCCCcceEE
Q 003103 339 LTLNKLTVDRNLIEVFAK--GVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEA--RAGVREVHFLPFNPVDKRTAL 414 (847)
Q Consensus 339 LT~~~m~v~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~--~~~~~~~~~~pf~s~~k~~~v 414 (847)
||+|+|+|.++.. +.. +.+.++++.+++..+..+. ||+..|+++++...... .......+.+|- +. ...
T Consensus 1 LT~G~p~V~~v~~--~~~~~~~~~~~lL~laaslE~~Se-HPlA~AIv~~a~~~~~~~~~~~~~~f~~i~G---~G-v~a 73 (165)
T 2arf_A 1 AGHMVPRVMRVLL--LGDVATLPLRKVLAVVGTAEASSE-HPLGVAVTKYCKEELGTETLGYCTDFQAVPG---CG-IGC 73 (165)
T ss_dssp CCCCCCCEEEEEE--CCCTTTSCHHHHHHHHHHHHTTSC-STTHHHHHHHHHHHHTCCCCCCEEEEEEETT---TE-EEE
T ss_pred CCCceeEEEEEEe--eCCcCCCCHHHHHHHHHHHHccCC-ChHHHHHHHHHHHhcCCCCCCCcCceEEecC---cc-EEE
Confidence 8999999998753 221 2466788888888877666 99999999876422000 011223333332 11 222
Q ss_pred EEEcC------------------------------CCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEE
Q 003103 415 TYIDS------------------------------DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLG 464 (847)
Q Consensus 415 ~~~~~------------------------------~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~ 464 (847)
.+... ..+.+.+.-|+++.+.+..-. ..+.+.+.+..+..+|..++.
T Consensus 74 ~v~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi~---~~~~~~~~~~~~~~~G~T~v~ 150 (165)
T 2arf_A 74 KVSNVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGLT---ISSDVSDAMTDHEMKGQTAIL 150 (165)
T ss_dssp EEECHHHHHSCCCCCCCCCCCCSSSSCCCCCCCCCCCCEEEEEEECHHHHHHHHCS---SCHHHHHHHHHHHTTTSEEEE
T ss_pred EEcCcccccccccccccccccccccccccccccccCCCceEEEEcCHHHHHhcCCC---CCHHHHHHHHHHHhCCCeEEE
Confidence 22211 012245677999987653211 112334455667778998999
Q ss_pred EEeeecCCCCCCCCCCCceEEEEecccC
Q 003103 465 VARQEIPEKTKESPGAPWQLVGLLPLFD 492 (847)
Q Consensus 465 ~a~~~~~~~~~~~~e~~l~~lG~i~~~D 492 (847)
+|... .++|++++.|
T Consensus 151 va~dg-------------~~~g~i~l~D 165 (165)
T 2arf_A 151 VAIDG-------------VLCGMIAIAD 165 (165)
T ss_dssp EEETT-------------EEEEEEEECC
T ss_pred EEECC-------------EEEEEEEEEC
Confidence 99865 7999999987
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0025 Score=66.10 Aligned_cols=123 Identities=11% Similarity=0.130 Sum_probs=79.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.++++.|++ ++++.++|+.....+..+.+.+|+.... + ..+.+.+.. ..+-.|+
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f-~-~i~~~~~~~-----------------~~KP~p~ 180 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYF-D-AIVIGGEQK-----------------EEKPAPS 180 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGC-S-EEEEGGGSS-----------------SCTTCHH
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhh-h-eEEecCCCC-----------------CCCCCHH
Confidence 567999999999998 5999999999988888888899985321 0 011110000 0111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCC-cCChhhhhhcCc--ceecccccH---HHhhccCEEEcCCChhhHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDG-VNDAPALKKADI--GIAVADATD---AARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG-~ND~~aLk~AdV--GIamg~g~~---~a~~aaDivl~~~~~~~i~~~i 637 (847)
--..+.+.+.-....+.|+||. .||..+-++|++ .|.+..+.. .....+|+++ +++..+...+
T Consensus 181 ~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i--~~~~el~~~l 249 (260)
T 2gfh_A 181 IFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALL 249 (260)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHH
T ss_pred HHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEE--CCHHHHHHHH
Confidence 2233334443334568899995 999999999999 577753321 1234688887 5677776655
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0036 Score=62.33 Aligned_cols=96 Identities=17% Similarity=0.121 Sum_probs=64.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.++++.|++.|+++.++|+.+...+...-+.+|+.... + ..+...+. -...-.|+
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~f-d-~~~~~~~~-----------------~~~KP~p~ 144 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYF-D-VMVFGDQV-----------------KNGKPDPE 144 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC-S-EEECGGGS-----------------SSCTTSTH
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccc-c-cccccccc-----------------CCCcccHH
Confidence 35789999999999999999999999999999999999985321 0 00100000 00111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG 607 (847)
-=....+.+.-....+.|+||..+|..+-++|++.
T Consensus 145 ~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~ 179 (216)
T 3kbb_A 145 IYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIE 179 (216)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCC
T ss_pred HHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCc
Confidence 22233334433345688999999999999999984
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0059 Score=60.40 Aligned_cols=117 Identities=10% Similarity=0.033 Sum_probs=72.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.++++.|++.|+++.++||.....+..+.. .. ....+.+.+. .+-.|.
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~~----~d~v~~~~~~-------------------~~~KP~ 89 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---PV----NDWMIAAPRP-------------------TAGWPQ 89 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---TT----TTTCEECCCC-------------------SSCTTS
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---cc----CCEEEECCcC-------------------CCCCCC
Confidence 567999999999999999999999998877654443 10 0111111000 011121
Q ss_pred hHHHHHHHHhhcC----CEEEEEcCCcCChhhhhhcCc-ceeccccc---------------------------HHHhhc
Q 003103 573 HKYEIVKRLQERK----HICGMTGDGVNDAPALKKADI-GIAVADAT---------------------------DAARSA 620 (847)
Q Consensus 573 qK~~iV~~lq~~g----~~V~miGDG~ND~~aLk~AdV-GIamg~g~---------------------------~~a~~a 620 (847)
- .-+.+.+++.| ..+.||||..+|+.+-++|++ .|++..|. +.....
T Consensus 90 p-~~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~ 168 (196)
T 2oda_A 90 P-DACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLG 168 (196)
T ss_dssp T-HHHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTT
T ss_pred h-HHHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcC
Confidence 1 22333444332 458899999999999999997 44443221 011235
Q ss_pred cCEEEcCCChhhHHHHHH
Q 003103 621 SDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 621 aDivl~~~~~~~i~~~i~ 638 (847)
+|+++ +++..+...+.
T Consensus 169 ~d~vi--~~~~eL~~~l~ 184 (196)
T 2oda_A 169 VHSVI--DHLGELESCLA 184 (196)
T ss_dssp CSEEE--SSGGGHHHHHH
T ss_pred CCEEe--CCHHHHHHHHH
Confidence 89988 67888877664
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.64 E-value=0.00035 Score=70.45 Aligned_cols=106 Identities=20% Similarity=0.077 Sum_probs=61.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCCCCCCCCCcccCccccccCCcchH
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPV 556 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~---------------~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~ 556 (847)
.++.|++.++++.|++.|+++.++|+... ..+....+++|+.-...-.... +.. ..+.
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~-~~~--g~~~---- 127 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAY-HEA--GVGP---- 127 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECC-CTT--CCST----
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCceeeEEEeec-CCC--Ccee----
Confidence 56789999999999999999999999887 5677778888863100000000 000 0000
Q ss_pred HHHHHhcCeEEEeChhh--HHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcce
Q 003103 557 DELIEKADGFAGVFPEH--KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (847)
Q Consensus 557 ~~~~~~~~v~ar~sP~q--K~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGI 608 (847)
+. ..-...-.|.- =..+.+.+.-....+.|+||+.||..+.+.|++..
T Consensus 128 -~~---~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~ 177 (218)
T 2o2x_A 128 -LA---IPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQ 177 (218)
T ss_dssp -TC---CSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSE
T ss_pred -ec---ccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCE
Confidence 00 00000001211 11122222222345889999999999999999764
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0013 Score=72.22 Aligned_cols=135 Identities=14% Similarity=0.091 Sum_probs=80.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.||+.++++.|+++|+++.++|+.....+..+-+..|+.........+.+.+... -.+..... .-+..|.
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~------~~~~~~~~--kp~~KP~ 286 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLE------AENMYPQA--RPLGKPN 286 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHH------HHHHSTTS--CCCCTTS
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEecccccc------cccccccc--cCCCCCC
Confidence 678999999999999999999999999988888888999853211001111110000 00000000 0001122
Q ss_pred hHHHHHHHHhhc-----------------CCEEEEEcCCcCChhhhhhcCcc-eeccccc-------HHHhhccCEEEcC
Q 003103 573 HKYEIVKRLQER-----------------KHICGMTGDGVNDAPALKKADIG-IAVADAT-------DAARSASDIVLTE 627 (847)
Q Consensus 573 qK~~iV~~lq~~-----------------g~~V~miGDG~ND~~aLk~AdVG-Iamg~g~-------~~a~~aaDivl~~ 627 (847)
-.. +...+++. ...+.|+||+.+|..|-++|++. |++..|. +.....||+++
T Consensus 287 P~~-~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi-- 363 (384)
T 1qyi_A 287 PFS-YIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI-- 363 (384)
T ss_dssp THH-HHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEE--
T ss_pred HHH-HHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEE--
Confidence 111 12233322 25688999999999999999975 3343321 22234689998
Q ss_pred CChhhHHHHHH
Q 003103 628 PGLSVIISAVL 638 (847)
Q Consensus 628 ~~~~~i~~~i~ 638 (847)
+++..+...+.
T Consensus 364 ~sl~eL~~~l~ 374 (384)
T 1qyi_A 364 NHLGELRGVLD 374 (384)
T ss_dssp SSGGGHHHHHS
T ss_pred CCHHHHHHHHH
Confidence 66888877653
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.44 E-value=0.0044 Score=62.15 Aligned_cols=118 Identities=19% Similarity=0.202 Sum_probs=72.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|++. +++.++|+.... -+.+|+.... + .+... +.. -...-.|+
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f-~--~~~~~-----------~~~-----~~~kp~~~ 159 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYF-A--FALCA-----------EDL-----GIGKPDPA 159 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGC-S--EEEEH-----------HHH-----TCCTTSHH
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHe-e--eeEEc-----------ccc-----CCCCcCHH
Confidence 4678999999999998 999999987654 2344442110 0 00000 000 00111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCc-CChhhhhhcCcceec-c---cccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIGIAV-A---DATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~-ND~~aLk~AdVGIam-g---~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
--..+.+.+.-....+.|+||+. ||..|.+.|+++.++ . ...+. ...+|+++ +++..+.+.+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~--~~l~el~~~l~ 227 (230)
T 3vay_A 160 PFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEI--HNLSQLPEVLA 227 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEE--SSGGGHHHHHH
T ss_pred HHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeE--CCHHHHHHHHH
Confidence 22333344433345688999998 999999999998877 2 22222 56789998 67888887664
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.39 E-value=0.001 Score=69.22 Aligned_cols=58 Identities=19% Similarity=0.282 Sum_probs=47.5
Q ss_pred hhHHHHHHHHh-hcCCEEEEEcC----CcCChhhhhhcC-cceecccccHHHhhccCEEEcCCC
Q 003103 572 EHKYEIVKRLQ-ERKHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARSASDIVLTEPG 629 (847)
Q Consensus 572 ~qK~~iV~~lq-~~g~~V~miGD----G~ND~~aLk~Ad-VGIamg~g~~~a~~aaDivl~~~~ 629 (847)
-.|..-++.|. -....|+++|| |.||.+||+.|+ +|++|+++.+..++.||+|..+++
T Consensus 196 vsKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~a~~v~~~~~ 259 (262)
T 2fue_A 196 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFFPETA 259 (262)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHCTTC-
T ss_pred CCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHhhheeCCCCc
Confidence 36888888881 11357999999 999999999999 599999999999999999875543
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=96.28 E-value=0.0046 Score=63.61 Aligned_cols=84 Identities=15% Similarity=0.072 Sum_probs=63.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEE
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQL----AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~----~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a 567 (847)
.++.|++.+.++.|++.|+++.++||-.. ..+..-.+++||.... . ..++-
T Consensus 100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~--~-----------------------~~Lil 154 (260)
T 3pct_A 100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVN--D-----------------------KTLLL 154 (260)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCS--T-----------------------TTEEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccc--c-----------------------ceeEe
Confidence 56789999999999999999999999754 4666677888985310 0 01344
Q ss_pred EeChhhHHHHHHHHhhc-CCEEEEEcCCcCChhh
Q 003103 568 GVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPA 600 (847)
Q Consensus 568 r~sP~qK~~iV~~lq~~-g~~V~miGDG~ND~~a 600 (847)
|-....|....+.+++. -.+|+++||..+|.++
T Consensus 155 r~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 155 KKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp ESSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred cCCCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 43346788888888874 4578999999999986
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.28 E-value=0.002 Score=58.97 Aligned_cols=96 Identities=16% Similarity=0.153 Sum_probs=61.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.++++.|++.|+++.++|+.....+..+.+++|+.... . ..+... +. ...+-.|+
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f-~-~i~~~~------------~~-----~~~Kp~~~ 78 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVV-D-KVLLSG------------EL-----GVEKPEEA 78 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSS-S-EEEEHH------------HH-----SCCTTSHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhc-c-EEEEec------------cC-----CCCCCCHH
Confidence 46688999999999999999999999887777777788764311 0 000000 00 00111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG 607 (847)
--..+.+.+.-....+.|+||+.+|..+.++|++-
T Consensus 79 ~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~ 113 (137)
T 2pr7_A 79 AFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLV 113 (137)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCE
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCE
Confidence 22233333332334588999999999999999874
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.24 E-value=0.00023 Score=70.48 Aligned_cols=94 Identities=5% Similarity=-0.030 Sum_probs=59.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-cCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEE----
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA---- 567 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~-~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a---- 567 (847)
++.|++.+.++.|++.|+++.++|+........+.+. .|+ ..... .+++
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l------------------------~~~f~--~~~~~~~~ 144 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEI------------------------RDAAD--HIYLSQDL 144 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHH------------------------HHHCS--EEEEHHHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccCh------------------------hhhee--eEEEeccc
Confidence 4578999999999999999999998654332221111 121 11110 0111
Q ss_pred -Ee--ChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceeccc
Q 003103 568 -GV--FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD 612 (847)
Q Consensus 568 -r~--sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~ 612 (847)
.. .|+--..+.+.+.-....+.|+||+.||..|.+.|++...+.+
T Consensus 145 ~~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~ 192 (206)
T 2b0c_A 145 GMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVK 192 (206)
T ss_dssp TCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECC
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEec
Confidence 11 2223334444444344568899999999999999999887753
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.21 E-value=0.0042 Score=64.41 Aligned_cols=43 Identities=19% Similarity=0.283 Sum_probs=35.0
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCCC
Q 003103 491 FDPPRHDSAETIRRALNLGVNVKMITG---DQLAIGKETGRRLGMG 533 (847)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTG---D~~~tA~~iA~~~Gi~ 533 (847)
.+.+-|++.++|++++++|++++++|| ..........+++|+.
