Citrus Sinensis ID: 003145
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 844 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SYM4 | 942 | Alpha,alpha-trehalose-pho | yes | no | 0.945 | 0.847 | 0.832 | 0.0 | |
| Q9FZ57 | 822 | Probable alpha,alpha-treh | no | no | 0.832 | 0.855 | 0.662 | 0.0 | |
| Q9T079 | 795 | Probable alpha,alpha-treh | no | no | 0.838 | 0.890 | 0.659 | 0.0 | |
| Q9SHG0 | 783 | Probable alpha,alpha-treh | no | no | 0.808 | 0.871 | 0.626 | 0.0 | |
| Q54K57 | 733 | Alpha,alpha-trehalose-pho | yes | no | 0.784 | 0.903 | 0.424 | 1e-167 | |
| P40387 | 513 | Alpha,alpha-trehalose-pho | yes | no | 0.585 | 0.962 | 0.483 | 1e-135 | |
| Q00075 | 517 | Alpha,alpha-trehalose-pho | yes | no | 0.552 | 0.901 | 0.5 | 1e-134 | |
| O74932 | 469 | Alpha,alpha-trehalose-pho | yes | no | 0.540 | 0.972 | 0.505 | 1e-133 | |
| Q00764 | 495 | Alpha,alpha-trehalose-pho | yes | no | 0.543 | 0.927 | 0.497 | 1e-133 | |
| Q92410 | 478 | Alpha,alpha-trehalose-pho | N/A | no | 0.553 | 0.976 | 0.498 | 1e-133 |
| >sp|Q9SYM4|TPS1_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Arabidopsis thaliana GN=TPS1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 1384 bits (3581), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 669/804 (83%), Positives = 730/804 (90%), Gaps = 6/804 (0%)
Query: 1 MPGNSYNSNSSNIPPDRVTRLVREKIERDLRKSSRASHPNDVTDNGGREVFEDEQRLRDG 60
MPGN YN +SS+IP R RL+R++ R+ RKS+RA +PNDV G E E++ RL +G
Sbjct: 1 MPGNKYNCSSSHIPLSRTERLLRDRELREKRKSNRARNPNDVA--GSSENSENDLRL-EG 57
Query: 61 DNLGPSIVDEDLEGPASTPNEG--CERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSLE 118
D+ V++ LEG A+ CER + R ++RQRLLVVANRLPVSA+RRGEDSWSLE
Sbjct: 58 DS-SRQYVEQYLEGAAAAMAHDDACERQEVRPYNRQRLLVVANRLPVSAVRRGEDSWSLE 116
Query: 119 ISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYY 178
ISAGGLVSALLGVKEFEARWIGWAGVNVPDE+GQKAL+KALAEKRCIPVFLDE+IVHQYY
Sbjct: 117 ISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALSKALAEKRCIPVFLDEEIVHQYY 176
Query: 179 NGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCH 238
NGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAY KANQMFADVVN+HY++GDVVWCH
Sbjct: 177 NGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWCH 236
Query: 239 DYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDY 298
DYHLMFLPKCLKEYNS MKVGWFLHTPFPSSEIHRTLPSRS+LLR+VLAADLVGFHTYDY
Sbjct: 237 DYHLMFLPKCLKEYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDY 296
Query: 299 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQE 358
ARHFVSACTRILG EGTPEGVEDQGRLTRVAAFPIGIDS+RFIRALE+ V H+KEL+E
Sbjct: 297 ARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALEVPEVIQHMKELKE 356
Query: 359 TFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRL 418
FAGRKVMLGVDRLDMIKGIPQK+LAFEKFLEEN++WR KVVLLQIAVPTRTDVPEYQ+L
Sbjct: 357 RFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENANWRDKVVLLQIAVPTRTDVPEYQKL 416
Query: 419 TSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYE 478
TSQVHEIVGRINGRFGTLTAVPIHHLDRSLDF ALCALYAVTDVALVTSLRDGMNLVSYE
Sbjct: 417 TSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYE 476
Query: 479 FVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWH 538
FVACQ+ KKGVLILSEFAGAAQSLGAGAILVNPWNITEVA +I +ALNM+ EEREKRH H
Sbjct: 477 FVACQEAKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGQALNMTAEEREKRHRH 536
Query: 539 NFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGF 598
NF HV THTAQEWAETFVSELNDTV+EAQLRI +VPP L + D+I+RY +SNNRLLILGF
Sbjct: 537 NFHHVKTHTAQEWAETFVSELNDTVIEAQLRISKVPPELPQHDAIQRYSKSNNRLLILGF 596
Query: 599 NATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658
NATLTEPVD GRRGDQI+EM+L LHP+LK PL ALC DP TTIVVLSGS R+VLDKNF
Sbjct: 597 NATLTEPVDNQGRRGDQIKEMDLNLHPELKGPLKALCSDPSTTIVVLSGSSRSVLDKNFG 656
Query: 659 EYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSL 718
EY++WLAAENGMFLR T G+WMTTMPEHLNMEWVDS+KHVF+YFTERTPRSHFE R+TSL
Sbjct: 657 EYDMWLAAENGMFLRLTNGEWMTTMPEHLNMEWVDSVKHVFKYFTERTPRSHFETRDTSL 716
Query: 719 VWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILA 778
+WNYKYAD+EFGR+QARD+LQHLWTGPISNASV+VVQGS+SVEVRAVGVTKGAAIDRIL
Sbjct: 717 IWNYKYADIEFGRLQARDLLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILG 776
Query: 779 EIVHSKKMKTAIDYVLCIGHFLGK 802
EIVHSK M T IDYVLCIGHFLGK
Sbjct: 777 EIVHSKSMTTPIDYVLCIGHFLGK 800
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Required for normal embryo development, vegetative growth and transition to flowering. Regulates embryo growth, cell wall deposition, starch and sucrose degradation, but not cell differentiation. Involved in the regulation of glucose sensing and signaling genes during plant development. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 5 |
| >sp|Q9FZ57|TPS2_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2 OS=Arabidopsis thaliana GN=TPS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1010 bits (2611), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/711 (66%), Positives = 592/711 (83%), Gaps = 8/711 (1%)
Query: 93 RQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIG 151
R RLLVVANRLPVSA R GE+SWSLE+S GGLVS LLG+ +F+ +W+GW GV+V DEI
Sbjct: 11 RPRLLVVANRLPVSAKRTGENSWSLEMSPGGLVSGLLGITSQFDTKWVGWPGVDVHDEIE 70
Query: 152 QKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQF 211
+ ALT++LAE +CIPVFL+ + QYYNGYCN ILWP+ H++GLPQED+ T ++F++Q+
Sbjct: 71 KNALTESLAEMKCIPVFLN-GVFDQYYNGYCNGILWPILHHMGLPQEDQHDTNQTFETQY 129
Query: 212 AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI 271
AY KAN+MF DV+ +Y++GD+VWCHDYHLMFLP+ LKEYN+ +KVGWFLH+PFPSSE+
Sbjct: 130 DAYKKANRMFLDVIIDNYEEGDIVWCHDYHLMFLPQYLKEYNNKIKVGWFLHSPFPSSEV 189
Query: 272 HRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAF 331
++TLPSRS+LLRA+LAADL+GFHTYD+ARHF+S CTRILG EGT EGV QGR+TRVA F
Sbjct: 190 YKTLPSRSELLRAILAADLLGFHTYDFARHFLSTCTRILGVEGTHEGVVYQGRVTRVAVF 249
Query: 332 PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEE 391
PIGID +RFIR ++ V + ELQE FAG+KV+LGVDRLDMIKGIPQK LAFEKFLEE
Sbjct: 250 PIGIDPDRFIRTCKLPEVTQQMNELQEKFAGKKVILGVDRLDMIKGIPQKYLAFEKFLEE 309
Query: 392 NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFP 451
N WR KVVL+QIAVPTR DVPEY++L SQVH +VGRINGRFG+++++PIHHLD S+DF
Sbjct: 310 NPYWRDKVVLVQIAVPTRNDVPEYRKLKSQVHGLVGRINGRFGSVSSLPIHHLDCSVDFN 369
Query: 452 ALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNP 511
LCA+YA+ DV LVTSLRDGMNLVSYEFVACQ+ KKGVL+LSEFAGA QSLG GA++VNP
Sbjct: 370 YLCAIYAIADVMLVTSLRDGMNLVSYEFVACQEAKKGVLVLSEFAGAGQSLGVGALIVNP 429
Query: 512 WNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIK 571
W++TEV++AI ALNM EERE RH NF +V TH+A++W F+SELN + E++++++
Sbjct: 430 WDVTEVSSAIKEALNMPAEERETRHRSNFQYVCTHSAEKWGLDFMSELNGIIPESEMQMR 489
Query: 572 QVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPL 631
++P L E D I++Y +SNNRL+ILGF TL EP+++ +EM+LKL+P+LK L
Sbjct: 490 KIPLQLPEQDVIQQYSQSNNRLIILGFFGTLAEPMNS------GTKEMDLKLNPELKGTL 543
Query: 632 NALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEW 691
ALC+DPKTT+VVLS S +N+L+KNF E N+WLAAENGMF + TTG+W+T MP+++N++W
Sbjct: 544 KALCNDPKTTVVVLSRSGKNILNKNFGESNIWLAAENGMFEKQTTGEWVTNMPQNVNLDW 603
Query: 692 VDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASV 751
VD +K+VF+YFT+RTPRS+FE ETSLVWNY+YADVEFGR QARD+LQ+LW GPISNASV
Sbjct: 604 VDGVKNVFKYFTDRTPRSYFEASETSLVWNYEYADVEFGRAQARDLLQYLWAGPISNASV 663
Query: 752 EVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGK 802
+VV+G+ SVEV A+G TKGAAI RIL EIVH K M T ID+V C G+FL K
Sbjct: 664 DVVRGNHSVEVHAIGETKGAAIGRILGEIVHRKSMTTPIDFVFCSGYFLEK 714
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9T079|TPS4_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 4 OS=Arabidopsis thaliana GN=TPS4 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 993 bits (2566), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/722 (65%), Positives = 574/722 (79%), Gaps = 14/722 (1%)
Query: 91 FSRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEI 150
+R RLLVV+ LPV+A R GE+SWS +S GGLVSALLG+KEFE +WIGW GV+V D I
Sbjct: 1 MARPRLLVVSMSLPVTAKRTGEESWSFTMSPGGLVSALLGLKEFETKWIGWPGVDVHDAI 60
Query: 151 GQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQ 210
G+K L+ LAEK CIPVFL+E + QYYNGYCNNILWP+FHYLG P E R T ++QSQ
Sbjct: 61 GKKTLSITLAEKGCIPVFLEE-VCDQYYNGYCNNILWPIFHYLGTPPEYRNDATITYQSQ 119
Query: 211 FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSE 270
+ AY KANQ+F DVV +HY++GDVVWCHDYH+M LP+ LKEYNS MKVGWFLHTPFPSSE
Sbjct: 120 YEAYKKANQIFFDVVKEHYEEGDVVWCHDYHVMLLPQYLKEYNSKMKVGWFLHTPFPSSE 179
Query: 271 IHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAA 330
+++TLPSRSDLLR+VL ADLVGFHTYD+ARHF++AC ILG E T EG+ DQG++TRVA
Sbjct: 180 MYKTLPSRSDLLRSVLTADLVGFHTYDFARHFLNACMCILGVEATSEGIVDQGKVTRVAV 239
Query: 331 FPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390
FPIGI+ ERFI E++ V ++K+ + F GRK++LGVDRLD IKGIPQK AFEKFLE
Sbjct: 240 FPIGIEPERFINTSELSEVVQYMKKFKNDFGGRKLILGVDRLDTIKGIPQKYQAFEKFLE 299
Query: 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDF 450
EN++WRGKV+LLQIAVPTR + EYQ++ Q H VGRINGRFG++++VPI HLD S+DF
Sbjct: 300 ENAEWRGKVMLLQIAVPTRNGIGEYQKIKDQCHYHVGRINGRFGSISSVPIIHLDCSIDF 359
Query: 451 PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVN 510
LCALYA+TDV LVTSLRDGMNLVS EF+ACQ +KGVLILSEFAGA QSLGAGAILVN
Sbjct: 360 NQLCALYAITDVLLVTSLRDGMNLVSSEFIACQKAEKGVLILSEFAGAGQSLGAGAILVN 419
Query: 511 PWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV---------SELND 561
PWNI EV++AI ALNMS EE+E++H NF +V TH+ Q+WA+ F+ S+L +
Sbjct: 420 PWNIKEVSSAIGEALNMSHEEKERKHKINFQYVKTHSTQQWADDFMKLTLTNILCSKLIE 479
Query: 562 TVVEAQLRIKQVPP-SLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREME 620
A+L L E D I++Y +SNNRLLILGF TLT+P+ RRGD M
Sbjct: 480 ITTSAELGAGLAATLELPEHDVIQQYSKSNNRLLILGFYGTLTQPMKNQERRGDG---MN 536
Query: 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWM 680
L+LHP LK+ L LC DPKTT+VVLS S++ +LDKNF EYN+WLAAENGMFLR T+G+W+
Sbjct: 537 LELHPQLKERLKELCSDPKTTVVVLSRSEKCILDKNFGEYNMWLAAENGMFLRHTSGEWV 596
Query: 681 TTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQH 740
T +PEH+N+EW+D +KHVF+YFTERTP S+ E E SLVWNY+ AD EFGR QARDMLQH
Sbjct: 597 TRIPEHMNLEWIDGVKHVFKYFTERTPGSYLETSEASLVWNYENADAEFGRAQARDMLQH 656
Query: 741 LWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL 800
LW GPISNASV+VV+G +SVEV AVGVTKG+A++RIL EIVH+K M T IDYVLCIG FL
Sbjct: 657 LWAGPISNASVDVVRGGQSVEVHAVGVTKGSAMERILGEIVHNKSMATPIDYVLCIGCFL 716
Query: 801 GK 802
GK
Sbjct: 717 GK 718
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9SHG0|TPS3_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 3 OS=Arabidopsis thaliana GN=TPS3 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 937 bits (2422), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/710 (62%), Positives = 559/710 (78%), Gaps = 28/710 (3%)
Query: 93 RQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQ 152
RQ LLVVANRLP SA R GE SWSLE+S GG + L + +
Sbjct: 10 RQTLLVVANRLPASAKRTGEHSWSLEMSPGGKFNLL---------------------VEK 48
Query: 153 KALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFA 212
A++K+LAE +CIPVFL+E + QYYNGY N ILWP+ H++GLPQE T ++F++Q+
Sbjct: 49 DAVSKSLAEMKCIPVFLNE-VFDQYYNGYSNGILWPILHHMGLPQEYDHDTIKTFETQYD 107
Query: 213 AYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIH 272
AY KAN+MF DV+ ++YKDGD+VWC DYHLMFLP+ LKEYN+ +KVGWFLH+PFPSSEI+
Sbjct: 108 AYKKANRMFLDVIKENYKDGDIVWCQDYHLMFLPQYLKEYNNKIKVGWFLHSPFPSSEIY 167
Query: 273 RTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFP 332
+TLPSRS+LLR+VLAADL+ FHTYD+ARHFV+ CTRILG EGT EGV QGR+TRV P
Sbjct: 168 KTLPSRSELLRSVLAADLISFHTYDFARHFVNTCTRILGVEGTHEGVVYQGRVTRVVVLP 227
Query: 333 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN 392
+GI RFI+ ++ V + EL++ F+G+KV+LGVDRLDMIKGIPQK L FEKFL+EN
Sbjct: 228 MGIYPNRFIKTCKLPEVIQQMNELKDRFSGKKVILGVDRLDMIKGIPQKYLGFEKFLDEN 287
Query: 393 SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPA 452
+WR K+VL+QIAVPTR +VPEYQ+L +QVH +VGRINGRFG+++++PIHH+D S+D
Sbjct: 288 PNWRDKIVLVQIAVPTRNEVPEYQKLKNQVHRLVGRINGRFGSVSSLPIHHMDCSVDSNY 347
Query: 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW 512
LCALYA++DV LVTSLRDG+NLVS+EFVACQ+ K+GVLILSEFAGA QSLGAGA+LVNPW
Sbjct: 348 LCALYAISDVMLVTSLRDGLNLVSHEFVACQEAKRGVLILSEFAGAGQSLGAGALLVNPW 407
Query: 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQ 572
N+TEV++AI +ALNM EERE RH NF +V TH+A++W F+SELND E++L+I++
Sbjct: 408 NVTEVSSAIKKALNMPYEERETRHRVNFKYVKTHSAEKWGFDFLSELNDAFDESELQIRK 467
Query: 573 VPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLN 632
+P L + D I+RY SNNRL+ILGF T+TEP R +EM+LKL+P+LK+ L
Sbjct: 468 IPHELPQQDVIQRYSLSNNRLIILGFYGTITEP------RNSLSKEMDLKLNPELKETLK 521
Query: 633 ALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWV 692
ALC+DPKTT+VVLS S +N+LDKNF EY +WLAAENGMFL+ TT +W+T MP+++N++WV
Sbjct: 522 ALCNDPKTTVVVLSRSGKNILDKNFGEYKIWLAAENGMFLKHTTEEWVTNMPQNMNLDWV 581
Query: 693 DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVE 752
D LK+VF+YFT+RTPRS FE +TSLVWNY+YADVEFGR QARD+LQ+LW GPISNAS E
Sbjct: 582 DGLKNVFKYFTDRTPRSFFEASKTSLVWNYEYADVEFGRAQARDLLQYLWAGPISNASAE 641
Query: 753 VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGK 802
VV+G SVEV A+GVTK I IL EIVH K M T IDYV C G+FL K
Sbjct: 642 VVRGKYSVEVHAIGVTKEPEIGHILGEIVHKKAMTTPIDYVFCSGYFLEK 691
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q54K57|TPSA_DICDI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A OS=Dictyostelium discoideum GN=tpsA PE=2 SV=1 | Back alignment and function description |
|---|
Score = 588 bits (1515), Expect = e-167, Method: Compositional matrix adjust.
Identities = 303/714 (42%), Positives = 448/714 (62%), Gaps = 52/714 (7%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKA 154
RL+VV+NRLPVS + WS ++S+GGLV+AL G+K W+GW G + ++ ++
Sbjct: 17 RLIVVSNRLPVSIKKESNGKWSCKMSSGGLVAALSGLKS-NFIWVGWIGAEIEEDDRKEI 75
Query: 155 LTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYL--GLPQEDRLATTRSFQSQFA 212
+ CIPVFL E + +++YNG+ N +LWPLFHYL L +DR+ +
Sbjct: 76 KELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPLFHYLPGDLDYDDRI---------WN 126
Query: 213 AYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIH 272
+Y++AN+ F+ VV + K D+VW HDYH+M LP+ LK+ D ++G+FLH PFPSSEI
Sbjct: 127 SYVEANEQFSSVVAEILKPNDLVWVHDYHMMLLPEILKQKKPDARIGFFLHIPFPSSEIF 186
Query: 273 RTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFP 332
R LP R ++L +L L+GFHTYDYARHF+ +CTRI+G E P GV + R +V FP
Sbjct: 187 RVLPCRKEILLGILNCCLIGFHTYDYARHFLKSCTRIVGLETAPNGVYFKDRFVQVGVFP 246
Query: 333 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN 392
+GID ++F +L+ VQ IKEL+E+F G KV++G+DRLD IKGIPQKL A E+ ++
Sbjct: 247 VGIDPDKFFESLKTTQVQNRIKELKESFEGTKVLIGIDRLDYIKGIPQKLQAIERLFQKY 306
Query: 393 SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPA 452
+W+GK+VL+Q+AVP+R DV EYQ+L +V E+VGRING +G++ PIH+L +S+D
Sbjct: 307 PEWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLYGSIGYSPIHYLFQSVDPSE 366
Query: 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW 512
L ALY ++D AL+TS+RDGMNLV+ E++ CQ GVLILSEF GAAQSL +GA+++NPW
Sbjct: 367 LTALYNISDAALITSIRDGMNLVAQEYIVCQTENNGVLILSEFTGAAQSL-SGAVMINPW 425
Query: 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN------DTVVEA 566
N EVA++I +L M PEERE++H +VT HTA W FV ELN D +V
Sbjct: 426 NTEEVADSIHNSLLMPPEEREEKHQMLLKYVTKHTASHWGLGFVKELNKASSNTDKMVTI 485
Query: 567 Q-LRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPG-RRGDQIREMELKLH 624
Q L I++V ++ Y +S RLLI ++ TL + P R Q
Sbjct: 486 QKLDIEKV---------VDIYKQSKRRLLIFAYDGTLIPYNNVPQLSRPSQ--------- 527
Query: 625 PDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCT-TGKWMTTM 683
+L + L +DPKT + +LSG D+ L + F + L+AE G F + + +W +
Sbjct: 528 -ELLNSFDILSNDPKTDVYILSGRDKKTLSEWFLGIQIGLSAEYGCFFKLPESTEWEQQV 586
Query: 684 PEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWT 743
P +++ W ++++ +F+YFT RTP S FE++E W+Y+ AD FG IQAR++ HL
Sbjct: 587 PS-MDLSWKETIRPLFKYFTLRTPGSFFEEKEMLFTWHYRNADPIFGSIQARELHLHL-- 643
Query: 744 GPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797
N ++V+ G K++ VR+ + +++ +++ + + +D +L IG
Sbjct: 644 ---DNLPLDVIVGDKTLGVRSYNINPLSSMKKVITDTI-----PKGLDLILLIG 689
|
Synthesizes trehalose 6-phosphate, the precursor for the production of trehalose, the main carbohydrate storage reserve of the dormant spore. Trehalose accumulates in both prestalk and prespore cells and then is rapidly metabolized during terminal differentiation of stalk cells, while being stored in spores, where it serves as the principal energy and carbon source for germination. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|P40387|TPS1_SCHPO Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tps1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 484 bits (1246), Expect = e-135, Method: Compositional matrix adjust.
Identities = 245/507 (48%), Positives = 335/507 (66%), Gaps = 13/507 (2%)
Query: 77 STPNEGCERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEA 136
S ++ + L G + +RL+VV+NRLP++ R+ ++ +S+GGLVSAL G+K+
Sbjct: 2 SDAHDTIKSLTGDASNSRRLIVVSNRLPITIKRKDNGTYDFSMSSGGLVSALSGLKKLMT 61
Query: 137 -RWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGL 195
+W+GW G +P++ + + E IPVFLD++ ++YNG+ N+ILWPLFHY
Sbjct: 62 FQWLGWCGQEIPEDEKPMIIQRLQDECSAIPVFLDDETADRHYNGFSNSILWPLFHYH-- 119
Query: 196 PQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY--- 252
P E + + AY AN FA+ + K+ +DGD++W DYHLM LP+ L+E
Sbjct: 120 PGEINFD-----EENWEAYRAANYAFAEAIVKNLQDGDLIWVQDYHLMVLPQMLRELIGD 174
Query: 253 -NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILG 311
D+K+G+FLHTPFPSSEI+R LP R+++L VL DLVGFHTYDYARHF+SAC+RIL
Sbjct: 175 KFKDIKIGFFLHTPFPSSEIYRVLPVRNEILEGVLNCDLVGFHTYDYARHFLSACSRILN 234
Query: 312 FEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDR 371
P GVE G++ V FPIGID E+F AL+ + V+ I ++ G KV++GVDR
Sbjct: 235 LSTLPNGVEYNGQMVSVGTFPIGIDPEKFSDALKSDVVKDRIASIERRLQGVKVIVGVDR 294
Query: 372 LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRING 431
LD IKG+PQK AFE FLE+ +W GKVVL+Q+AVP+R DV EYQ L + V+E+VGRING
Sbjct: 295 LDYIKGVPQKFHAFEVFLEQYPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRING 354
Query: 432 RFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLI 491
RFGT+ PIH L +S+ F L ALY V+DV L+TS RDGMNLVSYE++ Q + G LI
Sbjct: 355 RFGTVEYTPIHFLHKSVRFEELVALYNVSDVCLITSTRDGMNLVSYEYICTQQERHGALI 414
Query: 492 LSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEW 551
LSEFAGAAQSL G+I++NPWN E+AN+I AL M ++RE F +V +T+Q W
Sbjct: 415 LSEFAGAAQSLN-GSIVINPWNTEELANSIHDALTMPEKQREANENKLFRYVNKYTSQFW 473
Query: 552 AETFVSELNDTVVEAQLRIKQVPPSLR 578
++FV EL + ++ P LR
Sbjct: 474 GQSFVGELQRIQHYSHPHPRRTNPILR 500
|
Appears to have a role in spore germination. In S.pombe it appears to have no role in the control of the initial steps of glycolysis. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q00075|TPSA_ASPNG Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Aspergillus niger GN=tpsA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 480 bits (1236), Expect = e-134, Method: Compositional matrix adjust.
Identities = 240/480 (50%), Positives = 329/480 (68%), Gaps = 14/480 (2%)
Query: 86 LDGRTFSRQ-RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAG 143
L+ TF + RLL+V+NRLP++ R + + +S+GGLVS L G+ K +W GW G
Sbjct: 4 LENPTFQNEARLLLVSNRLPITIKRSDDGRYDFSMSSGGLVSGLSGLSKSTTFQWYGWPG 63
Query: 144 VNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLAT 203
+ VP+E + E +PVF+D+++ ++YNG+ N+ILWPLFHY P E
Sbjct: 64 LEVPEEEIPVVKERLKQEYNAVPVFIDDELADRHYNGFSNSILWPLFHYH--PGEITFD- 120
Query: 204 TRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSD----MKVG 259
+S + AY +AN++FA V K +DGD++W HDYHLM LP+ L+E D +K+G
Sbjct: 121 ----ESAWEAYKEANRLFAKAVAKEVQDGDLIWVHDYHLMLLPEMLREEIGDSKENVKIG 176
Query: 260 WFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGV 319
+FLHTPFPSSEI+R LP R++LL VL DL+GFHTYDY RHF+SAC+R+LG TP G+
Sbjct: 177 FFLHTPFPSSEIYRILPVRNELLLGVLHCDLIGFHTYDYTRHFLSACSRLLGLTTTPNGI 236
Query: 320 EDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIP 379
E QG++ AFPIGID E+F L+ VQ I L++ F G K+M+GVDRLD IKG+P
Sbjct: 237 EFQGKIIACGAFPIGIDPEKFEEGLKKEKVQKRIAMLEQKFQGVKLMVGVDRLDYIKGVP 296
Query: 380 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439
QKL A E FL ++ +W GKVVL+Q+AVP+R DV EYQ L + V+E+VGRING+FGT+ +
Sbjct: 297 QKLHALEVFLSDHPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGKFGTVEFM 356
Query: 440 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA 499
PIH L +S++F L ALYAV+D +V+S RDGMNLV+YE++A Q + GVL+LSEFAGAA
Sbjct: 357 PIHFLHKSVNFDELIALYAVSDACIVSSTRDGMNLVAYEYIATQKKRHGVLVLSEFAGAA 416
Query: 500 QSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559
QSL G+I++NPWN E+A A A+ MS E+R +V +T+ W ++FV+EL
Sbjct: 417 QSLN-GSIIINPWNTEELAGAYQEAVTMSDEQRALNFSKLDKYVNKYTSAFWGQSFVTEL 475
|
Aspergillus niger (taxid: 5061) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|O74932|TPS1_YARLI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=TPS1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 478 bits (1229), Expect = e-133, Method: Compositional matrix adjust.
Identities = 238/471 (50%), Positives = 322/471 (68%), Gaps = 15/471 (3%)
Query: 96 LLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEA-RWIGWAGVNVPDEIGQKA 154
+LV++NRLPV+ R + ++ +S+GGLV+AL G+K+ +W GW G+ +P++ +
Sbjct: 4 VLVISNRLPVTISREEDGTYKYTMSSGGLVTALSGLKQSTTFQWFGWPGLEIPEKDKPRL 63
Query: 155 LTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAY 214
+ C+PVF+D+D+ +YNG+ N+ILWPLFHY P E Q + AY
Sbjct: 64 INDLETMFSCVPVFMDDDLADLHYNGFSNSILWPLFHYH--PGEMNFD-----QVAWEAY 116
Query: 215 IKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSD------MKVGWFLHTPFPS 268
+AN++FA V K GD+VW HDYHLM LP+ L+E + +K+G+FLHTPFPS
Sbjct: 117 TQANRLFAKKVASIVKPGDIVWVHDYHLMLLPEMLREECENNSALDGLKIGFFLHTPFPS 176
Query: 269 SEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRV 328
SEI+R LP R ++L VL+ +L+GFHTYDYARHF+S+ +RIL E P G +GR V
Sbjct: 177 SEIYRILPVRKEVLTGVLSCNLIGFHTYDYARHFLSSVSRILDLETMPNGTYYKGRHVVV 236
Query: 329 AAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388
AFPIGID +F+ + VQ I +LQ+ F G KV++GVDRLD IKG+PQKL AFE F
Sbjct: 237 GAFPIGIDVNKFLEGCKRPAVQERIAQLQDKFKGIKVVVGVDRLDYIKGVPQKLHAFEVF 296
Query: 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448
L E+ +W GKVVL+Q+AVP+R V EYQ L + V+E+VGRING FGT+ PIH + RS+
Sbjct: 297 LSEHPEWIGKVVLVQVAVPSRGLVEEYQNLRAVVNELVGRINGMFGTVEFTPIHFMHRSV 356
Query: 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAIL 508
DF L ALY+++DV V+S RDGMNLVSYE+VACQ K G LILSEF GAAQSL GA++
Sbjct: 357 DFNELIALYSISDVCFVSSTRDGMNLVSYEYVACQTEKHGSLILSEFTGAAQSLN-GALI 415
Query: 509 VNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559
VNPWN ++A A+ +L SPE++ + H F +V+ +T+Q W E FVSEL
Sbjct: 416 VNPWNTEDMAEALYDSLTFSPEKKAENHRKLFKYVSKYTSQHWGEAFVSEL 466
|
Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q00764|TPS1_YEAST Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 56 kDa subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPS1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 477 bits (1228), Expect = e-133, Method: Compositional matrix adjust.
Identities = 237/476 (49%), Positives = 329/476 (69%), Gaps = 17/476 (3%)
Query: 92 SRQRLLVVANRLPVSAIRRGEDS-WSLEISAGGLVSALLGVKE-FEARWIGWAGVNVPDE 149
S ++VV+NRLPV+ + + +S+GGLV+AL G+K+ + +W GW G+ +PD+
Sbjct: 14 SGGNIIVVSNRLPVTITKNSSTGQYEYAMSSGGLVTALEGLKKTYTFKWFGWPGLEIPDD 73
Query: 150 IGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQS 209
+ L + +P+FL ++I +YNG+ N+ILWPLFHY P E ++
Sbjct: 74 EKDQVRKDLLEKFNAVPIFLSDEIADLHYNGFSNSILWPLFHYH--PGEINFD-----EN 126
Query: 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLK-----EYNSDMKVGWFLHT 264
+ AY +ANQ F + + K D++W HDYHLM +P+ L+ + ++KVGWFLHT
Sbjct: 127 AWLAYNEANQTFTNEIAKTMNHNDLIWVHDYHLMLVPEMLRVKIHEKQLQNVKVGWFLHT 186
Query: 265 PFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGR 324
PFPSSEI+R LP R ++L+ VL+ DLVGFHTYDYARHF+S+ R+L P GVE QGR
Sbjct: 187 PFPSSEIYRILPVRQEILKGVLSCDLVGFHTYDYARHFLSSVQRVLNVNTLPNGVEYQGR 246
Query: 325 LTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 384
V AFPIGID ++F L+ VQ I++L+ETF G K+++GVDRLD IKG+PQKL A
Sbjct: 247 FVNVGAFPIGIDVDKFTDGLKKESVQKRIQQLKETFKGCKIIVGVDRLDYIKGVPQKLHA 306
Query: 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHL 444
E FL E+ +WRGKVVL+Q+AVP+R DV EYQ L S V+E+VGRING+FGT+ VPIH +
Sbjct: 307 MEVFLNEHPEWRGKVVLVQVAVPSRGDVEEYQYLRSVVNELVGRINGQFGTVEFVPIHFM 366
Query: 445 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGA 504
+S+ F L +LYAV+DV LV+S RDGMNLVSYE++ACQ+ KKG LILSEF GAAQSL
Sbjct: 367 HKSIPFEELISLYAVSDVCLVSSTRDGMNLVSYEYIACQEEKKGSLILSEFTGAAQSLN- 425
Query: 505 GAILVNPWNITEVANAIARALNMSPEEREKRHWHN-FTHVTTHTAQEWAETFVSEL 559
GAI+VNPWN ++++AI AL + P+ +++ +W + +++ +T+ W E FV EL
Sbjct: 426 GAIIVNPWNTDDLSDAINEALTL-PDVKKEVNWEKLYKYISKYTSAFWGENFVHEL 480
|
Synthase catalytic subunit of the trehalose synthase complex that catalyzes the production of trehalose from glucose-6-phosphate and UDP-glucose in a two step process. Can function independently of the complex. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q92410|TPS1_CANAL Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=TPS1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 476 bits (1226), Expect = e-133, Method: Compositional matrix adjust.
Identities = 240/481 (49%), Positives = 330/481 (68%), Gaps = 14/481 (2%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEF-EARWIGWAGVNVPDEIGQK 153
++LVV+NR+PV+ R S+ +S+GGLV+AL G+K+ E +W GW G+ +P++ K
Sbjct: 5 KVLVVSNRIPVTIKRLDNGSYDYSMSSGGLVTALQGLKKTTEFQWYGWPGLEIPEDEQTK 64
Query: 154 ALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAA 213
+ ++ C +FL + I +YNG+ N+ILWPLFHY P E ++ +AA
Sbjct: 65 VNDELKSKFNCTAIFLSDTIADLHYNGFSNSILWPLFHYH--PGEMNFD-----ENAWAA 117
Query: 214 YIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE----YNSDMKVGWFLHTPFPSS 269
YI+AN+ FA + K D D++W HDYHLM LP+ L++ ++K+G+FLHTPFPSS
Sbjct: 118 YIEANKKFALEIVKQVNDDDMIWVHDYHLMLLPEMLRQEIGNKKKNIKIGFFLHTPFPSS 177
Query: 270 EIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGT-PEGVEDQGRLTRV 328
EI+R LP R ++L VL+ DL+GFHTYDYARHF+S+ +RI+ T P G++ QGR +
Sbjct: 178 EIYRILPVRKEILEGVLSCDLIGFHTYDYARHFISSVSRIVPNVSTLPNGIKYQGRSISI 237
Query: 329 AAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388
AFPIGID + FI L+ + V IK+L+ F KV++GVDRLD IKG+PQKL AFE F
Sbjct: 238 GAFPIGIDVDNFIDGLKKDSVVERIKQLKSKFKDVKVIVGVDRLDYIKGVPQKLHAFEVF 297
Query: 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448
L EN +W GKVVL+Q+AVP+R DV EYQ L S V E+VGRING FGT+ VPIH+L +S+
Sbjct: 298 LNENPEWIGKVVLVQVAVPSRGDVEEYQSLRSTVSELVGRINGEFGTVEFVPIHYLHKSI 357
Query: 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAIL 508
F L +LY ++DV LV+S RDGMNLVSYE++ACQ +KGVLILSEFAGAAQSL GA++
Sbjct: 358 PFDELISLYNISDVCLVSSTRDGMNLVSYEYIACQQDRKGVLILSEFAGAAQSLN-GALI 416
Query: 509 VNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQL 568
VNPWN +++ AI +L + E+RE FT+++ +T+ W E+FV EL + L
Sbjct: 417 VNPWNTEDLSEAIKESLTLPEEKREFNFKKLFTYISKYTSGFWGESFVKELYKCNPQKSL 476
Query: 569 R 569
R
Sbjct: 477 R 477
|
Candida albicans (strain SC5314 / ATCC MYA-2876) (taxid: 237561) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 844 | ||||||
| TAIR|locus:2202990 | 942 | TPS1 "trehalose-6-phosphate sy | 0.945 | 0.847 | 0.809 | 0.0 | |
| TAIR|locus:2137712 | 795 | TPS4 "trehalose-6-phosphatase | 0.867 | 0.920 | 0.625 | 1.3e-251 | |
| DICTYBASE|DDB_G0287657 | 733 | tpsA "alpha,alpha-trehalose-ph | 0.797 | 0.918 | 0.420 | 1e-146 | |
| UNIPROTKB|G4NHF4 | 529 | MGG_03860 "Alpha,alpha-trehalo | 0.541 | 0.863 | 0.5 | 2e-118 | |
| POMBASE|SPAC328.03 | 513 | tps1 "alpha,alpha-trehalose-ph | 0.562 | 0.925 | 0.481 | 2.6e-118 | |
| ASPGD|ASPL0000027021 | 504 | tpsA [Emericella nidulans (tax | 0.561 | 0.940 | 0.484 | 1.1e-117 | |
| SGD|S000000330 | 495 | TPS1 "Synthase subunit of treh | 0.541 | 0.923 | 0.489 | 1.1e-117 | |
| CGD|CAL0004028 | 478 | TPS1 [Candida albicans (taxid: | 0.553 | 0.976 | 0.486 | 2.1e-116 | |
| UNIPROTKB|Q92410 | 478 | TPS1 "Alpha,alpha-trehalose-ph | 0.553 | 0.976 | 0.486 | 2.1e-116 | |
| TAIR|locus:2199847 | 867 | TPS9 "trehalose-phosphatase/sy | 0.577 | 0.561 | 0.360 | 3.7e-116 |
| TAIR|locus:2202990 TPS1 "trehalose-6-phosphate synthase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3401 (1202.3 bits), Expect = 0., P = 0.