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~ 67 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE 67 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence 455668899999999999999999999 5666666666777874
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.10 E-value=0.0014 Score=67.27 Aligned_cols=52 Identities=19% Similarity=0.262 Sum_probs=41.7
Q ss_pred hHHHHHHHH-hhcCCEEEEEcC----CcCChhhhhhcCc-ceecccccHHHhhccCEE
Q 003103 573 HKYEIVKRL-QERKHICGMTGD----GVNDAPALKKADI-GIAVADATDAARSASDIV 624 (847)
Q Consensus 573 qK~~iV~~l-q~~g~~V~miGD----G~ND~~aLk~AdV-GIamg~g~~~a~~aaDiv 624 (847)
.|..-++.+ .-....|+++|| |.||.+||+.|+. |++|+++.+..|+.||+|
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICELLF 245 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHHHHC
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHHHHHHHhhc
Confidence 677767666 112357999999 9999999999987 999999999999999876
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.00 E-value=0.011 Score=61.00 Aligned_cols=42 Identities=12% Similarity=0.090 Sum_probs=33.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCCC
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITG---DQLAIGKETGRRLGMG 533 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTG---D~~~tA~~iA~~~Gi~ 533 (847)
+.+-++++++|++++++|++++++|| ..........+++|+.
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~ 65 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIP 65 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 33447899999999999999999998 5666666677788874
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=95.94 E-value=0.0052 Score=63.25 Aligned_cols=85 Identities=14% Similarity=0.048 Sum_probs=62.9
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeE
Q 003103 491 FDPPRHDSAETIRRALNLGVNVKMITGDQL----AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGF 566 (847)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~----~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 566 (847)
++++.|++.+.++.|++.|+++.++||-.. ..+..-.+++||... ... .++
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~--~~~-----------------------~Li 153 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGV--EES-----------------------AFY 153 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCC--SGG-----------------------GEE
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcc--ccc-----------------------cee
Confidence 367789999999999999999999998754 466666778898531 000 133
Q ss_pred EEeChhhHHHHHHHHhhcC-CEEEEEcCCcCChhh
Q 003103 567 AGVFPEHKYEIVKRLQERK-HICGMTGDGVNDAPA 600 (847)
Q Consensus 567 ar~sP~qK~~iV~~lq~~g-~~V~miGDG~ND~~a 600 (847)
-|-.-..|....+.+++.| .+|+++||-.+|.++
T Consensus 154 lr~~~~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 154 LKKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp EESSCSCCHHHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred ccCCCCChHHHHHHHHhcCCCEEEEECCChHHhcc
Confidence 3433356777778887774 578999999999885
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=95.84 E-value=0.004 Score=62.79 Aligned_cols=102 Identities=10% Similarity=-0.009 Sum_probs=64.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH------cCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeE
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR------LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGF 566 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~------~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 566 (847)
++.|++.++++.|++. +++.++|+.....+..+.+. .|+.... + ..+. . ++. -.
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~f-d-~i~~---------~---~~~-----~~ 171 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYF-E-KTYL---------S---YEM-----KM 171 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHC-S-EEEE---------H---HHH-----TC
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhC-C-EEEe---------e---ccc-----CC
Confidence 4669999999999999 99999999998877766533 3431100 0 0000 0 000 01
Q ss_pred EEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceeccccc
Q 003103 567 AGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADAT 614 (847)
Q Consensus 567 ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~ 614 (847)
.+-.|+-=..+.+.+.-....+.|+||+.||..|.++|+++..+.++.
T Consensus 172 ~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~ 219 (229)
T 4dcc_A 172 AKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAG 219 (229)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTT
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCH
Confidence 112233333444444434456889999999999999999998886443
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=95.75 E-value=0.013 Score=59.10 Aligned_cols=114 Identities=11% Similarity=0.104 Sum_probs=71.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.++++.|++.| ++.++|+-....+..+.+++|+.... .. .+... .
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f------------------------~~-~~~~~---~ 146 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEV------------------------EG-RVLIY---I 146 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHT------------------------TT-CEEEE---S
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhc------------------------Ce-eEEec---C
Confidence 57899999999999999 99999999888888888888873210 00 01111 1
Q ss_pred hHHHHHHHHhh--cCCEEEEEcCCcC---ChhhhhhcCcc-eecccc----c-HHHhhc--cCEEEcCCChhhHHHHH
Q 003103 573 HKYEIVKRLQE--RKHICGMTGDGVN---DAPALKKADIG-IAVADA----T-DAARSA--SDIVLTEPGLSVIISAV 637 (847)
Q Consensus 573 qK~~iV~~lq~--~g~~V~miGDG~N---D~~aLk~AdVG-Iamg~g----~-~~a~~a--aDivl~~~~~~~i~~~i 637 (847)
.|..+.+.+.+ ....+.|+||+.| |..+-+.|++- |.+..| . +..++. +|.++ +++..+...+
T Consensus 147 ~K~~~~~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i--~~~~el~~~l 222 (231)
T 2p11_A 147 HKELMLDQVMECYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTV--ERIGDLVEMD 222 (231)
T ss_dssp SGGGCHHHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEE--SSGGGGGGCG
T ss_pred ChHHHHHHHHhcCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceee--cCHHHHHHHH
Confidence 23233333332 3457999999999 55555666653 233322 2 222332 89988 5566665443
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.71 E-value=0.0083 Score=60.05 Aligned_cols=95 Identities=11% Similarity=0.013 Sum_probs=59.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|++.|+++.++|+... .+..+.+.+|+.... + ..+.+. +. -..+-.|+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f-~-~~~~~~---------~~--------~~~Kp~~~ 154 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYF-D-ALALSY---------EI--------KAVKPNPK 154 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGC-S-EEC----------------------------CC
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHe-e-EEEecc---------cc--------CCCCCCHH
Confidence 4578999999999999999999998866 467788888874311 0 000000 00 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcC-ChhhhhhcCcceec
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVN-DAPALKKADIGIAV 610 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~N-D~~aLk~AdVGIam 610 (847)
--..+.+.+.-. . .|+||+.+ |..+-++|++....
T Consensus 155 ~~~~~~~~~~~~--~-~~vgD~~~~Di~~a~~aG~~~i~ 190 (220)
T 2zg6_A 155 IFGFALAKVGYP--A-VHVGDIYELDYIGAKRSYVDPIL 190 (220)
T ss_dssp HHHHHHHHHCSS--E-EEEESSCCCCCCCSSSCSEEEEE
T ss_pred HHHHHHHHcCCC--e-EEEcCCchHhHHHHHHCCCeEEE
Confidence 222233333222 2 89999999 99999999987554
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=95.60 E-value=0.013 Score=60.07 Aligned_cols=117 Identities=10% Similarity=0.097 Sum_probs=73.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
.++.|++.+.++.|++.|+++.+.|+-. .+..+-+.+|+.... + ..+.+.+.. ...-.|
T Consensus 115 ~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~F-d-~i~~~~~~~-----------------~~KP~p 173 (250)
T 4gib_A 115 NDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKF-D-FIADAGKCK-----------------NNKPHP 173 (250)
T ss_dssp GGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGC-S-EECCGGGCC-----------------SCTTSS
T ss_pred cccchhHHHHHHHHHhcccccccccccc--hhhhHhhhccccccc-c-eeecccccC-----------------CCCCcH
Confidence 3567999999999999999998877654 345667788885321 0 111110000 111123
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCc-ceecccccHHHhhccCEEEcCCChhhH
Q 003103 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLTEPGLSVI 633 (847)
Q Consensus 572 ~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIamg~g~~~a~~aaDivl~~~~~~~i 633 (847)
+-=....+.+.-....+.|+||..+|..|-++|++ .|++++..+. ..||+++ +++..+
T Consensus 174 ~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~--~~ad~vi--~~l~eL 232 (250)
T 4gib_A 174 EIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNYENL--KKANLVV--DSTNQL 232 (250)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCTTTT--TTSSEEE--SSGGGC
T ss_pred HHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECChhHh--ccCCEEE--CChHhC
Confidence 32233344444334568899999999999999998 5566543332 3589998 556665
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.57 E-value=0.082 Score=54.07 Aligned_cols=40 Identities=23% Similarity=0.182 Sum_probs=34.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCC
Q 003103 494 PRHDSAETIRRALNLGVNVKMIT---GDQLAIGKETGRRLGMG 533 (847)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miT---GD~~~tA~~iA~~~Gi~ 533 (847)
+-+++.++++.+++.|+++..+| |..........+++|+.
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 55788999999999999999999 88888777777787774
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=94.91 E-value=0.05 Score=56.14 Aligned_cols=42 Identities=14% Similarity=0.000 Sum_probs=36.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCC
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMIT---GDQLAIGKETGRRLGMG 533 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miT---GD~~~tA~~iA~~~Gi~ 533 (847)
+++-+++.+++++|++.|++++++| |..........+++|+.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 5567889999999999999999999 88877777777888874
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=94.48 E-value=0.015 Score=56.25 Aligned_cols=103 Identities=12% Similarity=0.040 Sum_probs=60.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHcCCCCCCCCCCcccCc-cccccCCcch
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGD---------------QLAIGKETGRRLGMGTNMYPSSSLLGQ-DKDASIAALP 555 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD---------------~~~tA~~iA~~~Gi~~~~~~~~~~~~~-~~~~~~~~~~ 555 (847)
-++.|++.++++.|++.|+++.++|+- ....+..+.++.|+.- + ..+... .....
T Consensus 41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---d-~v~~s~~~~~~~----- 111 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQF---D-EVLICPHLPADE----- 111 (176)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCE---E-EEEEECCCGGGC-----
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCe---e-EEEEcCCCCccc-----
Confidence 357899999999999999999999997 4566777788888741 0 010000 00000
Q ss_pred HHHHHHhcCeEEEeChhhH--HHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc-eecccc
Q 003103 556 VDELIEKADGFAGVFPEHK--YEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADA 613 (847)
Q Consensus 556 ~~~~~~~~~v~ar~sP~qK--~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~g 613 (847)
.....|+.. ..+.+.+.-....+.||||..+|..+-++|++- |.+..+
T Consensus 112 ----------~~~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~ 162 (176)
T 2fpr_A 112 ----------CDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRE 162 (176)
T ss_dssp ----------CSSSTTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred ----------ccccCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCC
Confidence 000011100 001111211223478999999999999999885 444433
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=94.45 E-value=0.0078 Score=60.85 Aligned_cols=45 Identities=16% Similarity=0.155 Sum_probs=32.2
Q ss_pred CEEEEEcCC-cCChhhhhhcCcceec---cccc-HHHh---hccCEEEcCCChhh
Q 003103 586 HICGMTGDG-VNDAPALKKADIGIAV---ADAT-DAAR---SASDIVLTEPGLSV 632 (847)
Q Consensus 586 ~~V~miGDG-~ND~~aLk~AdVGIam---g~g~-~~a~---~aaDivl~~~~~~~ 632 (847)
..+.|+||+ .||..|++.|++++++ |.+. +..+ ..+|+++ +++..
T Consensus 194 ~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~--~~~~e 246 (250)
T 2c4n_A 194 EETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIY--PSVAE 246 (250)
T ss_dssp GGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEE--SSGGG
T ss_pred ceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEE--CCHHH
Confidence 468999999 6999999999998554 4333 3333 4689988 34443
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=94.05 E-value=0.031 Score=58.96 Aligned_cols=97 Identities=10% Similarity=-0.018 Sum_probs=65.6
Q ss_pred cccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHH---HHHHHH--------cCCCCCCCCCCcccCccccccCCcchHH
Q 003103 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIG---KETGRR--------LGMGTNMYPSSSLLGQDKDASIAALPVD 557 (847)
Q Consensus 489 ~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA---~~iA~~--------~Gi~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (847)
..++++.|++.++++.|++.|+++.++||-....+ ...-+. .|+.. ..+.+.+..
T Consensus 184 ~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~--------- 249 (301)
T 1ltq_A 184 CDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPL-----VMQCQREQG--------- 249 (301)
T ss_dssp GGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCC-----SEEEECCTT---------
T ss_pred ccccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCCc-----hheeeccCC---------
Confidence 34678899999999999999999999999874322 222333 57621 111111000
Q ss_pred HHHHhcCeEEEeChhhHHHHHHHHhhcC-CEEEEEcCCcCChhhhhhcCcc
Q 003103 558 ELIEKADGFAGVFPEHKYEIVKRLQERK-HICGMTGDGVNDAPALKKADIG 607 (847)
Q Consensus 558 ~~~~~~~v~ar~sP~qK~~iV~~lq~~g-~~V~miGDG~ND~~aLk~AdVG 607 (847)
-.+-.|+-|..+.+.+.... ..+.|+||..+|+.|-++|++-
T Consensus 250 --------~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~ 292 (301)
T 1ltq_A 250 --------DTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 292 (301)
T ss_dssp --------CCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred --------CCcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCe
Confidence 01233677777777775444 3468999999999999999874
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=93.73 E-value=0.058 Score=55.68 Aligned_cols=42 Identities=14% Similarity=0.173 Sum_probs=33.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCH---HHHHHHHHHcCCC
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQL---AIGKETGRRLGMG 533 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~---~tA~~iA~~~Gi~ 533 (847)
.++.|++.++++.|++.|+++.++||-.. ......-+.+|+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 35678999999999999999999999873 3344445677885
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=93.50 E-value=0.054 Score=57.89 Aligned_cols=116 Identities=13% Similarity=0.103 Sum_probs=71.0
Q ss_pred ccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc----CCCCCCCCCCcccCccccccC---Cc--chHHHHH
Q 003103 490 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL----GMGTNMYPSSSLLGQDKDASI---AA--LPVDELI 560 (847)
Q Consensus 490 ~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~----Gi~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~ 560 (847)
....+.|++.+.++.|+++|++|+++||-....++.+|..+ ||+. ..+.|....... .+ ....+..
T Consensus 140 ~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~-----e~ViG~~~~~~~~~~~~~~~~~~~~~ 214 (327)
T 4as2_A 140 EPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKP-----ENVIGVTTLLKNRKTGELTTARKQIA 214 (327)
T ss_dssp CCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCG-----GGEEEECEEEECTTTCCEECHHHHHH
T ss_pred cccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCH-----HHeEeeeeeeeccccccccccccccc
Confidence 34467899999999999999999999999999999999985 4532 222222110000 00 0000110
Q ss_pred H---------hcCeEEE-----eChhhHHHHHHHHhhc-CCEEEEEcCCc-CChhhhhh--cCcceec
Q 003103 561 E---------KADGFAG-----VFPEHKYEIVKRLQER-KHICGMTGDGV-NDAPALKK--ADIGIAV 610 (847)
Q Consensus 561 ~---------~~~v~ar-----~sP~qK~~iV~~lq~~-g~~V~miGDG~-ND~~aLk~--AdVGIam 610 (847)
. +..+-.+ +--+.|..-|+...+. ...+++.||+. .|.+||.. ++.|+++
T Consensus 215 dg~y~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L 282 (327)
T 4as2_A 215 EGKYDPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHL 282 (327)
T ss_dssp TTCCCGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEE
T ss_pred cccccccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEE
Confidence 0 0011111 1135687777766544 35789999994 79999965 4455444
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=93.35 E-value=0.016 Score=59.39 Aligned_cols=50 Identities=20% Similarity=0.202 Sum_probs=41.8
Q ss_pred hHHHHHHHHhhcCCEEEEEcC----CcCChhhhhhcC-cceecccccHHHhhccC
Q 003103 573 HKYEIVKRLQERKHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARSASD 622 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGD----G~ND~~aLk~Ad-VGIamg~g~~~a~~aaD 622 (847)
.|..-++.|.+...-|.++|| |.||.+||+.|+ +|++|+++.|..+..++
T Consensus 187 ~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~~~~~~~~ 241 (246)
T 3f9r_A 187 DKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKDTIAEVEK 241 (246)
T ss_dssp SGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHHHHHHHHH
T ss_pred CHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHHHHHHHHH
Confidence 788777777766678999999 799999999996 89999998888776543
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=93.30 E-value=0.039 Score=57.02 Aligned_cols=113 Identities=12% Similarity=0.031 Sum_probs=68.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc---CCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL---GMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~---Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 568 (847)
-++.|++.++++.|+++|+++.++|+-+...+..+-+.. |+.... + ..+ +. .+...
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~f-d-~i~-~~------------------~~~~K 187 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELV-D-GHF-DT------------------KIGHK 187 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGC-S-EEE-CG------------------GGCCT
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhc-c-EEE-ec------------------CCCCC
Confidence 367899999999999999999999998887776665543 353210 0 000 00 01111
Q ss_pred eChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc-eecc-ccc---HHHhhccCEEE
Q 003103 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVA-DAT---DAARSASDIVL 625 (847)
Q Consensus 569 ~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg-~g~---~~a~~aaDivl 625 (847)
-.|+-=..+.+.+.-....+.|+||..+|+.+-++|++- |.+. .+. +.....+|.++
T Consensus 188 P~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i 249 (261)
T 1yns_A 188 VESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLI 249 (261)
T ss_dssp TCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEE
T ss_pred CCHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEE
Confidence 112211233344433345689999999999999999974 3343 221 11223467776
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=93.22 E-value=0.089 Score=54.18 Aligned_cols=40 Identities=15% Similarity=0.100 Sum_probs=34.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCC
Q 003103 493 PPRHDSAETIRRALNLGVNVKMIT---GDQLAIGKETGRRLGMG 533 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miT---GD~~~tA~~iA~~~Gi~ 533 (847)
++ |+++++|++++++|++++++| |..........+++|+.
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~ 64 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVE 64 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 44 899999999999999999999 77777777777888874
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=90.42 E-value=0.093 Score=52.29 Aligned_cols=89 Identities=19% Similarity=0.213 Sum_probs=54.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHH----HHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEe
Q 003103 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKE----TGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (847)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~----iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 569 (847)
+.+++.+.++.|++.|+++.++|+-....+.. +.+..+... .+... ..+.+.
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~--------~~~~~----------------~~~~~~ 144 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA--------TNMNP----------------VIFAGD 144 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT--------TTBCC----------------CEECCC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccc--------cccch----------------hhhcCC
Confidence 46799999999999999999999986432222 222222210 00000 001111
Q ss_pred --ChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc-eec
Q 003103 570 --FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAV 610 (847)
Q Consensus 570 --sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iam 610 (847)
.|+-. .+.+++.|. +.|+||..+|..+-++|++- |.+
T Consensus 145 KP~p~~~---~~~~~~~g~-~l~VGDs~~Di~aA~~aG~~~i~v 184 (211)
T 2b82_A 145 KPGQNTK---SQWLQDKNI-RIFYGDSDNDITAARDVGARGIRI 184 (211)
T ss_dssp CTTCCCS---HHHHHHTTE-EEEEESSHHHHHHHHHTTCEEEEC
T ss_pred CCCHHHH---HHHHHHCCC-EEEEECCHHHHHHHHHCCCeEEEE
Confidence 23333 334444554 99999999999999999874 444
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=89.97 E-value=0.21 Score=50.66 Aligned_cols=108 Identities=8% Similarity=0.020 Sum_probs=65.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|++.|+++.++|+... +..+-+.+|+.... + ..+.+.+.. ..+-.|+
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~f-d-~i~~~~~~~-----------------~~KP~p~ 153 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFF-T-FCADASQLK-----------------NSKPDPE 153 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGC-S-EECCGGGCS-----------------SCTTSTH
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcccc-c-ccccccccc-----------------CCCCcHH
Confidence 5679999999999999999999997653 44556778875321 0 011110000 0111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCc-ceecccccHHHhhccCEEE
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVL 625 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIamg~g~~~a~~aaDivl 625 (847)
-=....+.+.-....+.|+||..+|+.|-++|++ .|+++.|. ..+|.++
T Consensus 154 ~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~----~~ad~~~ 203 (243)
T 4g9b_A 154 IFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGL----TGAQLLL 203 (243)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTTC----CSCSEEE
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCC----CcHHHhc
Confidence 1122233333334568999999999999999987 44455442 2466665
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=89.26 E-value=0.18 Score=51.17 Aligned_cols=119 Identities=15% Similarity=0.160 Sum_probs=65.2
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHH--HHHHhcCeEEEeCh
Q 003103 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD--ELIEKADGFAGVFP 571 (847)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~ar~sP 571 (847)
+.+++.++++.|+ .|+++ ++|+.....+.......|+. ..++ +..........-.|
T Consensus 123 ~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~Kp 180 (259)
T 2ho4_A 123 HYQLLNQAFRLLL-DGAPL-IAIHKARYYKRKDGLALGPG--------------------PFVTALEYATDTKAMVVGKP 180 (259)
T ss_dssp BHHHHHHHHHHHH-TTCCE-EESCCCSEEEETTEEEECSH--------------------HHHHHHHHHHTCCCEECSTT
T ss_pred CHHHHHHHHHHHH-CCCEE-EEECCCCcCcccCCcccCCc--------------------HHHHHHHHHhCCCceEecCC
Confidence 6688999999999 89999 88876532111111111110 0011 00111111222223
Q ss_pred hhHHHHHHH-HhhcC---CEEEEEcCCc-CChhhhhhcCccee-cccc---c-HHH--hhccCEEEcCCChhhHHHHHH
Q 003103 572 EHKYEIVKR-LQERK---HICGMTGDGV-NDAPALKKADIGIA-VADA---T-DAA--RSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 572 ~qK~~iV~~-lq~~g---~~V~miGDG~-ND~~aLk~AdVGIa-mg~g---~-~~a--~~aaDivl~~~~~~~i~~~i~ 638 (847)
|....+. +++.| ..+.|+||+. ||..|.+.|++-.. +..| . +.. ...+|+++ +++..+...+.
T Consensus 181 --~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~--~~l~~l~~~l~ 255 (259)
T 2ho4_A 181 --EKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTC--ESFPHAVDHIL 255 (259)
T ss_dssp --SHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEE--SCHHHHHHHHH
T ss_pred --CHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEE--CCHHHHHHHHH
Confidence 3333333 33333 4588999998 99999999997443 3333 1 111 24588887 67877776553
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=88.06 E-value=1 Score=47.26 Aligned_cols=43 Identities=16% Similarity=0.117 Sum_probs=34.1
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCC
Q 003103 491 FDPPRHDSAETIRRALNLGVNVKMIT---GDQLAIGKETGRRLGMG 533 (847)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miT---GD~~~tA~~iA~~~Gi~ 533 (847)
.+++-+++.+++++|++.|++++++| |..........+++|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 45566789999999999999999999 46666655566677774
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=85.24 E-value=0.045 Score=53.49 Aligned_cols=41 Identities=17% Similarity=0.191 Sum_probs=33.2
Q ss_pred CCCCcchHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCC
Q 003103 492 DPPRHDSAETIRRALNL-GVNVKMITGDQLAIGKETGRRLGM 532 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~a-GI~v~miTGD~~~tA~~iA~~~Gi 532 (847)
-++.|++.++++.|++. |+++.++|+-....+..+.+.+|+
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 36789999999999999 999999999876655555555554
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=83.37 E-value=0.67 Score=52.39 Aligned_cols=99 Identities=7% Similarity=-0.008 Sum_probs=55.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC---CHHHHHHHHHH-cCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGD---QLAIGKETGRR-LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD---~~~tA~~iA~~-~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 568 (847)
++.|++.++++.|++.|+++.++|+- .......+... .|+... .+ ..+.+.+. -..+
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~-fd-~i~~~~~~-----------------~~~K 160 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMH-FD-FLIESCQV-----------------GMVK 160 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTT-SS-EEEEHHHH-----------------TCCT
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhh-ee-EEEecccc-----------------CCCC
Confidence 56899999999999999999999985 11111111111 133210 00 01100000 0111
Q ss_pred eChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceec
Q 003103 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (847)
Q Consensus 569 ~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIam 610 (847)
-.|+-=..+.+.+.-....+.|+||..||..+.++|++....
T Consensus 161 P~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~ 202 (555)
T 3i28_A 161 PEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTIL 202 (555)
T ss_dssp TCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred CCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEE
Confidence 122222333344433345688999999999999999987655
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=81.24 E-value=1.2 Score=49.11 Aligned_cols=40 Identities=10% Similarity=0.108 Sum_probs=33.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCC------------HHHHHHHHHHcCCC
Q 003103 494 PRHDSAETIRRALNLGVNVKMITGDQ------------LAIGKETGRRLGMG 533 (847)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~------------~~tA~~iA~~~Gi~ 533 (847)
+-|++.++++.|+++|+++.++|+.. ...+..+.+++|+.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~ 139 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP 139 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC
Confidence 67999999999999999999999955 22366777888873
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=80.16 E-value=1.9 Score=39.72 Aligned_cols=40 Identities=15% Similarity=0.025 Sum_probs=33.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHcCCC
Q 003103 494 PRHDSAETIRRALNLGVNVKMITGDQ---LAIGKETGRRLGMG 533 (847)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~---~~tA~~iA~~~Gi~ 533 (847)
+-+++.++|+++++.|+++++.||.+ ...+....++.|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 34689999999999999999999987 45566777788875
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 847 | ||||
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 4e-29 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 2e-28 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 7e-28 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 4e-20 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 1e-18 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 4e-13 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 4e-10 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 4e-10 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 1e-07 | |
| d1k1ea_ | 177 | c.108.1.5 (A:) Probable phosphatase YrbI {Haemophi | 1e-07 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 1e-06 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 5e-06 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 1e-05 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 1e-05 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 2e-05 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 2e-04 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 2e-04 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 3e-04 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 3e-04 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 0.001 | |
| d2a29a1 | 136 | d.220.1.1 (A:316-451) Potassium-transporting ATPas | 0.004 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 111 bits (279), Expect = 4e-29
Identities = 59/156 (37%), Positives = 81/156 (51%), Gaps = 1/156 (0%)
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM-GTNMYPSSS 541
DPPR + +I+ + G+ V MITGD RR+G+ G N +
Sbjct: 10 TGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADR 69
Query: 542 LLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPAL 601
+ + E +A FA V P HK +IV+ LQ I MTGDGVNDAPAL
Sbjct: 70 AYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPAL 129
Query: 602 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 637
KKA+IGIA+ T A++AS++VL + S I++AV
Sbjct: 130 KKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAV 165
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 116 bits (290), Expect = 2e-28
Identities = 30/346 (8%), Positives = 80/346 (23%), Gaps = 37/346 (10%)
Query: 315 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV---DRNLIEVFAKG---------VEKEH 362
+ + + + + + + + ++ I K +
Sbjct: 26 VYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVF 85
Query: 363 VILLAARASRTENQD--AIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
I L + + + A + + + + L + + +
Sbjct: 86 SIHLIDILKKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKN 145
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
+ + A + + + + + A+ + + + + K+
Sbjct: 146 NIYAALEEFATTE----LHVSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIART 201
Query: 481 PWQLVGLLPLFDP--PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP 538
++ G + P + + G + + TG LG+
Sbjct: 202 TFKT-GYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEA 260
Query: 539 SSSLLGQD--------KDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGM 590
D A P A Y + K +
Sbjct: 261 DFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFI 320
Query: 591 TGDGVNDAPALKKADI-GIAVA-------DATDAARSASDIVLTEP 628
GD + D + +K I A + +D V+
Sbjct: 321 VGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHL 366
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 115 bits (290), Expect = 7e-28
Identities = 52/327 (15%), Positives = 100/327 (30%), Gaps = 93/327 (28%)
Query: 22 IPIEEVFEQLKCSRE-GLTSDEGAHRLHVFGPNKL-EEKKESKVLKFLGFMWNPLSWVME 79
EE S GLT D+ L +G N+L E+ +S + + L ++
Sbjct: 7 KSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILL 66
Query: 80 AAAIMAIAL---ANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPK 136
AA ++ L G + + I+++L+ N+ + +E NA NA AL
Sbjct: 67 LAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA 126
Query: 137 TKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKN 196
T+ D P +L E GE L
Sbjct: 127 TE-------------------------QDKTPLQQKLDE-----------FGEQL----- 145
Query: 197 PYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSI 256
++ +++ G V + + I
Sbjct: 146 -------------SKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFK---------I 183
Query: 257 AVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 316
AV L + IP +P V++ +A+G+ R++++ AI
Sbjct: 184 AVA-------------------------LAVAAIPEGLPAVITTCLALGTRRMAKKNAIV 218
Query: 317 KRMTAIEEMAGMDVLCSDKTGTLTLNK 343
+ + ++E + + ++
Sbjct: 219 RSLPSVETLGRAIYNNMKQFIRYLISS 245
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 85.1 bits (210), Expect = 4e-20
Identities = 41/155 (26%), Positives = 61/155 (39%), Gaps = 31/155 (20%)
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 542
D + + ++ +G+ V MITGD + R L + +
Sbjct: 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL-- 68
Query: 543 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 602
P K E VK+LQ K + GDG+NDAPAL
Sbjct: 69 ----------------------------PHQKSEEVKKLQ-AKEVVAFVGDGINDAPALA 99
Query: 603 KADIGIAVADATDAARSASDIVLTEPGLSVIISAV 637
+AD+GIAV +D A + DIVL L +++A+
Sbjct: 100 QADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAI 134
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 80.1 bits (197), Expect = 1e-18
Identities = 41/112 (36%), Positives = 57/112 (50%), Gaps = 17/112 (15%)
Query: 138 KVLRDGRWSEQ--DASILVPGDVISIKLGDIVPADARLLEGDP--LKIDQSALTGESLPV 193
KV R R S Q A +VPGD++ + +GD VPAD R+L L++DQS LTGES+ V
Sbjct: 4 KVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSV 63
Query: 194 TKNP-------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 232
K+ + +FSG+ G+ +V TGV T GK +
Sbjct: 64 IKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 67.2 bits (163), Expect = 4e-13
Identities = 28/148 (18%), Positives = 52/148 (35%), Gaps = 27/148 (18%)
Query: 377 DAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKR--TALTYIDSDGNWHRASKGA 430
DA ++A++ + ++ R +V + FN +K + D+ + KGA
Sbjct: 66 DASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGA 125
Query: 431 PEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT------ 474
PE+IL C+ ++++ + G R LG + +P
Sbjct: 126 PERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFK 185
Query: 475 -----KESPGAPWQLVGLLPLFDPPRHD 497
P VGL+ + D H
Sbjct: 186 FDTDELNFPTEKLCFVGLMSMIDHHHHH 213
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 58.8 bits (141), Expect = 4e-10
Identities = 33/190 (17%), Positives = 68/190 (35%), Gaps = 25/190 (13%)
Query: 305 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVI 364
G + + + + + E+A + LC+D + K G E +
Sbjct: 33 GEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETK-------GVYEKVGEATETAL 85
Query: 365 L-LAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNW 423
L + + + + + A R +++ L F+ K ++ + +
Sbjct: 86 TTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSR 145
Query: 424 HR-----ASKGAPEQILALCNCR----------EDVRKKVHAVIDKF--AERGLRSLGVA 466
KGAPE ++ CN V++K+ +VI ++ LR L +A
Sbjct: 146 AAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALA 205
Query: 467 RQEIPEKTKE 476
++ P K +E
Sbjct: 206 TRDTPPKREE 215
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 58.5 bits (140), Expect = 4e-10
Identities = 23/157 (14%), Positives = 46/157 (29%), Gaps = 6/157 (3%)
Query: 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIA 552
R E + + +I+G + +Y + + D
Sbjct: 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDY----- 129
Query: 553 ALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD 612
+ +D + K ++ L E M GD V D A K +D+ A
Sbjct: 130 -IHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDY 188
Query: 613 ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKN 649
+ R + L I + + + + ++N
Sbjct: 189 LLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQN 225
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.1 bits (121), Expect = 1e-07
Identities = 25/151 (16%), Positives = 45/151 (29%), Gaps = 13/151 (8%)
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
+ E + R V V +I+G +I + +L + ++
Sbjct: 70 EQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFAN 129
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHI--CGMTGDGVNDA 598
L E + K +++K L+E+ H M GDG D
Sbjct: 130 RLKFYFNG---------EYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDM 180
Query: 599 PALKKADIGIAVA--DATDAARSASDIVLTE 627
A AD I + + +T+
Sbjct: 181 EACPPADAFIGFGGNVIRQQVKDNAKWYITD 211
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Score = 50.1 bits (119), Expect = 1e-07
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629
++++K+ GD D PA AVADA ++A D VL+ G
Sbjct: 82 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHG 140
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 48.1 bits (113), Expect = 1e-06
Identities = 15/68 (22%), Positives = 23/68 (33%)
Query: 570 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629
+ + L + GDG ND A K +AVA A + +D V +
Sbjct: 153 KGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEY 212
Query: 630 LSVIISAV 637
A+
Sbjct: 213 GEGGAEAI 220
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 46.0 bits (108), Expect = 5e-06
Identities = 11/58 (18%), Positives = 17/58 (29%)
Query: 570 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
+ K + V + + GD ND L +A GI + R
Sbjct: 130 QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVH 187
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 45.2 bits (105), Expect = 1e-05
Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Query: 566 FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVL 625
E +I K GDG ND KKA + IA A + +DI +
Sbjct: 139 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICI 197
Query: 626 TEPGLSVIISAV 637
+ L I+ +
Sbjct: 198 EKRDLREILKYI 209
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 45.4 bits (106), Expect = 1e-05
Identities = 33/193 (17%), Positives = 56/193 (29%), Gaps = 55/193 (28%)
Query: 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDEL 559
E+IR A G+ V +++G+ + + LG+ ++ + + D D SI +E