Identities = 651/804 (80%), Positives = 710/804 (88%)
Query: 1 MPGXXXXXXXXXIPPDRVTRLVREKIERDLRKSSRASHPNDVTDNGGREVFEDEQRLRDG 60
MPG IP R RL+R++ R+ RKS+RA +PNDV G E E++ RL +G
Sbjct: 1 MPGNKYNCSSSHIPLSRTERLLRDRELREKRKSNRARNPNDVA--GSSENSENDLRL-EG 57
Query: 61 DNLGPSIVDEDLEGPASTP--NEGCERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSLE 118
D+ V++ LEG A+ ++ CER + R ++RQRLLVVANRLPVSA+RRGEDSWSLE
Sbjct: 58 DS-SRQYVEQYLEGAAAAMAHDDACERQEVRPYNRQRLLVVANRLPVSAVRRGEDSWSLE 116
Query: 119 ISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYY 178
ISAGGLVSALLGVKEFEARWIGWAGVNVPDE+GQKAL+KALAEKRCIPVFLDE+IVHQYY
Sbjct: 117 ISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALSKALAEKRCIPVFLDEEIVHQYY 176
Query: 179 NGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCH 238
NGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAY KANQMFADVVN+HY++GDVVWCH
Sbjct: 177 NGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWCH 236
Query: 239 DYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDY 298
DYHLMFLPKCLKEYNS MKVGWFLHTPFPSSEIHRTLP GFHTYDY
Sbjct: 237 DYHLMFLPKCLKEYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDY 296
Query: 299 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQE 358
ARHFVSACTRILG EGTPEGVEDQGRLTRVAAFPIGIDS+RFIRALE+ V H+KEL+E
Sbjct: 297 ARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALEVPEVIQHMKELKE 356
Query: 359 TFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRL 418
FAGRKVMLGVDRLDMIKGIPQK+LAFEKFLEEN++WR KVVLLQIAVPTRTDVPEYQ+L
Sbjct: 357 RFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENANWRDKVVLLQIAVPTRTDVPEYQKL 416
Query: 419 TSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYE 478
TSQVHEIVGRINGRFGTLTAVPIHHLDRSLDF ALCALYAVTDVALVTSLRDGMNLVSYE
Sbjct: 417 TSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYE 476
Query: 479 FVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWH 538
FVACQ+ KKGVLILSEFAGAAQSLGAGAILVNPWNITEVA +I +ALNM+ EEREKRH H
Sbjct: 477 FVACQEAKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGQALNMTAEEREKRHRH 536
Query: 539 NFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGF 598
NF HV THTAQEWAETFVSELNDTV+EAQLRI +VPP L + D+I+RY +SNNRLLILGF
Sbjct: 537 NFHHVKTHTAQEWAETFVSELNDTVIEAQLRISKVPPELPQHDAIQRYSKSNNRLLILGF 596
Query: 599 NATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658
NATLTEPVD GRRGDQI+EM+L LHP+LK PL ALC DP TTIVVLSGS R+VLDKNF
Sbjct: 597 NATLTEPVDNQGRRGDQIKEMDLNLHPELKGPLKALCSDPSTTIVVLSGSSRSVLDKNFG 656
Query: 659 EYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSL 718
EY++WLAAENGMFLR T G+WMTTMPEHLNMEWVDS+KHVF+YFTERTPRSHFE R+TSL
Sbjct: 657 EYDMWLAAENGMFLRLTNGEWMTTMPEHLNMEWVDSVKHVFKYFTERTPRSHFETRDTSL 716
Query: 719 VWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILA 778
+WNYKYAD+EFGR+QARD+LQHLWTGPISNASV+VVQGS+SVEVRAVGVTKGAAIDRIL
Sbjct: 717 IWNYKYADIEFGRLQARDLLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILG 776
Query: 779 EIVHSKKMKTAIDYVLCIGHFLGK 802
EIVHSK M T IDYVLCIGHFLGK
Sbjct: 777 EIVHSKSMTTPIDYVLCIGHFLGK 800
|
|
| TAIR|locus:2137712 TPS4 "trehalose-6-phosphatase synthase S4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2423 (858.0 bits), Expect = 1.3e-251, P = 1.3e-251
Identities = 470/751 (62%), Positives = 573/751 (76%)
Query: 92 SRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIG 151
+R RLLVV+ LPV+A R GE+SWS +S GGLVSALLG+KEFE +WIGW GV+V D IG
Sbjct: 2 ARPRLLVVSMSLPVTAKRTGEESWSFTMSPGGLVSALLGLKEFETKWIGWPGVDVHDAIG 61
Query: 152 QKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQF 211
+K L+ LAEK CIPVFL+E + QYYNGYCNNILWP+FHYLG P E R T ++QSQ+
Sbjct: 62 KKTLSITLAEKGCIPVFLEE-VCDQYYNGYCNNILWPIFHYLGTPPEYRNDATITYQSQY 120
Query: 212 AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI 271
AY KANQ+F DVV +HY++GDVVWCHDYH+M LP+ LKEYNS MKVGWFLHTPFPSSE+
Sbjct: 121 EAYKKANQIFFDVVKEHYEEGDVVWCHDYHVMLLPQYLKEYNSKMKVGWFLHTPFPSSEM 180
Query: 272 HRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAF 331
++TLP GFHTYD+ARHF++AC ILG E T EG+ DQG++TRVA F
Sbjct: 181 YKTLPSRSDLLRSVLTADLVGFHTYDFARHFLNACMCILGVEATSEGIVDQGKVTRVAVF 240
Query: 332 PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEE 391
PIGI+ ERFI E++ V ++K+ + F GRK++LGVDRLD IKGIPQK AFEKFLEE
Sbjct: 241 PIGIEPERFINTSELSEVVQYMKKFKNDFGGRKLILGVDRLDTIKGIPQKYQAFEKFLEE 300
Query: 392 NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFP 451
N++WRGKV+LLQIAVPTR + EYQ++ Q H VGRINGRFG++++VPI HLD S+DF
Sbjct: 301 NAEWRGKVMLLQIAVPTRNGIGEYQKIKDQCHYHVGRINGRFGSISSVPIIHLDCSIDFN 360
Query: 452 ALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNP 511
LCALYA+TDV LVTSLRDGMNLVS EF+ACQ +KGVLILSEFAGA QSLGAGAILVNP
Sbjct: 361 QLCALYAITDVLLVTSLRDGMNLVSSEFIACQKAEKGVLILSEFAGAGQSLGAGAILVNP 420
Query: 512 WNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV---------SELNDT 562
WNI EV++AI ALNMS EE+E++H NF +V TH+ Q+WA+ F+ S+L +
Sbjct: 421 WNIKEVSSAIGEALNMSHEEKERKHKINFQYVKTHSTQQWADDFMKLTLTNILCSKLIEI 480
Query: 563 VVEAQLRIKQVPP-SLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMEL 621
A+L L E D I++Y +SNNRLLILGF TLT+P+ RRGD M L
Sbjct: 481 TTSAELGAGLAATLELPEHDVIQQYSKSNNRLLILGFYGTLTQPMKNQERRGDG---MNL 537
Query: 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMT 681
+LHP LK+ L LC DPKTT+VVLS S++ +LDKNF EYN+WLAAENGMFLR T+G+W+T
Sbjct: 538 ELHPQLKERLKELCSDPKTTVVVLSRSEKCILDKNFGEYNMWLAAENGMFLRHTSGEWVT 597
Query: 682 TMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHL 741
+PEH+N+EW+D +KHVF+YFTERTP S+ E E SLVWNY+ AD EFGR QARDMLQHL
Sbjct: 598 RIPEHMNLEWIDGVKHVFKYFTERTPGSYLETSEASLVWNYENADAEFGRAQARDMLQHL 657
Query: 742 WTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG 801
W GPISNASV+VV+G +SVEV AVGVTKG+A++RIL EIVH+K M T IDYVLCIG FLG
Sbjct: 658 WAGPISNASVDVVRGGQSVEVHAVGVTKGSAMERILGEIVHNKSMATPIDYVLCIGCFLG 717
Query: 802 KV--LLTQF---LIQVGSSINSLSKEKKRKV 827
K + T F L + S++S + +KV
Sbjct: 718 KDEDVYTFFEPELTKKAKSLSSSGSDSPKKV 748
|
|
| DICTYBASE|DDB_G0287657 tpsA "alpha,alpha-trehalose-phosphate synthase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 1433 (509.5 bits), Expect = 1.0e-146, P = 1.0e-146
Identities = 295/701 (42%), Positives = 425/701 (60%)
Query: 80 NEGCERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWI 139
NE L+ T RL+VV+NRLPVS + WS ++S+GGLV+AL G+K W+
Sbjct: 2 NENDNNLENETGFSGRLIVVSNRLPVSIKKESNGKWSCKMSSGGLVAALSGLKS-NFIWV 60
Query: 140 GWAGVNVPDEIGQKALTKAL-AEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYL--GLP 196
GW G + +E +K + + L + CIPVFL E + +++YNG+ N +LWPLFHYL L
Sbjct: 61 GWIGAEI-EEDDRKEIKELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPLFHYLPGDLD 119
Query: 197 QEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDM 256
+DR+ + +Y++AN+ F+ VV + K D+VW HDYH+M LP+ LK+ D
Sbjct: 120 YDDRI---------WNSYVEANEQFSSVVAEILKPNDLVWVHDYHMMLLPEILKQKKPDA 170
Query: 257 KVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGFEGTP 316
++G+FLH PFPSSEI R LP GFHTYDYARHF+ +CTRI+G E P
Sbjct: 171 RIGFFLHIPFPSSEIFRVLPCRKEILLGILNCCLIGFHTYDYARHFLKSCTRIVGLETAP 230
Query: 317 EGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIK 376
GV + R +V FP+GID ++F +L+ VQ IKEL+E+F G KV++G+DRLD IK
Sbjct: 231 NGVYFKDRFVQVGVFPVGIDPDKFFESLKTTQVQNRIKELKESFEGTKVLIGIDRLDYIK 290
Query: 377 GIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTL 436
GIPQKL A E+ ++ +W+GK+VL+Q+AVP+R DV EYQ+L +V E+VGRING +G++
Sbjct: 291 GIPQKLQAIERLFQKYPEWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLYGSI 350
Query: 437 TAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA 496
PIH+L +S+D L ALY ++D AL+TS+RDGMNLV+ E++ CQ GVLILSEF
Sbjct: 351 GYSPIHYLFQSVDPSELTALYNISDAALITSIRDGMNLVAQEYIVCQTENNGVLILSEFT 410
Query: 497 GAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV 556
GAAQSL +GA+++NPWN EVA++I +L M PEERE++H +VT HTA W FV
Sbjct: 411 GAAQSL-SGAVMINPWNTEEVADSIHNSLLMPPEEREEKHQMLLKYVTKHTASHWGLGFV 469
Query: 557 SELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQI 616
ELN + + + ++ Y +S RLLI ++ TL + P Q+
Sbjct: 470 KELNKASSNTDKMVTIQKLDIEKV--VDIYKQSKRRLLIFAYDGTLIPYNNVP-----QL 522
Query: 617 REMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTT 676
+L + L +DPKT + +LSG D+ L + F + L+AE G F +
Sbjct: 523 SRPS----QELLNSFDILSNDPKTDVYILSGRDKKTLSEWFLGIQIGLSAEYGCFFKLPE 578
Query: 677 G-KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQAR 735
+W +P +++ W ++++ +F+YFT RTP S FE++E W+Y+ AD FG IQAR
Sbjct: 579 STEWEQQVPS-MDLSWKETIRPLFKYFTLRTPGSFFEEKEMLFTWHYRNADPIFGSIQAR 637
Query: 736 DMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRI 776
++ HL P+ + G +S + + K D I
Sbjct: 638 ELHLHLDNLPLDVIVGDKTLGVRSYNINPLSSMKKVITDTI 678
|
|
| UNIPROTKB|G4NHF4 MGG_03860 "Alpha,alpha-trehalose-phosphate synthase 1" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 1166 (415.5 bits), Expect = 2.0e-118, P = 2.0e-118
Identities = 236/472 (50%), Positives = 318/472 (67%)
Query: 95 RLLVVANRLPVSAIRRGEDS-WSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQ 152
RLL+++NRLP++ I+R +D +S +S+GGLV+ L G+ K +W GW G+ VPD
Sbjct: 15 RLLLISNRLPIT-IKRSDDGQYSFSMSSGGLVTGLSGLAKTTSFQWYGWPGLEVPDAEAG 73
Query: 153 KALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFA 212
+ + E PVF+D+++ ++YNG+ N+ILWPLFHY P E +S ++
Sbjct: 74 PVVQRLKNEYGAHPVFVDDELADRHYNGFANSILWPLFHYH--PGEITFD-----ESAWS 126
Query: 213 AYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSD----MKVGWFLHTPFPS 268
AY + N++FA V K +DGD++W HDYHLM LP+ L+E D +K+G+FLHTPFPS
Sbjct: 127 AYKEVNRLFAQTVVKDVQDGDMIWVHDYHLMLLPEMLREEIGDSKKNVKIGFFLHTPFPS 186
Query: 269 SEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRV 328
SEI+R LP GFHTYDYARHF+S+C+RIL TP GV+ GR V
Sbjct: 187 SEIYRILPVRQALLQGVLHCDLLGFHTYDYARHFLSSCSRILSAPTTPNGVQFAGRFVTV 246
Query: 329 AAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388
AFPIGID E+F+ L+ VQ I L F G K+++GVDRLD IKG+PQKL A E F
Sbjct: 247 GAFPIGIDPEKFVEGLQKPKVQQRIAALTRKFEGVKLIVGVDRLDYIKGVPQKLHALEVF 306
Query: 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448
L E+ +W GK+VL+Q+AVP+R DV EYQ L + V+E+VGRING+FGT+ +PIH L +S+
Sbjct: 307 LTEHPEWIGKIVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGKFGTIEFMPIHFLHQSV 366
Query: 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAIL 508
F L ALYAV+DV LV+S RDGMNLVSYE++A Q + GV+ILSEF GAAQSL +G+++
Sbjct: 367 SFDELAALYAVSDVCLVSSTRDGMNLVSYEYIATQRDRHGVMILSEFTGAAQSL-SGSLI 425
Query: 509 VNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 560
VNPWN E+ANAI A+ M PE+RE +V +T+ W +FV+ELN
Sbjct: 426 VNPWNTEELANAIHDAVTMGPEQREANFKKLERYVFKYTSAWWGSSFVAELN 477
|
|
| POMBASE|SPAC328.03 tps1 "alpha,alpha-trehalose-phosphate synthase [UDP-forming]" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 1165 (415.2 bits), Expect = 2.6e-118, P = 2.6e-118
Identities = 235/488 (48%), Positives = 319/488 (65%)
Query: 77 STPNEGCERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEA 136
S ++ + L G + +RL+VV+NRLP++ R+ ++ +S+GGLVSAL G+K+
Sbjct: 2 SDAHDTIKSLTGDASNSRRLIVVSNRLPITIKRKDNGTYDFSMSSGGLVSALSGLKKLMT 61
Query: 137 -RWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGL 195
+W+GW G +P++ + + E IPVFLD++ ++YNG+ N+ILWPLFHY
Sbjct: 62 FQWLGWCGQEIPEDEKPMIIQRLQDECSAIPVFLDDETADRHYNGFSNSILWPLFHYH-- 119
Query: 196 PQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSD 255
P E + + AY AN FA+ + K+ +DGD++W DYHLM LP+ L+E D
Sbjct: 120 PGEINFD-----EENWEAYRAANYAFAEAIVKNLQDGDLIWVQDYHLMVLPQMLRELIGD 174
Query: 256 ----MKVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILG 311
+K+G+FLHTPFPSSEI+R LP GFHTYDYARHF+SAC+RIL
Sbjct: 175 KFKDIKIGFFLHTPFPSSEIYRVLPVRNEILEGVLNCDLVGFHTYDYARHFLSACSRILN 234
Query: 312 FEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDR 371
P GVE G++ V FPIGID E+F AL+ + V+ I ++ G KV++GVDR
Sbjct: 235 LSTLPNGVEYNGQMVSVGTFPIGIDPEKFSDALKSDVVKDRIASIERRLQGVKVIVGVDR 294
Query: 372 LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRING 431
LD IKG+PQK AFE FLE+ +W GKVVL+Q+AVP+R DV EYQ L + V+E+VGRING
Sbjct: 295 LDYIKGVPQKFHAFEVFLEQYPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRING 354
Query: 432 RFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLI 491
RFGT+ PIH L +S+ F L ALY V+DV L+TS RDGMNLVSYE++ Q + G LI
Sbjct: 355 RFGTVEYTPIHFLHKSVRFEELVALYNVSDVCLITSTRDGMNLVSYEYICTQQERHGALI 414
Query: 492 LSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEW 551
LSEFAGAAQSL G+I++NPWN E+AN+I AL M ++RE F +V +T+Q W
Sbjct: 415 LSEFAGAAQSLN-GSIVINPWNTEELANSIHDALTMPEKQREANENKLFRYVNKYTSQFW 473
Query: 552 AETFVSEL 559
++FV EL
Sbjct: 474 GQSFVGEL 481
|
|
| ASPGD|ASPL0000027021 tpsA [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 1159 (413.0 bits), Expect = 1.1e-117, P = 1.1e-117
Identities = 238/491 (48%), Positives = 326/491 (66%)
Query: 92 SRQRLLVVANRLPVSAIRRGEDS-WSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDE 149
+ RLL+V+NRLP++ I+R ED + +S+GGLVS L G+ K +W GW G+ VP+E
Sbjct: 10 NESRLLLVSNRLPIT-IKRSEDGKYDFSMSSGGLVSGLSGLSKTTTFQWYGWPGLEVPEE 68
Query: 150 IGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQS 209
+ E IPVF+D+++ ++YNG+ N+ILWPLFHY P E +S
Sbjct: 69 EIPTLKNRLKEEYNAIPVFIDDELADRHYNGFSNSILWPLFHYH--PGEITFD-----ES 121
Query: 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY--NS--DMKVGWFLHTP 265
+ AY +AN++FA V +DGD++W HDYHLM LP+ L+E N+ ++K+G+FLHTP
Sbjct: 122 AWEAYKEANRLFAQAVASQVQDGDLIWVHDYHLMLLPEMLREEIGNTKKNIKIGFFLHTP 181
Query: 266 FPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRL 325
FPSSEI+R LP GFHTYDY RHF+SAC+R+LG TP G+E QG++
Sbjct: 182 FPSSEIYRILPVRNELLLGLLHCDLIGFHTYDYTRHFLSACSRLLGLPTTPNGIEFQGKI 241
Query: 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAF 385
AFPIGID E+F L+ VQ I L++ F G K+M+GVDRLD IKG+PQKL A
Sbjct: 242 IACGAFPIGIDPEKFKEGLKKEKVQKRIATLEQKFQGVKLMVGVDRLDYIKGVPQKLHAL 301
Query: 386 EKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD 445
E FL ++ +W GKVVL+Q+AVP+R DV EYQ L + V+E+VGRING+FGT+ +PIH L
Sbjct: 302 EVFLSDHPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGKFGTVEFMPIHFLH 361
Query: 446 RSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAG 505
+S++F L ALYAV+D +V+S RDGMNLVSYE++A Q+ + G L+LSEFAGAAQSL G
Sbjct: 362 KSVNFDELIALYAVSDACVVSSTRDGMNLVSYEYIATQEKRHGSLVLSEFAGAAQSLN-G 420
Query: 506 AILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 565
+I+VNPWN E+A A A+ MS E+R +V +T+ W ++FV+EL +
Sbjct: 421 SIIVNPWNTEELAAAYHEAVTMSDEQRALNFSKLDKYVNKYTSAFWGQSFVTELTRISEQ 480
Query: 566 A--QLRIKQVP 574
A +L K+ P
Sbjct: 481 AAGKLPTKETP 491
|
|
| SGD|S000000330 TPS1 "Synthase subunit of trehalose-6-P synthase/phosphatase complex" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 1159 (413.0 bits), Expect = 1.1e-117, P = 1.1e-117
Identities = 233/476 (48%), Positives = 321/476 (67%)
Query: 96 LLVVANRLPVSAIRRGEDS-WSLEISAGGLVSALLGVKE-FEARWIGWAGVNVPDEIGQK 153
++VV+NRLPV+ + + +S+GGLV+AL G+K+ + +W GW G+ +PD+ +
Sbjct: 18 IIVVSNRLPVTITKNSSTGQYEYAMSSGGLVTALEGLKKTYTFKWFGWPGLEIPDD-EKD 76
Query: 154 ALTKALAEK-RCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFA 212
+ K L EK +P+FL ++I +YNG+ N+ILWPLFHY P E ++ +
Sbjct: 77 QVRKDLLEKFNAVPIFLSDEIADLHYNGFSNSILWPLFHYH--PGEINFD-----ENAWL 129
Query: 213 AYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLK-----EYNSDMKVGWFLHTPFP 267
AY +ANQ F + + K D++W HDYHLM +P+ L+ + ++KVGWFLHTPFP
Sbjct: 130 AYNEANQTFTNEIAKTMNHNDLIWVHDYHLMLVPEMLRVKIHEKQLQNVKVGWFLHTPFP 189
Query: 268 SSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTR 327
SSEI+R LP GFHTYDYARHF+S+ R+L P GVE QGR
Sbjct: 190 SSEIYRILPVRQEILKGVLSCDLVGFHTYDYARHFLSSVQRVLNVNTLPNGVEYQGRFVN 249
Query: 328 VAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEK 387
V AFPIGID ++F L+ VQ I++L+ETF G K+++GVDRLD IKG+PQKL A E
Sbjct: 250 VGAFPIGIDVDKFTDGLKKESVQKRIQQLKETFKGCKIIVGVDRLDYIKGVPQKLHAMEV 309
Query: 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS 447
FL E+ +WRGKVVL+Q+AVP+R DV EYQ L S V+E+VGRING+FGT+ VPIH + +S
Sbjct: 310 FLNEHPEWRGKVVLVQVAVPSRGDVEEYQYLRSVVNELVGRINGQFGTVEFVPIHFMHKS 369
Query: 448 LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAI 507
+ F L +LYAV+DV LV+S RDGMNLVSYE++ACQ+ KKG LILSEF GAAQSL GAI
Sbjct: 370 IPFEELISLYAVSDVCLVSSTRDGMNLVSYEYIACQEEKKGSLILSEFTGAAQSLN-GAI 428
Query: 508 LVNPWNITEVANAIARALNMSPEEREKRHWHN-FTHVTTHTAQEWAETFVSELNDT 562
+VNPWN ++++AI AL + P+ +++ +W + +++ +T+ W E FV EL T
Sbjct: 429 IVNPWNTDDLSDAINEALTL-PDVKKEVNWEKLYKYISKYTSAFWGENFVHELYST 483
|
|
| CGD|CAL0004028 TPS1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 1147 (408.8 bits), Expect = 2.1e-116, P = 2.1e-116
Identities = 234/481 (48%), Positives = 320/481 (66%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEF-EARWIGWAGVNVPDEIGQK 153
++LVV+NR+PV+ R S+ +S+GGLV+AL G+K+ E +W GW G+ +P++ K
Sbjct: 5 KVLVVSNRIPVTIKRLDNGSYDYSMSSGGLVTALQGLKKTTEFQWYGWPGLEIPEDEQTK 64
Query: 154 ALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAA 213
+ ++ C +FL + I +YNG+ N+ILWPLFHY P E ++ +AA
Sbjct: 65 VNDELKSKFNCTAIFLSDTIADLHYNGFSNSILWPLFHYH--PGEMNFD-----ENAWAA 117
Query: 214 YIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY----NSDMKVGWFLHTPFPSS 269
YI+AN+ FA + K D D++W HDYHLM LP+ L++ ++K+G+FLHTPFPSS
Sbjct: 118 YIEANKKFALEIVKQVNDDDMIWVHDYHLMLLPEMLRQEIGNKKKNIKIGFFLHTPFPSS 177
Query: 270 EIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGFEGT-PEGVEDQGRLTRV 328
EI+R LP GFHTYDYARHF+S+ +RI+ T P G++ QGR +
Sbjct: 178 EIYRILPVRKEILEGVLSCDLIGFHTYDYARHFISSVSRIVPNVSTLPNGIKYQGRSISI 237
Query: 329 AAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388
AFPIGID + FI L+ + V IK+L+ F KV++GVDRLD IKG+PQKL AFE F
Sbjct: 238 GAFPIGIDVDNFIDGLKKDSVVERIKQLKSKFKDVKVIVGVDRLDYIKGVPQKLHAFEVF 297
Query: 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448
L EN +W GKVVL+Q+AVP+R DV EYQ L S V E+VGRING FGT+ VPIH+L +S+
Sbjct: 298 LNENPEWIGKVVLVQVAVPSRGDVEEYQSLRSTVSELVGRINGEFGTVEFVPIHYLHKSI 357
Query: 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAIL 508
F L +LY ++DV LV+S RDGMNLVSYE++ACQ +KGVLILSEFAGAAQSL GA++
Sbjct: 358 PFDELISLYNISDVCLVSSTRDGMNLVSYEYIACQQDRKGVLILSEFAGAAQSLN-GALI 416
Query: 509 VNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQL 568
VNPWN +++ AI +L + E+RE FT+++ +T+ W E+FV EL + L
Sbjct: 417 VNPWNTEDLSEAIKESLTLPEEKREFNFKKLFTYISKYTSGFWGESFVKELYKCNPQKSL 476
Query: 569 R 569
R
Sbjct: 477 R 477
|
|
| UNIPROTKB|Q92410 TPS1 "Alpha,alpha-trehalose-phosphate synthase [UDP-forming]" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
Score = 1147 (408.8 bits), Expect = 2.1e-116, P = 2.1e-116
Identities = 234/481 (48%), Positives = 320/481 (66%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEF-EARWIGWAGVNVPDEIGQK 153
++LVV+NR+PV+ R S+ +S+GGLV+AL G+K+ E +W GW G+ +P++ K
Sbjct: 5 KVLVVSNRIPVTIKRLDNGSYDYSMSSGGLVTALQGLKKTTEFQWYGWPGLEIPEDEQTK 64
Query: 154 ALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAA 213
+ ++ C +FL + I +YNG+ N+ILWPLFHY P E ++ +AA
Sbjct: 65 VNDELKSKFNCTAIFLSDTIADLHYNGFSNSILWPLFHYH--PGEMNFD-----ENAWAA 117
Query: 214 YIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY----NSDMKVGWFLHTPFPSS 269
YI+AN+ FA + K D D++W HDYHLM LP+ L++ ++K+G+FLHTPFPSS
Sbjct: 118 YIEANKKFALEIVKQVNDDDMIWVHDYHLMLLPEMLRQEIGNKKKNIKIGFFLHTPFPSS 177
Query: 270 EIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGFEGT-PEGVEDQGRLTRV 328
EI+R LP GFHTYDYARHF+S+ +RI+ T P G++ QGR +
Sbjct: 178 EIYRILPVRKEILEGVLSCDLIGFHTYDYARHFISSVSRIVPNVSTLPNGIKYQGRSISI 237
Query: 329 AAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388
AFPIGID + FI L+ + V IK+L+ F KV++GVDRLD IKG+PQKL AFE F
Sbjct: 238 GAFPIGIDVDNFIDGLKKDSVVERIKQLKSKFKDVKVIVGVDRLDYIKGVPQKLHAFEVF 297
Query: 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448
L EN +W GKVVL+Q+AVP+R DV EYQ L S V E+VGRING FGT+ VPIH+L +S+
Sbjct: 298 LNENPEWIGKVVLVQVAVPSRGDVEEYQSLRSTVSELVGRINGEFGTVEFVPIHYLHKSI 357
Query: 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAIL 508
F L +LY ++DV LV+S RDGMNLVSYE++ACQ +KGVLILSEFAGAAQSL GA++
Sbjct: 358 PFDELISLYNISDVCLVSSTRDGMNLVSYEYIACQQDRKGVLILSEFAGAAQSLN-GALI 416
Query: 509 VNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQL 568
VNPWN +++ AI +L + E+RE FT+++ +T+ W E+FV EL + L
Sbjct: 417 VNPWNTEDLSEAIKESLTLPEEKREFNFKKLFTYISKYTSGFWGESFVKELYKCNPQKSL 476
Query: 569 R 569
R
Sbjct: 477 R 477
|
|
| TAIR|locus:2199847 TPS9 "trehalose-phosphatase/synthase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 794 (284.6 bits), Expect = 3.7e-116, Sum P(2) = 3.7e-116
Identities = 187/519 (36%), Positives = 284/519 (54%)
Query: 65 PSIVDEDLEGPASTPNEGCERLDGRTFSRQRLLVVANRLPVSAIRRGEDS-WSLEISAGG 123
P I+ E L+G S +G ++ SR+R ++VAN LP+ A R E W
Sbjct: 34 PGIISE-LDGGYS---DGSSDVNSSNSSRERKIIVANMLPLQAKRDTETGQWCFSWDEDS 89
Query: 124 LVSALL-GVK-EFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGY 181
L+ L G + E +IG ++ ++ K L + C+P FL +++ ++Y G+
Sbjct: 90 LLLQLRDGFSSDTEFVYIGSLNADIGISEQEEVSHKLLLDFNCVPTFLPKEMQEKFYLGF 149
Query: 182 CNNILWPLFHYLGLPQ-EDRLATTRSFQSQFAAYIKANQMFAD-VVNKHYKDGDVVWCHD 239
C + LWPLFHY+ LP D R + + AY+ AN++F+D V+ + D VW HD
Sbjct: 150 CKHHLWPLFHYM-LPMFPDH--GDRFDRRLWQAYVSANKIFSDRVMEVINPEEDYVWIHD 206
Query: 240 YHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYA 299
YHLM LP L++ + +K+G+FLH+PFPSSEI+RTLP GFHT+DYA
Sbjct: 207 YHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDDLLRGLLNCDLIGFHTFDYA 266
Query: 300 RHFVSACTRILGFEGTPE----GVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKE 355
RHF+S C+R+LG + + G++ GR + P+GI R L + +KE
Sbjct: 267 RHFLSCCSRMLGLDYESKRGHIGLDYFGRTVFIKILPVGIHMGRLESVLNLPSTAAKMKE 326
Query: 356 LQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEY 415
+QE F G+K++LGVD +D+ KGI KL+A E+ E RGK+VL+QI P R +
Sbjct: 327 IQEQFKGKKLILGVDDMDIFKGISLKLIAMERLFETYWHMRGKLVLIQIVNPARATGKDV 386
Query: 416 QRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLV 475
+ + + RIN R+G+ P+ +DR + A YA+ D LV ++RDGMNLV
Sbjct: 387 EEAKKETYSTAKRINERYGSAGYQPVILIDRLVPRYEKTAYYAMADCCLVNAVRDGMNLV 446
Query: 476 SYEFVACQ------DLKKGV---------LILSEFAGAAQSLGAGAILVNPWNITEVANA 520
Y+++ C+ D G+ L++SEF G + SL +GAI VNPW++ VA A
Sbjct: 447 PYKYIICRQGTPGMDKAMGISHDSARTSMLVVSEFIGCSPSL-SGAIRVNPWDVDAVAEA 505
Query: 521 IARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559
+ AL M E+ RH ++ +V+TH WA++F+ +L
Sbjct: 506 VNLALTMGETEKRLRHEKHYHYVSTHDVGYWAKSFMQDL 544
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9SYM4 | TPS1_ARATH | 2, ., 4, ., 1, ., 1, 5 | 0.8320 | 0.9454 | 0.8471 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.983 |
| 4th Layer | 2.4.1.15 | 0.979 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 844 | |||
| PLN03064 | 934 | PLN03064, PLN03064, alpha,alpha-trehalose-phosphat | 0.0 | |
| PLN03063 | 797 | PLN03063, PLN03063, alpha,alpha-trehalose-phosphat | 0.0 | |
| TIGR02400 | 456 | TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-p | 0.0 | |
| pfam00982 | 470 | pfam00982, Glyco_transf_20, Glycosyltransferase fa | 0.0 | |
| PRK14501 | 726 | PRK14501, PRK14501, putative bifunctional trehalos | 0.0 | |
| cd03788 | 460 | cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase ( | 0.0 | |
| COG0380 | 486 | COG0380, OtsA, Trehalose-6-phosphate synthase [Car | 0.0 | |
| PLN02205 | 854 | PLN02205, PLN02205, alpha,alpha-trehalose-phosphat | 1e-147 | |
| PRK10117 | 474 | PRK10117, PRK10117, trehalose-6-phosphate synthase | 2e-86 | |
| TIGR02398 | 487 | TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosph | 2e-82 | |
| pfam02358 | 235 | pfam02358, Trehalose_PPase, Trehalose-phosphatase | 2e-68 | |
| COG1877 | 266 | COG1877, OtsB, Trehalose-6-phosphatase [Carbohydra | 2e-25 | |
| TIGR00685 | 244 | TIGR00685, T6PP, trehalose-phosphatase | 7e-12 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 3e-06 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 2e-05 | |
| cd04951 | 360 | cd04951, GT1_WbdM_like, This family is most closel | 8e-04 | |
| cd03792 | 372 | cd03792, GT1_Trehalose_phosphorylase, Trehalose ph | 0.001 |
| >gnl|CDD|215556 PLN03064, PLN03064, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 1675 bits (4340), Expect = 0.0
Identities = 690/805 (85%), Positives = 737/805 (91%), Gaps = 6/805 (0%)
Query: 1 MPGNSYNSNSSNIPPDRVTRLVREKIERDLRKSSRASHPNDVTD-NGGREVFEDEQRLRD 59
MPGN YN SS P RV RL+RE R+LRKS R+S+ ND D N G E FE++ RL +
Sbjct: 1 MPGNKYNGQSSVNPTSRVERLLRE---RELRKSERSSNANDDLDTNAGSEAFENDLRLSE 57
Query: 60 GDNLGPSIVDEDLEGPA--STPNEGCERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSL 117
GDN S V++ LEG A S +GCER +GR RQRLLVVANRLPVSA+RRGEDSWSL
Sbjct: 58 GDNDSSSHVEQLLEGAAAESALPDGCERQEGRRPLRQRLLVVANRLPVSAVRRGEDSWSL 117
Query: 118 EISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQY 177
EISAGGLVSALLGVKEFEARWIGWAGVNVPDE+GQKALTKALAEKRCIPVFLDE+IVHQY
Sbjct: 118 EISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALTKALAEKRCIPVFLDEEIVHQY 177
Query: 178 YNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWC 237
YNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAY KANQMFADVVN+HY++GDVVWC
Sbjct: 178 YNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWC 237
Query: 238 HDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYD 297
HDYHLMFLPKCLKEYNS+MKVGWFLHTPFPSSEIHRTLPSRS+LLR+VLAADLVGFHTYD
Sbjct: 238 HDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYD 297
Query: 298 YARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQ 357
YARHFVSACTRILG EGTPEGVEDQGRLTRVAAFPIGIDS+RFIRALE VQ HIKEL+
Sbjct: 298 YARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELK 357
Query: 358 ETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQR 417
E FAGRKVMLGVDRLDMIKGIPQK+LAFEKFLEEN +WR KVVLLQIAVPTRTDVPEYQ+
Sbjct: 358 ERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQK 417
Query: 418 LTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSY 477
LTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDF ALCALYAVTDVALVTSLRDGMNLVSY
Sbjct: 418 LTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSY 477
Query: 478 EFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHW 537
EFVACQD KKGVLILSEFAGAAQSLGAGAILVNPWNITEVA +IA+ALNM EEREKRH
Sbjct: 478 EFVACQDSKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHR 537
Query: 538 HNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILG 597
HNF HVTTHTAQEWAETFVSELNDTVVEAQLR +QVPP L D+I+RYL+SNNRLLILG
Sbjct: 538 HNFMHVTTHTAQEWAETFVSELNDTVVEAQLRTRQVPPQLPPEDAIQRYLQSNNRLLILG 597
Query: 598 FNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF 657
FNATLTEPVDTPGRRGDQI+EMEL+LHP+LK+PL ALC DPKTTIVVLSGSDR+VLD+NF
Sbjct: 598 FNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENF 657
Query: 658 QEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETS 717
E+++WLAAENGMFLR T G+WMTTMPEHLNM+WVDS+KHVFEYFTERTPRSHFE RETS
Sbjct: 658 GEFDMWLAAENGMFLRHTKGEWMTTMPEHLNMDWVDSVKHVFEYFTERTPRSHFETRETS 717
Query: 718 LVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRIL 777
LVWNYKYADVEFGR+QARDMLQHLWTGPISNA+V+VVQGS+SVEVR VGVTKGAAIDRIL
Sbjct: 718 LVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGAAIDRIL 777
Query: 778 AEIVHSKKMKTAIDYVLCIGHFLGK 802
EIVHSK M T IDYVLCIGHFLGK
Sbjct: 778 GEIVHSKSMTTPIDYVLCIGHFLGK 802
|
Length = 934 |
| >gnl|CDD|215555 PLN03063, PLN03063, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 1305 bits (3378), Expect = 0.0
Identities = 524/710 (73%), Positives = 613/710 (86%), Gaps = 7/710 (0%)
Query: 93 RQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQ 152
R RLLVVANRLPVSA R GEDSWSLE+S GGLVSALLGVKEFE +WIGW GV+V DEIG+
Sbjct: 10 RPRLLVVANRLPVSAKRTGEDSWSLEMSPGGLVSALLGVKEFETKWIGWPGVDVHDEIGK 69
Query: 153 KALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFA 212
ALT++LAEK CIPVFL+ ++ QYYNGYCNNILWP+FHY+GLPQEDR TR+F+SQ+
Sbjct: 70 AALTESLAEKGCIPVFLN-EVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYD 128
Query: 213 AYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIH 272
AY KAN+MF DVV ++Y++GDVVWCHDYHLMFLP+ LKEYN+ MKVGWFLHTPFPSSEI+
Sbjct: 129 AYKKANRMFLDVVKENYEEGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSSEIY 188
Query: 273 RTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFP 332
+TLPSRS+LLRAVL ADL+GFHTYD+ARHF+SACTRILG EGT EGV DQG++TRVA FP
Sbjct: 189 KTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFP 248
Query: 333 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN 392
IGID ERFI E+ V+ H+KEL+ FAGRKV+LGVDRLDMIKGIPQK LAFEKFLEEN
Sbjct: 249 IGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEEN 308
Query: 393 SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPA 452
+WR KV+L+QIAVPTR DVPEYQ+L SQVHE+VGRINGRFG++++VPIHHLD S+DF
Sbjct: 309 PEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNY 368
Query: 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW 512
LCALYA+TDV LVTSLRDGMNLVSYEFVACQ KKGVL+LSEFAGA QSLGAGA+LVNPW
Sbjct: 369 LCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSLGAGALLVNPW 428
Query: 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQ 572
NITEV++AI ALNMS EERE RH HNF +V TH+AQ+WA+ F+SELND +VEA+LR +
Sbjct: 429 NITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEAELRTRN 488
Query: 573 VPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLN 632
+P L E D I++Y +SNNRLLILGF TLTEP R QI+EM+L LHP+LK+ L
Sbjct: 489 IPLELPEQDVIQQYSKSNNRLLILGFYGTLTEP------RNSQIKEMDLGLHPELKETLK 542
Query: 633 ALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWV 692
ALC DPKTT+VVLS S +++LDKNF EYN+WLAAENGMFLR T+G+W+TTMPEH+N++WV
Sbjct: 543 ALCSDPKTTVVVLSRSGKDILDKNFGEYNIWLAAENGMFLRHTSGEWVTTMPEHMNLDWV 602
Query: 693 DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVE 752
D +K+VF+YFT+RTPRS+ E+ ETSLVWNY+YADVEFGR QARDMLQHLW GPISNASV+
Sbjct: 603 DGVKNVFKYFTDRTPRSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVD 662
Query: 753 VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGK 802
VV+G KSVEV A+GVTKGAAI RIL EIVH+K M T ID+V C G+FL K
Sbjct: 663 VVRGQKSVEVHAIGVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEK 712
|
Length = 797 |
| >gnl|CDD|233848 TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 721 bits (1863), Expect = 0.0
Identities = 257/469 (54%), Positives = 315/469 (67%), Gaps = 15/469 (3%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKE-FEARWIGWAGVNVPDEIGQK 153
RL+VV+NRLPV R G LE SAGGL ALLG + W GW+G V ++ G+
Sbjct: 1 RLIVVSNRLPVPITRGG-----LEPSAGGLAVALLGALKATGGVWFGWSGKTVEEDEGEP 55
Query: 154 ALTKALAEK-RCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFA 212
L L K PVFL E+ V YYNG+ N+ LWPLFHY P R +
Sbjct: 56 FLRTELEGKITLAPVFLSEEDVDGYYNGFSNSTLWPLFHYR--PDLIRYDRK-----AWE 108
Query: 213 AYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIH 272
AY + N++FA+ + + GD+VW HDYHLM LP L+E K+G+FLH PFPSSEI+
Sbjct: 109 AYRRVNRLFAEALAPLLQPGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPSSEIY 168
Query: 273 RTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFP 332
RTLP R +LL +LA DLVGF TYD AR+F+SA +R LG E P GVE GR RV AFP
Sbjct: 169 RTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFP 228
Query: 333 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN 392
IGID +RF + VQ I EL+E+ GRK+++GVDRLD KG+P++LLAFE+FLEE+
Sbjct: 229 IGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEH 288
Query: 393 SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPA 452
+WRGKVVL+QIAVP+R DVPEYQ+L QV E+VGRINGRFGTL PI +L+RS D
Sbjct: 289 PEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREE 348
Query: 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW 512
L ALY DV LVT LRDGMNLV+ E+VA QD K GVLILSEFAGAAQ L GA+LVNP+
Sbjct: 349 LMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN-GALLVNPY 407
Query: 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561
+I +A+AIARAL M EERE+RH + + Q W E F+S+LN
Sbjct: 408 DIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLNS 456
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. Length = 456 |
| >gnl|CDD|216227 pfam00982, Glyco_transf_20, Glycosyltransferase family 20 | Back alignment and domain information |
|---|
Score = 714 bits (1845), Expect = 0.0
Identities = 280/474 (59%), Positives = 350/474 (73%), Gaps = 10/474 (2%)
Query: 94 QRLLVVANRLPVSAIRR--GEDSWSLEISAGGLVSALLGVKE-FEARWIGWAGVNVPDEI 150
RL+VV+NRLPV+A R G+ +S+++S+GGLVSAL G+ E E W+GW GV V ++
Sbjct: 1 SRLVVVSNRLPVTAKREEEGKWEFSIKMSSGGLVSALNGLSEATEGVWVGWPGVPVDEDE 60
Query: 151 GQKALTKALAEKR-CIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQS 209
+ +++ L EK C+PVFLD++ V +YYNG+ N+ILWPLFHY P + +S
Sbjct: 61 PKDRVSQLLKEKFTCVPVFLDDEDVDEYYNGFSNSILWPLFHYRLPPNNE----DEFDRS 116
Query: 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS 269
+ AY+K N++FAD + + YKDGD++W HDYHLM LP+ L++ D K+G+FLH PFPSS
Sbjct: 117 WWDAYVKVNKLFADKIVEVYKDGDLIWVHDYHLMLLPQMLRKRLPDAKIGFFLHIPFPSS 176
Query: 270 EIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEG-VEDQGRLTRV 328
EI R LP R ++LR +L ADL+GFHTYDYARHF+S C+R+LG E T +G VE GR V
Sbjct: 177 EIFRCLPVREEILRGLLGADLIGFHTYDYARHFLSCCSRLLGLETTSDGGVEYGGRTVSV 236
Query: 329 AAFPIGIDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDMIKGIPQKLLAFEK 387
AFPIGID R L+ VQ +KEL+E F +K++LGVDRLD IKGIPQKLLAFE+
Sbjct: 237 GAFPIGIDPGRIESGLKSPSVQEKVKELKERFGNKKKLILGVDRLDYIKGIPQKLLAFER 296
Query: 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS 447
FLEE +WRGKVVL+QIAVP+R DV EYQ L SQV E+VGRING FGTL P+HHL RS
Sbjct: 297 FLEEYPEWRGKVVLVQIAVPSRGDVEEYQNLRSQVEELVGRINGEFGTLDYTPVHHLHRS 356
Query: 448 LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAI 507
LDF L ALYA+ DV LVTSLRDGMNLV+YE+VACQ +KGVLILSEFAGAAQSL GAI
Sbjct: 357 LDFDELIALYAIADVCLVTSLRDGMNLVAYEYVACQQDRKGVLILSEFAGAAQSLNDGAI 416
Query: 508 LVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561
LVNPW+I EVA AI AL MS EER+KRH F +++ H Q WAE+F+S+L
Sbjct: 417 LVNPWDIEEVAEAINEALTMSEEERQKRHRKLFKYISKHDVQYWAESFLSDLKR 470
|
Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. Length = 470 |
| >gnl|CDD|184712 PRK14501, PRK14501, putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Score = 721 bits (1864), Expect = 0.0
Identities = 295/710 (41%), Positives = 421/710 (59%), Gaps = 40/710 (5%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNV---PDEI 150
RL++V+NRLPV+ + R + L S GGL + L + W+GW G+++ +E
Sbjct: 2 RLIIVSNRLPVT-VVREDGGVELTPSVGGLATGLRSFHERGGGLWVGWPGLDLEEESEEQ 60
Query: 151 GQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLG--LPQEDRLATTRSFQ 208
+ + L E +PVFL + V +YY G+CN+ LWPLFHY EDR
Sbjct: 61 RAR-IEPRLEELGLVPVFLSAEEVDRYYEGFCNSTLWPLFHYFPEYTEFEDRF------- 112
Query: 209 SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPS 268
+ +Y + NQ FA+ + + GDVVW HDY LM LP L+E D ++G+FLH PFPS
Sbjct: 113 --WESYERVNQRFAEAIAAIARPGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPS 170
Query: 269 SEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRV 328
E+ R LP R ++L +L ADL+GFHTYDY RHF+S+ R+LG+E + GR+ RV
Sbjct: 171 FEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRV 230
Query: 329 AAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388
AFP+GID ++F + + VQ I+ L++ GRK++L +DRLD KGIP++LLAFE+F
Sbjct: 231 DAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERF 290
Query: 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448
LE+N +WRGKV L+Q+AVP+RT VP+YQ + ++ E+VGRING FGT+ PIH+ RSL
Sbjct: 291 LEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSL 350
Query: 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAIL 508
F L ALY DVALVT LRDGMNLV+ E+VA + GVLILSE AGAA L A A+L
Sbjct: 351 PFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAEL-AEALL 409
Query: 509 VNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQL 568
VNP +I +A AI RAL M EE+ +R + + +WA F+ EL + + +
Sbjct: 410 VNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEKNKA 469
Query: 569 RIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMEL-KLHPDL 627
+ + I RY ++ RLL+L ++ TL P EL +L
Sbjct: 470 FASKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDP----------ELAVPDKEL 519
Query: 628 KQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHL 687
+ L L DP T + ++SG DR+ L++ F + + L AE+G + R G+W + E +
Sbjct: 520 RDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQ--LLEPV 577
Query: 688 NMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPIS 747
EW D+++ + E F +RTP S E++E SL W+Y+ AD E G +A +++ L + +S
Sbjct: 578 ATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANELILAL-SSLLS 636
Query: 748 NASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797
NA +EV++G+K VEVR GV KG A+ R+L D+VL IG
Sbjct: 637 NAPLEVLRGNKVVEVRPAGVNKGRAVRRLLE--------AGPYDFVLAIG 678
|
Length = 726 |
| >gnl|CDD|99963 cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Score = 660 bits (1706), Expect = 0.0
Identities = 246/468 (52%), Positives = 314/468 (67%), Gaps = 10/468 (2%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQK 153
RL+VV+NRLPVS R G+ + SAGGL +AL G+ K W+GW+G+ +E +
Sbjct: 1 RLVVVSNRLPVSIERDGDGEFEARRSAGGLATALKGLLKRTGGLWVGWSGIEEDEEEEDE 60
Query: 154 ALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAA 213
T+ L E PVFL + YYNG+ N +LWPLFHY RL R + + A
Sbjct: 61 VSTELLGEYTVAPVFLSPEEFEGYYNGFSNEVLWPLFHY-------RLDLARFDREDWEA 113
Query: 214 YIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR 273
Y++ N+ FAD + + + GD+VW HDYHL+ LP+ L+E D ++G+FLH PFPSSEI R
Sbjct: 114 YVRVNRKFADAIAEVLRPGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSSEIFR 173
Query: 274 TLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVED-QGRLTRVAAFP 332
LP R +LLR +L ADL+GF T YAR+F+S C+R+LG E T +G + GR RV AFP
Sbjct: 174 CLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFP 233
Query: 333 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN 392
IGID + F + VQ EL+E GRK+++GVDRLD KGIP++LLAFE+ LE
Sbjct: 234 IGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERY 293
Query: 393 SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPA 452
+WRGKVVL+QIAVP+RTDVPEYQ L +V E+VGRING+FGTL P+ +L RSL
Sbjct: 294 PEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREE 353
Query: 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW 512
L ALY DVALVT LRDGMNLV+ E+VACQD GVLILSEFAGAA+ L GA+LVNP+
Sbjct: 354 LAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEELS-GALLVNPY 412
Query: 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 560
+I EVA+AI RAL M EER +RH +V TH Q WA +F+ +L
Sbjct: 413 DIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDLA 460
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. Length = 460 |
| >gnl|CDD|223457 COG0380, OtsA, Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 546 bits (1409), Expect = 0.0
Identities = 233/473 (49%), Positives = 302/473 (63%), Gaps = 15/473 (3%)
Query: 93 RQRLLVVANRLPVSAIRRGEDSWSLEI-SAGGLVSALLGVKE-FEARWIGWAGVNVPDEI 150
RL+VV+NRLPV G+ SAGGLV+AL + WIGW+G P +
Sbjct: 14 DSRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKPLLRVDGGTWIGWSGTTGPTDE 73
Query: 151 GQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHY-LGLPQEDRLATTRSFQS 209
L + + E PV L ++ YYNG+ N ILWPLFHY + +R +
Sbjct: 74 SSDDLKERIGEFTSAPVILSDEDYEGYYNGFSNAILWPLFHYFIDDVAYER--------N 125
Query: 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS 269
+ AY+K N+ FAD + + Y+ GD++W HDYHL+ +P+ L+E D K+G+FLH PFPSS
Sbjct: 126 WWDAYVKVNRKFADKIVEIYEPGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSS 185
Query: 270 EIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVED--QGRLTR 327
E+ R LP R ++L +L ADL+GF T YAR+F+ C+R+LG G + + GR+ +
Sbjct: 186 EVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNGADGRIVK 245
Query: 328 VAAFPIGIDSERFIRALEINPVQVHIKEL-QETFAGRKVMLGVDRLDMIKGIPQKLLAFE 386
V AFPIGID E F RAL+ VQ + EL E +K+++GVDRLD KGIPQ+LLAFE
Sbjct: 246 VGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFE 305
Query: 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR 446
+ LEE +WRGKVVLLQIA P+R DV EYQ L Q+ E+VGRING FG+L+ P+H+L R
Sbjct: 306 RLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHR 365
Query: 447 SLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGA 506
LD L ALY DV LVT LRDGMNLV+ E+VA Q K GVLILSEFAGAA L A
Sbjct: 366 DLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASEL-RDA 424
Query: 507 ILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559
++VNPW+ EVA+AI RAL MS EER++RH V TH WA +F+ +L
Sbjct: 425 LIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDL 477
|
Length = 486 |
| >gnl|CDD|177855 PLN02205, PLN02205, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 455 bits (1171), Expect = e-147
Identities = 272/765 (35%), Positives = 411/765 (53%), Gaps = 75/765 (9%)
Query: 83 CERLDGRTFSRQRLLVVANRLPVSAIRR--GEDSWSLEISAGGLVSAL---LGVKEFEAR 137
C + + R+++VAN+LP+ A R+ G W L+ L LG E E
Sbjct: 49 CSDPSSSSVPKDRIIIVANQLPIRAQRKSDGSKGWIFSWDENSLLLQLKDGLGDDEIEVI 108
Query: 138 WIGWAGVNV-PDEIGQKALTKALAEK-RCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGL 195
++G + +E Q+ +++ L E +C+P FL D+ +YY+G+C LWPLFHY+ L
Sbjct: 109 YVGCLKEEIHLNE--QEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYM-L 165
Query: 196 PQEDRLATTRSFQSQFAAYIKANQMFAD----VVNKHYKDGDVVWCHDYHLMFLPKCLKE 251
P L R +S + AY+ N++FAD V+N + D VW HDYHLM LP L++
Sbjct: 166 PLSPDLGG-RFNRSLWQAYVSVNKIFADRIMEVINP---EDDFVWIHDYHLMVLPTFLRK 221
Query: 252 YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILG 311
+ +K+G+FLH+PFPSSEI++TLP R +LLRA+L +DL+GFHT+DYARHF+S C+R+LG
Sbjct: 222 RFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLG 281
Query: 312 FEGTPE----GVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA--GRKV 365
+ G+E GR + P+GI + L + + +KEL + F R +
Sbjct: 282 LSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIM 341
Query: 366 MLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEI 425
+LGVD +D+ KGI KLLA E+ L ++ +W+GKVVL+QIA P R + + + ++ H
Sbjct: 342 LLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHST 401
Query: 426 VGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD- 484
V RIN FG PI +D L F A Y V + LVT++RDGMNL+ YE++ +
Sbjct: 402 VKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQG 461
Query: 485 --------------LKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPE 530
KK +L++SEF G + SL +GAI VNPWNI VA+A+ AL M+
Sbjct: 462 NEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIDAVADAMDSALEMAEP 520
Query: 531 EREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE------------AQLRIKQVPPSLR 578
E++ RH ++ +V+TH WA +F+ +L T + R+ + P+ R
Sbjct: 521 EKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFR 580
Query: 579 EADSIER----YLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 634
+ S+E Y R+ R ++L ++ TL + ++ LN L
Sbjct: 581 KL-SMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDI-----------LNTL 628
Query: 635 CHDPKTTIVVLSGSDRNVLDKNFQE-YNLWLAAENGMFLRCT-TGKWMTTMPEHLNMEWV 692
C D + ++S R L F L +AAE+G FLR +W T +P + W
Sbjct: 629 CRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPV-ADCSWK 687
Query: 693 DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVE 752
+ V + +TE T S E +ET+LVW Y+ AD +FG QA+++L HL ++N V
Sbjct: 688 QIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHL-ESVLANEPVT 746
Query: 753 VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797
V G VEV+ GV+KG R+L+ + ++ D+VLCIG
Sbjct: 747 VKSGQNIVEVKPQGVSKGLVAKRLLSIM---QERGMLPDFVLCIG 788
|
Length = 854 |
| >gnl|CDD|182249 PRK10117, PRK10117, trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Score = 282 bits (724), Expect = 2e-86
Identities = 175/496 (35%), Positives = 253/496 (51%), Gaps = 45/496 (9%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLG-VKEFEARWIGWAGVNVPDEIG-- 151
RL+VV+NR+ A + SAGGL +LG +K W GW+G E G
Sbjct: 3 RLVVVSNRI---APPDEHKA-----SAGGLAVGILGALKAAGGLWFGWSG-----ETGNE 49
Query: 152 QKALTKALAEKRCIPVF-LDEDIVHQYYNGYCNNILWPLFHY-LGLPQEDRLATTRSFQS 209
+ L K F L E +YYN + N +LWP FHY L L Q R A
Sbjct: 50 DQPLKKVKKGNITWASFNLSEQDYDEYYNQFSNAVLWPAFHYRLDLVQFQRPA------- 102
Query: 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS 269
+ Y++ N + AD + KD D++W HDYHL+ L++ + ++G+FLH PFP+
Sbjct: 103 -WEGYLRVNALLADKLLPLLKDDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFPTP 161
Query: 270 EIHRTLPSRSDLLRAVLAADLVGFHTYDYARHF---VSACTRILGFEGTPEGVEDQGRLT 326
EI LP +LL + DL+GF T + F +S TR+ G + T
Sbjct: 162 EIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRT 221
Query: 327 RVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFE 386
V +PIGI+ + I P+ + +L+ + + V+RLD KG+P++ LA+E
Sbjct: 222 EV--YPIGIEPDE-IAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYE 278
Query: 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR 446
LE+ GK+ QIA +R DV YQ + Q+ GRING++G L P+++L++
Sbjct: 279 ALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQ 338
Query: 447 SLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKK-GVLILSEFAGAAQSLGAG 505
D L ++ +DV LVT LRDGMNLV+ E+VA QD GVL+LS+FAGAA L +
Sbjct: 339 HFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTS- 397
Query: 506 AILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 565
A++VNP++ EVA A+ RAL M ER RH + + W E F+S+L
Sbjct: 398 ALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDL------ 451
Query: 566 AQLRIKQVPPSLREAD 581
KQ+ P E+
Sbjct: 452 -----KQIVPRSAESQ 462
|
Length = 474 |
| >gnl|CDD|131451 TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Score = 272 bits (697), Expect = 2e-82
Identities = 148/502 (29%), Positives = 236/502 (47%), Gaps = 53/502 (10%)
Query: 99 VANRLPVSAIR--RGEDSWSLEISAGGLVSALLGVKEFEAR----WIGWAGVNVPDEIGQ 152
+ +RLP R G+ S G++ LL F W+ WA +
Sbjct: 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSF--FGDGRAGTWVAWAEHDENSGETF 58
Query: 153 KALTKALAEKRCIP--VFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQ 210
+ AE + + L ++ V +Y+ WP+ H +F +
Sbjct: 59 DSHMTVPAEYKLTAARIPLSKEQVDIFYHITSKEAFWPILH--------------TFPER 104
Query: 211 F-------AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLH 263
F ++K N+ FA+ +G VW HDY+L +P +++ D+K+ +F H
Sbjct: 105 FQFREDDWQVFLKVNRAFAEAACLEAAEGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHH 164
Query: 264 TPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQ- 322
TPFPS+++ LP R ++ ++L D +GFH Y +FV A ++ + D
Sbjct: 165 TPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPR 224
Query: 323 --------------------GRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG 362
R+ ++ A P+G D ER AL ++ ++ ++ AG
Sbjct: 225 FITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAG 284
Query: 363 RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQV 422
K++L +R+D KGI +KL A+E+ LE + GKV L+ VP + + Y L Q+
Sbjct: 285 VKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQI 344
Query: 423 HEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482
+ VGRINGRF + P+ RSL + + A +A+ DV +T LRDG+NLV+ E+VA
Sbjct: 345 EQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAA 404
Query: 483 QDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542
Q L GVL+LSEFAGAA L GA+L NP++ + I AL M E++ R F
Sbjct: 405 QGLLDGVLVLSEFAGAAVEL-KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDA 463
Query: 543 VTTHTAQEWAETFVSELNDTVV 564
V + Q WA+ F++ ++
Sbjct: 464 VNYYDVQRWADEFLAAVSPQAQ 485
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. Length = 487 |
| >gnl|CDD|216992 pfam02358, Trehalose_PPase, Trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 226 bits (577), Expect = 2e-68
Identities = 72/206 (34%), Positives = 108/206 (52%), Gaps = 12/206 (5%)
Query: 595 ILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD 654
L ++ TL+ V+ P L LN L DP T+ ++SG R D
Sbjct: 1 FLDYDGTLSPIVEDP---------DAAVPSDRLLSLLNRLASDPPNTVAIISGRSRAFED 51
Query: 655 KNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQR 714
F NL LAAE+G F+R G+ T + E +++W + + E +TERTP S+ E +
Sbjct: 52 LFFGVPNLGLAAEHGAFIRDPGGEDWTNLAEVEDLDWKKEVAAILEEYTERTPGSYIEDK 111
Query: 715 ETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAID 774
+++L W+Y+ AD +FG QA+++ +HL + V V QG K VEVR VGV+KG A +
Sbjct: 112 KSALAWHYRNADDDFGVFQAKELAEHLESVLKDYPDVRVTQGKKVVEVRPVGVSKGKAAE 171
Query: 775 RILAEIVHSKKMKTAIDYVLCIGHFL 800
R+L E+ + D+ LCIG
Sbjct: 172 RLLEELGSAGSP---PDFPLCIGDDR 194
|
This family consist of trehalose-phosphatases EC:3.1.3.12 these enzyme catalyze the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. The aligned region is present in trehalose-phosphatases and comprises the entire length of the protein it is also found in the C-terminus of trehalose-6-phosphate synthase EC:2.4.1.15 adjacent to the trehalose-6-phosphate synthase domain - pfam00982. It would appear that the two equivalent genes in the E. coli otsBA operon otsA the trehalose-6-phosphate synthase and otsB trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. Length = 235 |
| >gnl|CDD|224789 COG1877, OtsB, Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 105 bits (265), Expect = 2e-25
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 19/224 (8%)
Query: 574 PPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNA 633
P+L+ +E YL + RLL L ++ TLTE V P E + L L
Sbjct: 1 TPALQSNQLLEPYLNARKRLLFLDYDGTLTEIVPHP--------EAAV-PDDRLLSLLQD 51
Query: 634 LCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVD 693
L DP+ + ++SG L++ F + L AE+G +R GKW + E ++ W+
Sbjct: 52 LASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLK 111
Query: 694 SLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEV 753
+ + EY+ ERTP S+ E++ ++ +Y+ A+ + G A L I+ + V
Sbjct: 112 EVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATL----INELKLRV 167
Query: 754 VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797
G VE+R GV+KGAAI I+ E+ + + G
Sbjct: 168 TPGKMVVELRPPGVSKGAAIKYIMDELPFDG------RFPIFAG 205
|
Length = 266 |
| >gnl|CDD|233092 TIGR00685, T6PP, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 66.0 bits (161), Expect = 7e-12
Identities = 43/196 (21%), Positives = 73/196 (37%), Gaps = 15/196 (7%)
Query: 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 648
+ R ++ TL+E V P + L L L P I ++SG
Sbjct: 1 ARKRAFFFDYDGTLSEIVPDPD---------AAVVSDRLLTILQKLAARPHNAIWIISGR 51
Query: 649 DRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPR 708
+ L LA E+G ++ W + E T R P
Sbjct: 52 KFLEKWLGVKLPGLGLAGEHGCEMKDNGSCQDWVNLTEKIPSWKVRANELREEITTR-PG 110
Query: 709 SHFEQRETSLVWNYKYADV-EFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGV 767
E++ +L W+Y+ A V E R +A+++ + + + +EV+ G VE++ V
Sbjct: 111 VFIERKGVALAWHYRQAPVPELARFRAKELKEKILS----FTDLEVMDGKAVVELKPRFV 166
Query: 768 TKGAAIDRILAEIVHS 783
KG + R+L S
Sbjct: 167 NKGEIVKRLLWHQPGS 182
|
Trehalose, a neutral disaccharide of two glucose residues, is an important osmolyte for dessication and/or salt tolerance in a number of prokaryotic and eukaryotic species, including E. coli, Saccharomyces cerevisiae, and Arabidopsis thaliana. Many bacteria also utilize trehalose in the synthesis of trehalolipids, specialized cell wall constituents believed to be involved in the uptake of hydrophobic substances. Trehalose dimycolate (TDM, cord factor) and related substances are important constituents of the mycobacterial waxy coat and responsible for various clinically important immunological interactions with host organism. This enzyme, trehalose-phosphatase, removes a phosphate group in the final step of trehalose biosynthesis. The trehalose-phosphatase from Saccharomyces cerevisiae is fused to the synthase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes [Cellular processes, Adaptations to atypical conditions]. Length = 244 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 3e-06
Identities = 73/305 (23%), Positives = 113/305 (37%), Gaps = 47/305 (15%)
Query: 233 DVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVG 292
DVV HD+ + + + +H E R LL+ A +
Sbjct: 87 DVVHAHDWLALLAAALAA-RLLGIPLVLTVH----GLEFGRPGNELGLLLKLARALERRA 141
Query: 293 FHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVH 352
D + A + E G ++T + P G+D+ERF A ++
Sbjct: 142 LRRADR----IIAVSEATREELRELGGVPPEKITVI---PNGVDTERFRPAPRAARRRLG 194
Query: 353 IKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDV 412
I E V+L V RL KG+ L A K +E D R +V D
Sbjct: 195 IPE------DEPVILFVGRLVPRKGVDLLLEALAKLRKEYPDVRLVIV---------GDG 239
Query: 413 PEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGM 472
P + L + E+ + R + L ALYA DV ++ SL +G
Sbjct: 240 PLREELEALAAEL--GLGDRV---------TFLGFVPDEDLPALYAAADVFVLPSLYEGF 288
Query: 473 NLVSYEFVACQDLKKGV-LILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSP 529
LV E +A G+ ++ S+ G + + G +LV P + +A AI R L+ P
Sbjct: 289 GLVLLEAMAA-----GLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLD-DP 342
Query: 530 EEREK 534
E R +
Sbjct: 343 ELRRR 347
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 47.6 bits (112), Expect = 2e-05
Identities = 67/313 (21%), Positives = 110/313 (35%), Gaps = 48/313 (15%)
Query: 227 KHYKDGDVVWCHDYHLMFLPK--CLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA 284
K D++ H L L + + LH P + L LLR
Sbjct: 79 KRLLPYDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRL 138
Query: 285 VLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRAL 344
+L VS + L +E G ++ P GID+E+F
Sbjct: 139 LLKRLKKALRLLADRVIAVSPALKEL--------LEALGVPNKIVVIPNGIDTEKFA--- 187
Query: 345 EINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQI 404
P ++ + G+ V+L V RLD KG+ + A K + D + L I
Sbjct: 188 ---PARIGLLP----EGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIK-----LVI 235
Query: 405 AVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464
E ++L + + + + L L A DV +
Sbjct: 236 VGDGPERREELEKLAKK-LGLEDNV-------------KFLGYVPDEELAELLASADVFV 281
Query: 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVANAI 521
+ SL +G LV E +A G +++ G + G +LV P ++ E+A+A+
Sbjct: 282 LPSLSEGFGLVLLEAMAA-----GTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADAL 336
Query: 522 ARALNMSPEEREK 534
+ L PE RE+
Sbjct: 337 EQLLED-PELREE 348
|
Length = 381 |
| >gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 8e-04
Identities = 48/207 (23%), Positives = 81/207 (39%), Gaps = 37/207 (17%)
Query: 332 PIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFEKF 388
GID++RF + +P + +++ V+L V RL K P L AF K
Sbjct: 160 YNGIDTDRFRK----DPAR--RLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKL 213
Query: 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRF-GTLTAVPIHHLDRS 447
L + D + L IA D P L + + + G +
Sbjct: 214 LSDYLDIK-----LLIA----GDGPLRATLERLIKALGLSNRVKLLGLRDDIA------- 257
Query: 448 LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAI 507
A Y D+ +++S +G LV E +AC+ ++ ++ G + +G +
Sbjct: 258 -------AYYNAADLFVLSSAWEGFGLVVAEAMACELP----VVATDAGGVREVVGDSGL 306
Query: 508 LVNPWNITEVANAIARALNMSPEEREK 534
+V + +AN I L MS EER+
Sbjct: 307 IVPISDPEALANKIDEILKMSGEERDI 333
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360 |
| >gnl|CDD|99966 cd03792, GT1_Trehalose_phosphorylase, Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 0.001
Identities = 78/365 (21%), Positives = 110/365 (30%), Gaps = 79/365 (21%)
Query: 212 AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI 271
Y++ N+ A+ D DVV HD + LP K W H ++
Sbjct: 67 EIYLEWNEENAERPLLDL-DADVVVIHDPQPLALPLFKK--KRGRPWIWRCHI-----DL 118
Query: 272 HRTLPSRSDLLR-AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAA 330
D L+ + D FH +Y V R
Sbjct: 119 SSPNRRVWDFLQPYIEDYDAAVFHLPEYVPPQVP---------------------PRKVI 157
Query: 331 FPIGID---------SERFIRA-LEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQ 380
P ID S I LE K + R + V R D K
Sbjct: 158 IPPSIDPLSGKNRELSPADIEYILE--------KYGIDPE--RPYITQVSRFDPWKDPFG 207
Query: 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440
+ A+ K E D L + TD PE + +V E + LT P
Sbjct: 208 VIDAYRKVKERVPD-----PQLVLVGSGATDDPEGWIVYEEVLEYAE-GDPDIHVLTLPP 261
Query: 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV-LILSEFAGAA 499
+ L+ + AL + V L S+R+G L E L KG +I G
Sbjct: 262 VSDLE-------VNALQRASTVVLQKSIREGFGLTVTE-----ALWKGKPVIAGPVGGIP 309
Query: 500 QSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-----TTHTAQEWA 552
+ G LV+ + E A I L PE R K + HV T +++
Sbjct: 310 LQIEDGETGFLVDT--VEEAAVRILYLLR-DPELRRKMGANAREHVRENFLITRHLKDYL 366
Query: 553 ETFVS 557
Sbjct: 367 YLISK 371
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. Length = 372 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 844 | |||
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 100.0 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 100.0 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 100.0 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 100.0 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 100.0 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 100.0 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 100.0 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 100.0 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 100.0 | |
| PLN02580 | 384 | trehalose-phosphatase | 100.0 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 100.0 | |
| PLN02151 | 354 | trehalose-phosphatase | 100.0 | |
| PLN03017 | 366 | trehalose-phosphatase | 100.0 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 100.0 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 100.0 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 99.94 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 99.94 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 99.94 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 99.94 | |
| PLN02316 | 1036 | synthase/transferase | 99.94 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 99.94 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.93 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 99.93 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 99.93 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 99.93 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.93 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.92 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.92 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.92 | |
| PLN00142 | 815 | sucrose synthase | 99.91 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.91 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 99.91 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 99.9 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.9 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.9 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.9 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.9 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.9 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.9 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.89 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 99.89 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.89 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.89 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.89 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.89 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.88 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.88 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.88 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.88 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.87 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.87 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.87 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.87 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.87 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 99.86 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.86 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.86 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.86 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.86 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.86 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.86 | |
| PLN02887 | 580 | hydrolase family protein | 99.86 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.86 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.85 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.85 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.85 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 99.85 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.85 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.85 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.84 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.84 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.84 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.84 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.84 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.84 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.84 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.84 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.83 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.83 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.83 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.82 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.82 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.82 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.82 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.81 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.81 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 99.81 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.81 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.81 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.81 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.8 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.79 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.79 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.78 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 99.78 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.77 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.77 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.77 | |
| PLN02423 | 245 | phosphomannomutase | 99.76 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.75 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.74 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 99.73 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 99.72 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.7 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.69 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 99.67 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.64 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.6 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.59 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.51 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.48 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.4 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.39 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.36 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.31 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.29 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.29 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.22 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.22 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.21 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.19 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.15 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 99.12 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.07 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.05 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.03 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.99 | |
| KOG3189 | 252 | consensus Phosphomannomutase [Lipid transport and | 98.94 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 98.94 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 98.88 | |
| PF03332 | 220 | PMM: Eukaryotic phosphomannomutase; InterPro: IPR0 | 98.8 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 98.51 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 98.47 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.35 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.32 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.3 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 98.27 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.21 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.16 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.03 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 97.98 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 97.96 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 97.78 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 97.43 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 97.4 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 97.18 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.92 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 96.76 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 96.73 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 96.7 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 96.65 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 96.64 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.58 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.45 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 96.42 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 96.36 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 96.14 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 96.03 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 96.01 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 95.91 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 95.9 | |
| PF06437 | 408 | ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0 | 95.63 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 95.61 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 95.54 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 95.44 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 95.42 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 95.26 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 95.21 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 95.17 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 95.07 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 94.94 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 94.9 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 94.77 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 94.71 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 94.57 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 94.48 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 94.45 | |
| PLN02954 | 224 | phosphoserine phosphatase | 94.43 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 94.33 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 94.28 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 94.27 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 94.19 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 94.19 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 94.17 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 94.08 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 93.62 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 93.48 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 93.43 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 93.25 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 93.19 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 93.15 | |
| PRK06769 | 173 | hypothetical protein; Validated | 93.03 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 92.84 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 92.8 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 92.66 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 92.63 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 92.62 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 92.5 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 92.46 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 92.08 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 91.98 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 91.95 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 91.95 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 91.93 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 91.78 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 91.47 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 91.29 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 91.12 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 90.52 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 90.47 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 90.46 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 90.09 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 89.99 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 89.88 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 89.7 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 89.65 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 89.52 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 89.28 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 89.21 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 89.06 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 89.04 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 89.03 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 88.57 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 88.42 | |
| PRK08238 | 479 | hypothetical protein; Validated | 87.89 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 87.85 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 87.81 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 87.8 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 87.7 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 87.66 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 87.5 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 86.92 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 86.71 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 86.28 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 85.65 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 84.83 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 84.46 | |
| PLN02940 | 382 | riboflavin kinase | 84.46 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 83.95 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 83.82 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 83.47 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 83.07 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 82.81 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 82.21 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 81.15 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 81.11 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 81.05 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 80.86 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 80.44 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 80.31 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 80.06 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 80.02 |
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-169 Score=1507.59 Aligned_cols=803 Identities=86% Similarity=1.333 Sum_probs=739.9
Q ss_pred CCCCCCCCCCCCCChhhHHHHhhhhhHHHhhhhhccCCCCCCCC-CCCCcccccchhccccCCCCCCcccccCCCCCC--
Q 003145 1 MPGNSYNSNSSNIPPDRVTRLVREKIERDLRKSSRASHPNDVTD-NGGREVFEDEQRLRDGDNLGPSIVDEDLEGPAS-- 77 (844)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 77 (844)
||||+|+|+++..+.+|++||+|+ ||||+.+++++..++.+ +.+.++.++++..+|..+.++..+++..+|.+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (934)
T PLN03064 1 MPGNKYNGQSSVNPTSRVERLLRE---RELRKSERSSNANDDLDTNAGSEAFENDLRLSEGDNDSSSHVEQLLEGAAAES 77 (934)
T ss_pred CCCcccCCCCCCCCCchHHHHHHH---HHHHhhhcccccccccccchhhhhhhhhccccccccccccchHHHhhhhhhhc
Confidence 899999999977888899999999 99999999998655555 777899999999999999999999999998733
Q ss_pred CCCCCcccCCCCCCCCCcEEEEEcCCCcceEecCCCcEEEEecCCcHHHhhcccccCCcEEEEeCCCCCCCchhhhHHHH
Q 003145 78 TPNEGCERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTK 157 (844)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~~~~~~~Wvg~~g~~~~~~~~~~~~~~ 157 (844)
...++|.+++++.+-++||||||||||+.++++++|.|++++++|||+++|.+++..+++||||+|..+++++++..++.
T Consensus 78 ~~~~~~~~~~~~~~~~~rlIiVSNRlPv~~~~~~~g~~~~~~s~GGLvsaL~~~~~~~~~WVGw~g~~~~~~~~~~~~~~ 157 (934)
T PLN03064 78 ALPDGCERQEGRRPLRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALTK 157 (934)
T ss_pred cCCcccccccCCCCCCCCEEEEECCCCcceeecCCCceEEeECCCCcHHHhcccccCCeEEEeeCCCCCCCcchhHHHHH
Confidence 35688888888776689999999999999988778999999999999999999977899999999988776655666777
Q ss_pred hccCceEEEEecChHhhhhhhhhhhhhccccccCCCCCCcccccccchhhHHHHHHHHHHHHHHHHHHHhhCCCCCEEEE
Q 003145 158 ALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWC 237 (844)
Q Consensus 158 ~~~~~~~~pV~l~~~~~~~~Y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~~~~~~Y~~vN~~fa~~i~~~~~~~DiVwv 237 (844)
.+.+|+|+||||+++++++||+||||++|||+|||++..+.++....+.++.+|++|++||++||++|++.+++||+|||
T Consensus 158 ~l~~~~~~pV~l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~gD~VWV 237 (934)
T PLN03064 158 ALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWC 237 (934)
T ss_pred HhccCceEEEeCCHHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 88899999999999999999999999999999999865443333222334467999999999999999999999999999
Q ss_pred eCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCC
Q 003145 238 HDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPE 317 (844)
Q Consensus 238 HDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~ 317 (844)
||||||+||++||++.|+++||||+|||||++|+||+||+|++||+|||+||+|||||++|++||+++|.+++|++....
T Consensus 238 HDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~ 317 (934)
T PLN03064 238 HDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE 317 (934)
T ss_pred ecchhhHHHHHHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred ceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCC
Q 003145 318 GVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRG 397 (844)
Q Consensus 318 ~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~ 397 (844)
+++++||.++|.++|+|||++.|.+.+..++++++++.++++++++++|++|||||+.|||+++|+||++||++||+|++
T Consensus 318 ~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~ 397 (934)
T PLN03064 318 GVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRD 397 (934)
T ss_pred eEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccC
Confidence 89999999999999999999999999989999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHh
Q 003145 398 KVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSY 477 (844)
Q Consensus 398 ~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~ 477 (844)
+|+|+||+.|+|+++++|++|++++.++|++||++||+.+|.||+|+.+.+++++|.+||++|||||+||++||||||++
T Consensus 398 kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~ 477 (934)
T PLN03064 398 KVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSY 477 (934)
T ss_pred CEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 003145 478 EFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVS 557 (844)
Q Consensus 478 Eama~~~~~~g~lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~ 557 (844)
||||||.+++|+||+|||+|++++||.+|++|||||++++|+||.+||+|+++||++|+++++++|.+||+++|+++|+.
T Consensus 478 Eyva~~~~~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~ 557 (934)
T PLN03064 478 EFVACQDSKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVS 557 (934)
T ss_pred HHHHhhcCCCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHH
Confidence 99999999999999999999999997789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHhhhccccCCCCccHHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcC
Q 003145 558 ELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHD 637 (844)
Q Consensus 558 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d 637 (844)
+|+.+..+...+..+.++.|+.+.++++|++++++||||||||||++..+.|..+.+++.+....|+++++++|++|+++
T Consensus 558 ~L~~~~~~~~~~~~~~~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~d 637 (934)
T PLN03064 558 ELNDTVVEAQLRTRQVPPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSD 637 (934)
T ss_pred HHHHHHhhhhccccccCCCCCHHHHHHHHHhccceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhC
Confidence 99998766666666667899999999999999999999999999999988886555566556778999999999999999
Q ss_pred CCCcEEEEcCCChhhHHHhhcccCceEEeecceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccce
Q 003145 638 PKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETS 717 (844)
Q Consensus 638 ~g~~V~I~SGR~~~~l~~~~~~l~l~liaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~s 717 (844)
|+|.|+|+|||++..|++||+.++++++||||++++..++.|...+++..+.+|++.+..+|++|+++|||++||.|+++
T Consensus 638 p~n~VaIVSGR~~~~Le~~fg~~~L~LaAEHG~~~R~~~~~w~~~~~~~~~~~W~~~v~~ile~~~eRtPGS~IE~K~~S 717 (934)
T PLN03064 638 PKTTIVVLSGSDRSVLDENFGEFDMWLAAENGMFLRHTKGEWMTTMPEHLNMDWVDSVKHVFEYFTERTPRSHFETRETS 717 (934)
T ss_pred CCCeEEEEeCCCHHHHHHHhCCCCceEEeeCCeEEecCCCcceeccccccchHHHHHHHHHHHHHHhcCCCcEEEEcCcE
Confidence 99999999999999999999999999999999999987788985444556789999999999999999999999999999
Q ss_pred EEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEe
Q 003145 718 LVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797 (844)
Q Consensus 718 l~~hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiG 797 (844)
++||||++||+++..||+++.++|++..+.+.+++|+.|+++|||+|.++|||.|+++|++++..+.....++|||+|+|
T Consensus 718 LawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc~G 797 (934)
T PLN03064 718 LVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIG 797 (934)
T ss_pred EEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCHHHHHHHHHHhhhhccccCCCCCEEEEeC
Confidence 99999999999999999999999966666677899999999999999999999999999998743222224689999999
Q ss_pred eC--CCchhhc
Q 003145 798 HF--LGKVLLT 806 (844)
Q Consensus 798 D~--~~nDMf~ 806 (844)
|+ .|+|||+
T Consensus 798 Dd~~~DEdmF~ 808 (934)
T PLN03064 798 HFLGKDEDIYT 808 (934)
T ss_pred CCCCCcHHHHH
Confidence 92 2567997
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-153 Score=1382.90 Aligned_cols=727 Identities=36% Similarity=0.650 Sum_probs=658.9
Q ss_pred CCcEEEEEcCCCcceEecCC--CcEEEEecCCcHHHhhccc-c--cCCcEEEEeCCCCCCCchhhhHHHHhccCceEEEE
Q 003145 93 RQRLLVVANRLPVSAIRRGE--DSWSLEISAGGLVSALLGV-K--EFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPV 167 (844)
Q Consensus 93 ~~~livvsnrlP~~~~~~~~--~~~~~~~~~ggl~~~l~~~-~--~~~~~Wvg~~g~~~~~~~~~~~~~~~~~~~~~~pV 167 (844)
+.||||||||||+.++++++ +.|++++++|||+++|.++ + ..+++||||+|..++.+++++.....+.+|+|+||
T Consensus 59 ~~rliiVsnrlPv~~~~~~~g~~~~~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv 138 (854)
T PLN02205 59 KDRIIIVANQLPIRAQRKSDGSKGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVPT 138 (854)
T ss_pred CCcEEEEEccCceEEEEcCCCCcceEEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEEe
Confidence 57999999999999988643 6899999999999999977 3 47899999999877765544444566778999999
Q ss_pred ecChHhhhhhhhhhhhhccccccCCCC-CCcccccccchhhH-HHHHHHHHHHHHHHHHHHhhCCC-CCEEEEeCccchh
Q 003145 168 FLDEDIVHQYYNGYCNNILWPLFHYLG-LPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKD-GDVVWCHDYHLMF 244 (844)
Q Consensus 168 ~l~~~~~~~~Y~~f~n~~LWp~fH~~~-~~~~~~~~~~~~~~-~~~~~Y~~vN~~fa~~i~~~~~~-~DiVwvHDyhl~l 244 (844)
||+++++++||+||||++|||+|||+. ..+. ....|+ ..|++|++||++||++|++.+++ +|+|||||||||+
T Consensus 139 ~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~----~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~l 214 (854)
T PLN02205 139 FLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPD----LGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMV 214 (854)
T ss_pred eCCHHHHHHHHHhhhhccccchhccCCCCCcc----ccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhH
Confidence 999999999999999999999999983 3321 123577 56999999999999999999998 6999999999999
Q ss_pred HHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCC----Ccee
Q 003145 245 LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP----EGVE 320 (844)
Q Consensus 245 lp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~----~~v~ 320 (844)
||.+||+++|+++||||+|||||++|+||+||||++||+|||+||+|||||++|++||++||+|++|+++.. .+++
T Consensus 215 lP~~LR~~~~~~~IgfFlHiPFPs~eifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~ 294 (854)
T PLN02205 215 LPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLE 294 (854)
T ss_pred HHHHHHhhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999998754 3578
Q ss_pred eCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhC--CCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCc
Q 003145 321 DQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA--GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGK 398 (844)
Q Consensus 321 ~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~--~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~ 398 (844)
|+||.++|.++|+|||++.|...+..+++.+.+++++++++ ++++|++|||||+.|||.++|+||++||++||+|+++
T Consensus 295 ~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gk 374 (854)
T PLN02205 295 YYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGK 374 (854)
T ss_pred ECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCC
Confidence 99999999999999999999999999999999999999995 6999999999999999999999999999999999999
Q ss_pred eEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhh
Q 003145 399 VVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYE 478 (844)
Q Consensus 399 v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~E 478 (844)
|+||||+.|+|+++++|++++++++++|++||++||+.+|.||+|+++.++++|+.|||++|||+++||+|||||||++|
T Consensus 375 vvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~E 454 (854)
T PLN02205 375 VVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYE 454 (854)
T ss_pred EEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccC---------------CCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 003145 479 FVACQDL---------------KKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV 543 (844)
Q Consensus 479 ama~~~~---------------~~g~lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v 543 (844)
|+||+.+ ++|+||+|||+||+.+| .+|++|||||++++|+||.+||+||.+||+.|+++++++|
T Consensus 455 yia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L-~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v 533 (854)
T PLN02205 455 YIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYV 533 (854)
T ss_pred eeEEccCccccccccccccccCCCCceEeeeccchhHHh-CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 9999963 57999999999999999 7899999999999999999999999999999999999999
Q ss_pred HhcCHHHHHHHHHHHHHHhHHHhh-hcc--------------ccCCCCccHHHHHHHHHhcCCeEEEEecCCccCCCCCC
Q 003145 544 TTHTAQEWAETFVSELNDTVVEAQ-LRI--------------KQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDT 608 (844)
Q Consensus 544 ~~~~~~~W~~~fl~~l~~~~~~~~-~~~--------------~~~~~~l~~~~~~~~y~~sk~rLi~lD~DGTL~~~~~~ 608 (844)
++||+.+|+++||.+|+.+++.+. .+. ...+++|+++.+.++|+++++|+|++||||||++...