Sbjct: 27 ESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEG 86
Query: 560 IEK---------------------ADGFAGVFPEHKYEIVKRLQERKHI----------- 587
K A + PE + K + R +
Sbjct: 87 TNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLM 146
Query: 588 -----------------------CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
+ GD ND P + A+ATD ++ SD V
Sbjct: 147 NRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDNIKAVSDFV 206
Query: 625 LTEPGLSVIISAV 637
I
Sbjct: 207 SDYSYGEEIGQIF 219
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 45.0 bits (105), Expect = 2e-05
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629
++K + GD ND L AVA+ATD+A+S + VL
Sbjct: 209 YTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSH 267
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 41.9 bits (97), Expect = 2e-04
Identities = 11/53 (20%), Positives = 22/53 (41%)
Query: 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
+ L + GD ND ++ A +G+AV +A + + ++ V
Sbjct: 200 TGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFV 252
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 41.8 bits (97), Expect = 2e-04
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 573 HKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
K + + + I GDG ND L+ A IG+A+ A + ++A+D V
Sbjct: 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYV 241
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 41.5 bits (96), Expect = 3e-04
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 592 GDGVNDAPALKKADIGIAVADATDAARSASDIV 624
GD +ND L+ A G+A+ +A + +S +D V
Sbjct: 236 GDSLNDKSMLEAAGKGVAMGNAREDIKSIADAV 268
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 41.5 bits (96), Expect = 3e-04
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 592 GDGVNDAPALKKADIGIAVADATDAARSASDIVLT---EPGLSVIISAVLTSRAIF 644
GD NDA LK A A+ +A + + + G +I AVL + F
Sbjct: 213 GDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTYPF 268
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 39.2 bits (90), Expect = 0.001
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
+ + +R+ +K + GD ND ++A + +A+ +A + + ASDIV
Sbjct: 193 KALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIV 245
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} Length = 136 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Score = 36.2 bits (83), Expect = 0.004
Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 17/140 (12%)
Query: 355 AKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTAL 414
A+GV+++ + A AS + +IV + R + F P ++ +
Sbjct: 10 AQGVDEKTLADAAQLASLADE-TPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRM 68
Query: 415 TYIDSDGNWHRASKGAPEQILALCNCRE-DVRKKVHAVIDKFAERGLRSLGVARQEIPEK 473
+ I+ D KG+ + I V +D+ A +G L V
Sbjct: 69 SGINIDN--RMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS---- 122
Query: 474 TKESPGAPWQLVGLLPLFDP 493
+++G++ L D
Sbjct: 123 ---------RVLGVIALKDI 133
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 847 | |||
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 100.0 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 100.0 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.97 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.93 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.92 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.8 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.51 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.19 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.1 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.05 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.02 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.94 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.85 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.82 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.79 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.75 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.7 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.62 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.6 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.56 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.38 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.23 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.1 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 98.01 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.63 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.48 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.47 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.47 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.29 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.28 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.19 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.84 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.42 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.21 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 95.99 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 95.97 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 95.9 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 95.76 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 95.49 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 94.96 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 94.89 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 94.45 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 94.19 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 94.19 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 93.29 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 91.66 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 91.64 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 91.45 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 90.96 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 90.78 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 89.44 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 88.29 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 87.22 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 86.56 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 85.99 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 82.33 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 80.22 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1.4e-37 Score=353.70 Aligned_cols=232 Identities=21% Similarity=0.240 Sum_probs=180.0
Q ss_pred cccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHHHHhHHHHHHHHHHHHHHHHhcC---
Q 003103 17 VDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANG--- 91 (847)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~~~~il~~~~~~~--- 91 (847)
.++|+.+.||++++|+++ ++|||++||++|+++||+|++++++ +++|+.|+++|++|+.++|+++++++++++..
T Consensus 2 ~~~h~~~~e~v~~~l~td~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~ 81 (472)
T d1wpga4 2 EAAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEG 81 (472)
T ss_dssp TTGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCT
T ss_pred cChhhCCHHHHHHHhCcCcccCcCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcc
Confidence 469999999999999999 5799999999999999999999876 66788899999999999999999999998742
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEECCeEEEEeCCCCCCCcEEEEcCCCeeccce
Q 003103 92 GGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADA 171 (847)
Q Consensus 92 ~~~~~~~~~~~~i~~~i~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~ 171 (847)
......|.++++|++++++|+.++++||+|+++++++++++.++. ..||++|+|.
T Consensus 82 ~~~~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~~-------------------------~~~~~~P~d~ 136 (472)
T d1wpga4 82 EETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA-------------------------TEQDKTPLQQ 136 (472)
T ss_dssp TSTTSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCCC-------------------------CCCCCCHHHH
T ss_pred cccchhHhHhhhhhheeeeeeeEEeEEechHHHHHHHHhhhcccc-------------------------ccccCchHHH
Confidence 223457899999999999999999999999999999998876654 3578888887
Q ss_pred EEEeeCceEEEeccccCCCceeecCCCCccccceeeeeceEEEEEEeccchhHhhhHHHhhhccCCCCchHHHHHHHHHH
Q 003103 172 RLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNF 251 (847)
Q Consensus 172 ~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~~~~~ 251 (847)
++.+ +||+.+ .+.+.|..+|..|.+|++...+...
T Consensus 137 ~l~~-----------~g~~i~------------------~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 171 (472)
T d1wpga4 137 KLDE-----------FGEQLS------------------KVISLICVAVWLINIGHFNDPVHGG---------------- 171 (472)
T ss_dssp HHHH-----------HHHHHH------------------HHHHHHHHHHHHHCCTTSSSCCSSS----------------
T ss_pred HHHH-----------HHHHHH------------------HHHHHHHHHHHHHHHHHHHHHHhhh----------------
Confidence 6543 122210 0001111122222222211111100
Q ss_pred HHHHHHHHHHHHHHhhhhccccchHhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhhcCCceeccchhhhhcCCeEEE
Q 003103 252 CICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVL 331 (847)
Q Consensus 252 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i 331 (847)
.....+.+.+..+++++++++|+|||+++++++++|++||+|+|++||+++++|++|+..+.
T Consensus 172 ------------------~~~~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~ 233 (472)
T d1wpga4 172 ------------------SWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYN 233 (472)
T ss_dssp ------------------CSSSCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHH
T ss_pred ------------------hhHHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHH
Confidence 01234556777888999999999999999999999999999999999999999999988888
Q ss_pred EecCC
Q 003103 332 CSDKT 336 (847)
Q Consensus 332 ~~DKT 336 (847)
|+|||
T Consensus 234 ~~~k~ 238 (472)
T d1wpga4 234 NMKQF 238 (472)
T ss_dssp HHHHH
T ss_pred HhHHh
Confidence 88877
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=4.4e-35 Score=283.32 Aligned_cols=148 Identities=39% Similarity=0.545 Sum_probs=133.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC--CcccCccccccCCcchHHHHHHhcCeEEEe
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS--SSLLGQDKDASIAALPVDELIEKADGFAGV 569 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 569 (847)
||||+|++++|+.||++||+|+|+|||++.||+++|+++||..+.... ..+.+. +...++..+..+..++..+|||+
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~v~ar~ 97 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGR-EFDDLPLAEQREACRRACCFARV 97 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHH-HHHHSCHHHHHHHHHHCCEEESC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCcccccccccccc-ccchhhHHHHhhhhhhhhhhhcc
Confidence 999999999999999999999999999999999999999997542211 112222 22456677888899999999999
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHHH
Q 003103 570 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 640 (847)
Q Consensus 570 sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~g 640 (847)
+|+||..+|+.||++|++|+|+|||+||+|||++|||||+|++|+++|+++||++|++++|++++++|+||
T Consensus 98 ~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 98 EPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEeccccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.97 E-value=5.7e-31 Score=244.02 Aligned_cols=125 Identities=34% Similarity=0.495 Sum_probs=109.6
Q ss_pred eEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHh
Q 003103 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEK 562 (847)
Q Consensus 483 ~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (847)
+..+.++++|++|++++++|+.||++||+++|+|||++.+|.++|+++||.
T Consensus 11 ~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~----------------------------- 61 (135)
T d2b8ea1 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------------------------- 61 (135)
T ss_dssp CCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------
T ss_pred ceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh-----------------------------
Confidence 345578999999999999999999999999999999999999999999984
Q ss_pred cCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 563 ADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 563 ~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
.+|++++|++|.++|+.+|+. ++|+|+|||.||+|||++|||||+|++++++++++||++|++++|++|+++|+
T Consensus 62 -~v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 62 -LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp -EEECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEECCC--------SEEESSCCTHHHHHHHC
T ss_pred -hhccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecCccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 279999999999999999875 58999999999999999999999999999999999999999999999999874
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.93 E-value=3.8e-30 Score=283.87 Aligned_cols=312 Identities=10% Similarity=-0.027 Sum_probs=210.6
Q ss_pred chhhhhcCCeEEEEecCCCccccCceEEEEEeee-----ecccCCCh-HHHHHHHHHhc----cccCcchHHHHHHHhcC
Q 003103 319 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIE-----VFAKGVEK-EHVILLAARAS----RTENQDAIDAAIVGMLA 388 (847)
Q Consensus 319 ~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~-----~~~~~~~~-~~~l~~~~~~~----~~~~~~~~~~ai~~~~~ 388 (847)
..+.|.||...++|+|||||+|.|+|++..+..+ ....+... -++....+.+. ....+++...+++....
T Consensus 30 l~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~~g~n~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (380)
T d1qyia_ 30 LMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDILKKLSHDEIEAFMYQDE 109 (380)
T ss_dssp HHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHCSS
T ss_pred hhchhhcccceeeecCcccchhhhhheeeeecchhhhHhhhhcCCChhHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHh
Confidence 4567999999999999999999999987442210 00011221 12222222111 11233555566655443
Q ss_pred ChH----HHhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHHhcCCChHHHHHHHHHHHHHHHccCeEEE
Q 003103 389 DPK----EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLG 464 (847)
Q Consensus 389 ~~~----~~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~ 464 (847)
... +.+..+.....+||++.+|+|++.....++.+..+.+|+++.+. ..+.....+...+..++++|+|+++
T Consensus 110 ~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~----~~~~~~~~~~~~~~~~a~~~~r~l~ 185 (380)
T d1qyia_ 110 PVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH----VSDATLFSLKGALWTLAQEVYQEWY 185 (380)
T ss_dssp CHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTT----CSCCGGGSTTCHHHHHHHHHHHHHH
T ss_pred hccchHHHHHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcC----CcHHHHHHHHhHHHHHHHHHHHHHH
Confidence 222 22445666778999999999976654333334444566666542 2223344566777889999999999
Q ss_pred EEeeecCCCCCCCCCCCceEEEEecccCCCCc--chHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcc
Q 003103 465 VARQEIPEKTKESPGAPWQLVGLLPLFDPPRH--DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 542 (847)
Q Consensus 465 ~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~--~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~ 542 (847)
+|++..+..+.+ ...+....|++..+|++|| +++++++.||++|++++|+|||+..+|..+++++||.........+
T Consensus 186 ~~~~~~~~~~~~-~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~ 264 (380)
T d1qyia_ 186 LGSKLYEDVEKK-IARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIA 264 (380)
T ss_dssp HHHHHHHHHHCS-CCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEE
T ss_pred Hhhhcccccccc-cchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEE
Confidence 998865432211 1223355789999999665 9999999999999999999999999999999999996432211111
Q ss_pred cCcccc--------ccCCcchHHHHHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcC---cceecc
Q 003103 543 LGQDKD--------ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKAD---IGIAVA 611 (847)
Q Consensus 543 ~~~~~~--------~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~Ad---VGIamg 611 (847)
.+.+.. .....+.-.+.+....+++|++|++|.++++.++..++.|+|+|||+||++|+|+|| |||+||
T Consensus 265 ~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G 344 (380)
T d1qyia_ 265 TASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTG 344 (380)
T ss_dssp CHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCB
T ss_pred ecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecC
Confidence 111100 000011111233344568999999999999999999999999999999999999999 999999
Q ss_pred -cccHHHhh----ccCEEEcCCChhhHHHHH
Q 003103 612 -DATDAARS----ASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 612 -~g~~~a~~----aaDivl~~~~~~~i~~~i 637 (847)
.|++++++ .||+++ +++..+..++
T Consensus 345 ~~g~~~~~el~~~~AD~ii--~~~~el~~il 373 (380)
T d1qyia_ 345 LKGKDAAGELEAHHADYVI--NHLGELRGVL 373 (380)
T ss_dssp TTBGGGHHHHHHTTCSEEE--SSGGGHHHHH
T ss_pred CCCcccHHHHHhCCCCEEE--CCHHHHHHHH
Confidence 67766554 799999 7788876655
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.92 E-value=8.8e-26 Score=201.66 Aligned_cols=97 Identities=40% Similarity=0.589 Sum_probs=88.7
Q ss_pred eEEEEECCeE--EEEeCCCCCCCcEEEEcCCCeeccceEEEee--CceEEEeccccCCCceeecCCC-------------
Q 003103 136 KTKVLRDGRW--SEQDASILVPGDVISIKLGDIVPADARLLEG--DPLKIDQSALTGESLPVTKNPY------------- 198 (847)
Q Consensus 136 ~~~V~rdg~~--~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g--~~~~Vdes~LTGEs~pv~K~~~------------- 198 (847)
.++|+|+|++ ++|+++||+|||+|.|++||+|||||+|+++ .++.||||+|||||.|+.|.++
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~ 81 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK 81 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence 5799999985 7899999999999999999999999999864 3589999999999999999753
Q ss_pred CccccceeeeeceEEEEEEeccchhHhhhHHHhh
Q 003103 199 DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 232 (847)
Q Consensus 199 ~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~ 232 (847)
|.+|+||.|.+|+++++|++||.+|.+|||++++
T Consensus 82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred ceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence 5699999999999999999999999999998753
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.80 E-value=2.2e-19 Score=180.80 Aligned_cols=123 Identities=22% Similarity=0.342 Sum_probs=99.9
Q ss_pred CcchHHHHHHHhc----CChHHHhccceEEEeecCCCCCcceEEEEEcC--CCcEEEEEcCcHHHHHHhcC---------
Q 003103 375 NQDAIDAAIVGML----ADPKEARAGVREVHFLPFNPVDKRTALTYIDS--DGNWHRASKGAPEQILALCN--------- 439 (847)
Q Consensus 375 ~~~~~~~ai~~~~----~~~~~~~~~~~~~~~~pf~s~~k~~~v~~~~~--~g~~~~~~KGa~e~i~~~~~--------- 439 (847)
.++|.|.|++.++ .+....+..++++..+||+|.+|||+++++.. ++++++|+|||||.|+++|+
T Consensus 64 ~GdptE~ALl~~a~~~~~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~ 143 (214)
T d1q3ia_ 64 AGDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEI 143 (214)
T ss_dssp CSCHHHHHHHHHHHHHHSCHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEE
T ss_pred ccChHHHHHHHHHHHhCCCHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCcee
Confidence 3599999999875 35566778899999999999999999999864 45688999999999999997
Q ss_pred -CChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCC-----------CCCCCCCceEEEEecccCCCCcc
Q 003103 440 -CREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT-----------KESPGAPWQLVGLLPLFDPPRHD 497 (847)
Q Consensus 440 -~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~-----------~~~~e~~l~~lG~i~~~D~lr~~ 497 (847)
.+++.++.+.+.+++|+++|+|||++|||+++..+ .+..|++|+|+|+++++||||++
T Consensus 144 ~l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 144 PLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp ECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred echHHHHHHHHHHHHHHhhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 35677889999999999999999999999987542 23457899999999999999975
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.51 E-value=3.4e-15 Score=152.39 Aligned_cols=151 Identities=19% Similarity=0.276 Sum_probs=106.9
Q ss_pred cCCCccccCceEEEEEeeeecccCCChHHHHHHHHHhcccc------------CcchHHHHHHHhcCC------------
Q 003103 334 DKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTE------------NQDAIDAAIVGMLAD------------ 389 (847)
Q Consensus 334 DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~------------~~~~~~~ai~~~~~~------------ 389 (847)
+..|+++.++-.+.. ........++..++.|+... .++|.|.|++.++..