T Consensus 534 ~~~d~~~W~~~fl~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~- 612 (854)
T PLN02205 534 STHDVGYWARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQAS- 612 (854)
T ss_pred hhCCHHHHHHHHHHHHHHHHHHHhhhhhcccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCcc-
Confidence 999999999999999999865431 111 1126889999999999999999999999999998742
Q ss_pred CCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc-CceEEeecceEEEecCC-eeeeccccc
Q 003145 609 PGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY-NLWLAAENGMFLRCTTG-KWMTTMPEH 686 (844)
Q Consensus 609 p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l-~l~liaenG~~i~~~~~-~w~~~~~~~ 686 (844)
....|+++++++|++|++++++.|+|+|||++..|+++|+.+ +++++||||++++..++ .|.... ..
T Consensus 613 ----------~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~-~~ 681 (854)
T PLN02205 613 ----------IDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCV-PV 681 (854)
T ss_pred ----------ccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecc-hh
Confidence 145688999999999999999999999999999999999987 69999999999996444 797543 33
Q ss_pred CChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCC
Q 003145 687 LNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVG 766 (844)
Q Consensus 687 ~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~g 766 (844)
.+..|++.+..+++.|++++||+++|.|+++++|||+++||+++..|++++..++ +..+.+.++.+..|+++|||+|++
T Consensus 682 ~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l-~~~l~~~~~~v~~G~~vvEV~p~g 760 (854)
T PLN02205 682 ADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHL-ESVLANEPVTVKSGQNIVEVKPQG 760 (854)
T ss_pred hhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHH-HHHHhcCceEEEECCcEEEEEeCC
Confidence 4678999999999999999999999999999999999999999999999999998 666666678888999999999999
Q ss_pred CCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--c--------------CcEEEeCCCCcchhhhcCCHH
Q 003145 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--Q--------------FLIQVGSSINSLSKEKKRKVH 828 (844)
Q Consensus 767 vnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g--------------~~Iavgna~~~~a~~~l~~~~ 828 (844)
+|||.|+++|++.+.. ..+++|+++|||| +.|| ||+ + ++|.||. .++.|+++|+++.
T Consensus 761 vnKG~Al~~Ll~~~~~---~g~~~d~vl~~GD-D~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~-~~S~A~y~L~d~~ 835 (854)
T PLN02205 761 VSKGLVAKRLLSIMQE---RGMLPDFVLCIGD-DRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQ-KPSKAKYYLDDTA 835 (854)
T ss_pred CCHHHHHHHHHHHHHh---cCCCcccEEEEcC-CccHHHHHHHhhhhccCCcccccccceeEEECC-CCccCeEecCCHH
Confidence 9999999999865320 1167899999999 8887 998 1 6789997 5889999999999
Q ss_pred HHHHHHHHHhhccC
Q 003145 829 QLFGIFLRFSYSGV 842 (844)
Q Consensus 829 ~v~~~l~~~~~~~~ 842 (844)
+|..+|+.|.....
T Consensus 836 eV~~lL~~L~~~~~ 849 (854)
T PLN02205 836 EIVRLMQGLASVSE 849 (854)
T ss_pred HHHHHHHHHHhcch
Confidence 99999999987654
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-152 Score=1369.23 Aligned_cols=748 Identities=70% Similarity=1.165 Sum_probs=675.5
Q ss_pred CCCCCCCCcEEEEEcCCCcceEecCCCcEEEEecCCcHHHhhcccccCCcEEEEeCCCCCCCchhhhHHHHhccCceEEE
Q 003145 87 DGRTFSRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIP 166 (844)
Q Consensus 87 ~~~~~~~~~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~~~~~~~Wvg~~g~~~~~~~~~~~~~~~~~~~~~~p 166 (844)
++++. ++||||||||||+.++++++|.|++++++|||++||.+++..+++||||+|..+++++++..+...+.+++|+|
T Consensus 5 ~~~~~-~~rliiVsnrlp~~~~~~~~~~~~~~~~~ggl~~al~~~~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~p 83 (797)
T PLN03063 5 DARGE-RPRLLVVANRLPVSAKRTGEDSWSLEMSPGGLVSALLGVKEFETKWIGWPGVDVHDEIGKAALTESLAEKGCIP 83 (797)
T ss_pred cCccC-CCCEEEEECCCCccceecCCCceEEeeCCCCHHHHHHHHHhcCceEEEeCCCcCCcccchhHHHHHhhcCCeEE
Confidence 33333 78999999999999887767999999999999999999966799999999987665545556677788999999
Q ss_pred EecChHhhhhhhhhhhhhccccccCCCCCCcccccccchhhHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhHH
Q 003145 167 VFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLP 246 (844)
Q Consensus 167 V~l~~~~~~~~Y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~~~~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp 246 (844)
||| ++++++||+||||++|||+|||++.++.+.......++..|++|++||++||++|++.+++||+|||||||||+||
T Consensus 84 v~l-~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~d~vWvhDYhL~llp 162 (797)
T PLN03063 84 VFL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEEGDVVWCHDYHLMFLP 162 (797)
T ss_pred eeh-HHHHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEecchhhhHH
Confidence 999 9999999999999999999999843332221122334567999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEE
Q 003145 247 KCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLT 326 (844)
Q Consensus 247 ~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~ 326 (844)
++||++.|+++||||+|||||++|+||+||+|++|++|||+||+|||||++|++||+++|+++++++....++.++|+.+
T Consensus 163 ~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~ 242 (797)
T PLN03063 163 QYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVT 242 (797)
T ss_pred HHHHHhCCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCCceEECCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999988778899999999
Q ss_pred EEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEc
Q 003145 327 RVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAV 406 (844)
Q Consensus 327 ~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~ 406 (844)
+|.++|+|||++.|.+....+++.+....+++.++++++|++||||++.||+..+|+||++|++++|+++++++|+||+.
T Consensus 243 ~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~ 322 (797)
T PLN03063 243 RVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAV 322 (797)
T ss_pred EEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEec
Confidence 99999999999999987776777777778888888999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCC
Q 003145 407 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLK 486 (844)
Q Consensus 407 p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~ 486 (844)
|+++++++|+++++++++++++||++||+.+|.||+|+.+.++.+++.++|++|||||+||++||||||++||||||..+
T Consensus 323 psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~ 402 (797)
T PLN03063 323 PTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAK 402 (797)
T ss_pred CCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHHHh
Q 003145 487 KGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEA 566 (844)
Q Consensus 487 ~g~lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~~ 566 (844)
+|++|+||++|+++.+|.+|++|||+|++++|+||.++|+|+++||++|+++++++|++||+.+|++.||++|..+....
T Consensus 403 ~gvlVlSe~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~~~ 482 (797)
T PLN03063 403 KGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEA 482 (797)
T ss_pred CCCEEeeCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhhhh
Confidence 89999999999999997799999999999999999999999999999999999999999999999999999999988765
Q ss_pred hhccccCCCCccHHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEc
Q 003145 567 QLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS 646 (844)
Q Consensus 567 ~~~~~~~~~~l~~~~~~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~S 646 (844)
.......++.|+.+.++++|+++++++|+|||||||++..+.|. ......|+++++++|++|+++|+|.|+|+|
T Consensus 483 ~~~~~~~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~------~p~~a~p~~~l~~~L~~L~~d~~~~V~IvS 556 (797)
T PLN03063 483 ELRTRNIPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQI------KEMDLGLHPELKETLKALCSDPKTTVVVLS 556 (797)
T ss_pred hhcccCCCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCcc------ccccCCCCHHHHHHHHHHHcCCCCEEEEEe
Confidence 54555667889999999999999999999999999998754331 114567899999999999999999999999
Q ss_pred CCChhhHHHhhcccCceEEeecceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCC
Q 003145 647 GSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYAD 726 (844)
Q Consensus 647 GR~~~~l~~~~~~l~l~liaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d 726 (844)
||+...|++||+.++++++||||++++..++.|....++..+.+|++.+.++|++|++++||++||.|+++++||||++|
T Consensus 557 GR~~~~L~~~~~~~~l~l~aeHG~~~r~~~~~w~~~~~~~~~~~w~~~v~~~l~~~~~rtpGs~iE~K~~sla~HyR~ad 636 (797)
T PLN03063 557 RSGKDILDKNFGEYNIWLAAENGMFLRHTSGEWVTTMPEHMNLDWVDGVKNVFKYFTDRTPRSYVEKSETSLVWNYEYAD 636 (797)
T ss_pred CCCHHHHHHHhCCCCCcEEEeCCEEEecCCCceeeccccccChhHHHHHHHHHHHHHHhCCCcEEEEcCeEEEEEcCCCC
Confidence 99999999999998999999999999976788986544455778999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeC--CCchh
Q 003145 727 VEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF--LGKVL 804 (844)
Q Consensus 727 ~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~--~~nDM 804 (844)
|+++..|++++.++|.+..+.+.+++|+.|+++|||+|.++|||.|+++|++++........++|||+|+||+ +|+||
T Consensus 637 p~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdm 716 (797)
T PLN03063 637 VEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDV 716 (797)
T ss_pred hHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHHHHHHHHHHhhhccccCCCCCEEEEeCCCCCCcHHH
Confidence 9999999999999984445556679999999999999999999999999999862100111357999999993 36779
Q ss_pred hc-----c------------------------------CcEEEeCCCCcchhhhcCCHHHHHHHHHHHhhccCC
Q 003145 805 LT-----Q------------------------------FLIQVGSSINSLSKEKKRKVHQLFGIFLRFSYSGVQ 843 (844)
Q Consensus 805 f~-----g------------------------------~~Iavgna~~~~a~~~l~~~~~v~~~l~~~~~~~~~ 843 (844)
|+ . |+|+||. .++.|+++++++.||..+|..|..+..+
T Consensus 717 F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VG~-~~s~A~y~l~~~~eV~~lL~~l~~~~~~ 789 (797)
T PLN03063 717 YTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSCAIGQ-ARTKARYVLDSSNDVVSLLHKLAVANTT 789 (797)
T ss_pred HHhccccccccccccccccccccccccccccccccCceEEEEECC-CCccCeecCCCHHHHHHHHHHHhccCcc
Confidence 98 2 4589998 4899999999999999999999887654
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-141 Score=1277.51 Aligned_cols=714 Identities=41% Similarity=0.736 Sum_probs=657.1
Q ss_pred CcEEEEEcCCCcceEecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCc--hhhhHHHHhccCceEEEEecC
Q 003145 94 QRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDE--IGQKALTKALAEKRCIPVFLD 170 (844)
Q Consensus 94 ~~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~--~~~~~~~~~~~~~~~~pV~l~ 170 (844)
+||||||||+|+.+.+++ |.|++++++|||++||.++ +..+++||||+|...+.. ..+..+...+.+|+|+||||+
T Consensus 1 ~~livvsnr~p~~~~~~~-~~~~~~~~~ggl~~~l~~~~~~~~~~wvg~~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 79 (726)
T PRK14501 1 SRLIIVSNRLPVTVVRED-GGVELTPSVGGLATGLRSFHERGGGLWVGWPGLDLEEESEEQRARIEPRLEELGLVPVFLS 79 (726)
T ss_pred CCEEEEEcCCCcceeecC-CceEEeeCCCchHHHHHHHhhcCCeEEEEeCCCCccccchhhhhhhhhhccCceEEEEeCC
Confidence 479999999999987654 5899999999999999998 778999999999765542 222334566789999999999
Q ss_pred hHhhhhhhhhhhhhccccccCCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhHHHHH
Q 003145 171 EDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCL 249 (844)
Q Consensus 171 ~~~~~~~Y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~l 249 (844)
++++++||+||||++|||+|||++... .|+ ++|++|++||++||++|++.++++|+||||||||++||++|
T Consensus 80 ~~~~~~~y~gf~n~~lWp~~H~~~~~~--------~~~~~~w~~Y~~vN~~fA~~~~~~~~~~d~vwvhDYhl~l~p~~l 151 (726)
T PRK14501 80 AEEVDRYYEGFCNSTLWPLFHYFPEYT--------EFEDRFWESYERVNQRFAEAIAAIARPGDVVWVHDYQLMLLPAML 151 (726)
T ss_pred HHHHHHHHHHhhhccccchhcccCccc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCchhhhHHHHH
Confidence 999999999999999999999985433 466 56999999999999999999999999999999999999999
Q ss_pred HhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEE
Q 003145 250 KEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVA 329 (844)
Q Consensus 250 r~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~ 329 (844)
|++.|+++||||+|+|||++++|++||+|++|++|||+||+|||||++|++||+++|.++++++.....+++.|+.++|.
T Consensus 152 r~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~ 231 (726)
T PRK14501 152 RERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVD 231 (726)
T ss_pred HhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999887777889999999999
Q ss_pred EEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCC
Q 003145 330 AFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTR 409 (844)
Q Consensus 330 v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r 409 (844)
++|+|||++.|.+....+++.+..+.+|+.++++++|++||||++.||+..+|+||++|++++|+++++++|+||+.|+|
T Consensus 232 v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr 311 (726)
T PRK14501 232 AFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSR 311 (726)
T ss_pred EEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCC
Confidence 99999999999998777777777788888888999999999999999999999999999999999999999999999998
Q ss_pred CChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCce
Q 003145 410 TDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV 489 (844)
Q Consensus 410 ~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~ 489 (844)
++.++|+++++++++++++||++||+.+|.||+++.+.+++++++++|++|||||+||++||||||++||||||.+++|+
T Consensus 312 ~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~ 391 (726)
T PRK14501 312 TGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGV 391 (726)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCce
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999888899
Q ss_pred EEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHHHhhhc
Q 003145 490 LILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLR 569 (844)
Q Consensus 490 lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~~~~~ 569 (844)
+|+|+++|+++++ .+|++|||+|++++|++|.++|+|+.+|+++|++++++++.+||+.+|+++|+..|.++...+...
T Consensus 392 ~vls~~~G~~~~l-~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~~~~~~ 470 (726)
T PRK14501 392 LILSEMAGAAAEL-AEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEKNKAF 470 (726)
T ss_pred EEEecccchhHHh-CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhcc
Confidence 9999999999998 679999999999999999999999999999999999999999999999999999999987654433
Q ss_pred cccCCCCccHHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCC
Q 003145 570 IKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (844)
Q Consensus 570 ~~~~~~~l~~~~~~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~ 649 (844)
....++.|+++.+.++|+.+++|||+|||||||++...+| ....++++++++|++|++++|+.|+|+|||+
T Consensus 471 ~~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~---------~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~ 541 (726)
T PRK14501 471 ASKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDP---------ELAVPDKELRDLLRRLAADPNTDVAIISGRD 541 (726)
T ss_pred ccccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCc---------ccCCCCHHHHHHHHHHHcCCCCeEEEEeCCC
Confidence 3344678899999999999999999999999999976555 3567899999999999998999999999999
Q ss_pred hhhHHHhhcccCceEEeecceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhh
Q 003145 650 RNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEF 729 (844)
Q Consensus 650 ~~~l~~~~~~l~l~liaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~ 729 (844)
+..++++|+.+++++|++||++++..++.|.... ..+..|++.+.++++.+.++++|+++|.|+.+++|||+++|+++
T Consensus 542 ~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~--~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~ 619 (726)
T PRK14501 542 RDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLE--PVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPEL 619 (726)
T ss_pred HHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECC--CcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHH
Confidence 9999999999899999999999997777897643 24678999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc-
Q 003145 730 GRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT- 806 (844)
Q Consensus 730 ~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~- 806 (844)
+..++.++.+++ ...+.+..+.++.|+.++||+|+++|||.|++.|++. .++|+++|||| +.|| ||+
T Consensus 620 ~~~~a~~l~~~l-~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~--------~~~d~vl~~GD-~~nDe~Mf~~ 689 (726)
T PRK14501 620 GEARANELILAL-SSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEA--------GPYDFVLAIGD-DTTDEDMFRA 689 (726)
T ss_pred HHHHHHHHHHHH-HHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhc--------CCCCEEEEECC-CCChHHHHHh
Confidence 998899998888 6666667788899999999999999999999999983 46899999999 8888 997
Q ss_pred ----cCcEEEeCCCCcchhhhcCCHHHHHHHHHHHhh
Q 003145 807 ----QFLIQVGSSINSLSKEKKRKVHQLFGIFLRFSY 839 (844)
Q Consensus 807 ----g~~Iavgna~~~~a~~~l~~~~~v~~~l~~~~~ 839 (844)
+++|+|||+ ++.|+++++++++|..+|+.|++
T Consensus 690 ~~~~~~~v~vG~~-~s~A~~~l~~~~eV~~~L~~l~~ 725 (726)
T PRK14501 690 LPETAITVKVGPG-ESRARYRLPSQREVRELLRRLLD 725 (726)
T ss_pred cccCceEEEECCC-CCcceEeCCCHHHHHHHHHHHhc
Confidence 589999995 77899999999999999999875
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-118 Score=1039.33 Aligned_cols=707 Identities=46% Similarity=0.786 Sum_probs=655.8
Q ss_pred CCcEEEEEcCCCcceE-ecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchhhhHHHHhccCceEEEEecC
Q 003145 93 RQRLLVVANRLPVSAI-RRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLD 170 (844)
Q Consensus 93 ~~~livvsnrlP~~~~-~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~~~~~~~~~~~~~~~~~pV~l~ 170 (844)
+.|+|+|||+||+.+. +.+++.|.+++++|||++++.+. ++.+..||||.|..++++++.......+...+|+||+++
T Consensus 2 ~~r~i~vsn~lp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~ 81 (732)
T KOG1050|consen 2 RPRIIVVSNRLPLKASKRTDTGKWSFSFSPGSLVSQLKGIFREMEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPVFLD 81 (732)
T ss_pred CceEEEEEccCceecccccCCCceeeecCCCCchhhhhcccccceeeEEeeccccCchhhHhHhhhhhhhhcCceeeecC
Confidence 5789999999999984 44588999999999999999987 778899999999888888877777888899999999999
Q ss_pred hHhhhhhhhhhhhhccccccCCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhHHHHH
Q 003145 171 EDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCL 249 (844)
Q Consensus 171 ~~~~~~~Y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~l 249 (844)
++...++|++|||++|||+|||...+.... .. .|+ +.|++|..+|++||++|++.|++||+|||||||||++|+++
T Consensus 82 ~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~--~~-~~~~~~w~~y~~~n~~f~d~ive~~~~~d~vwihdyhlmllp~~l 158 (732)
T KOG1050|consen 82 DELFDSYYNGYCKSILWPLFHYMLIPSEPA--FK-LFDLELWKAYVKVNQAFADKIVEVYEEGDIVWIHDYHLMLLPQML 158 (732)
T ss_pred CchhhhhhhhhhhhcccceeecccCCCchh--hh-hhHHHHHHHHHHHhHHHHHHHHHhccCCCcEEEEcchhhccchhh
Confidence 999999999999999999999993332111 11 344 56999999999999999999999999999999999999999
Q ss_pred HhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccC----CCceeeCCeE
Q 003145 250 KEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGT----PEGVEDQGRL 325 (844)
Q Consensus 250 r~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~----~~~v~~~g~~ 325 (844)
|+...+++||||+|.|||++|+|+|+|.|++|+.+|+++|+||||+++|+|||+++|.|+++++.. ..++.+.||.
T Consensus 159 r~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~ 238 (732)
T KOG1050|consen 159 RERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRD 238 (732)
T ss_pred hcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccce
Confidence 999999999999999999999999999999999999999999999999999999999999999876 4568999999
Q ss_pred EEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEE
Q 003145 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIA 405 (844)
Q Consensus 326 ~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~ 405 (844)
+.|.++|+|||+.+|......+.+..+..+++..+.++++|++|||+|+.||+..++.||++||++||+++++|+|+||+
T Consensus 239 ~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~ 318 (732)
T KOG1050|consen 239 VSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIE 318 (732)
T ss_pred eeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEe
Confidence 99999999999999999988888889999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccC
Q 003145 406 VPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDL 485 (844)
Q Consensus 406 ~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~ 485 (844)
.|+++++++|++++.++..++.+||++||+..+.||+++...++..++.++|.+||+++++|++|||||+++||++|+.+
T Consensus 319 ~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~ 398 (732)
T KOG1050|consen 319 NPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQEN 398 (732)
T ss_pred cCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHHH
Q 003145 486 KKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 565 (844)
Q Consensus 486 ~~g~lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~ 565 (844)
+.+++|+|+|+|+.+.++++++++||||.++++.+|..+|+|+.+++..|+...+.++..|+...|+..|+..+.+....
T Consensus 399 ~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~~~~~~l~~~~~~ 478 (732)
T KOG1050|consen 399 KKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAKSFLQGLKRIWKV 478 (732)
T ss_pred cCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHHHHHHhhhhhhhh
Confidence 88999999999999999889999999999999999999999999999999999999999999999999999988888877
Q ss_pred hhhccccCCCCccHHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEE
Q 003145 566 AQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVL 645 (844)
Q Consensus 566 ~~~~~~~~~~~l~~~~~~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~ 645 (844)
.. ...+.++.|..+.++..|++|++|+|++|||||+++... ..+...|+.||+||+|+|+|+
T Consensus 479 ~~-~~~~~~~~l~~~~~i~~y~~s~~rli~ldyd~t~~~~~~-----------------~~~~~~l~~L~~dp~n~v~i~ 540 (732)
T KOG1050|consen 479 GF-LGFRVTPLLTAEHIVSDYKKSKKRLILLDYDLTLIPPRS-----------------IKAISILKDLCSDPKNIVYIV 540 (732)
T ss_pred cc-cccccccccChhHhhhhhhhccceEEEecccccccCCCC-----------------chHHHHHHHHhcCCCCeEEEE
Confidence 66 334445668999999999999999999999999887631 119999999999999999999
Q ss_pred cCCChhhHHHhhccc-CceEEeecceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeec
Q 003145 646 SGSDRNVLDKNFQEY-NLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKY 724 (844)
Q Consensus 646 SGR~~~~l~~~~~~l-~l~liaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~ 724 (844)
|||++..+++|+... ++|++||||+++|.+++ |++.. .+++|++.+.++|++|++|||||++|.|+++++|||++
T Consensus 541 s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~-w~~~~---~~~~w~~~v~~i~~~~~ert~GS~ie~k~~~l~~hy~~ 616 (732)
T KOG1050|consen 541 SGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK-WETCV---LDLDWKDLVKDIFQYYTERTPGSYIERKETALVWHYRN 616 (732)
T ss_pred EccCchhhhhhccccccceeecccCceeccCCc-eeeec---ccccHHHHHHHHHHHHHhcCCCceecccCceEEEeeec
Confidence 999999999998777 89999999999998666 98765 68899999999999999999999999999999999999
Q ss_pred CChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCc--
Q 003145 725 ADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGK-- 802 (844)
Q Consensus 725 ~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~n-- 802 (844)
+|+++|..||+++.++| .. .+.++.|+.|+..|||+|.|+|||.|+.+++..+. .++||++|+|| +..
T Consensus 617 ad~~~g~~qA~el~~~l-~~--~~~~~~v~~g~~~Vev~~~gvsk~~~~~~~~~~~~------~~~df~~c~g~-d~tDe 686 (732)
T KOG1050|consen 617 ADPEFGELQAKELLEHL-ES--KNEPVEVVRGKHIVEVRPQGVSKGLAAERILSEMV------KEPDFVLCIGD-DRTDE 686 (732)
T ss_pred cCcchhHHHHHHHHHHh-cc--cCCCeEEEecCceEEEcccccchHHHHHHHHHhcC------CCcceEEEecC-CCChH
Confidence 99999999999999999 44 67789999999999999999999999999999886 46899999999 654
Q ss_pred hhhc-------------cCcEEEeCCCCcchhhhcCCHHHHHHHHH
Q 003145 803 VLLT-------------QFLIQVGSSINSLSKEKKRKVHQLFGIFL 835 (844)
Q Consensus 803 DMf~-------------g~~Iavgna~~~~a~~~l~~~~~v~~~l~ 835 (844)
|||. .|.++||. .++.|++.++++.+|..+|.
T Consensus 687 d~~~~~~~~~~~~~~~~~F~~~~g~-~~t~a~~~~~~~~~v~~~l~ 731 (732)
T KOG1050|consen 687 DMFEFISKAKDPEKVEEIFACTVGQ-KPSKAKYFLDDTHEVIRLLQ 731 (732)
T ss_pred HHHHHHhhccCCcccceEEEEEcCC-CCcccccccCChHHHHhhcc
Confidence 4887 26788888 89999999999999998874
|
|
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-116 Score=982.54 Aligned_cols=450 Identities=36% Similarity=0.638 Sum_probs=417.2
Q ss_pred CcEEEEEcCCCcceEecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchhhhHHHHh-ccCceEEEEecCh
Q 003145 94 QRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKA-LAEKRCIPVFLDE 171 (844)
Q Consensus 94 ~~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~~~~~~~~~~-~~~~~~~pV~l~~ 171 (844)
+||||||||+|+.. + . +.++|||++||.++ +..+|+||||+|...+++ . .+... -.++.|.||+|++
T Consensus 2 ~rLivVSNRlp~~~---~--~---~~~~GGL~~aL~~~l~~~~g~WvGW~g~~~~~~--~-~~~~~~~~~~~~~~v~L~~ 70 (474)
T PRK10117 2 SRLVVVSNRIAPPD---E--H---KASAGGLAVGILGALKAAGGLWFGWSGETGNED--Q-PLKKVKKGNITWASFNLSE 70 (474)
T ss_pred CCEEEEECCCcCCC---C--C---CcCCCCcHHHHHHHHHhcCceEEEecCCCCCCc--c-cchhhhcCCceEEEecCCH
Confidence 68999999999632 1 1 45789999999999 888999999999753321 1 12222 2569999999999
Q ss_pred HhhhhhhhhhhhhccccccCCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhHHHHHH
Q 003145 172 DIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLK 250 (844)
Q Consensus 172 ~~~~~~Y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~lr 250 (844)
+++++||+||||++|||+|||+.... .|+ +.|++|++||++||++|++.++|||+||||||||++||++||
T Consensus 71 ~~~~~yY~gfsn~~LWPlfHy~~~~~--------~~~~~~w~~Y~~VN~~FA~~v~~~~~~~D~VWVHDYhL~llp~~LR 142 (474)
T PRK10117 71 QDYDEYYNQFSNAVLWPAFHYRLDLV--------QFQRPAWEGYLRVNALLADKLLPLLKDDDIIWIHDYHLLPFASELR 142 (474)
T ss_pred HHHHHHHhhhhhcchhhhhCCCCCcc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccHhhHHHHHHH
Confidence 99999999999999999999985333 466 569999999999999999999999999999999999999999
Q ss_pred hcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCC-CceeeCCeEEEEE
Q 003145 251 EYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP-EGVEDQGRLTRVA 329 (844)
Q Consensus 251 ~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~-~~v~~~g~~~~v~ 329 (844)
+++|+++||||+|||||++|+|++||+|++|++|||+||+|||||++|++||++||.+++|++... ..+.++|+.++|.
T Consensus 143 ~~~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~ 222 (474)
T PRK10117 143 KRGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTE 222 (474)
T ss_pred HhCCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEE
Confidence 999999999999999999999999999999999999999999999999999999999999988644 4567889999999
Q ss_pred EEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCC
Q 003145 330 AFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTR 409 (844)
Q Consensus 330 v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r 409 (844)
++|+|||++.|...+..+ +...++.+++.++++++|++||||||+|||+++|+||++||++||+|+++|+|+||+.|+|
T Consensus 223 ~~PigID~~~~~~~a~~~-~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR 301 (474)
T PRK10117 223 VYPIGIEPDEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSR 301 (474)
T ss_pred EEECeEcHHHHHHHhhch-HHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCC
Confidence 999999999999887655 4667888999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhccc-CCCc
Q 003145 410 TDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD-LKKG 488 (844)
Q Consensus 410 ~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~-~~~g 488 (844)
+++++|++++++++++|++||++||+.+|.||+|+++.++++++.++|++|||+++||++||||||++||+|||. +++|
T Consensus 302 ~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~G 381 (474)
T PRK10117 302 GDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPG 381 (474)
T ss_pred CccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999996 7899
Q ss_pred eEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHH
Q 003145 489 VLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVV 564 (844)
Q Consensus 489 ~lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~ 564 (844)
+||+|||+|++++| .+|++|||||++++|+||.+||+||.+||++|+++++++|.+||+.+|+++||.+|..+..
T Consensus 382 vLILSefAGaA~~L-~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~~ 456 (474)
T PRK10117 382 VLVLSQFAGAANEL-TSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVP 456 (474)
T ss_pred cEEEecccchHHHh-CCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhh
Confidence 99999999999999 7899999999999999999999999999999999999999999999999999999998754
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-114 Score=980.56 Aligned_cols=454 Identities=32% Similarity=0.607 Sum_probs=421.4
Q ss_pred EEcCCCcceEecCCCc--EEEEecCCcHHHhhccc-c-cCCcEEEEeCCCCCCCchhh-hHHH-HhccCceEEEEecChH
Q 003145 99 VANRLPVSAIRRGEDS--WSLEISAGGLVSALLGV-K-EFEARWIGWAGVNVPDEIGQ-KALT-KALAEKRCIPVFLDED 172 (844)
Q Consensus 99 vsnrlP~~~~~~~~~~--~~~~~~~ggl~~~l~~~-~-~~~~~Wvg~~g~~~~~~~~~-~~~~-~~~~~~~~~pV~l~~~ 172 (844)
||||||++++++++|. |++++++|||++||.++ + ..+|+||||+|...+++++. .... ....+++|.||+|+++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 80 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDGRAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKE 80 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcccceEEEeeCCCCcccccccccccccccCCceeEEEEeCCHH
Confidence 7999999999876665 77799999999999988 4 47799999999753221111 1111 2235799999999999
Q ss_pred hhhhhhhhhhhhccccccCCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhHHHHHHh
Q 003145 173 IVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE 251 (844)
Q Consensus 173 ~~~~~Y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~lr~ 251 (844)
+++.||+||||++|||+|||++... .|+ +.|++|++||++||++|++.+++||+||||||||++||++||+
T Consensus 81 ~~~~~Y~gf~n~~LWPlfH~~~~~~--------~~~~~~w~~Y~~vN~~FA~~i~~~~~~~d~vWVhDYhL~llp~~LR~ 152 (487)
T TIGR02398 81 QVDIFYHITSKEAFWPILHTFPERF--------QFREDDWQVFLKVNRAFAEAACLEAAEGATVWVHDYNLWLVPGYIRQ 152 (487)
T ss_pred HHHHHHhhhhhccccccccCCcccc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEecchhhHHHHHHHH
Confidence 9999999999999999999985433 466 5699999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCC--------------
Q 003145 252 YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPE-------------- 317 (844)
Q Consensus 252 ~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~-------------- 317 (844)
+.|+++||||+|||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|++....
T Consensus 153 ~~~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~ 232 (487)
T TIGR02398 153 LRPDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTAL 232 (487)
T ss_pred hCCCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999875432
Q ss_pred -------ceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHH
Q 003145 318 -------GVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (844)
Q Consensus 318 -------~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~ 390 (844)
++.++||.++|.++|+|||++.|.+....+++.+.+..+|++++++++|++|||||++|||+++|+||++||+
T Consensus 233 ~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~ 312 (487)
T TIGR02398 233 GEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLE 312 (487)
T ss_pred cccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHH
Confidence 3778899999999999999999999888888888899999999999999999999999999999999999999
Q ss_pred hCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCc
Q 003145 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRD 470 (844)
Q Consensus 391 ~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~E 470 (844)
+||+++++++||||+.|+|+++++|++++++++++|++||++||+.+|.||+|+++.++++++.+||++||||++||++|
T Consensus 313 ~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrD 392 (487)
T TIGR02398 313 RRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRD 392 (487)
T ss_pred hCccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHhhhhhcccCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHH
Q 003145 471 GMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQE 550 (844)
Q Consensus 471 G~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 550 (844)
|||||++||||||.+++||||+|||+|+++++ .+|++|||||++++|+||.+||+||.+||++|+++++++|.+||+.+
T Consensus 393 GmNLVa~Eyva~~~~~~GvLILSefaGaa~~l-~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~ 471 (487)
T TIGR02398 393 GLNLVAKEYVAAQGLLDGVLVLSEFAGAAVEL-KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQR 471 (487)
T ss_pred ccCcchhhHHhhhcCCCCCEEEeccccchhhc-CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHH
Confidence 99999999999998889999999999999999 88999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 003145 551 WAETFVSELND 561 (844)
Q Consensus 551 W~~~fl~~l~~ 561 (844)
|+++||.+|..
T Consensus 472 W~~~fl~~l~~ 482 (487)
T TIGR02398 472 WADEFLAAVSP 482 (487)
T ss_pred HHHHHHHHhhh
Confidence 99999998864
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-114 Score=984.76 Aligned_cols=462 Identities=54% Similarity=0.930 Sum_probs=356.4
Q ss_pred cEEEEEcCCCcceEecC-CCc--EEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCch--hhhHHHHhccCceEEEEe
Q 003145 95 RLLVVANRLPVSAIRRG-EDS--WSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEI--GQKALTKALAEKRCIPVF 168 (844)
Q Consensus 95 ~livvsnrlP~~~~~~~-~~~--~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~~--~~~~~~~~~~~~~~~pV~ 168 (844)
||||||||||+.+++++ +|. |+++.++|||+++|.++ +..+++||||+|...+.++ ++........+++|+|||
T Consensus 2 ~livVsnrlPv~~~r~~~~G~~~~~~~~~~ggL~~al~~l~~~~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~pV~ 81 (474)
T PF00982_consen 2 RLIVVSNRLPVSVKRDPDDGSWGWSWKPSAGGLVSALDPLLKKRGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCVPVF 81 (474)
T ss_dssp -------------------------GGGGS-HHHHHHHHHHHHH-EEEEEEEEEES-TTS---EEEE---ETTEEEEEEE
T ss_pred CcccccccccccccccccccccccccccCCCcHHHHHHHHHhcCCCEEEEeCCCcCccccccccchhhhcccCceEEEEE
Confidence 79999999999998876 666 88889999999999999 7799999999998776654 233344567899999999
Q ss_pred cChHhhhhhhhhhhhhccccccCCCCC-CcccccccchhhH-HHHHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhHH
Q 003145 169 LDEDIVHQYYNGYCNNILWPLFHYLGL-PQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLP 246 (844)
Q Consensus 169 l~~~~~~~~Y~~f~n~~LWp~fH~~~~-~~~~~~~~~~~~~-~~~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp 246 (844)
|+++++++||+||||++|||+|||... .+ ....|+ +.|++|++||++||++|++.+++||+|||||||||+||
T Consensus 82 l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~-----~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~D~VWVhDYhL~llP 156 (474)
T PF00982_consen 82 LSPEEYDGYYNGFCNQVLWPLFHYRLDSRP-----DLARFEEEWWEAYKRVNRRFADAIAEVYRPGDLVWVHDYHLMLLP 156 (474)
T ss_dssp E-HHHHHHHTTTHHHHTHHHHHTT-GG---------G----HHHHHHHHHHHHHHHHHHGGG--TT-EEEEESGGGTTHH
T ss_pred cCHHHHHHHHHhhhhhccCccccccccccc-----ccchhhHHHHHHHHHHHHHHHHHHHHhCcCCCEEEEeCCcHHHHH
Confidence 999999999999999999999999732 11 123466 56999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCC--ceeeCCe
Q 003145 247 KCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPE--GVEDQGR 324 (844)
Q Consensus 247 ~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~--~v~~~g~ 324 (844)
++||+++|+++||||+|||||++|+|++||+|++||+|||+||+|||||++|++||+++|++++|++.... .++++||
T Consensus 157 ~~LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr 236 (474)
T PF00982_consen 157 QMLRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGR 236 (474)
T ss_dssp HHHHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTE
T ss_pred HHHHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999987654 7999999
Q ss_pred EEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCC-CcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEE
Q 003145 325 LTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 403 (844)
Q Consensus 325 ~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~-~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~ 403 (844)
.++|.++|+|||++.|.+.+.++++.+...++++++++ +++|++|||+|++|||+++|+||++||++||+++++|+|+|
T Consensus 237 ~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQ 316 (474)
T PF00982_consen 237 RVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQ 316 (474)
T ss_dssp EEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEE
T ss_pred EEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEE
Confidence 99999999999999999999899999999999999988 59999999999999999999999999999999999999999
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcc
Q 003145 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (844)
Q Consensus 404 i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~ 483 (844)
|+.|+|+++++|++++++++++|++||++||+.+|.||+|+.+.++++++.+||++|||+++||++||||||++||+|||
T Consensus 317 i~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q 396 (474)
T PF00982_consen 317 IAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQ 396 (474)
T ss_dssp E--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS
T ss_pred EeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 003145 484 DLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561 (844)
Q Consensus 484 ~~~~g~lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~ 561 (844)
.+++|+||+|||+|++++|++++++|||||++++|+||.+||+||++||+.|+++++++|.+||+.+|+++||++|++
T Consensus 397 ~~~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 397 DDNPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDLKR 474 (474)
T ss_dssp -TS--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHT
T ss_pred cCCCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHhhC
Confidence 989999999999999999955779999999999999999999999999999999999999999999999999999874
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-110 Score=929.38 Aligned_cols=464 Identities=49% Similarity=0.851 Sum_probs=431.2
Q ss_pred CCCCCCcEEEEEcCCCcceEec-CCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchhhhHHHHhccCceEEE
Q 003145 89 RTFSRQRLLVVANRLPVSAIRR-GEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIP 166 (844)
Q Consensus 89 ~~~~~~~livvsnrlP~~~~~~-~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~~~~~~~~~~~~~~~~~p 166 (844)
++....|+|+||||+|+...+. +++......++|||+++|.++ +..+++|+||+|...+.++..........++...|
T Consensus 10 ~~~~~~r~ivvsnR~p~~~~~~~~~~~~~~~~s~ggL~~~l~~~~~~~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~~~~ 89 (486)
T COG0380 10 SPLEDSRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKPLLRVDGGTWIGWSGTTGPTDESSDDLKERIGEFTSAP 89 (486)
T ss_pred CcccCCcEEEEEccCCCcccccCCCcceeeccCCcchhhhcchhhHhhcceEEecCceeccccccchhhhhccccceEEE
Confidence 3455789999999999998643 466788899999999999999 78999999999988763332444555566899999
Q ss_pred EecChHhhhhhhhhhhhhccccccCCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhH
Q 003145 167 VFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFL 245 (844)
Q Consensus 167 V~l~~~~~~~~Y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~ll 245 (844)
|+++.+++++||++|||++|||+|||+.... .|+ ..|+.|++||++||++|++.|++||+||||||||+|+
T Consensus 90 v~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~~--------~~~~~~w~~Y~~vN~~FAd~i~~~~~~gDiIWVhDYhL~L~ 161 (486)
T COG0380 90 VILSDEDYEGYYNGFSNAILWPLFHYFIDDV--------AYERNWWDAYVKVNRKFADKIVEIYEPGDIIWVHDYHLLLV 161 (486)
T ss_pred EecCHHHHHHHHHHhhHhhhcceeeeecCcc--------ccchHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEechhhhh
Confidence 9999999999999999999999999995333 365 5699999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCcee---eC
Q 003145 246 PKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE---DQ 322 (844)
Q Consensus 246 p~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~---~~ 322 (844)
|+|||++.|+++||||+|+|||++|+|+|||+|++|++|||+||+|||||++|++||+++|+++++.. ....++ ++
T Consensus 162 P~mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~-~~~~~~~~~~~ 240 (486)
T COG0380 162 PQMLRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVT-GDADIRFNGAD 240 (486)
T ss_pred HHHHHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhcccc-ccccccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999865 222333 44
Q ss_pred CeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCC-CcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEE
Q 003145 323 GRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVL 401 (844)
Q Consensus 323 g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~-~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~L 401 (844)
|+.+++.++|+|||+..|.....++.++.++.++++.+.+ +++|++|||||++||++++++||++||++||+|++||+|
T Consensus 241 ~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvl 320 (486)
T COG0380 241 GRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVL 320 (486)
T ss_pred CceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEE
Confidence 7999999999999999999999888888888899988876 999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhh
Q 003145 402 LQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVA 481 (844)
Q Consensus 402 v~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama 481 (844)
+||+.|+|+++++|+.++.+++++|++||++||+++|.||+|++..++++++.+||+.|||+++||++||||||++||+|
T Consensus 321 iQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa 400 (486)
T COG0380 321 LQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVA 400 (486)
T ss_pred EEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 003145 482 CQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561 (844)
Q Consensus 482 ~~~~~~g~lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~ 561 (844)
||.+++|+||+|||+|++.+| .++++|||||.+++|++|.+||+|+.+||++|++.+++.|.+||+++|+++|+.+|..
T Consensus 401 ~q~~~~G~LiLSeFaGaa~~L-~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~ 479 (486)
T COG0380 401 AQRDKPGVLILSEFAGAASEL-RDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLAQ 479 (486)
T ss_pred hhcCCCCcEEEeccccchhhh-ccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 999889999999999999999 7799999999999999999999999999999999999999999999999999999986
Q ss_pred h
Q 003145 562 T 562 (844)
Q Consensus 562 ~ 562 (844)
.
T Consensus 480 ~ 480 (486)
T COG0380 480 A 480 (486)
T ss_pred c
Confidence 3
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-105 Score=913.20 Aligned_cols=452 Identities=56% Similarity=0.926 Sum_probs=421.6
Q ss_pred cEEEEEcCCCcceEecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchhhhHH-HHhccCceEEEEecChH
Q 003145 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKAL-TKALAEKRCIPVFLDED 172 (844)
Q Consensus 95 ~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~~~~~~~-~~~~~~~~~~pV~l~~~ 172 (844)
||||||||+|+.+.++ + +..++|||++||.++ +..+++||||+|...++++++..+ .....+++|+||||+++
T Consensus 1 ~livvsnr~p~~~~~~--~---~~~~~gGl~~al~~~~~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 75 (456)
T TIGR02400 1 RLIVVSNRLPVPITRG--G---LEPSAGGLAVALLGALKATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFLSEE 75 (456)
T ss_pred CEEEEECCCCccccCC--C---CCcCCCCHHHHHHHHHhccCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEECCHH
Confidence 6999999999988653 2 567899999999998 778999999999865533322222 34457899999999999
Q ss_pred hhhhhhhhhhhhccccccCCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhHHHHHHh
Q 003145 173 IVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE 251 (844)
Q Consensus 173 ~~~~~Y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~lr~ 251 (844)
+++.||+||||++|||+|||++... .|+ +.|++|++||++||++|.+.++++|+||||||||+++|++||+
T Consensus 76 ~~~~~y~gf~n~~lWPl~H~~~~~~--------~~~~~~w~~Y~~vN~~fA~~i~~~~~~~d~vwvhDYhl~l~p~~lr~ 147 (456)
T TIGR02400 76 DVDGYYNGFSNSTLWPLFHYRPDLI--------RYDRKAWEAYRRVNRLFAEALAPLLQPGDIVWVHDYHLMLLPAMLRE 147 (456)
T ss_pred HHHHHHHHhhhhhcchhhccccccc--------ccCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEecchhhHHHHHHHh
Confidence 9999999999999999999985433 466 5699999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEE
Q 003145 252 YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAF 331 (844)
Q Consensus 252 ~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~ 331 (844)
+.|+++||||+|||||++|+|++||+|++|++|||+||+|||||++|++||+.+|.+++|++....++.+.|+.++|.++
T Consensus 148 ~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~vi 227 (456)
T TIGR02400 148 LGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAF 227 (456)
T ss_pred hCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999888888999999999999
Q ss_pred ecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCC
Q 003145 332 PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTD 411 (844)
Q Consensus 332 P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~ 411 (844)
|+|||++.|.+....+++.+....+|++++++++|++||||++.||++.+|+||++|++++|+++++++|+|++.|++++
T Consensus 228 P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~ 307 (456)
T TIGR02400 228 PIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGD 307 (456)
T ss_pred cCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccC
Confidence 99999999998877777777788899999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEE
Q 003145 412 VPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLI 491 (844)
Q Consensus 412 ~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lV 491 (844)
+++|+++++++++++++||++||+.+|.||+++.+.++++++.++|++|||||+||++||||||++||||||....|++|
T Consensus 308 ~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vV 387 (456)
T TIGR02400 308 VPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLI 387 (456)
T ss_pred chHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999976668899
Q ss_pred EeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 003145 492 LSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 560 (844)
Q Consensus 492 lSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 560 (844)
+|+++|+++++ .+|++|||+|++++|+||.++|+|+.+||++|+++++++|.+||+.+|+++||.+|.
T Consensus 388 lS~~~G~~~~l-~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 388 LSEFAGAAQEL-NGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred EeCCCCChHHh-CCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 99999999999 599999999999999999999999999999999999999999999999999998875
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-96 Score=843.00 Aligned_cols=456 Identities=54% Similarity=0.915 Sum_probs=425.5
Q ss_pred cEEEEEcCCCcceEecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchhhhHHHHhccCceEEEEecChHh
Q 003145 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDI 173 (844)
Q Consensus 95 ~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~~~~~~~~~~~~~~~~~pV~l~~~~ 173 (844)
||||||||+|+.++++++|.|+++.++|||++||.++ +..+++||||+|...+.+++.......+.+|+|+|||+++++
T Consensus 1 ~li~vsnr~p~~~~~~~~~~~~~~~~~ggl~~~l~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~ 80 (460)
T cd03788 1 RLVVVSNRLPVSIERDGDGEFEARRSAGGLATALKGLLKRTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLSPEE 80 (460)
T ss_pred CEEEEECCCCceeEEcCCCceEeccCCCcHHHHHHHHHhcCCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeCCHHH
Confidence 6999999999999988888999999999999999999 778999999999877665544456667789999999999999
Q ss_pred hhhhhhhhhhhccccccCCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhHHHHHHhc
Q 003145 174 VHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY 252 (844)
Q Consensus 174 ~~~~Y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~lr~~ 252 (844)
++.||+||||++|||+|||+.... .|+ +.|++|+++|+.||++|.+.++++|+||||||||+++|+++|++
T Consensus 81 ~~~~y~~f~~~~LWp~~H~~~~~~--------~~~~~~w~~Y~~vN~~fa~~i~~~~~~~d~iwihDyhl~llp~~lr~~ 152 (460)
T cd03788 81 FEGYYNGFSNEVLWPLFHYRLDLA--------RFDREDWEAYVRVNRKFADAIAEVLRPGDLVWVHDYHLLLLPQMLRER 152 (460)
T ss_pred HHHHHHHhhhhhcchhhcCCCCcc--------ccCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeChhhhHHHHHHHhh
Confidence 999999999999999999985432 365 56999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCC-CceeeCCeEEEEEEE
Q 003145 253 NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP-EGVEDQGRLTRVAAF 331 (844)
Q Consensus 253 ~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~-~~v~~~g~~~~v~v~ 331 (844)
.++++||||+|||||++++|+++|++++|+++|++||+||||+++|++||+++|+++++++... ..++++|+.++|.++
T Consensus 153 ~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vi 232 (460)
T cd03788 153 GPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAF 232 (460)
T ss_pred CCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999988654 678899999999999
Q ss_pred ecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCC
Q 003145 332 PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTD 411 (844)
Q Consensus 332 P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~ 411 (844)
|+|||++.|.+....++..+.+.+++..++++++|++|||+++.||+..+|+||++|++++|+++++++|+|||.|++++
T Consensus 233 p~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~ 312 (460)
T cd03788 233 PIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTD 312 (460)
T ss_pred eCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcC
Confidence 99999999998766666655566666667889999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEE
Q 003145 412 VPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLI 491 (844)
Q Consensus 412 ~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lV 491 (844)
+++++++++++++++++||.+||+.+|.||+++.+.++.+++.++|++|||||+||++||||||++||||||..++|++|
T Consensus 313 ~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV 392 (460)
T cd03788 313 VPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLI 392 (460)
T ss_pred cHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEE
Confidence 99999999999999999999999988999999999999999999999999999999999999999999999977788899
Q ss_pred EeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 003145 492 LSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559 (844)
Q Consensus 492 lSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l 559 (844)
+|+++|+++.+ .+|++|||+|++++|++|.++|+|++++++.+++++++++++||+..|+++|+.+|
T Consensus 393 ~S~~~G~~~~~-~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l 459 (460)
T cd03788 393 LSEFAGAAEEL-SGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDL 459 (460)
T ss_pred Eeccccchhhc-CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence 99999999984 89999999999999999999999999999999999999999999999999999886
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=356.20 Aligned_cols=530 Identities=14% Similarity=0.156 Sum_probs=333.7
Q ss_pred CCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhh-----------------cCCccHHH-HHhhhcCCEEEE
Q 003145 232 GDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR-----------------TLPSRSDL-LRAVLAADLVGF 293 (844)
Q Consensus 232 ~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r-----------------~lp~r~~l-l~~ll~aDlIgf 293 (844)
.|+|+.|+++-..++..|++.. ++|.+++.|.. ..+-++ .++.|-+. -..+..||.|.-
T Consensus 311 pDvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSL--gr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIa 387 (1050)
T TIGR02468 311 PYVIHGHYADAGDSAALLSGAL-NVPMVLTGHSL--GRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVIT 387 (1050)
T ss_pred CCEEEECcchHHHHHHHHHHhh-CCCEEEECccc--hhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEE
Confidence 6999999999888888888765 78999999963 111111 01222222 223567999998
Q ss_pred ecHHHHHHHHHHHH-------HHhCcccCCCceeeCCe-EEEEEEEecccChhHHhhhhcCCchH-------------HH
Q 003145 294 HTYDYARHFVSACT-------RILGFEGTPEGVEDQGR-LTRVAAFPIGIDSERFIRALEINPVQ-------------VH 352 (844)
Q Consensus 294 ~t~~~~~~Fl~~~~-------~~l~~~~~~~~v~~~g~-~~~v~v~P~GID~~~f~~~~~~~~~~-------------~~ 352 (844)
.|......-...-. +.|.. ....++..+|+ ..++.|||+|||++.|.+.....+.. ..
T Consensus 388 sT~qE~~eq~~lY~~~~~~~~~~~~~-~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~ 466 (1050)
T TIGR02468 388 STRQEIEEQWGLYDGFDVILERKLRA-RARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPI 466 (1050)
T ss_pred eCHHHHHHHHHHhccCCchhhhhhhh-hhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchh
Confidence 88766554222100 01000 00123333332 23899999999999998742211100 01
Q ss_pred HHHHHHHh--CCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHH----HHHHHHHHHHH
Q 003145 353 IKELQETF--AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEY----QRLTSQVHEIV 426 (844)
Q Consensus 353 ~~~lr~~~--~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~----~~l~~~l~~lv 426 (844)
...+++.+ +++++|++|||+++.||+..+|+||..+.+..+.. ++.| ++|.+. +.++. .....++.+++
T Consensus 467 ~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~~L~~li 541 (1050)
T TIGR02468 467 WSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRD--DIDEMSSGSSSVLTSVLKLI 541 (1050)
T ss_pred hHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEE-EEecCc--hhhhhhccchHHHHHHHHHH
Confidence 12344333 47889999999999999999999999986543221 2333 344321 11111 12234555566
Q ss_pred HHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhC----cEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc
Q 003145 427 GRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL 502 (844)
Q Consensus 427 ~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~A----Dv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l 502 (844)
.+.+.. + .|. |.|.++.++++.+|+.| ||||+||++||||++++|||||| .|+|+|..+|..+.+
T Consensus 542 ~~lgL~----g--~V~-FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcG----lPVVASdvGG~~EII 610 (1050)
T TIGR02468 542 DKYDLY----G--QVA-YPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG----LPMVATKNGGPVDIH 610 (1050)
T ss_pred HHhCCC----C--eEE-ecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhC----CCEEEeCCCCcHHHh
Confidence 554321 1 255 58999999999999988 69999999999999999999996 899999999998887
Q ss_pred --cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHHHhh-hcccc------C
Q 003145 503 --GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQ-LRIKQ------V 573 (844)
Q Consensus 503 --g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~~~-~~~~~------~ 573 (844)
|.+|++|+|.|++++|++|.++|+. ++.+.++..++++.+++|+|...++.+++.+..+...+. .+... .
T Consensus 611 ~~g~nGlLVdP~D~eaLA~AL~~LL~D-pelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~~~~~~~~~~~~~~~~~ 689 (1050)
T TIGR02468 611 RVLDNGLLVDPHDQQAIADALLKLVAD-KQLWAECRQNGLKNIHLFSWPEHCKTYLSRIASCRPRHPQWQRDTDDGEEAS 689 (1050)
T ss_pred ccCCcEEEECCCCHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccCcccccccccccccc
Confidence 6789999999999999999999985 456677778888889999999999999998887653321 10000 0
Q ss_pred ---CCC-------------------------------cc----HHHHHHH---HH----------------------hcC
Q 003145 574 ---PPS-------------------------------LR----EADSIER---YL----------------------RSN 590 (844)
Q Consensus 574 ---~~~-------------------------------l~----~~~~~~~---y~----------------------~sk 590 (844)
.+. ++ ...+..+ .. .-.
T Consensus 690 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 769 (1050)
T TIGR02468 690 EDESPGDSLRDIQDISLNLSVDGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPKGSSAKAQQGSGAGKYPALRRR 769 (1050)
T ss_pred cccCccccccccccchhhccccccccccccccccccccchhhHHHHHHHHHhhccccccccccccccccccccCcccccc
Confidence 000 00 0011111 11 112
Q ss_pred CeEEE--EecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhc---CCCCcEEEEcCCChhhHHHhhcccCc---
Q 003145 591 NRLLI--LGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCH---DPKTTIVVLSGSDRNVLDKNFQEYNL--- 662 (844)
Q Consensus 591 ~rLi~--lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~---d~g~~V~I~SGR~~~~l~~~~~~l~l--- 662 (844)
++||+ +|+|+| +.. .+.+++.++.+.+ ...+.++++|||+...+...+...++
T Consensus 770 ~~~~via~D~d~~-~~~------------------~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~ 830 (1050)
T TIGR02468 770 KRLFVIAVDCYDD-KDL------------------LQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPT 830 (1050)
T ss_pred ceEEEEEeccCCC-CCh------------------HHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCCCC
Confidence 46666 899999 222 1233333444432 23477999999999999998877633
Q ss_pred ---eEEeecceEEEecC------Ceeeec--ccccCChHH-HHHHHHHHHHHHhcC--------CCceEeeccce--EEE
Q 003145 663 ---WLAAENGMFLRCTT------GKWMTT--MPEHLNMEW-VDSLKHVFEYFTERT--------PRSHFEQRETS--LVW 720 (844)
Q Consensus 663 ---~liaenG~~i~~~~------~~w~~~--~~~~~~~~w-~~~v~~i~~~~~~rt--------~gs~iE~k~~s--l~~ 720 (844)
.+||.-|+.|+..+ ..|..- ...+++..| .+.+.+.+..+.... ++...+....+ ..+
T Consensus 831 ~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~k~ 910 (1050)
T TIGR02468 831 DFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDEESSTDHCY 910 (1050)
T ss_pred CCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceecChhhCCCceE
Confidence 58999999887631 223210 001344566 345665555543321 23333333322 333
Q ss_pred EeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEE--cCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEE-Ee
Q 003145 721 NYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQ--GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLC-IG 797 (844)
Q Consensus 721 hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~--g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vla-iG 797 (844)
.|.-.|++.. ...+++.+.|... ...+.++. +..+++|.|...|||.||++|+.+++ ++.+.+++ +|
T Consensus 911 SY~v~d~~~~-~~v~elr~~Lr~~---gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rwg------i~l~~v~VfaG 980 (1050)
T TIGR02468 911 AFKVKDPSKV-PPVKELRKLLRIQ---GLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRWG------IELANMAVFVG 980 (1050)
T ss_pred EEEecCcccC-ccHHHHHHHHHhC---CCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHcC------CChHHeEEEec
Confidence 3431122211 1135566666222 22345443 34899999999999999999999999 78898855 99
Q ss_pred eCCCc-h---hhcc--CcEEE
Q 003145 798 HFLGK-V---LLTQ--FLIQV 812 (844)
Q Consensus 798 D~~~n-D---Mf~g--~~Iav 812 (844)
| +.| | |+.| .+|.+
T Consensus 981 d-SGntD~e~Ll~G~~~tvi~ 1000 (1050)
T TIGR02468 981 E-SGDTDYEGLLGGLHKTVIL 1000 (1050)
T ss_pred c-CCCCCHHHHhCCceeEEEE
Confidence 9 555 6 7763 45554
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=308.35 Aligned_cols=244 Identities=27% Similarity=0.429 Sum_probs=207.4
Q ss_pred CccHHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHH
Q 003145 576 SLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDK 655 (844)
Q Consensus 576 ~l~~~~~~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~ 655 (844)
.+....+...|..+++++|++||||||++...+| ....++++++++|++|+++++|.|+|+|||+..+++.
T Consensus 3 ~~~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p---------~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~ 73 (266)
T COG1877 3 ALQSNQLLEPYLNARKRLLFLDYDGTLTEIVPHP---------EAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELER 73 (266)
T ss_pred hhhhhhhccccccccceEEEEeccccccccccCc---------cccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHH
Confidence 3456677888999999999999999999999888 5788999999999999999999999999999999999
Q ss_pred hhcccCceEEeecceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHH
Q 003145 656 NFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQAR 735 (844)
Q Consensus 656 ~~~~l~l~liaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~ 735 (844)
+++..+++++||||++++..++.|.....+..++.|++.+.+++++|.+++||+++|.|++++.|||++++++.+..++.
T Consensus 74 ~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~ 153 (266)
T COG1877 74 LFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALAL 153 (266)
T ss_pred hcCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHH
Confidence 99966999999999999765555433444567789999999999999999999999999999999999998876665555
Q ss_pred HHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc------c
Q 003145 736 DMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT------Q 807 (844)
Q Consensus 736 el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~------g 807 (844)
...... .. ...+++..|+..|||+|.++|||.++++++++... ..++++|.|| |.+| ||+ +
T Consensus 154 ~~~~~~-~~---~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~~------~~~~~~~aGD-D~TDE~~F~~v~~~~~ 222 (266)
T COG1877 154 AEAATL-IN---ELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELPF------DGRFPIFAGD-DLTDEDAFAAVNKLDS 222 (266)
T ss_pred HHHHhc-cc---cccEEEEeCceEEEEeeCCcchHHHHHHHHhcCCC------CCCcceecCC-CCccHHHHHhhccCCC
Confidence 444433 11 11288999999999999999999999999998762 2358999999 6555 998 6
Q ss_pred CcEEEeCCCCcchhhhcCCHHHHHHHHHHHhhc
Q 003145 808 FLIQVGSSINSLSKEKKRKVHQLFGIFLRFSYS 840 (844)
Q Consensus 808 ~~Iavgna~~~~a~~~l~~~~~v~~~l~~~~~~ 840 (844)
++|.||.. .+.|+++.+.+...+.++..+.+.
T Consensus 223 ~~v~v~~~-~t~a~~~~~~~~~~~~~l~~~~~~ 254 (266)
T COG1877 223 ITVKVGVG-STQAKFRLAGVYGFLRSLYKLLEA 254 (266)
T ss_pred ceEEecCC-cccccccccccHHHHHHHHHHHHH
Confidence 88999987 667899999999999988887653
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=310.84 Aligned_cols=235 Identities=17% Similarity=0.232 Sum_probs=192.3
Q ss_pred HHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 583 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 583 ~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
+.+|.++++++|||||||||++.+++| ..+.++++++++|++|+++ ..|+|+|||++..++++++..++
T Consensus 111 ~~~~~~~k~~~LfLDyDGTLaPIv~~P---------d~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~~~~l 179 (384)
T PLN02580 111 IANFAKGKKIALFLDYDGTLSPIVDDP---------DRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVGLTEL 179 (384)
T ss_pred HHHHhhcCCeEEEEecCCccCCCCCCc---------ccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhCCCCc
Confidence 347889999999999999999999988 5789999999999999985 47999999999999999998899
Q ss_pred eEEeecceEEEecC-----Ceeeeccc-----------ccCChHHHHHHHHHHHH---HHhcCCCceEeeccceEEEEee
Q 003145 663 WLAAENGMFLRCTT-----GKWMTTMP-----------EHLNMEWVDSLKHVFEY---FTERTPRSHFEQRETSLVWNYK 723 (844)
Q Consensus 663 ~liaenG~~i~~~~-----~~w~~~~~-----------~~~~~~w~~~v~~i~~~---~~~rt~gs~iE~k~~sl~~hy~ 723 (844)
+++|+||++++... ..|...+. .....+|.+.+.++++. +++++||+++|.|+++++||||
T Consensus 180 ~laGsHG~e~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR 259 (384)
T PLN02580 180 YYAGSHGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYR 259 (384)
T ss_pred cEEEeCCceeecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeC
Confidence 99999999987421 11221100 01245677666666655 5667899999999999999999
Q ss_pred cCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEe-CCCCHHHHHHHHHHHhcccCcCCCCC-c--eEEEEeeC
Q 003145 724 YADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRA-VGVTKGAAIDRILAEIVHSKKMKTAI-D--YVLCIGHF 799 (844)
Q Consensus 724 ~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p-~gvnKG~al~~Ll~~l~~~~~~~~~~-d--~vlaiGD~ 799 (844)
+++++++..++.++...+ ... ..+.+..|++++||+| .++|||.|+++|+++++ +.. + .++||||
T Consensus 260 ~a~~~~~~~~~~~l~~~l-~~~---~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g------~~~~d~~~pi~iGD- 328 (384)
T PLN02580 260 NVDEKNWPLVAQCVHDVL-KKY---PRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLG------LSNCDDVLPIYIGD- 328 (384)
T ss_pred CCCchHHHHHHHHHHHHH-HhC---CceEEEeCCeEEEEecCCCCCHHHHHHHHHHhcC------CCcccceeEEEECC-
Confidence 998887666666666655 321 2488899999999999 59999999999999988 332 2 3599999
Q ss_pred CCch--hhc-------cCcEEEeCC-CCcchhhhcCCHHHHHHHHHHHhh
Q 003145 800 LGKV--LLT-------QFLIQVGSS-INSLSKEKKRKVHQLFGIFLRFSY 839 (844)
Q Consensus 800 ~~nD--Mf~-------g~~Iavgna-~~~~a~~~l~~~~~v~~~l~~~~~ 839 (844)
+.|| ||+ |++|+|||+ .++.|+++|+++.+|..||++|..
T Consensus 329 D~TDedmF~~L~~~~~G~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~ 378 (384)
T PLN02580 329 DRTDEDAFKVLREGNRGYGILVSSVPKESNAFYSLRDPSEVMEFLKSLVT 378 (384)
T ss_pred CchHHHHHHhhhccCCceEEEEecCCCCccceEEcCCHHHHHHHHHHHHH
Confidence 8887 997 789999997 478899999999999999999875
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-35 Score=307.69 Aligned_cols=219 Identities=34% Similarity=0.550 Sum_probs=144.7
Q ss_pred EEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCceEEeecceEEEe
Q 003145 595 ILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRC 674 (844)
Q Consensus 595 ~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~liaenG~~i~~ 674 (844)
||||||||++...+| ....++++++++|++|+++++|.|+|+|||+...++.+++..+++++|+||++++.
T Consensus 1 ~lDyDGTL~p~~~~p---------~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~ 71 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDP---------DAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRR 71 (235)
T ss_dssp EEE-TTTSS---S-G---------GG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEE
T ss_pred CcccCCccCCCCCCc---------cccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEecc
Confidence 799999999998877 57889999999999999999999999999999997666666689999999999997
Q ss_pred cCC-eeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHHHHHHHHhcCCCC-CCCeE
Q 003145 675 TTG-KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPIS-NASVE 752 (844)
Q Consensus 675 ~~~-~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~-~~~~~ 752 (844)
.++ .|.... ...+..|++.+.++++++.+++||+++|.|+++++|||++++++++..++.++.+++ .+... ..+++
T Consensus 72 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l-~~~~~~~~~~~ 149 (235)
T PF02358_consen 72 PGGSEWTNLP-ADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQL-REILASHPGLE 149 (235)
T ss_dssp TTE-EEE-TT-GGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHH-HHHHHHH-T-E
T ss_pred Cccccccccc-cccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHH-HHHHHhCCCEE
Confidence 555 465422 456678999999999999999999999999999999999999999988888888888 43333 34799
Q ss_pred EEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--------cCcEEEeCCC----Cc
Q 003145 753 VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--------QFLIQVGSSI----NS 818 (844)
Q Consensus 753 v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--------g~~Iavgna~----~~ 818 (844)
++.|+++|||+|.+++||.|++.|+++++.. ..++++++|+|| |.+| ||+ +++|.||... ++
T Consensus 150 v~~g~~~vEvrp~~~~KG~av~~ll~~~~~~---~~~~~~~l~~GD-D~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t 225 (235)
T PF02358_consen 150 VVPGKKVVEVRPPGVNKGSAVRRLLEELPFA---GPKPDFVLYIGD-DRTDEDAFRALRELEEGGFGIKVGSVSVGEKPT 225 (235)
T ss_dssp EEE-SSEEEEE-TT--HHHHHHHHHTTS------------EEEEES-SHHHHHHHHTTTTS----EEEEES---------
T ss_pred EEECCCEEEEEeCCCChHHHHHHHHHhcCcc---ccccceeEEecC-CCCCHHHHHHHHhcccCCCCeEEEeeccccccc
Confidence 9999999999999999999999999987621 123689999999 7666 887 4689999975 79
Q ss_pred chhhhcCCHH
Q 003145 819 LSKEKKRKVH 828 (844)
Q Consensus 819 ~a~~~l~~~~ 828 (844)
.|++++++|.
T Consensus 226 ~A~y~l~~p~ 235 (235)
T PF02358_consen 226 AASYRLDDPS 235 (235)
T ss_dssp ----------
T ss_pred ccccccccCC
Confidence 9999999873
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=297.01 Aligned_cols=232 Identities=16% Similarity=0.253 Sum_probs=186.7
Q ss_pred HhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCceEEe
Q 003145 587 LRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAA 666 (844)
Q Consensus 587 ~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~lia 666 (844)
..+++.+||+||||||+|.+++| ..+.++++++++|++|++ +..|+|+|||++..++++++..++++++
T Consensus 94 ~~~~~~ll~lDyDGTL~PIv~~P---------~~A~~~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~~~~l~laG 162 (354)
T PLN02151 94 SEGKQIVMFLDYDGTLSPIVDDP---------DRAFMSKKMRNTVRKLAK--CFPTAIVSGRCREKVSSFVKLTELYYAG 162 (354)
T ss_pred hcCCceEEEEecCccCCCCCCCc---------ccccCCHHHHHHHHHHhc--CCCEEEEECCCHHHHHHHcCCccceEEE
Confidence 55678999999999999999888 467899999999999996 4689999999999999999877899999
Q ss_pred ecceEEEec--CCeeee----cccccCChHHHHHHHHHHHHH---HhcCCCceEeeccceEEEEeecCChhhhHHHHHHH
Q 003145 667 ENGMFLRCT--TGKWMT----TMPEHLNMEWVDSLKHVFEYF---TERTPRSHFEQRETSLVWNYKYADVEFGRIQARDM 737 (844)
Q Consensus 667 enG~~i~~~--~~~w~~----~~~~~~~~~w~~~v~~i~~~~---~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el 737 (844)
+||++++.. +..|+. .. .....+|.+.+.++++.+ +.++||+++|.|+++++||||+++++. +.++
T Consensus 163 sHG~e~~~p~~g~~~~~~~~~~~-~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~~----~~~l 237 (354)
T PLN02151 163 SHGMDIKGPEQGSKYKKENQSLL-CQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEENK----WSDL 237 (354)
T ss_pred eCCceeecCCCCccccccccccc-cccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChHH----HHHH
Confidence 999999853 235642 11 123557888777777665 478999999999999999999998752 2334
Q ss_pred HHHHhcCCCCCCC-eEEEEcCcEEEEEeC-CCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc-------
Q 003145 738 LQHLWTGPISNAS-VEVVQGSKSVEVRAV-GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT------- 806 (844)
Q Consensus 738 ~~~L~~~~~~~~~-~~v~~g~~~vEV~p~-gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~------- 806 (844)
..++ ..++.+.+ +.+..|++++||+|. ++|||.|++.|++.++.. ....++++|||| |.+| ||+
T Consensus 238 ~~~l-~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~---~~~~~~pvyiGD-D~TDEDaF~~L~~~~~ 312 (354)
T PLN02151 238 ANQV-RSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYA---NCTDVFPIYIGD-DRTDEDAFKILRDKKQ 312 (354)
T ss_pred HHHH-HHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccc---cCCCCeEEEEcC-CCcHHHHHHHHhhcCC
Confidence 4444 33334434 789999999999995 999999999999987631 012468999999 6555 887
Q ss_pred cCcEEEeCC-CCcchhhhcCCHHHHHHHHHHHhh
Q 003145 807 QFLIQVGSS-INSLSKEKKRKVHQLFGIFLRFSY 839 (844)
Q Consensus 807 g~~Iavgna-~~~~a~~~l~~~~~v~~~l~~~~~ 839 (844)
|++|.||.. .++.|+++|+++++|..||++|..
T Consensus 313 G~gI~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~ 346 (354)
T PLN02151 313 GLGILVSKYAKETNASYSLQEPDEVMEFLERLVE 346 (354)
T ss_pred CccEEeccCCCCCcceEeCCCHHHHHHHHHHHHH
Confidence 688999963 578999999999999999999875
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=297.49 Aligned_cols=236 Identities=15% Similarity=0.228 Sum_probs=185.1
Q ss_pred HHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCce
Q 003145 584 ERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLW 663 (844)
Q Consensus 584 ~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~ 663 (844)
.++...++.+||+||||||++.+++| ..+.++++++++|++|++ ++.|+|+|||++..+.++++..+++
T Consensus 104 ~~~~~~k~~llflD~DGTL~Piv~~p---------~~a~i~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~l~~l~ 172 (366)
T PLN03017 104 MEASRGKQIVMFLDYDGTLSPIVDDP---------DKAFMSSKMRRTVKKLAK--CFPTAIVTGRCIDKVYNFVKLAELY 172 (366)
T ss_pred HHHhcCCCeEEEEecCCcCcCCcCCc---------ccccCCHHHHHHHHHHhc--CCcEEEEeCCCHHHHHHhhcccCce
Confidence 34456688999999999999988767 345899999999999994 7899999999999999997665789
Q ss_pred EEeecceEEEecCCeeee-------cccccCChHHHHHHHHH---HHHHHhcCCCceEeeccceEEEEeecCChhhhHHH
Q 003145 664 LAAENGMFLRCTTGKWMT-------TMPEHLNMEWVDSLKHV---FEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQ 733 (844)
Q Consensus 664 liaenG~~i~~~~~~w~~-------~~~~~~~~~w~~~v~~i---~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~q 733 (844)
++++||++++..++.|.. .. ......|.+.+.++ ++.+++++||++||.|+++++||||+++++.
T Consensus 173 l~g~hGa~i~~p~~~~~~~~~~~~~~~-~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~---- 247 (366)
T PLN03017 173 YAGSHGMDIKGPAKGFSRHKRVKQSLL-YQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKK---- 247 (366)
T ss_pred EEEcCCcEEecCCCcceeccccccccc-cccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHH----
Confidence 999999999854333321 00 11234576666666 5567788999999999999999999998753
Q ss_pred HHHHHHHHhcCCCCCC-CeEEEEcCcEEEEEeC-CCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCc--hhhc---
Q 003145 734 ARDMLQHLWTGPISNA-SVEVVQGSKSVEVRAV-GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGK--VLLT--- 806 (844)
Q Consensus 734 a~el~~~L~~~~~~~~-~~~v~~g~~~vEV~p~-gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~n--DMf~--- 806 (844)
+.++..++ ...+.+. .+.+..|++++||+|. ++|||.|+++|++.++... .+.++++|||| |.+ |||+
T Consensus 248 ~~~l~~~~-~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~---~~~~~pvyiGD-D~TDEDaF~~L~ 322 (366)
T PLN03017 248 WSELVLQV-RSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGN---TNNVFPVYIGD-DRTDEDAFKMLR 322 (366)
T ss_pred HHHHHHHH-HHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhccccc---CCCceEEEeCC-CCccHHHHHHHh
Confidence 23344444 3333343 3789999999999995 9999999999999987311 12568999999 654 5887
Q ss_pred ----cCcEEEeCC-CCcchhhhcCCHHHHHHHHHHHhhc
Q 003145 807 ----QFLIQVGSS-INSLSKEKKRKVHQLFGIFLRFSYS 840 (844)
Q Consensus 807 ----g~~Iavgna-~~~~a~~~l~~~~~v~~~l~~~~~~ 840 (844)
|++|.||.. .++.|+++|+++.+|..||++|.+.
T Consensus 323 ~~~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~ 361 (366)
T PLN03017 323 DRGEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVEW 361 (366)
T ss_pred hcCCceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHHH
Confidence 589999973 5788999999999999999999763
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-32 Score=290.79 Aligned_cols=224 Identities=18% Similarity=0.202 Sum_probs=185.7
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCceEEeecce
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGM 670 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~liaenG~ 670 (844)
+++|++||||||++...+| ....++++++++|++|++++++.|+|+|||+...+.++++.+++.++++||+
T Consensus 14 ~~li~~D~DGTLl~~~~~p---------~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa 84 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHP---------DQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGA 84 (266)
T ss_pred CEEEEEecCCCCCCCCCCc---------ccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCC
Confidence 6899999999999987766 3678999999999999987899999999999999999999888889999999
Q ss_pred EEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCC
Q 003145 671 FLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNAS 750 (844)
Q Consensus 671 ~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~~~ 750 (844)
+++..++.|.. ...+.+|...+.+.++.+..++||+++|.|+.+++|||++++.+ .....++.+.+ .+... .
T Consensus 85 ~i~~~~~~~~~---~~l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~--~~~~~~l~~~i-~~~~~--~ 156 (266)
T PRK10187 85 ERRDINGKTHI---VHLPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQH--EDALLALAQRI-TQIWP--Q 156 (266)
T ss_pred eeecCCCCeee---ccCChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCcc--HHHHHHHHHHH-HhhCC--c
Confidence 99864444432 23455677777888888888999999999999999999877422 11123333343 22121 3
Q ss_pred eEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc------cCcEEEeCCCCcchhh
Q 003145 751 VEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT------QFLIQVGSSINSLSKE 822 (844)
Q Consensus 751 ~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~------g~~Iavgna~~~~a~~ 822 (844)
+.+.+|+.++||+|+++|||.|+++|+++++ +..++++|||| +.|| ||+ +++|+|||+. +.|++
T Consensus 157 ~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~------~~~~~v~~~GD-~~nD~~mf~~~~~~~g~~vavg~a~-~~A~~ 228 (266)
T PRK10187 157 LALQPGKCVVEIKPRGTNKGEAIAAFMQEAP------FAGRTPVFVGD-DLTDEAGFAVVNRLGGISVKVGTGA-TQASW 228 (266)
T ss_pred eEEeCCCEEEEeeCCCCCHHHHHHHHHHhcC------CCCCeEEEEcC-CccHHHHHHHHHhcCCeEEEECCCC-CcCeE
Confidence 6677899999999999999999999999998 67889999999 8888 988 7899999985 55899
Q ss_pred hcCCHHHHHHHHHHHhh
Q 003145 823 KKRKVHQLFGIFLRFSY 839 (844)
Q Consensus 823 ~l~~~~~v~~~l~~~~~ 839 (844)
+|+++++|..||..|..