T Consensus 30 ~p~G~i~~~~~~v~~------~~~~~l~~ll~~~~LCn~a~l~~~~~~~~~~~~G~pTE~ALl~~a~k~g~~~~~~~~~~ 103 (239)
T d1wpga3 30 APEGEVLKNDKPIRS------GQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLS 103 (239)
T ss_dssp SSCCCEEETTEECCG------GGCHHHHHHHHHHHHSCSCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCSSSC
T ss_pred CCceEEEECCcCcCc------cccHHHHHHHHHHHhcCCCEeeecCCCCeEEEcCCCCcHHHHHHHHHhCCChHHhhccc
Confidence 556677666543311 11112234555566664321 157888888776521
Q ss_pred --------hHHHhccceEEEeecCCCCCcceEEEEEcCCC-----cEEEEEcCcHHHHHHhcCC----------ChHHHH
Q 003103 390 --------PKEARAGVREVHFLPFNPVDKRTALTYIDSDG-----NWHRASKGAPEQILALCNC----------REDVRK 446 (847)
Q Consensus 390 --------~~~~~~~~~~~~~~pf~s~~k~~~v~~~~~~g-----~~~~~~KGa~e~i~~~~~~----------~~~~~~ 446 (847)
....+..++++..+||+|.||||+++++..++ .+.+|+|||||.|+++|+. +++.++
T Consensus 104 ~~~~~~~~~~~~~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~ 183 (239)
T d1wpga3 104 KVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKE 183 (239)
T ss_dssp HHHHTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHH
T ss_pred hhhhhccchhhhhhhCeEEEEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHH
Confidence 01124678899999999999999999986554 3689999999999999973 566778
Q ss_pred HHHHHHHHH--HHccCeEEEEEeeecCCCCC----------CCCCCCceEEEEecc
Q 003103 447 KVHAVIDKF--AERGLRSLGVARQEIPEKTK----------ESPGAPWQLVGLLPL 490 (847)
Q Consensus 447 ~~~~~~~~~--~~~G~rvl~~a~~~~~~~~~----------~~~e~~l~~lG~i~~ 490 (847)
.+.+.++++ +++|+|||++|||+++..+. +.+|++|+|+|++++
T Consensus 184 ~~~~~~~~~~~a~~glRvLa~A~k~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 184 KILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp HHHHHHHHHTTSSCCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred HHHHHHHHHhHhhCCCEEEEEEEEECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence 888888876 67999999999999875432 235789999999986
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.19 E-value=3.9e-11 Score=120.39 Aligned_cols=148 Identities=20% Similarity=0.210 Sum_probs=106.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCC--Ccc--------------------------cC
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS--SSL--------------------------LG 544 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~--~~~--------------------------~~ 544 (847)
.+.+++.+++++|+++|++++++||+....+...++..++....... ..+ .+
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 46789999999999999999999999999999999999885321100 000 00
Q ss_pred c----cc----------cccCCcchHHHHHHhcC-----------eEEEeChhhHHHHHHHHhhc----CCEEEEEcCCc
Q 003103 545 Q----DK----------DASIAALPVDELIEKAD-----------GFAGVFPEHKYEIVKRLQER----KHICGMTGDGV 595 (847)
Q Consensus 545 ~----~~----------~~~~~~~~~~~~~~~~~-----------v~ar~sP~qK~~iV~~lq~~----g~~V~miGDG~ 595 (847)
. .. ......+.+.+++++.. +-.......|...++.+.++ .+.|+++|||.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~ 178 (230)
T d1wr8a_ 99 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 178 (230)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCc
Confidence 0 00 00011122334433221 12223345788888776553 35689999999
Q ss_pred CChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHHH
Q 003103 596 NDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 640 (847)
Q Consensus 596 ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~g 640 (847)
||.+|++.|++||||+++.+.+|++||+|+..++...+.++|++-
T Consensus 179 NDi~ml~~ag~~vav~na~~~~k~~A~~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 179 NDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp GGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHHH
T ss_pred cHHHHHHHCCeEEEECCCCHHHHHhCCEEECCCCcCHHHHHHHHH
Confidence 999999999999999999999999999999999999998887753
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.10 E-value=4.3e-10 Score=112.75 Aligned_cols=149 Identities=20% Similarity=0.162 Sum_probs=105.0
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCC--cccCc-----------------------
Q 003103 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS--SLLGQ----------------------- 545 (847)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~--~~~~~----------------------- 545 (847)
+.++.+++.+++++|++.|++++++||.+...+..++...|+........ .+...
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 97 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHh
Confidence 34567899999999999999999999999999999999999854221100 00000
Q ss_pred --------------cccccCCcchHHHHHH---hc--Ce-----EEEeCh--hhHHHHHHHHhhc-C---CEEEEEcCCc
Q 003103 546 --------------DKDASIAALPVDELIE---KA--DG-----FAGVFP--EHKYEIVKRLQER-K---HICGMTGDGV 595 (847)
Q Consensus 546 --------------~~~~~~~~~~~~~~~~---~~--~v-----~ar~sP--~qK~~iV~~lq~~-g---~~V~miGDG~ 595 (847)
........+..+.+.. .. .+ +....| .+|...++.+.+. | ..|+++|||.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~ 177 (225)
T d1l6ra_ 98 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 177 (225)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred cCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCc
Confidence 0000111122222221 11 11 223334 4888888877553 2 3488899999
Q ss_pred CChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHH
Q 003103 596 NDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 639 (847)
Q Consensus 596 ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~ 639 (847)
||.+|++.|++||||+++.+.+++.||+|...++..+|.++++.
T Consensus 178 nD~~m~~~a~~~vav~na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 178 NDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp GGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred chHHHHHHCCeEEEECCCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 99999999999999999999999999999999998999888763
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.05 E-value=1.9e-10 Score=110.40 Aligned_cols=98 Identities=24% Similarity=0.255 Sum_probs=81.5
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChhhHHHHHH
Q 003103 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 579 (847)
Q Consensus 500 ~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~qK~~iV~ 579 (847)
.+|+.|++.|+.+.++||++...+...++++++.. ++. ...+|...++
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~------------------------------~~~--~~~~K~~~l~ 86 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL------------------------------FFL--GKLEKETACF 86 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE------------------------------EEE--SCSCHHHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc------------------------------ccc--ccccHHHHHH
Confidence 47999999999999999999999999999999842 122 2345555555
Q ss_pred HHhh-c---CCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCC
Q 003103 580 RLQE-R---KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629 (847)
Q Consensus 580 ~lq~-~---g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~ 629 (847)
.+.+ . ...|+++|||.||.|||+.|++|+||+++.+.+++.||+|+..++
T Consensus 87 ~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A~~Vt~~~G 140 (177)
T d1k1ea_ 87 DLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHG 140 (177)
T ss_dssp HHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCT
T ss_pred HHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcCCccHHHHHhCCEEeCCCC
Confidence 4433 2 367999999999999999999999999999999999999998765
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.02 E-value=2.3e-10 Score=114.32 Aligned_cols=130 Identities=17% Similarity=0.111 Sum_probs=91.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
+++|++.+.|+.||+.|++++++||.....+..+++.+|+.....-...+.. ..++.. ...........+.
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~-----~~~G~~----~g~~~~~p~~~~~ 152 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKF-----YFNGEY----AGFDETQPTAESG 152 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEE-----CTTSCE----EEECTTSGGGSTT
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeee-----eehhcc----ccceeeeeeeccc
Confidence 3689999999999999999999999999999999999999632100000000 000000 0000000013467
Q ss_pred hHHHHHHHHhhc--CCEEEEEcCCcCChhhhhhcCcceecc--cccHHHhhccCEEEcCCChhhH
Q 003103 573 HKYEIVKRLQER--KHICGMTGDGVNDAPALKKADIGIAVA--DATDAARSASDIVLTEPGLSVI 633 (847)
Q Consensus 573 qK~~iV~~lq~~--g~~V~miGDG~ND~~aLk~AdVGIamg--~g~~~a~~aaDivl~~~~~~~i 633 (847)
.|.++++.++++ -..+.|+|||.||.+|++.|+++||++ ......++.||+++ ++|..+
T Consensus 153 ~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i--~~f~el 215 (217)
T d1nnla_ 153 GKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYI--TDFVEL 215 (217)
T ss_dssp HHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEE--SCGGGG
T ss_pred hHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEe--CCHHHh
Confidence 899999999865 246899999999999999999999997 34456677899988 446543
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.94 E-value=5.6e-10 Score=111.78 Aligned_cols=148 Identities=14% Similarity=0.068 Sum_probs=105.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
+++|++.+.++.|++.|+++.++|+-....+..+.+++|+................ ............++..|+
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~------~~~~~~~~~~~~~~~k~~ 148 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYI------HIDWPHSCKGTCSNQCGC 148 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBC------EEECTTCCCTTCCSCCSS
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcc------eeccccccccccccCCHH
Confidence 46899999999999999999999999999999999999875432111111000000 000000011235677899
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHh-hccCEEEcCCChhhHHHHHHHHHHHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR-SASDIVLTEPGLSVIISAVLTSRAIFQRM 647 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~-~aaDivl~~~~~~~i~~~i~~gR~~~~~i 647 (847)
.|..+++.++..++.|.|+||+.||.+|+++||+++|++...+.++ +..+.+ .-++|+.|...++.-..+.+.+
T Consensus 149 ~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~-~~~d~~~i~~~l~~~~~~~~~~ 223 (226)
T d2feaa1 149 CKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHL-PYQDFYEIRKEIENVKEVQEWL 223 (226)
T ss_dssp CHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEE-CCSSHHHHHHHHHTSHHHHHHH
T ss_pred HHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCee-ecCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999986545444 444443 3468999988887655444443
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.85 E-value=2.7e-09 Score=110.54 Aligned_cols=71 Identities=23% Similarity=0.298 Sum_probs=60.8
Q ss_pred EeChh--hHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 568 GVFPE--HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 568 r~sP~--qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
.++|. .|..-++.+.+. | ..|+++|||.||.+||+.|+.|+||++|++.+++.||++..+++-.++.++|+
T Consensus 206 di~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~ 282 (285)
T d1nrwa_ 206 ELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 282 (285)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 35565 799888888764 2 35899999999999999999999999999999999999998777778877775
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.82 E-value=6.1e-09 Score=107.03 Aligned_cols=71 Identities=21% Similarity=0.221 Sum_probs=59.9
Q ss_pred EeChh--hHHHHHHHHhhc----CCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 568 GVFPE--HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 568 r~sP~--qK~~iV~~lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
..+|. +|...++.+.+. ...+.++|||.||.+||+.|+.|+||+++.+..++.||+|...++=.++.++++
T Consensus 190 ~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 190 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp EEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred EecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCcChHHHHHH
Confidence 35565 699988888764 234889999999999999999999999999999999999988777677777765
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.79 E-value=2.9e-09 Score=109.46 Aligned_cols=72 Identities=21% Similarity=0.250 Sum_probs=61.3
Q ss_pred EEeChh--hHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 567 AGVFPE--HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 567 ar~sP~--qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
-.++|. .|..-++.|.++ | ..|.++|||.||.+||+.|+.|+||+++.+..|+.||+|+.+++-.++.++|+
T Consensus 182 ~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 182 IDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp EEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 356664 599989888664 3 34889999999999999999999999999999999999998888788877775
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.75 E-value=1.4e-08 Score=99.22 Aligned_cols=130 Identities=15% Similarity=0.156 Sum_probs=94.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
+..++....++.+ +.+.++..+|+.............++............. ..........+.
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---------------~~~~~~~~~~~~ 132 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDS---------------DRVVGYQLRQKD 132 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTT---------------SCEEEEECCSSS
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeecc---------------cccccccccchh
Confidence 4456667777665 578999999999999999999988875321100000000 001123445566
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 639 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~ 639 (847)
.+...++.++.....|.++|||.||.+||+.|++||||+...++.++++|++.. +++..+++++..
T Consensus 133 ~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmna~~~v~~~~~~~~~~-~~~~d~~~~~~~ 198 (206)
T d1rkua_ 133 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLK 198 (206)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCEE-CSHHHHHHHHHH
T ss_pred hHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEECCCHHHHHhCCCceee-cCHHHHHHHHHH
Confidence 677788888888999999999999999999999999997777788889999875 567888877654
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.70 E-value=9e-09 Score=100.79 Aligned_cols=130 Identities=25% Similarity=0.282 Sum_probs=90.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE--e
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--V 569 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar--~ 569 (847)
.++.+++.+.++.++..|..+.++||.....+....++.++...... .+...... ....... .