T Consensus 229 ~l~~~~~v~~~L~~l~~ 245 (266)
T PRK10187 229 RLAGVPDVWSWLEMITT 245 (266)
T ss_pred eCCCHHHHHHHHHHHHH
Confidence 99999999999999874
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-32 Score=287.83 Aligned_cols=227 Identities=21% Similarity=0.293 Sum_probs=192.1
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCceEEeec
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAEN 668 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~liaen 668 (844)
||+++|+|||||||++...+| ....++++++++|++|++++++.|+|+|||+...+...+...+++++|+|
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p---------~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~~~~~~l~g~h 71 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDP---------DAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKLPGLGLAGEH 71 (244)
T ss_pred CCcEEEEEecCccccCCcCCC---------cccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCCCCceeEEeec
Confidence 578999999999999987777 36789999999999999999999999999999888776655578999999
Q ss_pred ceEEEecCC--eeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecC-ChhhhHHHHHHHHHHHhcCC
Q 003145 669 GMFLRCTTG--KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYA-DVEFGRIQARDMLQHLWTGP 745 (844)
Q Consensus 669 G~~i~~~~~--~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~-d~e~~~~qa~el~~~L~~~~ 745 (844)
|++++.++. .|... ......|++.+.++++++.++ ||+++|.|+++++||||.+ |++++..++.++..++ ..
T Consensus 72 G~~~~~~g~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~-~~- 146 (244)
T TIGR00685 72 GCEMKDNGSCQDWVNL--TEKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKI-LS- 146 (244)
T ss_pred CEEEecCCCcceeeec--hhhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHH-hc-
Confidence 999985222 35432 122257999999999999887 9999999999999999999 8888888888888776 32
Q ss_pred CCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc----------cCcEEEe
Q 003145 746 ISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT----------QFLIQVG 813 (844)
Q Consensus 746 ~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~----------g~~Iavg 813 (844)
..++.++.|+.++|++|.++|||.+++.++++++ ...++++|||| +.|| ||+ +++|+|+
T Consensus 147 --~~~~~v~~g~~~~e~~p~~~~Kg~a~~~~~~~~~------~~~~~~i~iGD-~~~D~~~~~~~~~~~~~~g~~~v~v~ 217 (244)
T TIGR00685 147 --FTDLEVMDGKAVVELKPRFVNKGEIVKRLLWHQP------GSGISPVYLGD-DITDEDAFRVVNNQWGNYGFYPVPIG 217 (244)
T ss_pred --CCCEEEEECCeEEEEeeCCCCHHHHHHHHHHhcc------cCCCceEEEcC-CCcHHHHHHHHhcccCCCCeEEEEEe
Confidence 3368889999999999999999999999999988 56789999999 8888 886 3688894
Q ss_pred CC-CCcchhhhcCCHHHHHHHHHHHh
Q 003145 814 SS-INSLSKEKKRKVHQLFGIFLRFS 838 (844)
Q Consensus 814 na-~~~~a~~~l~~~~~v~~~l~~~~ 838 (844)
.. ..+.|+++++++++|..+|++|.
T Consensus 218 ~g~~~~~A~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 218 SGSKKTVAKFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred cCCcCCCceEeCCCHHHHHHHHHHHh
Confidence 22 46679999999999999999875
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=253.34 Aligned_cols=300 Identities=23% Similarity=0.214 Sum_probs=209.1
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCC
Q 003145 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAAD 289 (844)
Q Consensus 210 ~~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aD 289 (844)
.+..|...++.++.++... ...|+||+|+++.+.++...+. .++|+.+++|+++.... . ..+..+.+.+..+|
T Consensus 65 ~~~~~~~~~~~~~~~~~~~-~~~Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~--~--~~~~~~~~~~~~~d 137 (372)
T cd03792 65 EKEIYLEWNEENAERPLLD-LDADVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN--R--RVWDFLQPYIEDYD 137 (372)
T ss_pred HHHHHHHHHHHHhcccccc-CCCCEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc--H--HHHHHHHHHHHhCC
Confidence 4677877787776653222 2569999999998777666543 36789999999875321 0 01122333345678
Q ss_pred EEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEE
Q 003145 290 LVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVM 366 (844)
Q Consensus 290 lIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vi 366 (844)
.+.+.+.++++.+ + . ..++ ++|+|||+......... ......+++++ .++++|
T Consensus 138 ~~i~~~~~~~~~~----------------~--~--~~~~-vipngvd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i 193 (372)
T cd03792 138 AAVFHLPEYVPPQ----------------V--P--PRKV-IIPPSIDPLSGKNRELS---PADIEYILEKYGIDPERPYI 193 (372)
T ss_pred EEeecHHHhcCCC----------------C--C--CceE-EeCCCCCCCccccCCCC---HHHHHHHHHHhCCCCCCcEE
Confidence 7776653322111 1 1 1234 89999997532111111 12333455556 378899
Q ss_pred EEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCC
Q 003145 367 LGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR 446 (844)
Q Consensus 367 l~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~ 446 (844)
++|||+++.||+..+|+||+.+.++.|++ .|+++|.+...+ +++.++.+++. +..+.. ..|.++..
T Consensus 194 ~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~----~l~i~G~g~~~~-~~~~~~~~~~~---~~~~~~------~~v~~~~~ 259 (372)
T cd03792 194 TQVSRFDPWKDPFGVIDAYRKVKERVPDP----QLVLVGSGATDD-PEGWIVYEEVL---EYAEGD------PDIHVLTL 259 (372)
T ss_pred EEEeccccccCcHHHHHHHHHHHhhCCCC----EEEEEeCCCCCC-chhHHHHHHHH---HHhCCC------CCeEEEec
Confidence 99999999999999999999998877765 488888653221 22333222222 221111 13665433
Q ss_pred C-CCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHH
Q 003145 447 S-LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIAR 523 (844)
Q Consensus 447 ~-v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~ 523 (844)
. ++.+++.++|++||+|++||.+||||++++|||||| .|+|+|+.+|..+.+ |.+|+++++ .+++|++|.+
T Consensus 260 ~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G----~Pvv~s~~~~~~~~i~~~~~g~~~~~--~~~~a~~i~~ 333 (372)
T cd03792 260 PPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKG----KPVIAGPVGGIPLQIEDGETGFLVDT--VEEAAVRILY 333 (372)
T ss_pred CCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcC----CCEEEcCCCCchhhcccCCceEEeCC--cHHHHHHHHH
Confidence 3 489999999999999999999999999999999996 899999999989887 567998874 6789999999
Q ss_pred HhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHH
Q 003145 524 ALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELND 561 (844)
Q Consensus 524 aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~ 561 (844)
++++ ++++.++.+++++++ +.|+|...++++++.+++
T Consensus 334 ll~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 334 LLRD-PELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHcC-HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 9986 457778888888887 689999999999987764
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.8e-25 Score=259.76 Aligned_cols=321 Identities=16% Similarity=0.187 Sum_probs=222.3
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhHHHHHHhc-----CCCCeEEEEEecC-----CCChhhh-hcCCcc-
Q 003145 211 FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY-----NSDMKVGWFLHTP-----FPSSEIH-RTLPSR- 278 (844)
Q Consensus 211 ~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~lr~~-----~~~~~i~~flH~P-----fp~~e~~-r~lp~r- 278 (844)
..-|.-+.++.++.+...-..+|||++||||..++|.++.+. ..+++++|++|.- ||...+- ..+|+.
T Consensus 590 ~~RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~ 669 (977)
T PLN02939 590 FKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQ 669 (977)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHH
Confidence 444555566666655544345699999999999985554432 3567999999985 3322211 112211
Q ss_pred ---------------HHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhh
Q 003145 279 ---------------SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRA 343 (844)
Q Consensus 279 ---------------~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~ 343 (844)
..+..++..||.|..-++.|++.-.. ..--|++. .+..+..++.+||||||++.|.|.
T Consensus 670 l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e~G~GL~~-----~L~~~~~Kl~gIlNGID~e~wnPa 742 (977)
T PLN02939 670 LDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--EGGRGLQD-----TLKFHSKKFVGILNGIDTDTWNPS 742 (977)
T ss_pred ccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--HhccchHH-----HhccccCCceEEecceehhhcCCc
Confidence 11234677799999999998887554 11111111 022345678999999999999875
Q ss_pred hcC--------Cch---HHHHHHHHHHhC------CCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEc
Q 003145 344 LEI--------NPV---QVHIKELQETFA------GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAV 406 (844)
Q Consensus 344 ~~~--------~~~---~~~~~~lr~~~~------~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~ 406 (844)
... ... ......++++++ +.++|++||||.+.||+..+++|+..+++ + ++.|+++|.
T Consensus 743 tD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~----dvqLVIvGd 816 (977)
T PLN02939 743 TDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--L----GGQFVLLGS 816 (977)
T ss_pred cccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--c----CCEEEEEeC
Confidence 321 000 011245677763 35899999999999999999999998874 2 255887874
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCC
Q 003145 407 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLK 486 (844)
Q Consensus 407 p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~ 486 (844)
+ ++ ..+++++.+++.+.+.. ..|.| .+..+......+|+.||+||+||.+|||||+.+|||+||
T Consensus 817 G-----p~-~~~e~eL~~La~~l~l~------drV~F-lG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyG--- 880 (977)
T PLN02939 817 S-----PV-PHIQREFEGIADQFQSN------NNIRL-ILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYG--- 880 (977)
T ss_pred C-----Cc-HHHHHHHHHHHHHcCCC------CeEEE-EeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCC---
Confidence 2 21 12345666666654321 12554 677887888899999999999999999999999999996
Q ss_pred CceEEEeCCCCchhhc-----------cCCeEEECCCCHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHHhcCHHHHH
Q 003145 487 KGVLILSEFAGAAQSL-----------GAGAILVNPWNITEVANAIARALN---MSPEEREKRHWHNFTHVTTHTAQEWA 552 (844)
Q Consensus 487 ~g~lVlSe~~G~~~~l-----------g~~g~lvnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~~~~v~~~~~~~W~ 552 (844)
.|+|++..+|..+.+ |.+|++|+|.|+++++++|.+++. ..++.+.++.++. ....|+|...+
T Consensus 881 -tPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~a--m~~dFSWe~~A 957 (977)
T PLN02939 881 -SVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKD--MNIDFSWDSSA 957 (977)
T ss_pred -CCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHH--HHhcCCHHHHH
Confidence 799999999998765 247999999999999999999986 2444555554433 34679999999
Q ss_pred HHHHHHHHHhH
Q 003145 553 ETFVSELNDTV 563 (844)
Q Consensus 553 ~~fl~~l~~~~ 563 (844)
+.++..+..+.
T Consensus 958 ~qYeeLY~~ll 968 (977)
T PLN02939 958 SQYEELYQRAV 968 (977)
T ss_pred HHHHHHHHHHH
Confidence 99988887664
|
|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-24 Score=245.43 Aligned_cols=273 Identities=18% Similarity=0.229 Sum_probs=203.8
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHH
Q 003145 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (844)
Q Consensus 230 ~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~ 309 (844)
...|+|++|+.. .+...++++.|++++.+.+|..|.. +.+ ..++.|.+.+. +...++.. .
T Consensus 98 ~~~~vi~v~~~~--~~~~~~~~~~~~~~~v~~~h~~~~~-~~~-------------~~~~~ii~~S~-~~~~~~~~---~ 157 (380)
T PRK15484 98 TKDSVIVIHNSM--KLYRQIRERAPQAKLVMHMHNAFEP-ELL-------------DKNAKIIVPSQ-FLKKFYEE---R 157 (380)
T ss_pred CCCcEEEEeCcH--HhHHHHHhhCCCCCEEEEEecccCh-hHh-------------ccCCEEEEcCH-HHHHHHHh---h
Confidence 357999999843 3445567778999999999987631 211 13567776664 33333321 1
Q ss_pred hCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccccCCHHHHHHHHH
Q 003145 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFE 386 (844)
Q Consensus 310 l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~l~Af~ 386 (844)
+ ...++.++|+|||.+.|.+.. ...+++.+ .++++|+++||+.+.||+..+++|+.
T Consensus 158 ~-------------~~~~i~vIpngvd~~~~~~~~--------~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A~~ 216 (380)
T PRK15484 158 L-------------PNADISIVPNGFCLETYQSNP--------QPNLRQQLNISPDETVLLYAGRISPDKGILLLMQAFE 216 (380)
T ss_pred C-------------CCCCEEEecCCCCHHHcCCcc--------hHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHHHH
Confidence 1 123578999999998876421 11234444 26789999999999999999999999
Q ss_pred HHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEc
Q 003145 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 466 (844)
Q Consensus 387 ~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~ 466 (844)
++.+++|++ .|+++|.+......+...+.+++.+++.+++. .++ +.|.++.+++..+|+.||++|+|
T Consensus 217 ~l~~~~p~~----~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~--------~v~-~~G~~~~~~l~~~~~~aDv~v~p 283 (380)
T PRK15484 217 KLATAHSNL----KLVVVGDPTASSKGEKAAYQKKVLEAAKRIGD--------RCI-MLGGQPPEKMHNYYPLADLVVVP 283 (380)
T ss_pred HHHHhCCCe----EEEEEeCCccccccchhHHHHHHHHHHHhcCC--------cEE-EeCCCCHHHHHHHHHhCCEEEeC
Confidence 999888875 48888865432222333556667766665442 355 47889999999999999999999
Q ss_pred CC-CcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeE-EECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 003145 467 SL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAI-LVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542 (844)
Q Consensus 467 S~-~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~-lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~ 542 (844)
|. .||||++++|||||| .|+|+|..+|..+.+ |.+|+ +++|.|++++|++|.+++++++ +.++.+++++.
T Consensus 284 S~~~E~f~~~~lEAma~G----~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~--~~~~~~~ar~~ 357 (380)
T PRK15484 284 SQVEEAFCMVAVEAMAAG----KPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPE--LTQIAEQAKDF 357 (380)
T ss_pred CCCccccccHHHHHHHcC----CCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHH--HHHHHHHHHHH
Confidence 97 599999999999996 899999999888877 56787 6789999999999999998764 45677777766
Q ss_pred H-HhcCHHHHHHHHHHHHHHh
Q 003145 543 V-TTHTAQEWAETFVSELNDT 562 (844)
Q Consensus 543 v-~~~~~~~W~~~fl~~l~~~ 562 (844)
+ ++|+|..-++++++.|+..
T Consensus 358 ~~~~fsw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 358 VFSKYSWEGVTQRFEEQIHNW 378 (380)
T ss_pred HHHhCCHHHHHHHHHHHHHHh
Confidence 4 7899999999999888753
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.1e-25 Score=253.23 Aligned_cols=310 Identities=23% Similarity=0.262 Sum_probs=208.6
Q ss_pred HHHHHHHHHHhhCCCCCEEEEeCccchhHHHHHHhcC----CCCeEEEEEecCCCC----hhhhhcC--Cc---------
Q 003145 217 ANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYN----SDMKVGWFLHTPFPS----SEIHRTL--PS--------- 277 (844)
Q Consensus 217 vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~lr~~~----~~~~i~~flH~Pfp~----~e~~r~l--p~--------- 277 (844)
.++...+.+...-...|+|++||+|-.++|.++++.. .+.|++++.|..-.. .+.+..+ |+
T Consensus 104 f~~~~~~~~~~~~~~pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 183 (466)
T PRK00654 104 FSWAAAEFAEGLDPRPDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLE 183 (466)
T ss_pred HHHHHHHHHHhcCCCCceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhh
Confidence 3343334333322367999999999999999998652 468999999986211 1111111 10
Q ss_pred ----cHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCcee--eCCeEEEEEEEecccChhHHhhhhcCC----
Q 003145 278 ----RSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE--DQGRLTRVAAFPIGIDSERFIRALEIN---- 347 (844)
Q Consensus 278 ----r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~--~~g~~~~v~v~P~GID~~~f~~~~~~~---- 347 (844)
...+..++..||.|...++.+++..... ..| .++. +..+..++.++|+|||.+.|.+.....
T Consensus 184 ~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~---~~~-----~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~ 255 (466)
T PRK00654 184 FYGQISFLKAGLYYADRVTTVSPTYAREITTP---EFG-----YGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAAN 255 (466)
T ss_pred cCCcccHHHHHHHhcCcCeeeCHHHHHHhccc---cCC-----cChHHHHHhcccCceEecCCCCccccCCccCcccccc
Confidence 1112234566777777776665543210 000 0010 112345789999999999987642100
Q ss_pred -------chHHHHHHHHHHhC----CCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHH
Q 003145 348 -------PVQVHIKELQETFA----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQ 416 (844)
Q Consensus 348 -------~~~~~~~~lr~~~~----~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~ 416 (844)
...+....++++++ +.++|++|||+++.||+..+++|+++++++ ++.|+++|.+ + +
T Consensus 256 ~~~~~~~~k~~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~------~~~lvivG~g---~-~--- 322 (466)
T PRK00654 256 YSADDLEGKAENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ------GGQLVLLGTG---D-P--- 322 (466)
T ss_pred cChhhhhchHHHHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc------CCEEEEEecC---c-H---
Confidence 00112345666663 568999999999999999999999998753 2558878742 1 2
Q ss_pred HHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCC
Q 003145 417 RLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA 496 (844)
Q Consensus 417 ~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~ 496 (844)
.+++++++++.+.+. .+.++.+. +.+.+..+|+.||+||+||.+||||++.+|||+|| .|+|+|..+
T Consensus 323 ~~~~~l~~l~~~~~~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G----~p~V~~~~g 389 (466)
T PRK00654 323 ELEEAFRALAARYPG--------KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYG----TLPIVRRTG 389 (466)
T ss_pred HHHHHHHHHHHHCCC--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCC----CCEEEeCCC
Confidence 234556666655432 24444554 66667899999999999999999999999999996 799999999
Q ss_pred Cchhhc--c------CCeEEECCCCHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 003145 497 GAAQSL--G------AGAILVNPWNITEVANAIARALNM--SPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (844)
Q Consensus 497 G~~~~l--g------~~g~lvnP~d~~~~A~ai~~aL~m--~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (844)
|..+.+ + .+|++|+|.|+++++++|.+++.. .++.+.++.++.. ...++|..-++++++.++++
T Consensus 390 G~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 390 GLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred CccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHHH
Confidence 999887 4 569999999999999999999863 2233444444433 26789999999988777654
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-24 Score=260.97 Aligned_cols=311 Identities=14% Similarity=0.120 Sum_probs=222.8
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhHHHHHHhc-----CCCCeEEEEEecCCCChhhhhcCCccHHHHHh
Q 003145 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY-----NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA 284 (844)
Q Consensus 210 ~~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~lr~~-----~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ 284 (844)
...-|-.++++.++.+.+.-...|||++||+|-.++|.++++. .+++|+++++|..-. ....+-.+
T Consensus 688 d~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~~---------~~n~lk~~ 758 (1036)
T PLN02316 688 DGERFGFFCHAALEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLEF---------GANHIGKA 758 (1036)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCccc---------chhHHHHH
Confidence 3455556666666666544346799999999999999999874 356899999996421 11224456
Q ss_pred hhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcC--C-----c----h-HHH
Q 003145 285 VLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI--N-----P----V-QVH 352 (844)
Q Consensus 285 ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~--~-----~----~-~~~ 352 (844)
+..||.|.--++.|++..... + . ...+..++.+||+|||++.|.|.... + + . ...
T Consensus 759 l~~AD~ViTVS~tya~EI~~~-----~------~--l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~ 825 (1036)
T PLN02316 759 MAYADKATTVSPTYSREVSGN-----S------A--IAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAA 825 (1036)
T ss_pred HHHCCEEEeCCHHHHHHHHhc-----c------C--cccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhh
Confidence 778999999898887665431 0 0 11124578999999999988764210 0 0 0 111
Q ss_pred HHHHHHHhC----CCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHH
Q 003145 353 IKELQETFA----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGR 428 (844)
Q Consensus 353 ~~~lr~~~~----~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~ 428 (844)
...++++++ +.++|++||||.+.||+..+++|+.++++. .+.||++|.+ |+ ..++.++.+++.+
T Consensus 826 k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~------~~qlVIvG~G-----pd-~~~e~~l~~La~~ 893 (1036)
T PLN02316 826 KEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER------NGQVVLLGSA-----PD-PRIQNDFVNLANQ 893 (1036)
T ss_pred HHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc------CcEEEEEeCC-----CC-HHHHHHHHHHHHH
Confidence 234666663 568999999999999999999999998763 2557777643 22 1345667777776
Q ss_pred hhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--c---
Q 003145 429 INGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G--- 503 (844)
Q Consensus 429 IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g--- 503 (844)
++..+.. .|.+ .+..+......+|+.||+||+||.+|||||+.+|||+|| .|+|++..+|..+.+ +
T Consensus 894 Lg~~~~~----rV~f-~g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~G----tppVvs~vGGL~DtV~d~d~~ 964 (1036)
T PLN02316 894 LHSSHHD----RARL-CLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYG----SIPVVRKTGGLFDTVFDVDHD 964 (1036)
T ss_pred hCccCCC----eEEE-EecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcC----CCeEEEcCCCcHhhccccccc
Confidence 6543321 2544 444554444589999999999999999999999999995 689999999999987 2
Q ss_pred ----------CCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHhH
Q 003145 504 ----------AGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELNDTV 563 (844)
Q Consensus 504 ----------~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~~~ 563 (844)
.+|++|+|.|+++++++|.++|....+.+..+....++.+ ..|+|..-++.++..++.+.
T Consensus 965 ~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 965 KERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred cccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 3799999999999999999999865433443344445554 56999999999998877653
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.9e-25 Score=251.14 Aligned_cols=312 Identities=15% Similarity=0.181 Sum_probs=201.4
Q ss_pred HHHHHHHHHHHHhhCCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChh--hhh------------cCCccHH
Q 003145 215 IKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSE--IHR------------TLPSRSD 280 (844)
Q Consensus 215 ~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e--~~r------------~lp~r~~ 280 (844)
..+...+...+.+.....|+|++|+++..++..++++.. +.|++++.|....... +.. .++.+-.
T Consensus 98 ~~~~~~l~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (439)
T TIGR02472 98 DELADNLLQHLRQQGHLPDLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIE 176 (439)
T ss_pred HHHHHHHHHHHHHcCCCCCEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhcchHHHHH
Confidence 334444444444333346999999988777777776644 6789999997532210 000 0010100
Q ss_pred H-HHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHH
Q 003145 281 L-LRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQET 359 (844)
Q Consensus 281 l-l~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~ 359 (844)
+ ...+..+|.|...+...+..-+. ... .-...++.++|+|||++.|.+....++.. ..+..++.
T Consensus 177 ~~~~~~~~ad~ii~~s~~~~~~~~~---~~~-----------~~~~~ki~vIpnGvd~~~f~~~~~~~~~~-~~~~~~~~ 241 (439)
T TIGR02472 177 AEEETLAHASLVITSTHQEIEEQYA---LYD-----------SYQPERMQVIPPGVDLSRFYPPQSSEETS-EIDNLLAP 241 (439)
T ss_pred HHHHHHHhCCEEEECCHHHHHHHHH---hcc-----------CCCccceEEECCCcChhhcCCCCccccch-hHHHHHHh
Confidence 1 12234567666555432221110 000 11235788999999999997643221111 12222222
Q ss_pred h---CCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHH----HHHHHHHHHHHHhhcc
Q 003145 360 F---AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQ----RLTSQVHEIVGRINGR 432 (844)
Q Consensus 360 ~---~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~----~l~~~l~~lv~~IN~~ 432 (844)
+ .++++|++|||+++.||+..+|+||..+.+..+.. +++| ++|.+. +.++++ ++.+++.+++.+++-
T Consensus 242 ~~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~--~l~l-i~G~g~--~~~~l~~~~~~~~~~~~~~~~~~~l- 315 (439)
T TIGR02472 242 FLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMA--NLVL-VLGCRD--DIRKMESQQREVLQKVLLLIDRYDL- 315 (439)
T ss_pred hccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhc--cEEE-EeCCcc--ccccccHHHHHHHHHHHHHHHHcCC-
Confidence 2 36789999999999999999999998642211111 2222 233211 111121 222334444444322
Q ss_pred cCCCCcccEEEeCCCCCHHHHHHHHHhC----cEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCe
Q 003145 433 FGTLTAVPIHHLDRSLDFPALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGA 506 (844)
Q Consensus 433 ~g~~~~~pv~~~~~~v~~~el~aly~~A----Dv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g 506 (844)
.+ .|. |.|.++.+++.++|+.| |+||+||.+||||++++|||||| .|+|+|..+|..+.+ |.+|
T Consensus 316 ---~~--~V~-f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G----~PvV~s~~gg~~eiv~~~~~G 385 (439)
T TIGR02472 316 ---YG--KVA-YPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACG----LPIVATDDGGPRDIIANCRNG 385 (439)
T ss_pred ---Cc--eEE-ecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhC----CCEEEeCCCCcHHHhcCCCcE
Confidence 12 255 58889999999999988 99999999999999999999996 899999999999888 4679
Q ss_pred EEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHH
Q 003145 507 ILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSEL 559 (844)
Q Consensus 507 ~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l 559 (844)
++|+|.|++++|++|.++++++ +++.++.+++++++ +.|+|+.-++++++.|
T Consensus 386 ~lv~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 386 LLVDVLDLEAIASALEDALSDS-SQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred EEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 9999999999999999999864 57777888888876 6789999888887654
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-24 Score=250.55 Aligned_cols=323 Identities=14% Similarity=0.177 Sum_probs=219.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhHHHHHHhcC------CCCeEEEEEecCCC----Chhhhh-cC
Q 003145 207 FQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYN------SDMKVGWFLHTPFP----SSEIHR-TL 275 (844)
Q Consensus 207 ~~~~~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~lr~~~------~~~~i~~flH~Pfp----~~e~~r-~l 275 (844)
|.+...-|.-.+++.++.+.+.--..|+|++||||-.++|.++++.. .++|++++.|.... +.+.+. .+
T Consensus 117 ~~d~~~rf~~f~~a~l~~~~~~~~~pDiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~ 196 (489)
T PRK14098 117 LKGSAEKVIFFNVGVLETLQRLGWKPDIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLL 196 (489)
T ss_pred CCcHHHHHHHHHHHHHHHHHhcCCCCCEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhC
Confidence 43445566666777776665432246999999999999999998653 47899999998531 111111 12
Q ss_pred Ccc------------HHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhh
Q 003145 276 PSR------------SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRA 343 (844)
Q Consensus 276 p~r------------~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~ 343 (844)
|+. .-+-.++..||.|..-++.|++........-.|++. . ...+..++.+||+|||++.|.+.
T Consensus 197 ~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~---~--l~~~~~kl~~I~NGID~~~~~p~ 271 (489)
T PRK14098 197 PEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDK---V--LEERKMRLHGILNGIDTRQWNPS 271 (489)
T ss_pred CHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHH---H--HHhcCCCeeEEeCCccccccCCc
Confidence 211 123345677888887777776653220000001100 0 11134578999999999999864
Q ss_pred hcCC--------ch---HHHHHHHHHHhC-----CCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcC
Q 003145 344 LEIN--------PV---QVHIKELQETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVP 407 (844)
Q Consensus 344 ~~~~--------~~---~~~~~~lr~~~~-----~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p 407 (844)
.... .. .+....+++.++ +.++|++|||+.+.||+..+++|+.++++. ++.|+++|.+
T Consensus 272 ~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~------~~~lvivG~G 345 (489)
T PRK14098 272 TDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL------DIQLVICGSG 345 (489)
T ss_pred ccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc------CcEEEEEeCC
Confidence 3210 00 011234555552 567999999999999999999999998752 3668888742
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCC
Q 003145 408 TRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKK 487 (844)
Q Consensus 408 ~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~ 487 (844)
+. .+++++++++.+... .|.+ .+.++.+++..+|+.||+||+||..||||++.+|||+||
T Consensus 346 -----~~--~~~~~l~~l~~~~~~--------~V~~-~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G---- 405 (489)
T PRK14098 346 -----DK--EYEKRFQDFAEEHPE--------QVSV-QTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYG---- 405 (489)
T ss_pred -----CH--HHHHHHHHHHHHCCC--------CEEE-EEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCC----
Confidence 21 234566666654321 2554 677899999999999999999999999999999999995
Q ss_pred ceEEEeCCCCchhhc------cCCeEEECCCCHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 003145 488 GVLILSEFAGAAQSL------GAGAILVNPWNITEVANAIARALNM--SPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559 (844)
Q Consensus 488 g~lVlSe~~G~~~~l------g~~g~lvnP~d~~~~A~ai~~aL~m--~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l 559 (844)
.|+|++..+|..+.+ +.+|++|+|.|+++++++|.+++.+ .++.+.++.++. ..+.++|+.-++++++.+
T Consensus 406 ~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~--~~~~fsw~~~a~~y~~lY 483 (489)
T PRK14098 406 TIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEA--MERDFSWKNSAEEYAQLY 483 (489)
T ss_pred CCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHH--hcCCCChHHHHHHHHHHH
Confidence 689999999988766 3479999999999999999998742 233333333322 236789999999998877
Q ss_pred HHh
Q 003145 560 NDT 562 (844)
Q Consensus 560 ~~~ 562 (844)
+++
T Consensus 484 ~~~ 486 (489)
T PRK14098 484 REL 486 (489)
T ss_pred HHH
Confidence 654
|
|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-24 Score=250.56 Aligned_cols=312 Identities=21% Similarity=0.256 Sum_probs=213.7
Q ss_pred HHHHHHHHHHHHHhhCCCCCEEEEeCccchhHHHHHHhcCC--CCeEEEEEecCCCC----hhhhhcCCcc---------
Q 003145 214 YIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNS--DMKVGWFLHTPFPS----SEIHRTLPSR--------- 278 (844)
Q Consensus 214 Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~lr~~~~--~~~i~~flH~Pfp~----~e~~r~lp~r--------- 278 (844)
+...+++.++.+...-...|+|++||+|..++|.++++... ++|++++.|...+. .+.+..++..
T Consensus 111 ~~~f~~a~~~~~~~~~~~~DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 190 (473)
T TIGR02095 111 FAFFSRAAAELLSGLGWQPDVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGL 190 (473)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhh
Confidence 33444555554444334679999999999999999987754 38999999986421 2222221111
Q ss_pred ------HHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCcee--eCCeEEEEEEEecccChhHHhhhhcCC---
Q 003145 279 ------SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE--DQGRLTRVAAFPIGIDSERFIRALEIN--- 347 (844)
Q Consensus 279 ------~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~--~~g~~~~v~v~P~GID~~~f~~~~~~~--- 347 (844)
..+..++..||.|...++.|++..... ..+ .+++ +..+..++.++|+|||.+.|.+.....
T Consensus 191 ~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~---~~~-----~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~ 262 (473)
T TIGR02095 191 EFYGRVNFLKGGIVYADRVTTVSPTYAREILTP---EFG-----YGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKA 262 (473)
T ss_pred hcCCchHHHHHHHHhCCcCeecCHhHHHHhcCC---cCC-----ccchhHHHhcCCCeEEEeCCCCccccCCCCCccccc
Confidence 012234556777777666665543221 000 0010 011345788999999999987642110
Q ss_pred --------chHHHHHHHHHHhC-----CCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHH
Q 003145 348 --------PVQVHIKELQETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPE 414 (844)
Q Consensus 348 --------~~~~~~~~lr~~~~-----~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~ 414 (844)
.-......++++++ ++++|++|||+.+.||++.+++|++++.++. +.|+++|.+ + +
T Consensus 263 ~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g---~-~- 331 (473)
T TIGR02095 263 NYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGTG---D-P- 331 (473)
T ss_pred CcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECCC---C-H-
Confidence 00112334666663 5789999999999999999999999987542 568878642 1 2
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeC
Q 003145 415 YQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE 494 (844)
Q Consensus 415 ~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe 494 (844)
.+++++++++.+.+. .+.+ .+..+.+++..+|+.||++++||..||||++.+|||+|| .|+|+|.
T Consensus 332 --~~~~~l~~~~~~~~~--------~v~~-~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G----~pvI~s~ 396 (473)
T TIGR02095 332 --ELEEALRELAERYPG--------NVRV-IIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYG----TVPIVRR 396 (473)
T ss_pred --HHHHHHHHHHHHCCC--------cEEE-EEcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCC----CCeEEcc
Confidence 234566666544221 2444 455688889999999999999999999999999999996 7999999
Q ss_pred CCCchhhc--c------CCeEEECCCCHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 003145 495 FAGAAQSL--G------AGAILVNPWNITEVANAIARALNM---SPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561 (844)
Q Consensus 495 ~~G~~~~l--g------~~g~lvnP~d~~~~A~ai~~aL~m---~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~ 561 (844)
.+|..+.+ + .+|++++|.|+++++++|.+++.+ .++.+.++.++.. .+.++|..-++++++.+++
T Consensus 397 ~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~Y~~ 472 (473)
T TIGR02095 397 TGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM--SQDFSWDKSAKQYVELYRS 472 (473)
T ss_pred CCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCCcHHHHHHHHHHHHh
Confidence 99999988 4 679999999999999999999873 3344455544433 3579999999998877654
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.9e-24 Score=240.24 Aligned_cols=277 Identities=17% Similarity=0.119 Sum_probs=202.6
Q ss_pred CCCEEEEeCccchhHHHHHHhc-CCCCeEEEEEecCCCC-hhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTPFPS-SEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTR 308 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~-~~~~~i~~flH~Pfp~-~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~ 308 (844)
+.|+|++|..+.-.+..++++. ....++.+++|.+-.. ..+.. ..+..+-..+-.+|.|...+....+.+..
T Consensus 118 ~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~--~~~~~~~~~~~~ad~vv~~S~~~~~~l~~---- 191 (406)
T PRK15427 118 VADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLN--HYTPEYQQLFRRGDLMLPISDLWAGRLQK---- 191 (406)
T ss_pred CCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhh--hhhHHHHHHHHhCCEEEECCHHHHHHHHH----
Confidence 4699999988776777777663 2244667788864221 11110 01112223344689888777644433321
Q ss_pred HhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHH
Q 003145 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388 (844)
Q Consensus 309 ~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~l 388 (844)
+|. ...++.++|+|||++.|.+.... ...+...|++|||+.+.||+..+|+|++.+
T Consensus 192 -~g~-----------~~~ki~vi~nGvd~~~f~~~~~~------------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l 247 (406)
T PRK15427 192 -MGC-----------PPEKIAVSRMGVDMTRFSPRPVK------------APATPLEIISVARLTEKKGLHVAIEACRQL 247 (406)
T ss_pred -cCC-----------CHHHEEEcCCCCCHHHcCCCccc------------cCCCCeEEEEEeCcchhcCHHHHHHHHHHH
Confidence 121 23468899999999988642110 112456799999999999999999999999
Q ss_pred HHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCC
Q 003145 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (844)
Q Consensus 389 l~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~ 468 (844)
.+++|+ +.|+++|. ++.. +++++++.+.+. ...+.|.|.++.+++..+|+.||+||+||.
T Consensus 248 ~~~~~~----~~l~ivG~-----G~~~----~~l~~~~~~~~l-------~~~V~~~G~~~~~el~~~l~~aDv~v~pS~ 307 (406)
T PRK15427 248 KEQGVA----FRYRILGI-----GPWE----RRLRTLIEQYQL-------EDVVEMPGFKPSHEVKAMLDDADVFLLPSV 307 (406)
T ss_pred HhhCCC----EEEEEEEC-----chhH----HHHHHHHHHcCC-------CCeEEEeCCCCHHHHHHHHHhCCEEEECCc
Confidence 887776 45887864 3433 344444444332 123446899999999999999999999998
Q ss_pred C------cCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 003145 469 R------DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (844)
Q Consensus 469 ~------EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~ 540 (844)
. ||||++++|||||| .|+|+|..+|..+.+ |.+|++|+|.|++++|++|.+++++++++++++.++++
T Consensus 308 ~~~~g~~Eg~p~~llEAma~G----~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar 383 (406)
T PRK15427 308 TGADGDMEGIPVALMEAMAVG----IPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLAAFSQLDTDELAPVVKRAR 383 (406)
T ss_pred cCCCCCccCccHHHHHHHhCC----CCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 4 99999999999996 799999999999888 66899999999999999999999977778888888898
Q ss_pred HHH-HhcCHHHHHHHHHHHHHH
Q 003145 541 THV-TTHTAQEWAETFVSELND 561 (844)
Q Consensus 541 ~~v-~~~~~~~W~~~fl~~l~~ 561 (844)
+++ ++|++...++.+.+.+++
T Consensus 384 ~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 384 EKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred HHHHHhcCHHHHHHHHHHHHhh
Confidence 887 669999999988876653
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.4e-23 Score=235.34 Aligned_cols=289 Identities=19% Similarity=0.207 Sum_probs=212.5
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhh---cCCc--cHHHH--HhhhcCCEEEEecHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR---TLPS--RSDLL--RAVLAADLVGFHTYDYARHFV 303 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r---~lp~--r~~ll--~~ll~aDlIgf~t~~~~~~Fl 303 (844)
..|+|++|++...+++.++++. .++|+++++|..++-...+. ..+. ...++ ..+..+|.|.+.+....+.+.
T Consensus 101 ~~Diih~h~~~~~~~~~~~~~~-~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~ 179 (405)
T TIGR03449 101 YYDLIHSHYWLSGQVGWLLRDR-WGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLV 179 (405)
T ss_pred CCCeEEechHHHHHHHHHHHHh-cCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHH
Confidence 5799999987666666666543 46889999997542111110 0111 11222 134468999999887777664
Q ss_pred HHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccccCCHHH
Q 003145 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQ 380 (844)
Q Consensus 304 ~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~ 380 (844)
.. .+ ....++.++|+|||.+.|.+.. ....+.++ .++++|+++||+.+.||+..
T Consensus 180 ~~----~~-----------~~~~ki~vi~ngvd~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~G~l~~~K~~~~ 236 (405)
T TIGR03449 180 RH----YD-----------ADPDRIDVVAPGADLERFRPGD--------RATERARLGLPLDTKVVAFVGRIQPLKAPDV 236 (405)
T ss_pred HH----cC-----------CChhhEEEECCCcCHHHcCCCc--------HHHHHHhcCCCCCCcEEEEecCCCcccCHHH
Confidence 31 11 1235788999999998886421 11234444 36789999999999999999
Q ss_pred HHHHHHHHHHhCcCCCCceEEEEEEcCCCCCh-HHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHh
Q 003145 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDV-PEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 459 (844)
Q Consensus 381 ~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~-~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ 459 (844)
+++|++++++++|+. ++.|+++|.+.. ++ +..+ ++++++.+.+.. ..|. |.|.++.+++..+|+.
T Consensus 237 li~a~~~l~~~~~~~--~~~l~ivG~~~~-~g~~~~~----~l~~~~~~~~l~------~~v~-~~g~~~~~~~~~~l~~ 302 (405)
T TIGR03449 237 LLRAVAELLDRDPDR--NLRVIVVGGPSG-SGLATPD----ALIELAAELGIA------DRVR-FLPPRPPEELVHVYRA 302 (405)
T ss_pred HHHHHHHHHhhCCCc--ceEEEEEeCCCC-CcchHHH----HHHHHHHHcCCC------ceEE-ECCCCCHHHHHHHHHh
Confidence 999999999888873 477888886542 23 3333 344444443321 1255 5899999999999999
Q ss_pred CcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHH
Q 003145 460 TDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHW 537 (844)
Q Consensus 460 ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~ 537 (844)
||++++||..||||++++|||||| .|+|+|..+|..+.+ |.+|++++|.|++++|++|.++++. ++.+.++..