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-------------~~~~~~~~~~ 138 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFAN--RLIVKDGK-------------LTGDVEGEVL 138 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE--EEEEETTE-------------EEEEEECSSC
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhh--hhcccccc-------------cccccccccc
Confidence 46778999999999999999999999999999999998887431100 00000000 0000000 0
Q ss_pred ChhhHHHHH----HHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHH
Q 003103 570 FPEHKYEIV----KRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 570 sP~qK~~iV----~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i 637 (847)
.+..|...+ +.++-..+.+.++|||.||.+|++.|++|||| ++.+..++.||+|+..+|+..|++.|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 139 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp STTHHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred ccccccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE-CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 122233333 33333345688999999999999999999999 77888999999999888888887654
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.62 E-value=1.3e-08 Score=104.94 Aligned_cols=66 Identities=27% Similarity=0.307 Sum_probs=52.1
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCCh-hhHHHHHH
Q 003103 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGL-SVIISAVL 638 (847)
Q Consensus 573 qK~~iV~~lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~-~~i~~~i~ 638 (847)
.|..-++.+.+. ...|+++|||.||.+||+.|+.|+||++|.+.+|+.||+|+..++- ..+..+++
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 566666665543 3468999999999999999999999999999999999999865543 34555543
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.60 E-value=2e-08 Score=102.63 Aligned_cols=73 Identities=26% Similarity=0.284 Sum_probs=61.4
Q ss_pred EEeChh--hHHHHHHHHhhc----CCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHHH
Q 003103 567 AGVFPE--HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 639 (847)
Q Consensus 567 ar~sP~--qK~~iV~~lq~~----g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~~ 639 (847)
..+.|. .|..-++.|.++ ...++++|||.||.+||+.|+.|+||++|++.+|+.||+|..+++-..+.++|+.
T Consensus 178 ~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 178 ADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp CEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 345554 698888887653 3458889999999999999999999999999999999999888878888888853
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.56 E-value=6.8e-08 Score=98.95 Aligned_cols=71 Identities=25% Similarity=0.304 Sum_probs=60.1
Q ss_pred EeChh--hHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 568 GVFPE--HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 568 r~sP~--qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
.++|. .|..-++.+.+. | ..|+++|||.||.+||+.|++||||++|++.+|+.||+|+.+++-.++.++|+
T Consensus 183 di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred eecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 45564 688888877654 3 34788999999999999999999999999999999999998888888888775
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.38 E-value=6.6e-07 Score=89.43 Aligned_cols=44 Identities=11% Similarity=0.071 Sum_probs=39.4
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 003103 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534 (847)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~ 534 (847)
.+...+.++++|++|+++|+++++.||.+...+..+.+++|+..
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~ 58 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence 44556789999999999999999999999999999999999854
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.23 E-value=1.1e-06 Score=88.27 Aligned_cols=68 Identities=19% Similarity=0.170 Sum_probs=55.3
Q ss_pred hhhHHHHHHHHhhc-C---CEEEEEcCCcCChhhhhhcCcceecccccHHHhhccC-------EEEcCCChhhHHHHHH
Q 003103 571 PEHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD-------IVLTEPGLSVIISAVL 638 (847)
Q Consensus 571 P~qK~~iV~~lq~~-g---~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaD-------ivl~~~~~~~i~~~i~ 638 (847)
...|...++.+.+. | ..|.++|||.||.+||+.|+.|++|+++.+..++.|| ++-..++-..+.++++
T Consensus 160 ~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~ 238 (244)
T d1s2oa1 160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred ccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHHHHHHhhcccccceEEcCCCCccHHHHHHH
Confidence 45799988888765 2 3478899999999999999999999999999998888 4555556667777665
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.10 E-value=5.1e-06 Score=81.89 Aligned_cols=41 Identities=17% Similarity=0.071 Sum_probs=38.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~ 533 (847)
.+.+.+.+++++|+++|+.++++||.+...+..+.+++|+.
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 46688999999999999999999999999999999999985
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=98.01 E-value=6.8e-06 Score=74.49 Aligned_cols=128 Identities=19% Similarity=0.263 Sum_probs=89.1
Q ss_pred EEEEeeeecccCCChHHHHHHHHHhccccCcchHHHHHHHhcCChHHH---hccceEEEeecCCCCCcceEEEEEcCCCc
Q 003103 346 VDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEA---RAGVREVHFLPFNPVDKRTALTYIDSDGN 422 (847)
Q Consensus 346 v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~---~~~~~~~~~~pf~s~~k~~~v~~~~~~g~ 422 (847)
++++.+ ..|.++++++.+|+.++..+. ||+..|++.++.+.... ..........||....+...+. .+|
T Consensus 4 ~td~ip---~~G~~~~ell~~AA~aE~~Se-HPlakAIv~~Ak~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~g- 75 (136)
T d2a29a1 4 ASEFIP---AQGVDEKTLADAAQLASLADE-TPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGIN---IDN- 75 (136)
T ss_dssp EEEEEE---CTTCCHHHHHHHHHHHHHTCC-SHHHHHHHHHHHHHHCCCCCCTTTTTCEEEEEETTTTEEEEE---ETT-
T ss_pred cceEEe---CCCCCHHHHHHHHHHHhCCCC-chHHHHHHHHHHHhcCCCccccccccccccccccccceEEEE---ECC-
Confidence 455543 468999999999999987666 99999999987432110 1122333456666655444332 245
Q ss_pred EEEEEcCcHHHHHHhcCC-ChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecccCCCC
Q 003103 423 WHRASKGAPEQILALCNC-REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPR 495 (847)
Q Consensus 423 ~~~~~KGa~e~i~~~~~~-~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr 495 (847)
..+.+|++..+.+.+.. ....+..+.+.+++++.+|..++.+|... +++|++++.|++|
T Consensus 76 -~~v~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va~d~-------------~~~G~i~l~D~iK 135 (136)
T d2a29a1 76 -RMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIALKDIVK 135 (136)
T ss_dssp -EEEEEECHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEEETT-------------EEEEEEEEEESSC
T ss_pred -EEEEecHHHHHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEEECC-------------EEEEEEEEEeecC
Confidence 46678999877654321 11235567788899999999999999865 8999999999987
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.63 E-value=5e-05 Score=74.71 Aligned_cols=124 Identities=15% Similarity=0.181 Sum_probs=81.8
Q ss_pred CCCcchHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE-eC
Q 003103 493 PPRHDSAETIRRALNLG-VNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VF 570 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aG-I~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar-~s 570 (847)
++-||+.+++++|++.| +++.++||.....+..+.++.|+.... + .+...+. +..+ -.
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~f-d--~i~~~~~-----------------~~~~k~~ 150 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF-P--FGAFADD-----------------ALDRNEL 150 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC-S--CEECTTT-----------------CSSGGGH
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccc-c--ccccccc-----------------cccccch
Confidence 34679999999999987 899999999999999999999986421 1 1111000 0000 01
Q ss_pred hhhHHHHHHHHhhc---CCEEEEEcCCcCChhhhhhcCc---ceeccc--ccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 571 PEHKYEIVKRLQER---KHICGMTGDGVNDAPALKKADI---GIAVAD--ATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 571 P~qK~~iV~~lq~~---g~~V~miGDG~ND~~aLk~AdV---GIamg~--g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
|+--...++.+... .+.+.||||+.+|..|-+.|++ +|+.|. ..+..+..||+++ ++++.+.+.+.
T Consensus 151 p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi--~~~~el~~~l~ 224 (228)
T d2hcfa1 151 PHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF--KNFAETDEVLA 224 (228)
T ss_dssp HHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE--SCSCCHHHHHH
T ss_pred hHHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEE--CCHHHHHHHHH
Confidence 11112233333322 2568999999999999999994 455453 2334555689998 77888887765
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.48 E-value=0.00023 Score=72.33 Aligned_cols=131 Identities=11% Similarity=0.107 Sum_probs=80.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE----
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG---- 568 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar---- 568 (847)
++|+|+++.++.|++.|+.+.++||--......+++++|+..+.. .+..+... .++. .+..+
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni---~I~sN~l~--f~~~---------~~~~~~~~~ 200 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNV---KVVSNFMD--FDEN---------GVLKGFKGE 200 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTE---EEEEECEE--ECTT---------SBEEEECSS
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCc---eEEeeEEE--EeCC---------eeEeeccCC
Confidence 589999999999999999999999999999999999999864210 01000000 0000 00000
Q ss_pred -eChhhHHHHH----HHHh--hcCCEEEEEcCCcCChhhhhh---cCcceecc--cc-c----HHHhhccCEEEcCCChh
Q 003103 569 -VFPEHKYEIV----KRLQ--ERKHICGMTGDGVNDAPALKK---ADIGIAVA--DA-T----DAARSASDIVLTEPGLS 631 (847)
Q Consensus 569 -~sP~qK~~iV----~~lq--~~g~~V~miGDG~ND~~aLk~---AdVGIamg--~g-~----~~a~~aaDivl~~~~~~ 631 (847)
.....|...+ ..++ +....|.++|||+||..|.+. ++.++++| +. . +.=.++-|+|+.+|.--
T Consensus 201 ~i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~ 280 (291)
T d2bdua1 201 LIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESL 280 (291)
T ss_dssp CCCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBC
T ss_pred ccccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCCh
Confidence 1122333222 1112 234578899999999999874 34555554 21 1 12236789999887654
Q ss_pred hHHHHH
Q 003103 632 VIISAV 637 (847)
Q Consensus 632 ~i~~~i 637 (847)
.++..|
T Consensus 281 ~v~~~i 286 (291)
T d2bdua1 281 EVVNSI 286 (291)
T ss_dssp HHHHHH
T ss_pred hHHHHH
Confidence 544443
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.47 E-value=3.2e-05 Score=75.56 Aligned_cols=124 Identities=16% Similarity=0.120 Sum_probs=85.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++++.++.|++.|+++.++||.....+..+.+++|+.... + ..+...+.. ..+-.|+
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f-~-~~~~~~~~~-----------------~~kp~p~ 155 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF-S-EMLGGQSLP-----------------EIKPHPA 155 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC-S-EEECTTTSS-----------------SCTTSSH
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhc-c-ccccccccc-----------------cccccch
Confidence 45799999999999999999999999999999999999985321 1 011000000 0112234
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCc-ceec--c--cccHHHhhccCEEEcCCChhhHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAV--A--DATDAARSASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIam--g--~g~~~a~~aaDivl~~~~~~~i~~~i 637 (847)
--..+.+.++-....+.|+||..+|..+-+.|++ .|.+ | +..+.....+|+++ ++++.++++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v--~~l~dL~~ii 223 (224)
T d2hsza1 156 PFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADILKIT 223 (224)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGGGGT
T ss_pred hhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEE--CCHHHHHHhh
Confidence 4444555555556779999999999999999987 3333 3 12234555689998 6777776554
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.47 E-value=8.2e-05 Score=72.65 Aligned_cols=57 Identities=11% Similarity=0.208 Sum_probs=43.9
Q ss_pred EEeChh--hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCEEEc
Q 003103 567 AGVFPE--HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLT 626 (847)
Q Consensus 567 ar~sP~--qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDivl~ 626 (847)
-.+.|. .|..-++.|.++.. +.++||+.||.+|++.|+-|+||+.|. ++.+|++.+.
T Consensus 151 idi~p~g~~Kg~al~~l~~~~~-~i~~GDs~ND~~Mf~~~~~~~av~~g~--~~~~A~~~~~ 209 (229)
T d1u02a_ 151 IELRVPGVNKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIKVGE--GETHAKFHVA 209 (229)
T ss_dssp EEEECTTCCHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEEESS--SCCCCSEEES
T ss_pred EEEecCCCCHHHHHHHHhcccc-ceeecCCCChHHHHhccCCeEEEEeCC--CCccCeEEcC
Confidence 345553 79999999988765 568899999999999998877775443 2568899884
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.29 E-value=0.00028 Score=70.44 Aligned_cols=127 Identities=13% Similarity=0.095 Sum_probs=84.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
.++.|++.++++.|++.|+++.++||.+...+..+-++.|+.....+ ..+.+.+. ...+-.|
T Consensus 98 ~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d-~~~~~d~~-----------------~~~KP~p 159 (257)
T d1swva_ 98 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPD-FLVTPDDV-----------------PAGRPYP 159 (257)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCS-CCBCGGGS-----------------SCCTTSS
T ss_pred CccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccccc-cccccccc-----------------cccccCh
Confidence 35789999999999999999999999999999999999888542211 11111110 0112233
Q ss_pred hhHHHHHHHHhhc-CCEEEEEcCCcCChhhhhhcCcc-eecccccH---------------------------HHhhccC
Q 003103 572 EHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIG-IAVADATD---------------------------AARSASD 622 (847)
Q Consensus 572 ~qK~~iV~~lq~~-g~~V~miGDG~ND~~aLk~AdVG-Iamg~g~~---------------------------~a~~aaD 622 (847)
+.=....+.+.-. .+.|.|+||..+|..+=+.|++- |++..|.. ..+.-||
T Consensus 160 ~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad 239 (257)
T d1swva_ 160 WMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAH 239 (257)
T ss_dssp HHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCC
Confidence 3334444555432 35689999999999999999972 33332210 1112389
Q ss_pred EEEcCCChhhHHHHHH
Q 003103 623 IVLTEPGLSVIISAVL 638 (847)
Q Consensus 623 ivl~~~~~~~i~~~i~ 638 (847)
+++ +++..++.+|.
T Consensus 240 ~vi--~~l~eL~~ii~ 253 (257)
T d1swva_ 240 FTI--ETMQELESVME 253 (257)
T ss_dssp EEE--SSGGGHHHHHH
T ss_pred EEE--CCHHHHHHHHH
Confidence 999 77888888775
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.28 E-value=3.1e-05 Score=76.29 Aligned_cols=53 Identities=19% Similarity=0.301 Sum_probs=45.9
Q ss_pred hHHHHHHHHhhc-CCEEEEEcC----CcCChhhhhhcC-cceecccccHHHhhccCEEE
Q 003103 573 HKYEIVKRLQER-KHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARSASDIVL 625 (847)
Q Consensus 573 qK~~iV~~lq~~-g~~V~miGD----G~ND~~aLk~Ad-VGIamg~g~~~a~~aaDivl 625 (847)
.|..-++.|.+. ...|.++|| |.||.+||++|+ .|+||+++.|.+|..+|+++
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~k~~~~~~~ 243 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFF 243 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHC
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHHHHHHHHhcC
Confidence 688888888654 457899999 569999999997 69999999999999999875
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.19 E-value=0.00019 Score=69.75 Aligned_cols=120 Identities=16% Similarity=0.186 Sum_probs=79.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.++++.|++.|+++.++|+.....+..+.+..|+.... . ..+.+.+. -.++-.|+
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F-~-~i~~~~~~-----------------~~~Kp~~~ 148 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF-D-ALASAEKL-----------------PYSKPHPQ 148 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC-S-EEEECTTS-----------------SCCTTSTH
T ss_pred cccchHHHHHHHhhhccccccccccccccccccccccccccccc-c-cccccccc-----------------ccchhhHH
Confidence 34689999999999999999999999999999999999995321 1 11111000 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcce-ecc--cc-cHHHhhccCEEEcCCChhhH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AVA--DA-TDAARSASDIVLTEPGLSVI 633 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGI-amg--~g-~~~a~~aaDivl~~~~~~~i 633 (847)
-=..+.+.+.-....++|+||+.+|..|-+.|++.. .+. .. .+.-...||.++ ++|..+
T Consensus 149 ~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i--~~l~el 211 (218)
T d1te2a_ 149 VYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKL--SSLTEL 211 (218)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEEC--SCGGGC
T ss_pred HHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEE--CChhhC
Confidence 233444555444567899999999999999999733 332 22 222234688887 556543
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.84 E-value=0.00027 Score=68.11 Aligned_cols=120 Identities=9% Similarity=0.004 Sum_probs=79.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.+++.+.++.++..+ ++.++|+.....+..+.++.|+.... + ..+. .. -..+..|+
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~f-d-~v~~-~~------------------~~~~~~p~ 141 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFF-D-GIYG-SS------------------PEAPHKAD 141 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGC-S-EEEE-EC------------------SSCCSHHH
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccc-c-cccc-cc------------------cccccccc
Confidence 46789999999999775 89999999999999999999985421 0 0000 00 01122343
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCc-ceec--cc--ccHHHhhccCEEEcCCChhhHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAV--AD--ATDAARSASDIVLTEPGLSVIISA 636 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIam--g~--g~~~a~~aaDivl~~~~~~~i~~~ 636 (847)
--..+.+.++-....+.||||+.||..|-++|++ .|++ |. ..+.....+|+++ +++..+.+.