T Consensus 303 ad~~v~ps~~E~~g~~~lEAma~G----~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~-~~~~~~~~~ 377 (405)
T TIGR03449 303 ADVVAVPSYNESFGLVAMEAQACG----TPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDD-PRTRIRMGA 377 (405)
T ss_pred CCEEEECCCCCCcChHHHHHHHcC----CCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhC-HHHHHHHHH
Confidence 999999999999999999999996 799999999988877 5679999999999999999999985 446667777
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHHh
Q 003145 538 HNFTHVTTHTAQEWAETFVSELNDT 562 (844)
Q Consensus 538 ~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (844)
.+++.++.++|+..++.+++.+.++
T Consensus 378 ~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 378 AAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 7788888999999999998877654
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-23 Score=241.74 Aligned_cols=297 Identities=21% Similarity=0.237 Sum_probs=198.7
Q ss_pred CCCEEEEeCccchhHHHHHHhc-CCCCeEEEEEecC-----CCChhhhhc--CCcc-------------HHHHHhhhcCC
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTP-----FPSSEIHRT--LPSR-------------SDLLRAVLAAD 289 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~-~~~~~i~~flH~P-----fp~~e~~r~--lp~r-------------~~ll~~ll~aD 289 (844)
..|||++||||-.++|.+++.. ..+++++++.|.. ||. ..+.. +|+. .-+-.++..||
T Consensus 133 ~pDIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad 211 (485)
T PRK14099 133 VPDIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLAD 211 (485)
T ss_pred CCCEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcC
Confidence 4699999999999999998753 3567899999974 221 11111 1110 01333455677
Q ss_pred EEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCC-----ch------HHHHHHHHH
Q 003145 290 LVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEIN-----PV------QVHIKELQE 358 (844)
Q Consensus 290 lIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~-----~~------~~~~~~lr~ 358 (844)
.|.--++.+++.....- .-.|++ + .+..+..++.+||+|||++.|.+..... .. ......+++
T Consensus 212 ~vitVS~~~a~ei~~~~-~g~gl~----~-~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~ 285 (485)
T PRK14099 212 RITTVSPTYALEIQGPE-AGMGLD----G-LLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQA 285 (485)
T ss_pred eeeecChhHHHHHhccc-CCcChH----H-HHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHH
Confidence 77666665554432100 000000 0 0011345789999999999998743210 00 011234566
Q ss_pred HhC-----CCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhccc
Q 003145 359 TFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRF 433 (844)
Q Consensus 359 ~~~-----~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~ 433 (844)
+++ +.++|++||||.+.||+..+++|+..+++. ++.|+++|.+ + + ++++++++++.+...
T Consensus 286 ~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~------~~~lvivG~G---~-~---~~~~~l~~l~~~~~~-- 350 (485)
T PRK14099 286 RFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE------GAQLALLGSG---D-A---ELEARFRAAAQAYPG-- 350 (485)
T ss_pred HcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc------CcEEEEEecC---C-H---HHHHHHHHHHHHCCC--
Confidence 652 356888899999999999999999998753 2558878752 2 2 234555656544221
Q ss_pred CCCCcccEEEeCCCCCHHHHHHHH-HhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--c-------
Q 003145 434 GTLTAVPIHHLDRSLDFPALCALY-AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G------- 503 (844)
Q Consensus 434 g~~~~~pv~~~~~~v~~~el~aly-~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g------- 503 (844)
.+.++.|. .+++..+| +.||+||+||.+||||++.+|||+|| .|+|+|..+|..+.+ +
T Consensus 351 ------~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G----~ppVvs~~GGl~d~V~~~~~~~~~~ 418 (485)
T PRK14099 351 ------QIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYG----AVPVVARVGGLADTVVDANEMAIAT 418 (485)
T ss_pred ------CEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCC----CCcEEeCCCCccceeeccccccccc
Confidence 24445665 67888877 56999999999999999999999995 688999999998876 2
Q ss_pred --CCeEEECCCCHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhH
Q 003145 504 --AGAILVNPWNITEVANAIARALN--MSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTV 563 (844)
Q Consensus 504 --~~g~lvnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~ 563 (844)
.+|++|+|.|+++++++|.+++. ..++.+.++.++++ .+.++|+.-++++++.++++.
T Consensus 419 ~~~~G~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~--~~~fSw~~~a~~y~~lY~~l~ 480 (485)
T PRK14099 419 GVATGVQFSPVTADALAAALRKTAALFADPVAWRRLQRNGM--TTDVSWRNPAQHYAALYRSLV 480 (485)
T ss_pred CCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhh--hhcCChHHHHHHHHHHHHHHH
Confidence 36999999999999999998432 23445555555443 478999999999988877664
|
|
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-23 Score=237.48 Aligned_cols=284 Identities=17% Similarity=0.195 Sum_probs=197.2
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCC--hhh-hh-cCCcc--------HH---HHHhhhcCCEEEEec
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPS--SEI-HR-TLPSR--------SD---LLRAVLAADLVGFHT 295 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~--~e~-~r-~lp~r--------~~---ll~~ll~aDlIgf~t 295 (844)
..|+|+.| +.+....++++..|++++..++|..+-. .+. |. ..+.+ .. ....+-.+|.|...+
T Consensus 87 ~pdvi~~h--~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s 164 (396)
T cd03818 87 RPDVIVAH--PGWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRNALILLALAQADAGVSPT 164 (396)
T ss_pred CCCEEEEC--CccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCEEECCC
Confidence 35999999 4556667788889999998877654321 110 10 11111 11 123456678777666
Q ss_pred HHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEec-
Q 003145 296 YDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDR- 371 (844)
Q Consensus 296 ~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdR- 371 (844)
......|.. .. ..++.++|+|||.+.|.+.... ...++... .++++|+++||
T Consensus 165 ~~~~~~~~~----------------~~--~~ki~vI~ngvd~~~f~~~~~~------~~~~~~~~~~~~~~~~i~~vgR~ 220 (396)
T cd03818 165 RWQRSTFPA----------------EL--RSRISVIHDGIDTDRLRPDPQA------RLRLPNGRVLTPGDEVITFVARN 220 (396)
T ss_pred HHHHhhCcH----------------hh--ccceEEeCCCccccccCCCchh------hhcccccccCCCCCeEEEEECCC
Confidence 533333211 01 1468899999999988753211 01111111 36788999998
Q ss_pred ccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChH--H-HHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCC
Q 003145 372 LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVP--E-YQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448 (844)
Q Consensus 372 ld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~--~-~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v 448 (844)
+.+.||+..+++|+..+.++.|+++ |+++|......+. + ...++++ ++.+++.+.+ ...|+ |.|.+
T Consensus 221 l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~---~~~V~-f~G~v 289 (396)
T cd03818 221 LEPYRGFHVFMRALPRLLRARPDAR----VVIVGGDGVSYGAPPPDGESWKQH---MLDELGGRLD---LSRVH-FLGRV 289 (396)
T ss_pred cccccCHHHHHHHHHHHHHHCCCcE----EEEEcCCCcccCCCCCCcccHHHH---HHHHhhcccC---cceEE-EeCCC
Confidence 9999999999999999988888754 8888753211000 0 0011111 2222222111 12355 58999
Q ss_pred CHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhc
Q 003145 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN 526 (844)
Q Consensus 449 ~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~ 526 (844)
+.+++.++|+.||++++||..||+|++++|||||| .|+|+|+.+|..+.+ |.+|++|+|.|++++|++|.++++
T Consensus 290 ~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G----~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~ 365 (396)
T cd03818 290 PYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACG----CLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLD 365 (396)
T ss_pred CHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCC----CCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999996 899999999988888 568999999999999999999998
Q ss_pred CCHHHHHHHHHHHHHHHHh-cCHHHHHHHHH
Q 003145 527 MSPEEREKRHWHNFTHVTT-HTAQEWAETFV 556 (844)
Q Consensus 527 m~~~er~~r~~~~~~~v~~-~~~~~W~~~fl 556 (844)
++ +++.++.+++++++.+ +++...+++++
T Consensus 366 ~~-~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 366 DP-ARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred CH-HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 65 5778888888998866 88888777765
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-22 Score=240.48 Aligned_cols=331 Identities=14% Similarity=0.141 Sum_probs=212.8
Q ss_pred HHHHHHHHHHHHHHHHhhC-CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCcc-----------
Q 003145 211 FAAYIKANQMFADVVNKHY-KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR----------- 278 (844)
Q Consensus 211 ~~~Y~~vN~~fa~~i~~~~-~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r----------- 278 (844)
|.....+....++.+.... ...|+|+.|.+.--+++..++++. ++|.+++.|..=..--....+.|.
T Consensus 364 ~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r 442 (784)
T TIGR02470 364 WPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQ 442 (784)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHhhhh
Confidence 5555566666666555443 256999999887778888887764 688888788541100000001111
Q ss_pred -HHHHHhhhcCCEEEEecHHHHHHHHHHHH-----HHhCccc---CCCceeeCCeEEEEEEEecccChhHHhhhhcCCch
Q 003145 279 -SDLLRAVLAADLVGFHTYDYARHFVSACT-----RILGFEG---TPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPV 349 (844)
Q Consensus 279 -~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~-----~~l~~~~---~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~ 349 (844)
..=+..|-.||.|.-.|+.-...-...+. ..+.++. .-+++.. ...++.++|+|+|++.|.+.......
T Consensus 443 ~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~--~~~Ki~VVpPGVD~~iF~P~~~~~~r 520 (784)
T TIGR02470 443 FTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDV--FDPKFNIVSPGADESIYFPYSDKEKR 520 (784)
T ss_pred hhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccC--CcCCeEEECCCcChhhcCCCCchhhh
Confidence 00124566799998777532111000100 0011100 0011111 22478999999999999764321110
Q ss_pred H-HHH----------HHHHHHh-----CCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCC---
Q 003145 350 Q-VHI----------KELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT--- 410 (844)
Q Consensus 350 ~-~~~----------~~lr~~~-----~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~--- 410 (844)
. ... ...++.+ .++++|++|||+++.||+..+++||.++.+. +..+.|++||++...
T Consensus 521 ~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l----~~~~~LVIVGGg~~~~~s 596 (784)
T TIGR02470 521 LTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKL----RELVNLVVVAGKLDAKES 596 (784)
T ss_pred hhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhh----CCCeEEEEEeCCcccccc
Confidence 0 000 0112333 3678999999999999999999999876432 334678888864321
Q ss_pred ChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCC-CCHHHHHHHHH----hCcEEEEcCCCcCCChhHhhhhhcccC
Q 003145 411 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS-LDFPALCALYA----VTDVALVTSLRDGMNLVSYEFVACQDL 485 (844)
Q Consensus 411 ~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~-v~~~el~aly~----~ADv~v~~S~~EG~~Lv~~Eama~~~~ 485 (844)
...+..+..+++.+++.+.+. .+ .|.+ .|. .+..++..+|+ .+||||+||.+||||||++||||||
T Consensus 597 ~d~ee~~~i~~L~~la~~~gL----~g--~V~f-lG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcG-- 667 (784)
T TIGR02470 597 KDREEQAEIEKMHNLIDQYQL----HG--QIRW-IGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCG-- 667 (784)
T ss_pred cchhHHHHHHHHHHHHHHhCC----CC--eEEE-ccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcC--
Confidence 111222334456666665432 11 3664 554 45666667776 2479999999999999999999996
Q ss_pred CCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHH
Q 003145 486 KKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN---MSPEEREKRHWHNFTHV-TTHTAQEWAETFVSEL 559 (844)
Q Consensus 486 ~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l 559 (844)
.|+|+|..+|..+.+ |.+|++|+|.|++++|++|.++++ .+++.+.++.++++++| ++|+|...++++++..
T Consensus 668 --lPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 668 --LPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred --CCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 899999999999988 678999999999999999999874 34556777777778876 7799999999988655
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.7e-23 Score=237.32 Aligned_cols=314 Identities=22% Similarity=0.253 Sum_probs=213.0
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhHHHHHHhcC-----CCCeEEEEEecCCCCh----hhhhc--CCc--
Q 003145 211 FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYN-----SDMKVGWFLHTPFPSS----EIHRT--LPS-- 277 (844)
Q Consensus 211 ~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~lr~~~-----~~~~i~~flH~Pfp~~----e~~r~--lp~-- 277 (844)
...|...++...+.+.+.-...|+|++||+|-.++|.+++... .+.|++|+.|.+.+.. ..+.. +++
T Consensus 109 ~~~~~~f~~~~~~~l~~~~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~ 188 (476)
T cd03791 109 AERFALFSRAALELLRRLGWKPDIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEE 188 (476)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccc
Confidence 3344445555555555444467999999999999999998763 5789999999874321 11111 111
Q ss_pred -----------c-HHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCcee--eCCeEEEEEEEecccChhHHhhh
Q 003145 278 -----------R-SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE--DQGRLTRVAAFPIGIDSERFIRA 343 (844)
Q Consensus 278 -----------r-~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~--~~g~~~~v~v~P~GID~~~f~~~ 343 (844)
. .-+..++..||.|...+..+++...+. .. ..+++ ...+..++.++|+|||.+.|.+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~-------~~-~~gl~~~~~~~~~ki~~I~NGid~~~~~p~ 260 (476)
T cd03791 189 LFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTP-------EF-GEGLDGLLRARAGKLSGILNGIDYDVWNPA 260 (476)
T ss_pred hhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCC-------CC-CcchHHHHHhccCCeEEEeCCCcCcccCcc
Confidence 0 122334556777777666665554320 00 00110 11234578999999999988764
Q ss_pred hcCC-----------chHHHHHHHHHHh-----CCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcC
Q 003145 344 LEIN-----------PVQVHIKELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVP 407 (844)
Q Consensus 344 ~~~~-----------~~~~~~~~lr~~~-----~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p 407 (844)
.... ........+++++ .++++|+++||+.+.||+..+++|++.+.++. +.|+++|.+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g 334 (476)
T cd03791 261 TDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLVILGSG 334 (476)
T ss_pred ccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEEEEecC
Confidence 3211 0011223456665 36789999999999999999999999987642 558877753
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCC
Q 003145 408 TRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKK 487 (844)
Q Consensus 408 ~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~ 487 (844)
+ + .+++.+.+++.+.. ..+.++.+ .+.+++..+|+.||++++||..||||++.+|||+||
T Consensus 335 ---~-~---~~~~~~~~~~~~~~--------~~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G---- 394 (476)
T cd03791 335 ---D-P---EYEEALRELAARYP--------GRVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYG---- 394 (476)
T ss_pred ---C-H---HHHHHHHHHHHhCC--------CcEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCC----
Confidence 1 2 23445555554421 13555444 457788899999999999999999999999999996
Q ss_pred ceEEEeCCCCchhhc--cC------CeEEECCCCHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 003145 488 GVLILSEFAGAAQSL--GA------GAILVNPWNITEVANAIARALNMS--PEEREKRHWHNFTHVTTHTAQEWAETFVS 557 (844)
Q Consensus 488 g~lVlSe~~G~~~~l--g~------~g~lvnP~d~~~~A~ai~~aL~m~--~~er~~r~~~~~~~v~~~~~~~W~~~fl~ 557 (844)
.|+|+|..+|..+.+ +. +|++|+|.|+++++++|.+++++. ++.+.++.++..+ ..++|..-++++++
T Consensus 395 ~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~ 472 (476)
T cd03791 395 TVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYLE 472 (476)
T ss_pred CCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--cCCChHHHHHHHHH
Confidence 799999999999988 34 899999999999999999998643 3344444444332 45888888888876
Q ss_pred HHH
Q 003145 558 ELN 560 (844)
Q Consensus 558 ~l~ 560 (844)
.++
T Consensus 473 ~y~ 475 (476)
T cd03791 473 LYR 475 (476)
T ss_pred HHh
Confidence 553
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.2e-22 Score=239.17 Aligned_cols=331 Identities=15% Similarity=0.127 Sum_probs=207.1
Q ss_pred HHHHHHHHHHHHHHHHhhC-CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecC-----------CCChh-hhhcC-C
Q 003145 211 FAAYIKANQMFADVVNKHY-KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTP-----------FPSSE-IHRTL-P 276 (844)
Q Consensus 211 ~~~Y~~vN~~fa~~i~~~~-~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~P-----------fp~~e-~~r~l-p 276 (844)
|..-.+++...++.+.... ..+|+|+-|++.--+++..|+++. ++|.+++.|.- |...+ .++.. .
T Consensus 387 ~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r 465 (815)
T PLN00142 387 WPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQ 465 (815)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhhhhhhc
Confidence 6666666666666664433 356999999777778888887765 79999999942 11111 01100 0
Q ss_pred ccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCc-ccC-C------CceeeCCeEEEEEEEecccChhHHhhhhcCCc
Q 003145 277 SRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGF-EGT-P------EGVEDQGRLTRVAAFPIGIDSERFIRALEINP 348 (844)
Q Consensus 277 ~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~-~~~-~------~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~ 348 (844)
...+ ...|..||.|.-.|+.-....-..+..+-.. ..+ + .++... .-++.++|+|+|...|.+......
T Consensus 466 ~~aE-~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~--~~ki~VVppGvD~~~F~P~~~~~~ 542 (815)
T PLN00142 466 FTAD-LIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF--DPKFNIVSPGADMSIYFPYTEKQK 542 (815)
T ss_pred hHHH-HHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhcccccc--ccCeeEECCCCChhhcCCCChHHh
Confidence 0011 1244456665544432111000000000000 000 0 111111 227889999999999875321100
Q ss_pred --------hHHHH---HHHHHHh-----CCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCC-CC
Q 003145 349 --------VQVHI---KELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTR-TD 411 (844)
Q Consensus 349 --------~~~~~---~~lr~~~-----~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r-~~ 411 (844)
..+.. ...++.+ .++++|++|||+++.||+..+|+||.++.+..+ ++.|++||.+.. ..
T Consensus 543 rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~----~~~LVIVGgg~d~~~ 618 (815)
T PLN00142 543 RLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRE----LVNLVVVGGFIDPSK 618 (815)
T ss_pred hHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCC----CcEEEEEECCccccc
Confidence 00000 0011222 256799999999999999999999998765544 356888886411 11
Q ss_pred --hHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeC---CCCCHHHHHHHHH-hCcEEEEcCCCcCCChhHhhhhhcccC
Q 003145 412 --VPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD---RSLDFPALCALYA-VTDVALVTSLRDGMNLVSYEFVACQDL 485 (844)
Q Consensus 412 --~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~---~~v~~~el~aly~-~ADv~v~~S~~EG~~Lv~~Eama~~~~ 485 (844)
..+..+..+++.+++.+.+.. + .|.++. +..+.++++.+|+ ++|+||+||.+||||+|++||||||
T Consensus 619 s~d~ee~~el~~L~~La~~lgL~----~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~G-- 690 (815)
T PLN00142 619 SKDREEIAEIKKMHSLIEKYNLK----G--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCG-- 690 (815)
T ss_pred cccHHHHHHHHHHHHHHHHcCCC----C--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcC--
Confidence 111111223455666554421 1 255432 2455678888777 5799999999999999999999996
Q ss_pred CCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHH
Q 003145 486 KKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN---MSPEEREKRHWHNFTHV-TTHTAQEWAETFVSEL 559 (844)
Q Consensus 486 ~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l 559 (844)
.|+|+|..+|..+.+ |.+|++|+|.|++++|++|.+++. .+++.+.++.+++++++ ++|+|...++++++-.
T Consensus 691 --lPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 691 --LPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred --CCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 899999999999988 778999999999999999988753 35667777888888887 7799999999988744
|
|
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2e-22 Score=233.70 Aligned_cols=279 Identities=18% Similarity=0.214 Sum_probs=200.1
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCcc-H---HHHHhh-hcCCEEEEecHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-S---DLLRAV-LAADLVGFHTYDYARHFVSA 305 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r-~---~ll~~l-l~aDlIgf~t~~~~~~Fl~~ 305 (844)
+.|+|++|+...+.++.++-.+..++|+++.+|.-+|........++. + .+.+.+ ..+|.|...+....+.+...
T Consensus 144 kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~~~l~~~ 223 (465)
T PLN02871 144 KPDLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALGKELEAA 223 (465)
T ss_pred CCCEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHHHHHHHc
Confidence 469999998766655554433344788988888765432110011110 0 111222 25788887776655554321
Q ss_pred HHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh----CCCcEEEEEecccccCCHHHH
Q 003145 306 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF----AGRKVMLGVDRLDMIKGIPQK 381 (844)
Q Consensus 306 ~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~----~~~~vil~VdRld~~KGi~~~ 381 (844)
+. ....++.++|+|||.+.|.+.... ..++.++ +++++|+++||+.+.||+..+
T Consensus 224 -----~~----------~~~~kv~vi~nGvd~~~f~p~~~~-------~~~~~~~~~~~~~~~~i~~vGrl~~~K~~~~l 281 (465)
T PLN02871 224 -----GV----------TAANRIRVWNKGVDSESFHPRFRS-------EEMRARLSGGEPEKPLIVYVGRLGAEKNLDFL 281 (465)
T ss_pred -----CC----------CCcCeEEEeCCccCccccCCcccc-------HHHHHHhcCCCCCCeEEEEeCCCchhhhHHHH
Confidence 10 013468899999999988754221 1233333 367899999999999999999
Q ss_pred HHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCc
Q 003145 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (844)
Q Consensus 382 l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~AD 461 (844)
++|++++ |+ +.|+++|. ++.. +++++++.. .+|+ |.|.++.+++..+|+.||
T Consensus 282 i~a~~~~----~~----~~l~ivG~-----G~~~----~~l~~~~~~----------~~V~-f~G~v~~~ev~~~~~~aD 333 (465)
T PLN02871 282 KRVMERL----PG----ARLAFVGD-----GPYR----EELEKMFAG----------TPTV-FTGMLQGDELSQAYASGD 333 (465)
T ss_pred HHHHHhC----CC----cEEEEEeC-----ChHH----HHHHHHhcc----------CCeE-EeccCCHHHHHHHHHHCC
Confidence 9988753 54 45888863 3433 334444332 1366 489999999999999999
Q ss_pred EEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc-----cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHH
Q 003145 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVNPWNITEVANAIARALNMSPEEREKRH 536 (844)
Q Consensus 462 v~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l-----g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~ 536 (844)
+||+||..||||++++|||||| .|+|+|..+|..+.+ |.+|++++|.|++++|++|.++++. ++.+.++.
T Consensus 334 v~V~pS~~E~~g~~vlEAmA~G----~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~~~ 408 (465)
T PLN02871 334 VFVMPSESETLGFVVLEAMASG----VPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLAD-PELRERMG 408 (465)
T ss_pred EEEECCcccccCcHHHHHHHcC----CCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHH
Confidence 9999999999999999999996 899999999988877 3579999999999999999999985 45777788
Q ss_pred HHHHHHHHhcCHHHHHHHHHH-HHHHhHH
Q 003145 537 WHNFTHVTTHTAQEWAETFVS-ELNDTVV 564 (844)
Q Consensus 537 ~~~~~~v~~~~~~~W~~~fl~-~l~~~~~ 564 (844)
+++++++++|+|...++.++. .+..+..
T Consensus 409 ~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~ 437 (465)
T PLN02871 409 AAAREEVEKWDWRAATRKLRNEQYSAAIW 437 (465)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 888899999999999999987 4655543
|
|
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.7e-22 Score=225.31 Aligned_cols=278 Identities=14% Similarity=0.147 Sum_probs=196.8
Q ss_pred CCCEEEEeCccchhH-HHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHh-hhcCCEEEEecHHHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFL-PKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA-VLAADLVGFHTYDYARHFVSACTR 308 (844)
Q Consensus 231 ~~DiVwvHDyhl~ll-p~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~-ll~aDlIgf~t~~~~~~Fl~~~~~ 308 (844)
..|+|++|+++.... ...+-.+..++|+++..|..|+..+.... +...+.+. +-.+|.|.+.+....+.+...
T Consensus 88 ~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~--- 162 (398)
T cd03796 88 RITIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASSI--HTNKLLRFSLADVDHVICVSHTSKENTVLR--- 162 (398)
T ss_pred CCCEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhhH--HhhHHHHHhhccCCEEEEecHhHhhHHHHH---
Confidence 469999999775443 33333344568999999987653322110 11222222 346888888887655443221
Q ss_pred HhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHH
Q 003145 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388 (844)
Q Consensus 309 ~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~l 388 (844)
......++.++|+|+|.+.|.+.... ...++++|+++||+.+.||+..+++|+..+
T Consensus 163 ------------~~~~~~k~~vi~ngvd~~~f~~~~~~------------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l 218 (398)
T cd03796 163 ------------ASLDPERVSVIPNAVDSSDFTPDPSK------------RDNDKITIVVISRLVYRKGIDLLVGIIPEI 218 (398)
T ss_pred ------------hCCChhhEEEEcCccCHHHcCCCccc------------CCCCceEEEEEeccchhcCHHHHHHHHHHH
Confidence 01123578899999999988653110 124678999999999999999999999999
Q ss_pred HHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCC
Q 003145 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (844)
Q Consensus 389 l~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~ 468 (844)
.+++|++ .|+++|. ++....+ ++++.+.+. .+ .|. +.|.++.+++..+|+.||++++||.
T Consensus 219 ~~~~~~~----~l~i~G~-----g~~~~~l----~~~~~~~~l----~~--~v~-~~G~~~~~~~~~~l~~ad~~v~pS~ 278 (398)
T cd03796 219 CKKHPNV----RFIIGGD-----GPKRILL----EEMREKYNL----QD--RVE-LLGAVPHERVRDVLVQGHIFLNTSL 278 (398)
T ss_pred HhhCCCE----EEEEEeC-----CchHHHH----HHHHHHhCC----CC--eEE-EeCCCCHHHHHHHHHhCCEEEeCCh
Confidence 8888864 4877764 2333333 344443321 11 255 4799999999999999999999999
Q ss_pred CcCCChhHhhhhhcccCCCceEEEeCCCCchhhccCC-eEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHH-HHhc
Q 003145 469 RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAG-AILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VTTH 546 (844)
Q Consensus 469 ~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~lg~~-g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~-v~~~ 546 (844)
.||||++++|||||| .|+|+|..+|..+.+..+ +++++ .|.++++++|.+++.++.+ +..+..++++. .+++
T Consensus 279 ~E~~g~~~~EAma~G----~PVI~s~~gg~~e~i~~~~~~~~~-~~~~~l~~~l~~~l~~~~~-~~~~~~~~~~~~~~~f 352 (398)
T cd03796 279 TEAFCIAIVEAASCG----LLVVSTRVGGIPEVLPPDMILLAE-PDVESIVRKLEEAISILRT-GKHDPWSFHNRVKKMY 352 (398)
T ss_pred hhccCHHHHHHHHcC----CCEEECCCCCchhheeCCceeecC-CCHHHHHHHHHHHHhChhh-hhhHHHHHHHHHHhhC
Confidence 999999999999996 899999999998888433 44554 4999999999999987543 33444555554 4779
Q ss_pred CHHHHHHHHHHHHHHhH
Q 003145 547 TAQEWAETFVSELNDTV 563 (844)
Q Consensus 547 ~~~~W~~~fl~~l~~~~ 563 (844)
++..-++++++.++.+.
T Consensus 353 s~~~~~~~~~~~y~~l~ 369 (398)
T cd03796 353 SWEDVAKRTEKVYDRIL 369 (398)
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 99999999998888764
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=99.90 E-value=8e-22 Score=222.27 Aligned_cols=287 Identities=22% Similarity=0.206 Sum_probs=205.1
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhh-----hcCCccHHH-HHhhhcCCEEEEecHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIH-----RTLPSRSDL-LRAVLAADLVGFHTYDYARHFVS 304 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~-----r~lp~r~~l-l~~ll~aDlIgf~t~~~~~~Fl~ 304 (844)
..|+|++|++...+.+.++++ ..+.|+++.+|..+|..... ........+ ...+..+|.|...+....+.+.+
T Consensus 83 ~~divh~~~~~~~~~~~~~~~-~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~ 161 (388)
T TIGR02149 83 DADVVHSHTWYTFLAGHLAKK-LYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDILK 161 (388)
T ss_pred CCCeEeecchhhhhHHHHHHH-hcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHHH
Confidence 479999999887766665544 45788999999866532110 000111111 22344678888877765555433
Q ss_pred HHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccccCCHHHH
Q 003145 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQK 381 (844)
Q Consensus 305 ~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~ 381 (844)
. .-+ -...++.++|+|+|++.|.+.. ...++.++ .++++|+++||+.+.||+..+
T Consensus 162 ~---~~~-----------~~~~~i~vi~ng~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~~~l 219 (388)
T TIGR02149 162 Y---YPD-----------LDPEKVHVIYNGIDTKEYKPDD--------GNVVLDRYGIDRSRPYILFVGRITRQKGVPHL 219 (388)
T ss_pred H---cCC-----------CCcceEEEecCCCChhhcCCCc--------hHHHHHHhCCCCCceEEEEEcccccccCHHHH
Confidence 1 001 1234788999999998876421 11234444 356799999999999999999
Q ss_pred HHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCc
Q 003145 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (844)
Q Consensus 382 l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~AD 461 (844)
++|++++. ++ +.|+++|.+. +.+ ++.+++++++..++... ..++++.+.++.+++..+|+.||
T Consensus 220 i~a~~~l~---~~----~~l~i~g~g~--~~~---~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~aD 282 (388)
T TIGR02149 220 LDAVHYIP---KD----VQVVLCAGAP--DTP---EVAEEVRQAVALLDRNR-----TGIIWINKMLPKEELVELLSNAE 282 (388)
T ss_pred HHHHHHHh---hc----CcEEEEeCCC--CcH---HHHHHHHHHHHHhcccc-----CceEEecCCCCHHHHHHHHHhCC
Confidence 99999873 23 3466665432 112 33445555554443221 13777788999999999999999
Q ss_pred EEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCH------HHHHHHHHHHhcCCHHHHH
Q 003145 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNI------TEVANAIARALNMSPEERE 533 (844)
Q Consensus 462 v~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~------~~~A~ai~~aL~m~~~er~ 533 (844)
++|+||..||||++++|||+|| .|+|+|..+|..+.+ +.+|++++|.|. ++++++|.++++. ++++.
T Consensus 283 v~v~ps~~e~~g~~~lEA~a~G----~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~-~~~~~ 357 (388)
T TIGR02149 283 VFVCPSIYEPLGIVNLEAMACG----TPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLAD-PELAK 357 (388)
T ss_pred EEEeCCccCCCChHHHHHHHcC----CCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhC-HHHHH
Confidence 9999999999999999999996 899999999988887 567999999998 9999999999985 55777
Q ss_pred HHHHHHHHHH-HhcCHHHHHHHHHHHHHHh
Q 003145 534 KRHWHNFTHV-TTHTAQEWAETFVSELNDT 562 (844)
Q Consensus 534 ~r~~~~~~~v-~~~~~~~W~~~fl~~l~~~ 562 (844)
++..++++.+ ++++|+.+++++++.++++
T Consensus 358 ~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~ 387 (388)
T TIGR02149 358 KMGIAGRKRAEEEFSWGSIAKKTVEMYRKV 387 (388)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 7777787776 6799999999998877653
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-21 Score=220.71 Aligned_cols=295 Identities=20% Similarity=0.228 Sum_probs=207.3
Q ss_pred HHHHhhCCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcC-----C-ccHHH-HHhhhcCCEEEEec
Q 003145 223 DVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTL-----P-SRSDL-LRAVLAADLVGFHT 295 (844)
Q Consensus 223 ~~i~~~~~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~l-----p-~r~~l-l~~ll~aDlIgf~t 295 (844)
..+.+.....|+|++|++....++..+.+. .++|+.++.|............ + .+..+ ...+..+|.|.+.+
T Consensus 93 ~~~~~~~~~~Div~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s 171 (398)
T cd03800 93 RFLRREGGRPDLIHAHYWDSGLVALLLARR-LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIAST 171 (398)
T ss_pred HHHHhcCCCccEEEEecCccchHHHHHHhh-cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcC
Confidence 334443336799999998777766666544 4788888899754321100000 0 01111 22345789999888
Q ss_pred HHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEeccccc
Q 003145 296 YDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMI 375 (844)
Q Consensus 296 ~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~ 375 (844)
......+... . .....++.++|+|+|.+.|.+..... .....+. ...++++|+++||+++.
T Consensus 172 ~~~~~~~~~~----~-----------~~~~~~~~vi~ng~~~~~~~~~~~~~---~~~~~~~-~~~~~~~i~~~gr~~~~ 232 (398)
T cd03800 172 PQEAEELYSL----Y-----------GAYPRRIRVVPPGVDLERFTPYGRAE---ARRARLL-RDPDKPRILAVGRLDPR 232 (398)
T ss_pred HHHHHHHHHH----c-----------cccccccEEECCCCCccceecccchh---hHHHhhc-cCCCCcEEEEEcccccc
Confidence 7665554331 1 11223488999999998876532111 1111111 11467899999999999
Q ss_pred CCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHH
Q 003145 376 KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCA 455 (844)
Q Consensus 376 KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~a 455 (844)
||+..+++|+..+.++.|++ .|+++|.+.....+ ....++++++.+.+.. ..+. +.|.++.+++..
T Consensus 233 k~~~~ll~a~~~l~~~~~~~----~l~i~G~~~~~~~~---~~~~~~~~~~~~~~~~------~~v~-~~g~~~~~~~~~ 298 (398)
T cd03800 233 KGIDTLIRAYAELPELRERA----NLVIVGGPRDDILA---MDEEELRELARELGVI------DRVD-FPGRVSREDLPA 298 (398)
T ss_pred cCHHHHHHHHHHHHHhCCCe----EEEEEECCCCcchh---hhhHHHHHHHHhcCCC------ceEE-EeccCCHHHHHH
Confidence 99999999999998877664 58888764432211 2223345555443321 1244 589999999999
Q ss_pred HHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHH
Q 003145 456 LYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEERE 533 (844)
Q Consensus 456 ly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~ 533 (844)
+|+.||++++||..||||++++|||||| .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.+++++ ++++.
T Consensus 299 ~~~~adi~l~ps~~e~~~~~l~Ea~a~G----~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~-~~~~~ 373 (398)
T cd03800 299 LYRAADVFVNPALYEPFGLTALEAMACG----LPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTD-PALRR 373 (398)
T ss_pred HHHhCCEEEecccccccCcHHHHHHhcC----CCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhC-HHHHH
Confidence 9999999999999999999999999996 799999999988888 4579999999999999999999986 45777
Q ss_pred HHHHHHHHHH-HhcCHHHHHHHHH
Q 003145 534 KRHWHNFTHV-TTHTAQEWAETFV 556 (844)
Q Consensus 534 ~r~~~~~~~v-~~~~~~~W~~~fl 556 (844)
++..++++++ +.++++..++.++
T Consensus 374 ~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 374 RLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHh
Confidence 7778888887 8899999998875
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.4e-23 Score=221.40 Aligned_cols=201 Identities=16% Similarity=0.231 Sum_probs=136.3
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc--eEEee
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAE 667 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l--~liae 667 (844)
..|+|++|+||||++. +..++++++++|+++.+ +|..|+|+|||+...+.+++..+++ ++|++
T Consensus 2 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~~~~-~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~ 66 (264)
T COG0561 2 MIKLLAFDLDGTLLDS--------------NKTISPETKEALARLRE-KGVKVVLATGRPLPDVLSILEELGLDGPLITF 66 (264)
T ss_pred CeeEEEEcCCCCccCC--------------CCccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCCCccEEEe
Confidence 4689999999999987 34599999999999987 6999999999999999999999954 69999
Q ss_pred cceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhc--CCCceEeeccce------------EE-----EEeecC---
Q 003145 668 NGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTER--TPRSHFEQRETS------------LV-----WNYKYA--- 725 (844)
Q Consensus 668 nG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~r--t~gs~iE~k~~s------------l~-----~hy~~~--- 725 (844)
||+++...++. +.....+ .+.+..+++..... .+..+....... .. +.....
T Consensus 67 NGa~i~~~~~~---i~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (264)
T COG0561 67 NGALIYNGGEL---LFQKPLS---REDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAEL 140 (264)
T ss_pred CCeEEecCCcE---EeeecCC---HHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhc
Confidence 99999975322 2222334 34455555444222 111111110000 00 000000
Q ss_pred Ch------hhhHHHHHHHHHHHhcCCCCCCCeEEEEcCc-EEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEee
Q 003145 726 DV------EFGRIQARDMLQHLWTGPISNASVEVVQGSK-SVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 798 (844)
Q Consensus 726 d~------e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~-~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD 798 (844)
+. +.......++.+.+ ...+....+.+.++.. ++||.|+|+|||.|++.|+++++ ++.++||||||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lg------i~~~~v~afGD 213 (264)
T COG0561 141 EDNKIIALDKDHEILEELVEAL-RKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLG------IKLEEVIAFGD 213 (264)
T ss_pred CcceEEEEecChHhHHHHHHHH-hhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHhC------CCHHHeEEeCC
Confidence 00 00011223333444 3333333455666544 49999999999999999999999 77899999999
Q ss_pred CCCch--hhc--cCcEEEeCCCCcc
Q 003145 799 FLGKV--LLT--QFLIQVGSSINSL 819 (844)
Q Consensus 799 ~~~nD--Mf~--g~~Iavgna~~~~ 819 (844)
+.|| ||+ |++|+||||.+++
T Consensus 214 -~~ND~~Ml~~ag~gvam~Na~~~~ 237 (264)
T COG0561 214 -STNDIEMLEVAGLGVAMGNADEEL 237 (264)
T ss_pred -ccccHHHHHhcCeeeeccCCCHHH
Confidence 9999 999 9999999996643
|
|
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.7e-22 Score=231.98 Aligned_cols=283 Identities=20% Similarity=0.172 Sum_probs=198.7
Q ss_pred HHhhCCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCCh---hhhhc---CCccHH--------HHH-hhhcCC
Q 003145 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS---EIHRT---LPSRSD--------LLR-AVLAAD 289 (844)
Q Consensus 225 i~~~~~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~---e~~r~---lp~r~~--------ll~-~ll~aD 289 (844)
+...+.+.|+|++|......++..+..+..+.|+.++.|--++.. +++.. .+..+. +.+ .+..||
T Consensus 167 l~~~~~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad 246 (475)
T cd03813 167 IARPLPKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAAD 246 (475)
T ss_pred hccCCCCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCC
Confidence 444456789999998665555555544456899999999765532 22211 000011 111 123466
Q ss_pred EEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEE
Q 003145 290 LVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGV 369 (844)
Q Consensus 290 lIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~V 369 (844)
.|...+....+... .++....++.++|+|||.+.|.+.... ....++++|+++
T Consensus 247 ~Ii~~s~~~~~~~~----------------~~g~~~~ki~vIpNgid~~~f~~~~~~-----------~~~~~~~~i~~v 299 (475)
T cd03813 247 RITTLYEGNRERQI----------------EDGADPEKIRVIPNGIDPERFAPARRA-----------RPEKEPPVVGLI 299 (475)
T ss_pred EEEecCHHHHHHHH----------------HcCCCHHHeEEeCCCcCHHHcCCcccc-----------ccCCCCcEEEEE
Confidence 66655443222111 112233578899999999988653210 112467899999
Q ss_pred ecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCC
Q 003145 370 DRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLD 449 (844)
Q Consensus 370 dRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~ 449 (844)
||+.+.||+..+|+|++.+.++.|++ .|+++|.+. .+ + ++.+++++++++.+.. ..|.| .|
T Consensus 300 Grl~~~Kg~~~li~a~~~l~~~~p~~----~l~IvG~g~-~~-~---~~~~e~~~li~~l~l~------~~V~f-~G--- 360 (475)
T cd03813 300 GRVVPIKDIKTFIRAAAIVRKKIPDA----EGWVIGPTD-ED-P---EYAEECRELVESLGLE------DNVKF-TG--- 360 (475)
T ss_pred eccccccCHHHHHHHHHHHHHhCCCe----EEEEECCCC-cC-h---HHHHHHHHHHHHhCCC------CeEEE-cC---
Confidence 99999999999999999998888864 488776432 11 2 3445666666665532 13554 66
Q ss_pred HHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhccC--------CeEEECCCCHHHHHHHH
Q 003145 450 FPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGA--------GAILVNPWNITEVANAI 521 (844)
Q Consensus 450 ~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~lg~--------~g~lvnP~d~~~~A~ai 521 (844)
.+++..+|+.||++|+||..||||++++|||||| .|+|+|+.+|+.+.+.. +|++++|.|++++|++|
T Consensus 361 ~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G----~PVVatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai 436 (475)
T cd03813 361 FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAG----IPVVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAI 436 (475)
T ss_pred CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcC----CCEEECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHHH
Confidence 6789999999999999999999999999999996 79999999998887733 79999999999999999
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHH
Q 003145 522 ARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETFVSE 558 (844)
Q Consensus 522 ~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~fl~~ 558 (844)
.+++++ ++.+.++.+++++++++ ++++..++++.+.