T Consensus 142 ~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi--~~l~el~~~ 208 (210)
T d2ah5a1 142 VIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIA--HKPLEVLAY 208 (210)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEE--SSTTHHHHH
T ss_pred ccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEE--CCHHHHHHH
Confidence 3333444444344568899999999999999997 4444 42 2334444589998 667776654
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.42 E-value=0.0046 Score=57.97 Aligned_cols=134 Identities=17% Similarity=0.141 Sum_probs=74.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHH---------------HHHHHHHcCCCCCCCCCCcccCccccccCCcchHHH
Q 003103 494 PRHDSAETIRRALNLGVNVKMITGDQLAI---------------GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDE 558 (847)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~~t---------------A~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (847)
+-|++.++++.|+++|+++.++|...... ........|+..... .+..... +.....
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~cp~~p-----~~~~~~ 99 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGI---YYCPHHP-----QGSVEE 99 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEE---EEECCBT-----TCSSGG
T ss_pred ECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccccce---eeccccc-----cccccc
Confidence 44899999999999999999999865210 011111222211000 0000000 000000
Q ss_pred HHHhcCeEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc--eec--ccc-cHHHhhccCEEEcCCChhhH
Q 003103 559 LIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG--IAV--ADA-TDAARSASDIVLTEPGLSVI 633 (847)
Q Consensus 559 ~~~~~~v~ar~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG--Iam--g~g-~~~a~~aaDivl~~~~~~~i 633 (847)
..+...+..-.|.-=..+.+.+.-.-..+.||||..+|..|=+.|+++ +.+ |.+ .+.....||+++ +++..+
T Consensus 100 -~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~--~~l~dl 176 (182)
T d2gmwa1 100 -FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLADL 176 (182)
T ss_dssp -GBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGGH
T ss_pred -ccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEE--CCHHHH
Confidence 000001122233333444555544445689999999999999999985 333 322 345556799998 789998
Q ss_pred HHHHH
Q 003103 634 ISAVL 638 (847)
Q Consensus 634 ~~~i~ 638 (847)
++.|+
T Consensus 177 ~~~ik 181 (182)
T d2gmwa1 177 PQAIK 181 (182)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 88775
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.21 E-value=0.0053 Score=59.58 Aligned_cols=121 Identities=17% Similarity=0.111 Sum_probs=78.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.||+.++++.|+ .|+++.++|+........+.+.+|+.... + ..+... +. ....|+
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~f-d-~i~~s~------------~~-------~~~KP~ 157 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLF-D-SITTSE------------EA-------GFFKPH 157 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGC-S-EEEEHH------------HH-------TBCTTS
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccccc-c-cccccc------------cc-------cccchh
Confidence 46899999999996 58999999998888889999999985321 0 000000 00 011122
Q ss_pred hHHHHHHHHhh---cCCEEEEEcCC-cCChhhhhhcCccee-c--ccccHHHhhccCEEEcCCChhhHHHHHH
Q 003103 573 HKYEIVKRLQE---RKHICGMTGDG-VNDAPALKKADIGIA-V--ADATDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV~~lq~---~g~~V~miGDG-~ND~~aLk~AdVGIa-m--g~g~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
- .-+-..+++ ....+.|+||. .+|..+-++|++-.. + +.......+.+|+++ ++++.+++.|+
T Consensus 158 ~-~~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~ 227 (230)
T d1x42a1 158 P-RIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVD 227 (230)
T ss_dssp H-HHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEE--SSTTHHHHHHH
T ss_pred h-HHHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEE--CCHHHHHHHHH
Confidence 2 122333333 33558999997 689999998887432 2 222333445789988 67888888776
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.99 E-value=0.0026 Score=60.58 Aligned_cols=118 Identities=15% Similarity=0.097 Sum_probs=74.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.++++.|++.|+++.++|+... .+..+-++.|+.... ..+.+.+.. ...+-.|+
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f---~~i~~s~~~----------------~~~Kp~~~ 141 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYF---TEILTSQSG----------------FVRKPSPE 141 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGE---EEEECGGGC----------------CCCTTSSH
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhccccccc---ccccccccc----------------cccchhHH
Confidence 4579999999999999999999998554 456677889985321 011111000 01112333
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc-eecccccHHHhhccCEEEcCCChhhHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADATDAARSASDIVLTEPGLSVIISA 636 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~g~~~a~~aaDivl~~~~~~~i~~~ 636 (847)
-=..+.+.+.-....+.||||+.+|..+-++|++. |.+..++. .+|..+ +++..+.++
T Consensus 142 ~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~~----~~~~~~--~~~~dl~~l 200 (204)
T d2go7a1 142 AATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLESTY----EGNHRI--QALADISRI 200 (204)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCSC----TTEEEC--SSTTHHHHH
T ss_pred HHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEcCCCC----CcCeec--CCHHHHHHH
Confidence 33444555544456799999999999999999984 34444432 344444 445555544
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=95.97 E-value=0.00078 Score=64.66 Aligned_cols=120 Identities=10% Similarity=0.063 Sum_probs=77.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.+.++.|++ ++++.++|+-....+..+.++.|+.... ..+.+.+.. -...-.|+
T Consensus 82 ~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f---~~i~~~~~~----------------~~~KP~p~ 141 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRM---AVTISADDT----------------PKRKPDPL 141 (207)
T ss_dssp EECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGE---EEEECGGGS----------------SCCTTSSH
T ss_pred ccccchhhhhhhhcc-cccccccccccccccccccccccccccc---ccccccccc----------------ccchhhhh
Confidence 356899999999975 7999999999999999999998875321 001000000 01111233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceec---ccccHHHhhccCEEEcCCChhhHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV---ADATDAARSASDIVLTEPGLSVII 634 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIam---g~g~~~a~~aaDivl~~~~~~~i~ 634 (847)
--..+.+.++-....+.||||..+|..+-++|++.... |..+....+.+|.++ +++..|.
T Consensus 142 ~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i--~~l~dll 204 (207)
T d2hdoa1 142 PLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRF--QKPLDIL 204 (207)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEE--SSGGGGG
T ss_pred hhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEe--CCHHHHH
Confidence 33444444443335688999999999999999887553 333344455788887 5566554
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=95.90 E-value=0.0049 Score=60.05 Aligned_cols=118 Identities=15% Similarity=0.067 Sum_probs=75.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
-.+.||+.+.+++|++.|+++.++|+..........+.+|+..-. +...... + ...+..|
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~-~~~~~~~-d------------------~~~~~KP 185 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDIL-ELVDGHF-D------------------TKIGHKV 185 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCG-GGCSEEE-C------------------GGGCCTT
T ss_pred cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhh-hhcceee-c------------------cccccCC
Confidence 456899999999999999999999999998888888888874311 1000000 0 0001122
Q ss_pred hh--HHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceec----cc-ccHHHhhccCEEEcCCChh
Q 003103 572 EH--KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV----AD-ATDAARSASDIVLTEPGLS 631 (847)
Q Consensus 572 ~q--K~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIam----g~-g~~~a~~aaDivl~~~~~~ 631 (847)
+. =....+.+.-....++|+||..+|+.+-++|++-... |+ ...-....++.++ ++|.
T Consensus 186 ~p~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i--~sl~ 250 (253)
T d1zs9a1 186 ESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLI--TSFS 250 (253)
T ss_dssp CHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEE--SSGG
T ss_pred CcHHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEE--CChH
Confidence 22 2233344433456789999999999999999985444 22 1222334567666 3454
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.76 E-value=0.0024 Score=58.85 Aligned_cols=88 Identities=10% Similarity=0.020 Sum_probs=60.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQ-LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~-~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
++.|++.++++.|++.|+++.++|+-+ ...+...-+..++..... .+...-.|
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~--------------------------~~~~~~kp 99 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFI--------------------------QREIYPGS 99 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCS--------------------------EEEESSSC
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccce--------------------------eeecccCC
Confidence 468999999999999999999999654 456666667766632100 01122223
Q ss_pred --hhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCc
Q 003103 572 --EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI 606 (847)
Q Consensus 572 --~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV 606 (847)
+.-.++.+.+.-..+.+.|+||..+|..+-++|++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~ 136 (164)
T d1u7pa_ 100 KVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGV 136 (164)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTC
T ss_pred ChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCC
Confidence 23233444444445678899999999999999877
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.49 E-value=0.018 Score=49.21 Aligned_cols=104 Identities=17% Similarity=0.203 Sum_probs=68.7
Q ss_pred CCChHHHHHHHHHhccccCcchHHHHHHHhcCChHHHhccceEEEeecCCCCCcceEEEEEcCCCcEEEEEcCcHHHHHH
Q 003103 357 GVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILA 436 (847)
Q Consensus 357 ~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~pf~s~~k~~~v~~~~~~g~~~~~~KGa~e~i~~ 436 (847)
+.++++++.+++..+..++ ||+..|++.++.+...........+..|-. ++ .|+. +.-|+++.+.+
T Consensus 9 ~~~e~elL~~aaslE~~S~-HPlA~AIv~~a~~~~~~~~~~~~~~~~~G~------Gi-----~g~~--v~vG~~~~~~~ 74 (113)
T d2b8ea2 9 NGDERELLRLAAIAERRSE-HPIAEAIVKKALEHGIELGEPEKVEVIAGE------GV-----VADG--ILVGNKRLMED 74 (113)
T ss_dssp SSCHHHHHHHHHHHTTTCC-SHHHHHHHHHHHTTTCCCCCCSCEEEETTT------EE-----EETT--EEEECHHHHHH
T ss_pred CCCHHHHHHHHHHHHCcCC-CchHHHHHHHHHHhcCCCCccccceeeccc------eE-----EeEE--EEECcHHHHHh
Confidence 3478889999888877666 999999999875432211122222333211 11 1121 34599999876
Q ss_pred hcCCChHHHHHHHHHHHHHHHccCeEEEEEeeecCCCCCCCCCCCceEEEEecc
Q 003103 437 LCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPL 490 (847)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~~~~~~~~~~~~e~~l~~lG~i~~ 490 (847)
..- +.++.+.+.++++..+|..++.++... +++|++++
T Consensus 75 ~~~---~~~~~~~~~~~~~~~~G~T~v~va~d~-------------~~~G~ial 112 (113)
T d2b8ea2 75 FGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAV 112 (113)
T ss_dssp TTC---CCCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEE
T ss_pred cCC---CCCHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEE
Confidence 422 234567778889999999999999876 78999876
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.96 E-value=0.022 Score=55.45 Aligned_cols=124 Identities=11% Similarity=0.110 Sum_probs=77.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
++.|++.++++.|++ |+++.++|+.+.......-+++|+.... + ..+...+.. .++-.|+
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f-d-~i~~s~~~~-----------------~~KP~p~ 168 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYF-D-AIVIGGEQK-----------------EEKPAPS 168 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGC-S-EEEEGGGSS-----------------SCTTCHH
T ss_pred ccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccccc-c-ccccccccc-----------------cchhhhh
Confidence 367999999999985 8999999999988888989999985321 1 111110000 0111111
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCc-CChhhhhhcCcc-eecc--cc--cHHHhhccCEEEcCCChhhHHHHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIG-IAVA--DA--TDAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~-ND~~aLk~AdVG-Iamg--~g--~~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
==..+.+.+.-....+.||||.. +|..+-+.|++. +..- .+ .......+|+++ +++..+.++++
T Consensus 169 ~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i--~~l~eL~~ll~ 238 (247)
T d2gfha1 169 IFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALLQ 238 (247)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHHH
T ss_pred hHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEE--CCHHHHHHHHH
Confidence 11222333332334588999996 899999999986 4331 11 222334578888 66888887775
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=94.89 E-value=0.0076 Score=56.45 Aligned_cols=108 Identities=15% Similarity=0.109 Sum_probs=66.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeE-EEeCh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGF-AGVFP 571 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-ar~sP 571 (847)
++.||+++.++.|++.|+++.++|+-+.... .+-++.|+.... + .+.+.+. +. ..-.|
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~f-d--~i~~~~~-----------------~~~~KP~p 137 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYF-T--EVVTSSS-----------------GFKRKPNP 137 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGE-E--EEECGGG-----------------CCCCTTSC
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhcccccc-c--ccccccc-----------------ccccCCCH
Confidence 4579999999999999999999998765544 566788875311 0 0111100 00 11112
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceecccccHHHhhccCE
Q 003103 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI 623 (847)
Q Consensus 572 ~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIamg~g~~~a~~aaDi 623 (847)
+--....+.+. -..+.|+||..+|..|-++|++=...-++.+-.++..|+
T Consensus 138 ~~~~~~~~~~~--~~~~l~vgDs~~Di~aA~~aG~~~i~v~~~~~~~~~~d~ 187 (187)
T d2fi1a1 138 ESMLYLREKYQ--ISSGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLDI 187 (187)
T ss_dssp HHHHHHHHHTT--CSSEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHTC
T ss_pred HHHHHHHHHcC--CCCeEEEeCCHHHHHHHHHcCCEEEEECCCCChHhhcCC
Confidence 22233333333 234789999999999999998764333445556655553
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=94.45 E-value=0.0092 Score=53.47 Aligned_cols=95 Identities=12% Similarity=0.010 Sum_probs=59.0
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHH----HHHHHHH------H-cCCCCCCCCCCcccCccccccCCcchHHHH
Q 003103 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLA----IGKETGR------R-LGMGTNMYPSSSLLGQDKDASIAALPVDEL 559 (847)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~----tA~~iA~------~-~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 559 (847)
+|++.|++.+.++.|++.|+++.++||-+.. |...+.+ . .+... .......
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~-----~~~~~~~------------- 95 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPL-----VMQCQRE------------- 95 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCC-----SEEEECC-------------
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcE-----EEeeccc-------------
Confidence 5789999999999999999999999997532 1111110 0 01000 0000000
Q ss_pred HHhcCeEEEeChhhHHHHHHHHhhcC-CEEEEEcCCcCChhhhhhcCcc
Q 003103 560 IEKADGFAGVFPEHKYEIVKRLQERK-HICGMTGDGVNDAPALKKADIG 607 (847)
Q Consensus 560 ~~~~~v~ar~sP~qK~~iV~~lq~~g-~~V~miGDG~ND~~aLk~AdVG 607 (847)
.--.|-.+.-|..+.+.+...+ .+++|+||-..|+.|.+++++=
T Consensus 96 ----~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 96 ----QGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp ----TTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred ----ccccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCc
Confidence 0001122456777777776654 4568899999999999998873
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.19 E-value=0.048 Score=51.74 Aligned_cols=141 Identities=15% Similarity=0.175 Sum_probs=89.7
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCC-cccCccc----c----------ccCCcchHHH-
Q 003103 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS-SLLGQDK----D----------ASIAALPVDE- 558 (847)
Q Consensus 495 r~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~-~~~~~~~----~----------~~~~~~~~~~- 558 (847)
-||+.++++.+++. ....++|---.+-..++|+.+|++.+..... .+...+. . ...+.+++.+
T Consensus 83 vpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~e~ 161 (308)
T d1y8aa1 83 VPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELFRK 161 (308)
T ss_dssp CTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred cCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCceeecccccccccCCChHHHHHHHHHhhhccCccHHHHHHH
Confidence 57999999999887 6788888788888999999999963211000 0000000 0 0011111111
Q ss_pred ------------HHHhcCeEEEeChhhHHHHHHHHhh-cC-CEEEEEcCCcCChhhhhhcCc--ceecc-cccHHHhhcc
Q 003103 559 ------------LIEKADGFAGVFPEHKYEIVKRLQE-RK-HICGMTGDGVNDAPALKKADI--GIAVA-DATDAARSAS 621 (847)
Q Consensus 559 ------------~~~~~~v~ar~sP~qK~~iV~~lq~-~g-~~V~miGDG~ND~~aLk~AdV--GIamg-~g~~~a~~aa 621 (847)
+++.+... --..|.++++..-+ .+ ..-+++||.+.|..+|+.|.= |+|++ +|.+=|...|
T Consensus 162 ~d~~f~~~e~~~i~e~Vk~V---Ggg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal~eA 238 (308)
T d1y8aa1 162 LDELFSRSEVRKIVESVKAV---GAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYALKHA 238 (308)
T ss_dssp HHHHHHSHHHHHHHHTCBCC---CHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHHTTC
T ss_pred HHHHhccchHhhHHhhhccc---CCchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCcccccccc
Confidence 12222211 12456666543322 12 223789999999999998854 89998 8999999999
Q ss_pred CEEEcCCChhhHHHHHHH
Q 003103 622 DIVLTEPGLSVIISAVLT 639 (847)
Q Consensus 622 Divl~~~~~~~i~~~i~~ 639 (847)
|+.+.+++...+...+..
T Consensus 239 ~VaiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 239 DVVIISPTAMSEAKVIEL 256 (308)
T ss_dssp SEEEECSSTHHHHHHHHH
T ss_pred ceEEeccchhHHHHHHHH
Confidence 999999888777766654
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=94.19 E-value=0.025 Score=53.40 Aligned_cols=89 Identities=21% Similarity=0.273 Sum_probs=62.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEe
Q 003103 494 PRHDSAETIRRALNLGVNVKMITGDQL----AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (847)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~miTGD~~----~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 569 (847)
+.|++.+.++.+++.|++|.-+||... .|+...-+.+|++..... .. ++.+-
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~-~v-----------------------ll~~~ 142 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMN-PV-----------------------IFAGD 142 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBC-CC-----------------------EECCC
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCccccc-ce-----------------------EeeCC
Confidence 467999999999999999999999643 567777777898642111 11 12211
Q ss_pred --ChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCc-ceec
Q 003103 570 --FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAV 610 (847)
Q Consensus 570 --sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIam 610 (847)
..+.|.+.|+. -.+++++||..+|..|-++|++ +|-+
T Consensus 143 ~~~K~~rr~~Ik~----y~I~l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 143 KPGQNTKSQWLQD----KNIRIFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp CTTCCCSHHHHHH----TTEEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred CCCchHHHHHHHH----cCeEEEecCCHHHHhHHHHcCCCceEe
Confidence 12345555543 3589999999999999999986 5544
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=93.29 E-value=0.038 Score=54.20 Aligned_cols=36 Identities=11% Similarity=0.133 Sum_probs=29.1
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc
Q 003103 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (847)
Q Consensus 495 r~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~ 530 (847)
=+++.++|+.|+++|++++.+|+....+...+++++
T Consensus 20 i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 20 IPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 378999999999999999999987766666655543
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=91.66 E-value=0.078 Score=50.10 Aligned_cols=122 Identities=8% Similarity=0.046 Sum_probs=77.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
.+.+++.++++.+++.|+++.++|+-........-+..|+.... + ..+...+.. ..+-.|+
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~f-d-~~~~s~~~~-----------------~~KP~p~ 153 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF-D-HLLSVDPVQ-----------------VYKPDNR 153 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC-S-EEEESGGGT-----------------CCTTSHH
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccc-c-ceeeeeeee-----------------ccccHHH
Confidence 45689999999999999999999999998888888887774311 0 011000000 0111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcceec-c---cccHHHhhccCEEEcCCChhhHHH
Q 003103 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-A---DATDAARSASDIVLTEPGLSVIIS 635 (847)
Q Consensus 573 qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVGIam-g---~g~~~a~~aaDivl~~~~~~~i~~ 635 (847)
-=....+.+.-....++||||..+|+.+-++|++--.. . ...+-....+|+++ +++..+++
T Consensus 154 ~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i--~~l~el~~ 218 (220)
T d1zrna_ 154 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVE 218 (220)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHT
T ss_pred HHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEE--CCHHHHHh
Confidence 22233344433345689999999999999999986443 2 11222234579988 66777654
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=91.64 E-value=0.057 Score=51.29 Aligned_cols=109 Identities=8% Similarity=0.025 Sum_probs=66.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
.++-|++.+.++.|++.|+++.++|+... +...-+..|+..... ..+.+.+ .....|
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~--~i~~~~~-------------------~~~~KP 146 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFD--AIADPAE-------------------VAASKP 146 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCS--EECCTTT-------------------SSSCTT
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhccccccc--ccccccc-------------------cccccc
Confidence 45678999999999999999999999765 456677788753211 0111100 001122
Q ss_pred hhH--HHHHHHHhhcCCEEEEEcCCcCChhhhhhcCc-ceecccccHHHhhccCEEE
Q 003103 572 EHK--YEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVL 625 (847)
Q Consensus 572 ~qK--~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIamg~g~~~a~~aaDivl 625 (847)
+-+ ....+.+.-..+.+.|+||..+|..|-+.|++ .|+++.+. ....++.++
T Consensus 147 ~~~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~~--~~~~~~~~~ 201 (221)
T d1o08a_ 147 APDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPE--DLGDDIVIV 201 (221)
T ss_dssp STHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHH--HHCSSSEEE
T ss_pred ChHHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEECChh--hcccccEEc
Confidence 221 12223332234558899999999999999987 44554433 233466655
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=91.45 E-value=0.092 Score=49.75 Aligned_cols=123 Identities=10% Similarity=0.075 Sum_probs=74.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeChh
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP~ 572 (847)
.+.+++.+.+++|+ .+..++|+-....+..+-+++|+...... ....+.... ..+..|+
T Consensus 85 ~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~~-~~~~~~~~~-----------------~~~~KP~ 143 (222)
T d2fdra1 85 KIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFAP-HIYSAKDLG-----------------ADRVKPK 143 (222)
T ss_dssp CBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTTT-CEEEHHHHC-----------------TTCCTTS
T ss_pred chhhhHHHHhhhcc---ccceeeeecchhhhhhhhcccccccccce-eeccccccc-----------------ccccccC
Confidence 45778888777665 45678999999999999999998642111 111000000 0112232
Q ss_pred hH--HHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc-eeccccc--------HHHhhccCEEEcCCChhhHHHHHH
Q 003103 573 HK--YEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADAT--------DAARSASDIVLTEPGLSVIISAVL 638 (847)
Q Consensus 573 qK--~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg~g~--------~~a~~aaDivl~~~~~~~i~~~i~ 638 (847)
.. ....+.+.-....+.||||..+|..+=+.|++- |++..|. +....-||+++ +++..+..++.
T Consensus 144 ~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi--~~l~eL~~ll~ 218 (222)
T d2fdra1 144 PDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVI--SRMQDLPAVIA 218 (222)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHHH
T ss_pred HHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEE--CCHHHHHHHHH
Confidence 22 233333333345789999999999999999973 4443221 12233489999 66777776664
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=90.96 E-value=0.25 Score=48.04 Aligned_cols=59 Identities=29% Similarity=0.367 Sum_probs=39.3
Q ss_pred HHHHHhhcCCEEEEEcCCc-CChhhhhhcCc-ceecccc--c-HHHh---hccCEEEcCCChhhHHHHH
Q 003103 577 IVKRLQERKHICGMTGDGV-NDAPALKKADI-GIAVADA--T-DAAR---SASDIVLTEPGLSVIISAV 637 (847)
Q Consensus 577 iV~~lq~~g~~V~miGDG~-ND~~aLk~AdV-GIamg~g--~-~~a~---~aaDivl~~~~~~~i~~~i 637 (847)
..+.+.-....++||||.. ||..+-++|++ +|.+..| + +... ..+|+++ +++..+.++|
T Consensus 194 a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii--~~l~eL~~~l 260 (261)
T d1vjra_ 194 ISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVF--KNLGELAKAV 260 (261)
T ss_dssp HHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEE--SSHHHHHHHH
T ss_pred HHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEE--CCHHHHHHHh
Confidence 3344433446789999996 69999999997 5555322 1 1122 2359998 7888888776
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=90.78 E-value=0.1 Score=49.57 Aligned_cols=25 Identities=24% Similarity=0.238 Sum_probs=22.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcC
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITG 517 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTG 517 (847)
.+-|++.+++++|+++|+++.++|.
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTN 72 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTN 72 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEE
T ss_pred EecccHHHHHHHHHhhCCeEEEecc
Confidence 3568999999999999999999995
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=89.44 E-value=0.14 Score=48.32 Aligned_cols=106 Identities=9% Similarity=0.054 Sum_probs=64.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGD----QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD----~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 568 (847)
.+++++.+.++.|+++|+++.++|+- ............|+..-. + .+.+.+ +. -...
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~f-d--~i~~s~-----------~~-----~~~K 157 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHF-D--FLIESC-----------QV-----GMIK 157 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGC-S--EEEEHH-----------HH-----SCCT
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhh-c--eeeehh-----------hc-----cCCC
Confidence 46789999999999999999999962 223334444455543210 0 000000 00 0112
Q ss_pred eChhhHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCc-ceecccccHHH
Q 003103 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAA 617 (847)
Q Consensus 569 ~sP~qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIamg~g~~~a 617 (847)
-.|+--....+.++-....+.|+||..+|+.+-++|++ +|-+.++.+..
T Consensus 158 P~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~ 207 (222)
T d1cr6a1 158 PEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNTASAL 207 (222)
T ss_dssp TCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECCSSSHHH
T ss_pred CChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEECCcchHH
Confidence 23444445555655555668999999999999999997 55554554443
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.29 E-value=0.063 Score=51.37 Aligned_cols=46 Identities=22% Similarity=0.328 Sum_probs=31.3
Q ss_pred hHHHHHHHHhh-cCCEEEEEcC----CcCChhhhhhcC-cceecccccHHHh
Q 003103 573 HKYEIVKRLQE-RKHICGMTGD----GVNDAPALKKAD-IGIAVADATDAAR 618 (847)
Q Consensus 573 qK~~iV~~lq~-~g~~V~miGD----G~ND~~aLk~Ad-VGIamg~g~~~a~ 618 (847)
+|..-++.|.+ ....|.++|| |.||.+||+.|+ .|+++++..++.+
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~~~~ 236 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRR 236 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHH
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHHHHHH
Confidence 45554555443 3467899999 889999999997 6888877655433
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=87.22 E-value=0.59 Score=44.31 Aligned_cols=122 Identities=15% Similarity=0.101 Sum_probs=74.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEEeCh
Q 003103 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (847)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~sP 571 (847)
.++.+++.+++++|+ |+++.++|..+...+...-+..|+.... + ..+.+.+. .+..|
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~f-d-~v~~s~~~-------------------~~~KP 148 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF-D-AVISVDAK-------------------RVFKP 148 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC-S-EEEEGGGG-------------------TCCTT
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccccc-c-cccccccc-------------------cccCc
Confidence 356788999999885 6889999999988888888888875321 0 11111000 01122
Q ss_pred hhH--HHHHHHHhhcCCEEEEEcCCcCChhhhhhcCcc-eecc-cccHH-------------------------HhhccC
Q 003103 572 EHK--YEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVA-DATDA-------------------------ARSASD 622 (847)
Q Consensus 572 ~qK--~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdVG-Iamg-~g~~~-------------------------a~~aaD 622 (847)
+-. ....+.+.-..+.+.||||..+|+.+=++|++- |.+. .+... .....|
T Consensus 149 ~p~~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd 228 (245)
T d1qq5a_ 149 HPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPD 228 (245)
T ss_dssp SHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCS
T ss_pred cHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCC
Confidence 211 222333333334589999999999999998863 2221 11100 012479
Q ss_pred EEEcCCChhhHHHHHH
Q 003103 623 IVLTEPGLSVIISAVL 638 (847)
Q Consensus 623 ivl~~~~~~~i~~~i~ 638 (847)
+++ +++..++.+|+
T Consensus 229 ~~i--~~l~el~~lv~ 242 (245)
T d1qq5a_ 229 FVV--PALGDLPRLVR 242 (245)
T ss_dssp EEE--SSGGGHHHHHH
T ss_pred EEE--CCHHHHHHHHH
Confidence 998 78999998876
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=86.56 E-value=0.46 Score=45.87 Aligned_cols=43 Identities=12% Similarity=0.036 Sum_probs=30.1
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHcCCC
Q 003103 491 FDPPRHDSAETIRRALNLGVNVKMITGDQ---LAIGKETGRRLGMG 533 (847)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~---~~tA~~iA~~~Gi~ 533 (847)
.+.+=|++.++|+.|+++|++++.+|+.. +....+.-+++|+.
T Consensus 17 ~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~ 62 (250)
T d2c4na1 17 DNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp TTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred CCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccc
Confidence 34444789999999999999999999644 33333333456764
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=85.99 E-value=0.47 Score=45.90 Aligned_cols=41 Identities=29% Similarity=0.282 Sum_probs=29.3
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCcC-ChhhhhhcCc-ceecc
Q 003103 571 PEHKYEIVKRLQERKHICGMTGDGVN-DAPALKKADI-GIAVA 611 (847)
Q Consensus 571 P~qK~~iV~~lq~~g~~V~miGDG~N-D~~aLk~AdV-GIamg 611 (847)
|+--....+.++-....++||||..+ |..+-++|++ +|.+.
T Consensus 183 p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~ 225 (253)
T d1wvia_ 183 AVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVT 225 (253)
T ss_dssp HHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEES
T ss_pred cccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEEC
Confidence 33334455555444567999999976 9999999998 66663
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.33 E-value=0.081 Score=49.75 Aligned_cols=102 Identities=11% Similarity=-0.001 Sum_probs=57.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHH----HHHHHHcCCCCCCCCCCcccCccccccCCcchHHHHHHhcCeEEE
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIG----KETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA----~~iA~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 568 (847)
++.+++.+.++.|++.|+++.++|+...... ...-...++.... + ..+... + ...
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~f-d-~i~~s~------------~-------~~~ 157 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHF-D-FLIESC------------Q-------VGM 157 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTS-S-EEEEHH------------H-------HTC
T ss_pred CCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhc-c-EEEecc------------c-------ccc
Confidence 3578999999999999999999997543221 1111222221100 0 000000 0 001
Q ss_pred eChh--hHHHHHHHHhhcCCEEEEEcCCcCChhhhhhcCc-ceecccccH
Q 003103 569 VFPE--HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADATD 615 (847)
Q Consensus 569 ~sP~--qK~~iV~~lq~~g~~V~miGDG~ND~~aLk~AdV-GIamg~g~~ 615 (847)
..|+ -=..+.+.+.-....+.||||...|+.+-++|++ +|.+.++.+
T Consensus 158 ~KP~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~~~ 207 (225)
T d1zd3a1 158 VKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTDT 207 (225)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSSHHH
T ss_pred chhHHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEECCcch
Confidence 1232 2223334443333567899999999999999999 666654433
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=80.22 E-value=0.15 Score=46.13 Aligned_cols=26 Identities=15% Similarity=0.158 Sum_probs=23.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC
Q 003103 493 PPRHDSAETIRRALNLGVNVKMITGD 518 (847)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~miTGD 518 (847)
.+-|++.++++.|++.|+++.++|.-
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq 55 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQ 55 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred eECccHHHHHHHHHHcCCceeeeccc
Confidence 34689999999999999999999974
|