T Consensus 437 ~~ll~~-~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~l 473 (475)
T cd03813 437 LRLLKD-PELRRAMGEAGRKRVERYYTLERMIDSYRRL 473 (475)
T ss_pred HHHhcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 999985 45777788888888755 5878888877654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-21 Score=224.14 Aligned_cols=316 Identities=16% Similarity=0.172 Sum_probs=211.6
Q ss_pred hhhhhccccccCCCCCCcccccccchhhHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEeCcc-chhHHHHHHhcCCCCeE
Q 003145 180 GYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYH-LMFLPKCLKEYNSDMKV 258 (844)
Q Consensus 180 ~f~n~~LWp~fH~~~~~~~~~~~~~~~~~~~~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyh-l~llp~~lr~~~~~~~i 258 (844)
.+-..-+||-||.+. ......|-+++.+.+ +. |.|||---- .+-+| ++| ...+||
T Consensus 108 ~~~~~~~~~~~t~~~----------~~~~~~~l~~~~~~~---------~~--p~v~vDt~~~~~~~p-l~~--~~~~~v 163 (463)
T PLN02949 108 KWIEEETYPRFTMIG----------QSLGSVYLAWEALCK---------FT--PLYFFDTSGYAFTYP-LAR--LFGCKV 163 (463)
T ss_pred cccccccCCceehHH----------HHHHHHHHHHHHHHh---------cC--CCEEEeCCCcccHHH-HHH--hcCCcE
Confidence 344566688887652 123334555554433 12 357774321 12223 233 237899
Q ss_pred EEEEecCCCChhhhhcCCcc-------------------HHH-------HH--hhhcCCEEEEecHHHHHHHHHHHHHHh
Q 003145 259 GWFLHTPFPSSEIHRTLPSR-------------------SDL-------LR--AVLAADLVGFHTYDYARHFVSACTRIL 310 (844)
Q Consensus 259 ~~flH~Pfp~~e~~r~lp~r-------------------~~l-------l~--~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (844)
++.+|.|.-+.++...+-.+ +.+ +. .+-.+|.|...+.-..+++.+ ..
T Consensus 164 ~~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~----~~ 239 (463)
T PLN02949 164 VCYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEA----LW 239 (463)
T ss_pred EEEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHH----Hc
Confidence 99999987776554432100 000 11 123567776655433333321 11
Q ss_pred CcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHH
Q 003145 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (844)
Q Consensus 311 ~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~ 390 (844)
+...++.++++|+|.+.|... +. ....+++++++|||+.+.||+..+|+||.++++
T Consensus 240 ------------~~~~~i~vvyp~vd~~~~~~~---~~---------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~ 295 (463)
T PLN02949 240 ------------RIPERIKRVYPPCDTSGLQAL---PL---------ERSEDPPYIISVAQFRPEKAHALQLEAFALALE 295 (463)
T ss_pred ------------CCCCCeEEEcCCCCHHHcccC---Cc---------cccCCCCEEEEEEeeeccCCHHHHHHHHHHHHH
Confidence 112357789999998776321 10 011356789999999999999999999999887
Q ss_pred hCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCc
Q 003145 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRD 470 (844)
Q Consensus 391 ~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~E 470 (844)
+.++-..++.|+++|... . ++..++.+++++++.+.+.. + .|.| .+.++.+++.++|+.||+++.||..|
T Consensus 296 ~~~~~~~~~~LvIvG~~~-~--~~~~~~~~eL~~la~~l~L~----~--~V~f-~g~v~~~el~~ll~~a~~~v~~s~~E 365 (463)
T PLN02949 296 KLDADVPRPKLQFVGSCR-N--KEDEERLQKLKDRAKELGLD----G--DVEF-HKNVSYRDLVRLLGGAVAGLHSMIDE 365 (463)
T ss_pred hccccCCCcEEEEEeCCC-C--cccHHHHHHHHHHHHHcCCC----C--cEEE-eCCCCHHHHHHHHHhCcEEEeCCccC
Confidence 544322246698888642 1 11123344555666554321 1 2664 79999999999999999999999999
Q ss_pred CCChhHhhhhhcccCCCceEEEeCCCCchh-hc-----cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 003145 471 GMNLVSYEFVACQDLKKGVLILSEFAGAAQ-SL-----GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (844)
Q Consensus 471 G~~Lv~~Eama~~~~~~g~lVlSe~~G~~~-~l-----g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~ 544 (844)
|||++++|||||| .|+|+|..+|..+ .+ |.+|++++ |++++|++|.++++++++++.++.+++++.++
T Consensus 366 ~FGivvlEAMA~G----~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~ 439 (463)
T PLN02949 366 HFGISVVEYMAAG----AVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRMRETERLEIAAAARKRAN 439 (463)
T ss_pred CCChHHHHHHHcC----CcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 9999999999995 7899999888753 33 34688874 99999999999999888888888899999999
Q ss_pred hcCHHHHHHHHHHHHHHhH
Q 003145 545 THTAQEWAETFVSELNDTV 563 (844)
Q Consensus 545 ~~~~~~W~~~fl~~l~~~~ 563 (844)
+|+++.-++++++.++...
T Consensus 440 ~FS~e~~~~~~~~~i~~l~ 458 (463)
T PLN02949 440 RFSEQRFNEDFKDAIRPIL 458 (463)
T ss_pred HcCHHHHHHHHHHHHHHHH
Confidence 9999999999988887654
|
|
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-21 Score=218.49 Aligned_cols=231 Identities=16% Similarity=0.175 Sum_probs=173.0
Q ss_pred CCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh--CCCcE
Q 003145 288 ADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKV 365 (844)
Q Consensus 288 aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~v 365 (844)
+|.+...+....+.+.. .++ ....++.++|+|||.+.|.+..... ....+..+ .++.+
T Consensus 137 ~~~~i~vs~~~~~~~~~----~~~-----------~~~~~~~vi~ngvd~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 196 (374)
T TIGR03088 137 IHHYVAVSRDLEDWLRG----PVK-----------VPPAKIHQIYNGVDTERFHPSRGDR-----SPILPPDFFADESVV 196 (374)
T ss_pred CCeEEEeCHHHHHHHHH----hcC-----------CChhhEEEeccCccccccCCCccch-----hhhhHhhcCCCCCeE
Confidence 57777777655554432 111 1235678899999998886432111 11112222 35779
Q ss_pred EEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeC
Q 003145 366 MLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD 445 (844)
Q Consensus 366 il~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~ 445 (844)
|+++||+++.||+..+++|+..++++.|+...++.|+++|. ++..+ ++++++.+.+. ...++|.
T Consensus 197 i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~-----g~~~~----~~~~~~~~~~~-------~~~v~~~ 260 (374)
T TIGR03088 197 VGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGD-----GPARG----ACEQMVRAAGL-------AHLVWLP 260 (374)
T ss_pred EEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecC-----CchHH----HHHHHHHHcCC-------cceEEEc
Confidence 99999999999999999999999999887655688998874 23222 33344433322 2344456
Q ss_pred CCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHH
Q 003145 446 RSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIAR 523 (844)
Q Consensus 446 ~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~ 523 (844)
|. .+++..+|+.||++|+||..||||++++|||||| .|+|+|+.+|..+.+ |.+|++++|.|++++|++|.+
T Consensus 261 g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G----~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~ 334 (374)
T TIGR03088 261 GE--RDDVPALMQALDLFVLPSLAEGISNTILEAMASG----LPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQP 334 (374)
T ss_pred CC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHcC----CCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHH
Confidence 64 5789999999999999999999999999999996 899999999999888 567999999999999999999
Q ss_pred HhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHH
Q 003145 524 ALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELND 561 (844)
Q Consensus 524 aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~ 561 (844)
++++ ++.+.++.+++++++ +.|++...++++++.++.
T Consensus 335 l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 335 YVSD-PAARRAHGAAGRARAEQQFSINAMVAAYAGLYDQ 372 (374)
T ss_pred HHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 9985 456777778888886 689999999988877664
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.4e-22 Score=225.36 Aligned_cols=274 Identities=18% Similarity=0.184 Sum_probs=186.0
Q ss_pred CCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcC-------------CccH--HH-----------H--H
Q 003145 232 GDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTL-------------PSRS--DL-----------L--R 283 (844)
Q Consensus 232 ~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~l-------------p~r~--~l-----------l--~ 283 (844)
+|+|..|--+...+ .+.+..+++|+++.+|.|.-+++.+..+ ..+. .+ + .
T Consensus 108 pDv~i~~~g~~~~~--~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~~~~~ 185 (419)
T cd03806 108 PDIFIDTMGYPFTY--PLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAFLYGL 185 (419)
T ss_pred CCEEEEcCCcccHH--HHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHHHHHH
Confidence 58665553233323 3444556889999999664455554322 1111 01 1 1
Q ss_pred hhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCC
Q 003145 284 AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGR 363 (844)
Q Consensus 284 ~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~ 363 (844)
.+-.||.|...+.....++.+ .. +...++.++|+|+|.+.|.+... ....++
T Consensus 186 ~~~~aD~ii~~S~~~~~~~~~----~~------------~~~~~~~vi~~gvd~~~~~~~~~------------~~~~~~ 237 (419)
T cd03806 186 AGSFADVVMVNSTWTRNHIRS----LW------------KRNTKPSIVYPPCDVEELLKLPL------------DEKTRE 237 (419)
T ss_pred HhhcCCEEEECCHHHHHHHHH----Hh------------CcCCCcEEEcCCCCHHHhccccc------------ccccCC
Confidence 233577777666533333322 11 11136789999999988754211 011356
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHHhCcCCC-CceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEE
Q 003145 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 442 (844)
Q Consensus 364 ~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~-~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~ 442 (844)
++|+++||+.+.||+..+|+||..+.+..|+.. .++.|+++|.+.... ..++.+++++++.+.+.. ..|+
T Consensus 238 ~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~---~~~~~~~L~~~~~~l~l~------~~V~ 308 (419)
T cd03806 238 NQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNED---DEKRVEDLKLLAKELGLE------DKVE 308 (419)
T ss_pred cEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcc---cHHHHHHHHHHHHHhCCC------CeEE
Confidence 799999999999999999999999998887521 247788887532111 123445666666654431 1255
Q ss_pred EeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchh-hc-----cCCeEEECCCCHHH
Q 003145 443 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ-SL-----GAGAILVNPWNITE 516 (844)
Q Consensus 443 ~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~-~l-----g~~g~lvnP~d~~~ 516 (844)
|.+.++.+++..+|+.||++++||..||||++++|||||| .|+|+|..+|..+ .+ |.+|++++ |+++
T Consensus 309 -f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G----~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~ 381 (419)
T cd03806 309 -FVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAG----LIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEE 381 (419)
T ss_pred -EecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcC----CcEEEEcCCCCchheeeccCCCCceEEeC--CHHH
Confidence 5789999999999999999999999999999999999996 7899998878654 34 45799974 9999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHH
Q 003145 517 VANAIARALNMSPEEREKRHWHNFTHVTTHTAQEW 551 (844)
Q Consensus 517 ~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W 551 (844)
+|++|.++++++++++..+.++.++..++|++...
T Consensus 382 la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~~f 416 (419)
T cd03806 382 YAEAIEKILSLSEEERLRIRRAARSSVKRFSDEEF 416 (419)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHHHh
Confidence 99999999999877766655555555677777654
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-22 Score=218.38 Aligned_cols=217 Identities=15% Similarity=0.175 Sum_probs=141.6
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC--ceEEeec
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--l~liaen 668 (844)
.|||++|+||||++. +..++++++++|++|.+ .|+.|+|+|||++..+.+++..++ .++|+.|
T Consensus 2 ~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 66 (272)
T PRK15126 2 ARLAAFDMDGTLLMP--------------DHHLGEKTLSTLARLRE-RDITLTFATGRHVLEMQHILGALSLDAYLITGN 66 (272)
T ss_pred ccEEEEeCCCcCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHcCCCCcEEecC
Confidence 589999999999976 35689999999999988 699999999999999999998884 4689999
Q ss_pred ceEEEe-cCCe-eeecccccCChHHHHHHHHHHHHHHhcC--------CCceEeeccce-------EEEEeecCCh----
Q 003145 669 GMFLRC-TTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERT--------PRSHFEQRETS-------LVWNYKYADV---- 727 (844)
Q Consensus 669 G~~i~~-~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~rt--------~gs~iE~k~~s-------l~~hy~~~d~---- 727 (844)
|+.+.. .++. +.. ..+. +.+.++++...... .+.+....... ..+.+...+.
T Consensus 67 Ga~I~~~~~~~l~~~----~i~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (272)
T PRK15126 67 GTRVHSLEGELLHRQ----DLPA---DVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLP 139 (272)
T ss_pred CcEEEcCCCCEEEee----cCCH---HHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHcc
Confidence 999985 3332 222 2332 33444443322110 01111000000 0000000000
Q ss_pred --h------h-hHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEe
Q 003145 728 --E------F-GRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797 (844)
Q Consensus 728 --e------~-~~~qa~el~~~L~~~~~~~~~~~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiG 797 (844)
. + ......++.+.+ ...+. ..+.+. ++..++||.|+++|||.|++.|++++| ++.++++|||
T Consensus 140 ~~~~~ki~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~g------i~~~~v~afG 211 (272)
T PRK15126 140 AHGVTKICFCGDHDDLTRLQIQL-NEALG-ERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLG------LSLADCMAFG 211 (272)
T ss_pred ccCceEEEEECCHHHHHHHHHHH-HHHhc-CCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhC------CCHHHeEEec
Confidence 0 0 011123333444 22222 234544 456799999999999999999999999 8899999999
Q ss_pred eCCCch--hhc--cCcEEEeCCCCcchhh-----hcCCH--HHHHHHHHHHh
Q 003145 798 HFLGKV--LLT--QFLIQVGSSINSLSKE-----KKRKV--HQLFGIFLRFS 838 (844)
Q Consensus 798 D~~~nD--Mf~--g~~Iavgna~~~~a~~-----~l~~~--~~v~~~l~~~~ 838 (844)
| +.|| ||+ ++|||||||.+++.+. ...+. +-|..+|+++.
T Consensus 212 D-~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~ 262 (272)
T PRK15126 212 D-AMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWL 262 (272)
T ss_pred C-CHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHh
Confidence 9 9999 999 9999999998876443 22232 23666776654
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.6e-23 Score=210.50 Aligned_cols=194 Identities=22% Similarity=0.361 Sum_probs=146.7
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCceEEeecceEE
Q 003145 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFL 672 (844)
Q Consensus 593 Li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~liaenG~~i 672 (844)
||++|+||||++.. ..+++++++++|++|+++ |+.|+|+|||+...+..+++.++.++|++||+++
T Consensus 1 li~~D~DgTL~~~~-------------~~~~~~~~~~~l~~l~~~-g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i 66 (204)
T TIGR01484 1 LLFFDLDGTLLDPN-------------AHELSPETIEALERLREA-GVKVVLVTGRSLAEIKELLKQLPLPLIAENGALI 66 (204)
T ss_pred CEEEeCcCCCcCCC-------------CCcCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEE
Confidence 68999999999862 245889999999999985 7999999999999999999988889999999999
Q ss_pred EecCC-eeeecccccCChHH---HHHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHHHHHHHHhcCCCC-
Q 003145 673 RCTTG-KWMTTMPEHLNMEW---VDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPIS- 747 (844)
Q Consensus 673 ~~~~~-~w~~~~~~~~~~~w---~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~- 747 (844)
+..++ .|.. +......| .+.+..+++.+....++..+|.+...+.++|+.... ......++...+ +....
T Consensus 67 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~ 141 (204)
T TIGR01484 67 FYPGEILYIE--PSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGAEL--GQELDSKMRERL-EKIGRN 141 (204)
T ss_pred EECCEEEEEc--ccccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEeccch--hhHHHHHHHHHH-Hhhccc
Confidence 86433 3442 11111112 233344555566677888888899999999987511 111223444444 33221
Q ss_pred CCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEE
Q 003145 748 NASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQV 812 (844)
Q Consensus 748 ~~~~~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iav 812 (844)
...+.++ ++..++||+|++++||.|++.++++++ ++.+++++||| +.|| ||+ +++|+|
T Consensus 142 ~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~------~~~~~~~~~GD-~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 142 DLELEAIYVGKTDLEVLPAGVDKGSALQALLKELN------GKRDEILAFGD-SGNDEEMFEVAGLAVAV 204 (204)
T ss_pred cCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhC------CCHHHEEEEcC-CHHHHHHHHHcCCceEC
Confidence 2457777 689999999999999999999999998 67899999999 9999 898 788887
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.5e-21 Score=214.93 Aligned_cols=275 Identities=16% Similarity=0.123 Sum_probs=194.5
Q ss_pred HHhhCCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCC--hhhhhcCCc--cHHHHHh-hhcCCEEEEecHHHH
Q 003145 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPS--SEIHRTLPS--RSDLLRA-VLAADLVGFHTYDYA 299 (844)
Q Consensus 225 i~~~~~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~--~e~~r~lp~--r~~ll~~-ll~aDlIgf~t~~~~ 299 (844)
+.+..+ .|+|++|+....+....+.+ ..++|+.+.+|..... .....+.++ ...+.+. +..+|.|.+.+....
T Consensus 77 ~~~~~~-~dvvh~~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~ 154 (367)
T cd05844 77 LLRRHR-PDLVHAHFGFDGVYALPLAR-RLGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFIR 154 (367)
T ss_pred HHHhhC-CCEEEeccCchHHHHHHHHH-HcCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHHH
Confidence 344444 49999997664444333333 3468888888853211 111111111 1222222 345788888776544
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHH
Q 003145 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIP 379 (844)
Q Consensus 300 ~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~ 379 (844)
+.+... + ....++.++|+|+|.+.|.+... ..++++++++||+.+.||+.
T Consensus 155 ~~~~~~-----~-----------~~~~~i~vi~~g~d~~~~~~~~~--------------~~~~~~i~~~G~~~~~K~~~ 204 (367)
T cd05844 155 DRLLAL-----G-----------FPPEKVHVHPIGVDTAKFTPATP--------------ARRPPRILFVGRFVEKKGPL 204 (367)
T ss_pred HHHHHc-----C-----------CCHHHeEEecCCCCHHhcCCCCC--------------CCCCcEEEEEEeeccccChH
Confidence 444321 1 12346889999999988764211 12467899999999999999
Q ss_pred HHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHh
Q 003145 380 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 459 (844)
Q Consensus 380 ~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ 459 (844)
.+++|+..+.+++|++ .|+++|. ++.. +++++++++.+.. ..|. +.|.++.+++..+|+.
T Consensus 205 ~li~a~~~l~~~~~~~----~l~ivG~-----g~~~----~~~~~~~~~~~~~------~~v~-~~g~~~~~~l~~~~~~ 264 (367)
T cd05844 205 LLLEAFARLARRVPEV----RLVIIGD-----GPLL----AALEALARALGLG------GRVT-FLGAQPHAEVRELMRR 264 (367)
T ss_pred HHHHHHHHHHHhCCCe----EEEEEeC-----chHH----HHHHHHHHHcCCC------CeEE-ECCCCCHHHHHHHHHh
Confidence 9999999998887764 5888863 2322 3444454443211 1254 5899999999999999
Q ss_pred CcEEEEcCC------CcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHH
Q 003145 460 TDVALVTSL------RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEE 531 (844)
Q Consensus 460 ADv~v~~S~------~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~e 531 (844)
||++++||. .||||++++|||||| .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.+++++ ++.
T Consensus 265 ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G----~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~ 339 (367)
T cd05844 265 ARIFLQPSVTAPSGDAEGLPVVLLEAQASG----VPVVATRHGGIPEAVEDGETGLLVPEGDVAALAAALGRLLAD-PDL 339 (367)
T ss_pred CCEEEECcccCCCCCccCCchHHHHHHHcC----CCEEEeCCCCchhheecCCeeEEECCCCHHHHHHHHHHHHcC-HHH
Confidence 999999997 599999999999996 899999999988877 5679999999999999999999985 446
Q ss_pred HHHHHHHHHHHH-HhcCHHHHHHHHH
Q 003145 532 REKRHWHNFTHV-TTHTAQEWAETFV 556 (844)
Q Consensus 532 r~~r~~~~~~~v-~~~~~~~W~~~fl 556 (844)
+.++..++++++ +.++|+.+++.+.
T Consensus 340 ~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 340 RARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 777777888887 6799999988765
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.7e-21 Score=211.22 Aligned_cols=281 Identities=20% Similarity=0.257 Sum_probs=198.1
Q ss_pred HhhCCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhh-hcCCEEEEecHHHHHHHHH
Q 003145 226 NKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV-LAADLVGFHTYDYARHFVS 304 (844)
Q Consensus 226 ~~~~~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~l-l~aDlIgf~t~~~~~~Fl~ 304 (844)
.+..+ .|+|++|.+|..++..+++...+..++....|...+...+ +..+.+.. ..++.+...+....+.|..
T Consensus 75 ~~~~~-pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 147 (360)
T cd04951 75 LRQFK-PDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRL------RMLAYRLTDFLSDLTTNVSKEALDYFIA 147 (360)
T ss_pred HHhcC-CCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHH------HHHHHHHHhhccCceEEEcHHHHHHHHh
Confidence 33344 5899999999888888887777778888888864322111 11111111 1234444445444444432
Q ss_pred HHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccccCCHHHH
Q 003145 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQK 381 (844)
Q Consensus 305 ~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~ 381 (844)
.. .-...++.++|+|+|...|.+.. .....+++.+ .++++++++||+.+.||+..+
T Consensus 148 ~~---------------~~~~~~~~~i~ng~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~g~~~~~kg~~~l 206 (360)
T cd04951 148 SK---------------AFNANKSFVVYNGIDTDRFRKDP------ARRLKIRNALGVKNDTFVILAVGRLVEAKDYPNL 206 (360)
T ss_pred cc---------------CCCcccEEEEccccchhhcCcch------HHHHHHHHHcCcCCCCEEEEEEeeCchhcCcHHH
Confidence 10 01234688999999998875421 1223455554 367899999999999999999
Q ss_pred HHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCc
Q 003145 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (844)
Q Consensus 382 l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~AD 461 (844)
++|+.++.+++|++ .|+++|. ++...+ +.+.+.+.+.. ..|.+ .|.. +++..+|+.||
T Consensus 207 i~a~~~l~~~~~~~----~l~i~G~-----g~~~~~----~~~~~~~~~~~------~~v~~-~g~~--~~~~~~~~~ad 264 (360)
T cd04951 207 LKAFAKLLSDYLDI----KLLIAGD-----GPLRAT----LERLIKALGLS------NRVKL-LGLR--DDIAAYYNAAD 264 (360)
T ss_pred HHHHHHHHhhCCCe----EEEEEcC-----CCcHHH----HHHHHHhcCCC------CcEEE-eccc--ccHHHHHHhhc
Confidence 99999998888764 4887764 232223 33333333321 12554 5653 68899999999
Q ss_pred EEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 003145 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 541 (844)
Q Consensus 462 v~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~ 541 (844)
++++||..||||++++|||||| .|+|+|+.+|..+.+..+|++++|.|+++++++|.++++++++.+..+..+...
T Consensus 265 ~~v~~s~~e~~~~~~~Ea~a~G----~PvI~~~~~~~~e~i~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~ 340 (360)
T cd04951 265 LFVLSSAWEGFGLVVAEAMACE----LPVVATDAGGVREVVGDSGLIVPISDPEALANKIDEILKMSGEERDIIGARRER 340 (360)
T ss_pred eEEecccccCCChHHHHHHHcC----CCEEEecCCChhhEecCCceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9999999999999999999996 799999999988888668999999999999999999998777777666665333
Q ss_pred HHHhcCHHHHHHHHHHHHH
Q 003145 542 HVTTHTAQEWAETFVSELN 560 (844)
Q Consensus 542 ~v~~~~~~~W~~~fl~~l~ 560 (844)
..+.++++.+++.+++-+.
T Consensus 341 ~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 341 IVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHhcCHHHHHHHHHHHhh
Confidence 4588999999999887653
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.6e-21 Score=217.04 Aligned_cols=289 Identities=10% Similarity=0.003 Sum_probs=189.7
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeE-EEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKV-GWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i-~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~ 309 (844)
..|+|+.|++...+++.+..... .+|+ +...|. +++...-+.+- ++ ...+..++++.-.+. ++.+.....+.+
T Consensus 280 rpDIVHt~~~~a~l~g~laA~la-gvpviv~~~h~-~~~~~~~r~~~-~e--~~~~~~a~~i~~~sd-~v~~s~~v~~~l 353 (578)
T PRK15490 280 KLDYLSVWQDGACLMIALAALIA-GVPRIQLGLRG-LPPVVRKRLFK-PE--YEPLYQALAVVPGVD-FMSNNHCVTRHY 353 (578)
T ss_pred CCCEEEEcCcccHHHHHHHHHhc-CCCEEEEeecc-cCCcchhhHHH-HH--HHHhhhhceeEecch-hhhccHHHHHHH
Confidence 45999999999877776666554 3444 555675 33211001000 00 112334444433222 332222211211
Q ss_pred hCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh-CCCcEEEEEecccccCCHHHHHHHHHHH
Q 003145 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQKLLAFEKF 388 (844)
Q Consensus 310 l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld~~KGi~~~l~Af~~l 388 (844)
.. .+.....++.++|+|||++.|.+....+ ......++..+ .+.++|++|+|+.+.||...+|+|+.++
T Consensus 354 ~~--------~lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg~~~LI~A~a~l 423 (578)
T PRK15490 354 AD--------WLKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKTQDADTTIGGVFRFVGDKNPFAWIDFAARY 423 (578)
T ss_pred HH--------HhCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhccCCCCcEEEEEEEEehhcCHHHHHHHHHHH
Confidence 10 0112346799999999999887642111 11111222223 3457888999999999999999999999
Q ss_pred HHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCC
Q 003145 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (844)
Q Consensus 389 l~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~ 468 (844)
+++.|++ .|+++|. ++.. +++++++.+.+.. ..|+| .|. .+++..+|+.||+||+||.
T Consensus 424 lk~~pdi----rLvIVGd-----G~~~----eeLk~la~elgL~------d~V~F-lG~--~~Dv~~~LaaADVfVlPS~ 481 (578)
T PRK15490 424 LQHHPAT----RFVLVGD-----GDLR----AEAQKRAEQLGIL------ERILF-VGA--SRDVGYWLQKMNVFILFSR 481 (578)
T ss_pred HhHCCCe----EEEEEeC-----chhH----HHHHHHHHHcCCC------CcEEE-CCC--hhhHHHHHHhCCEEEEccc
Confidence 9888864 4888864 3333 3444455443321 13554 666 4689999999999999999
Q ss_pred CcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHH-
Q 003145 469 RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMS--PEEREKRHWHNFTHV- 543 (844)
Q Consensus 469 ~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~--~~er~~r~~~~~~~v- 543 (844)
+||||++++|||||| .|+|+|..+|..+.+ |.+|++|+|.|++++++++..+..+. .+.+..+.+++++++
T Consensus 482 ~EGfp~vlLEAMA~G----lPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~V~ 557 (578)
T PRK15490 482 YEGLPNVLIEAQMVG----VPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYAEKLVNLWRSRTGICQQTQSFLQ 557 (578)
T ss_pred ccCccHHHHHHHHhC----CCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999996 899999999999887 78899999999999998874433221 223445667778877
Q ss_pred HhcCHHHHHHHHHHHHHH
Q 003145 544 TTHTAQEWAETFVSELND 561 (844)
Q Consensus 544 ~~~~~~~W~~~fl~~l~~ 561 (844)
+.|++..-++.+++.++.
T Consensus 558 e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 558 ERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred hhCCHHHHHHHHHHHHHh
Confidence 669999999999887764
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.9e-22 Score=214.26 Aligned_cols=219 Identities=15% Similarity=0.186 Sum_probs=140.7
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC--ceEEeec
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--l~liaen 668 (844)
.|||++|+||||++. +..++++++++|++|.+ +|+.|+|+|||+...+.+++..++ .++|++|
T Consensus 2 ikli~~DlDGTLl~~--------------~~~is~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 66 (266)
T PRK10976 2 YQVVASDLDGTLLSP--------------DHTLSPYAKETLKLLTA-RGIHFVFATGRHHVDVGQIRDNLEIKSYMITSN 66 (266)
T ss_pred ceEEEEeCCCCCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcC
Confidence 589999999999986 34689999999999997 699999999999999999988874 4689999
Q ss_pred ceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhc--------CC-CceEeeccc---------eEEEEeec---CCh
Q 003145 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTER--------TP-RSHFEQRET---------SLVWNYKY---ADV 727 (844)
Q Consensus 669 G~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~r--------t~-gs~iE~k~~---------sl~~hy~~---~d~ 727 (844)
|+++...++.. +.....+ .+.+.++++...+. .. +.++..... ...+.... ...
T Consensus 67 Ga~i~~~~~~~--i~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (266)
T PRK10976 67 GARVHDTDGNL--IFSHNLD---RDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEP 141 (266)
T ss_pred CcEEECCCCCE--ehhhcCC---HHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhccc
Confidence 99998532321 1112233 23344444433211 01 111110000 00000000 000
Q ss_pred -hh--------hHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEe
Q 003145 728 -EF--------GRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797 (844)
Q Consensus 728 -e~--------~~~qa~el~~~L~~~~~~~~~~~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiG 797 (844)
++ ......++.+.+ ...+. ..+.+. ++..++||.|+++|||.|++.|++++| +++++++|||
T Consensus 142 ~~i~ki~~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~lg------i~~~~viafG 213 (266)
T PRK10976 142 DGVSKVFFTCDSHEKLLPLEQAI-NARWG-DRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLG------YSLKDCIAFG 213 (266)
T ss_pred CCceEEEEEcCCHHHHHHHHHHH-HHHhC-CcEEEEEeCCceEEEEcCCCChHHHHHHHHHHcC------CCHHHeEEEc
Confidence 00 001112233333 22121 234543 467899999999999999999999999 7899999999
Q ss_pred eCCCch--hhc--cCcEEEeCCCCcchhh----h-cCCHH--HHHHHHHHHh
Q 003145 798 HFLGKV--LLT--QFLIQVGSSINSLSKE----K-KRKVH--QLFGIFLRFS 838 (844)
Q Consensus 798 D~~~nD--Mf~--g~~Iavgna~~~~a~~----~-l~~~~--~v~~~l~~~~ 838 (844)
| +.|| ||+ |++||||||.+++.+. . ..+.+ -|..+|+++.
T Consensus 214 D-~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~~ 264 (266)
T PRK10976 214 D-GMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKLY 264 (266)
T ss_pred C-CcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHHHHh
Confidence 9 9999 999 9999999998865443 2 23322 2556666553
|
|
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.88 E-value=1e-20 Score=213.65 Aligned_cols=283 Identities=17% Similarity=0.159 Sum_probs=189.8
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHH---------hhhcCCEEEEecHHHHH
Q 003145 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLR---------AVLAADLVGFHTYDYAR 300 (844)
Q Consensus 230 ~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~---------~ll~aDlIgf~t~~~~~ 300 (844)
...|+|++|+.... ++ +++... ..++.+.+|.| .......-.+.+.+.+ .+-.+|.|...+.....
T Consensus 93 ~~~Dvi~~~~~~~~-~~-~~~~~~-~~~~i~~~h~~--~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~ 167 (392)
T cd03805 93 EKYDVFIVDQVSAC-VP-LLKLFS-PSKILFYCHFP--DQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTAS 167 (392)
T ss_pred CCCCEEEEcCcchH-HH-HHHHhc-CCcEEEEEecC--hHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHH
Confidence 46799999886643 22 233333 38899999954 2211111111111111 13347777776654333
Q ss_pred HHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHH
Q 003145 301 HFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQ 380 (844)
Q Consensus 301 ~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~ 380 (844)
.+.. .++. .....+.++|+|||.+.|.+..... .........+..+|+++||+.+.||+..
T Consensus 168 ~~~~----~~~~----------~~~~~~~vi~n~vd~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~grl~~~Kg~~~ 228 (392)
T cd03805 168 VFKK----TFPS----------LAKNPREVVYPCVDTDSFESTSEDP-----DPGLLIPKSGKKTFLSINRFERKKNIAL 228 (392)
T ss_pred HHHH----Hhcc----------cccCCcceeCCCcCHHHcCcccccc-----cccccccCCCceEEEEEeeecccCChHH
Confidence 3322 1110 0112245889999999886532111 0011112256789999999999999999
Q ss_pred HHHHHHHHHHhC---cCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHH-hhcccCCCCcccEEEeCCCCCHHHHHHH
Q 003145 381 KLLAFEKFLEEN---SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGR-INGRFGTLTAVPIHHLDRSLDFPALCAL 456 (844)
Q Consensus 381 ~l~Af~~ll~~~---P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~-IN~~~g~~~~~pv~~~~~~v~~~el~al 456 (844)
+|+|++++.++. |+ +.|+++|.+... .++..++.+++++++.+ .+.. ..|. |.|.++.+++..+
T Consensus 229 ll~a~~~l~~~~~~~~~----~~l~i~G~~~~~-~~~~~~~~~~l~~~~~~~~~l~------~~V~-f~g~~~~~~~~~~ 296 (392)
T cd03805 229 AIEAFAILKDKLAEFKN----VRLVIAGGYDPR-VAENVEYLEELQRLAEELLLLE------DQVI-FLPSISDSQKELL 296 (392)
T ss_pred HHHHHHHHHhhcccccC----eEEEEEcCCCCC-CchhHHHHHHHHHHHHHhcCCC------ceEE-EeCCCChHHHHHH
Confidence 999999998876 54 558888754321 12222344555555554 3221 1355 4899999999999
Q ss_pred HHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHH
Q 003145 457 YAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREK 534 (844)
Q Consensus 457 y~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~ 534 (844)
|+.||++++||..||||++++|||||| .|+|+|+.+|..+.+ +.+|++++| |++++|++|.++++.+. .+.+
T Consensus 297 l~~ad~~l~~s~~E~~g~~~lEAma~G----~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~~-~~~~ 370 (392)
T cd03805 297 LSSARALLYTPSNEHFGIVPLEAMYAG----KPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDPD-LADR 370 (392)
T ss_pred HhhCeEEEECCCcCCCCchHHHHHHcC----CCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhChH-HHHH
Confidence 999999999999999999999999996 899999999988877 457999977 99999999999998764 6677
Q ss_pred HHHHHHHHH-HhcCHHHHHHH
Q 003145 535 RHWHNFTHV-TTHTAQEWAET 554 (844)
Q Consensus 535 r~~~~~~~v-~~~~~~~W~~~ 554 (844)
+.+++++++ ..++++..+++
T Consensus 371 ~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 371 MGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHHHHHHhcCHHHHhhh
Confidence 778888876 66898887765
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1e-21 Score=211.41 Aligned_cols=217 Identities=14% Similarity=0.226 Sum_probs=139.5
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc-----eE
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL-----WL 664 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l-----~l 664 (844)
+.|||++|+||||++. +..++++++++|++|.+ .|+.|+|+|||++..+.+.++.+++ ++
T Consensus 2 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~ 66 (270)
T PRK10513 2 AIKLIAIDMDGTLLLP--------------DHTISPAVKQAIAAARA-KGVNVVLTTGRPYAGVHRYLKELHMEQPGDYC 66 (270)
T ss_pred ceEEEEEecCCcCcCC--------------CCccCHHHHHHHHHHHH-CCCEEEEecCCChHHHHHHHHHhCCCCCCCeE
Confidence 3689999999999986 35689999999999988 6999999999999999999988753 58
Q ss_pred EeecceEEEe--cCCe-eeecccccCChHHHHHHHHHHHHHHhc--------CCCceEeeccce-----------EEEEe
Q 003145 665 AAENGMFLRC--TTGK-WMTTMPEHLNMEWVDSLKHVFEYFTER--------TPRSHFEQRETS-----------LVWNY 722 (844)
Q Consensus 665 iaenG~~i~~--~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~r--------t~gs~iE~k~~s-----------l~~hy 722 (844)
|++||+++.. .++. +... .+.+ .+..+++...+. ..+.+...+... +...+
T Consensus 67 I~~NGa~i~~~~~~~~i~~~~----l~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (270)
T PRK10513 67 ITNNGALVQKAADGETVAQTA----LSYD---DYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVF 139 (270)
T ss_pred EEcCCeEEEECCCCCEEEecC----CCHH---HHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccc
Confidence 9999999985 2332 3222 3322 233333322211 011111111100 00000
Q ss_pred ecC---Ch--hh------h-HHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCC
Q 003145 723 KYA---DV--EF------G-RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTA 789 (844)
Q Consensus 723 ~~~---d~--e~------~-~~qa~el~~~L~~~~~~~~~~~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~ 789 (844)
... ++ .+ . .....++.+.+ ...+. ..+.++ ++..++||.|+|+|||.|++.|++++| ++
T Consensus 140 ~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~g------i~ 211 (270)
T PRK10513 140 REVEKMDPNLQFPKVMMIDEPEILDAAIARI-PAEVK-ERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLG------IK 211 (270)
T ss_pred cchhhccccCCceEEEEeCCHHHHHHHHHHh-HHHhc-CcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhC------CC
Confidence 000 00 00 0 11122333333 21111 234544 467899999999999999999999999 78
Q ss_pred CceEEEEeeCCCch--hhc--cCcEEEeCCCCcc---hhhhcCCH--HHHHHHHHHH
Q 003145 790 IDYVLCIGHFLGKV--LLT--QFLIQVGSSINSL---SKEKKRKV--HQLFGIFLRF 837 (844)
Q Consensus 790 ~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~---a~~~l~~~--~~v~~~l~~~ 837 (844)
.++++|||| +.|| ||+ |++||||||.+++ |++...+. +-|..+|+++
T Consensus 212 ~~~v~afGD-~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~ 267 (270)
T PRK10513 212 PEEVMAIGD-QENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKY 267 (270)
T ss_pred HHHEEEECC-chhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHHHH
Confidence 999999999 9999 999 9999999998764 33333332 2355566554
|
|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.88 E-value=3e-20 Score=207.68 Aligned_cols=277 Identities=16% Similarity=0.163 Sum_probs=194.5
Q ss_pred CCCEEEEeCccchhHHHHHHhcC---CCCeEEEEEecCCCChhhhhcCCccHHH-HHhhhcCCEEEEecHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYN---SDMKVGWFLHTPFPSSEIHRTLPSRSDL-LRAVLAADLVGFHTYDYARHFVSAC 306 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~---~~~~i~~flH~Pfp~~e~~r~lp~r~~l-l~~ll~aDlIgf~t~~~~~~Fl~~~ 306 (844)
..|+|++|.+....++..+..+. .+.++.+.+|..-.. ....-+....+ ...+..+|.|...+......+.+.
T Consensus 84 ~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~- 160 (371)
T cd04962 84 KLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT--LVGQDPSFQPATRFSIEKSDGVTAVSESLRQETYEL- 160 (371)
T ss_pred CccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc--cccccccchHHHHHHHhhCCEEEEcCHHHHHHHHHh-
Confidence 46999999876555555544322 267888888853111 11111222222 334557899998888766555431
Q ss_pred HHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccccCCHHHHHH
Q 003145 307 TRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLL 383 (844)
Q Consensus 307 ~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~l~ 383 (844)
. +...++.++|+|+|...|.+... ...++++ .++++++++||+.+.||+..+++
T Consensus 161 ---~------------~~~~~i~vi~n~~~~~~~~~~~~--------~~~~~~~~~~~~~~~il~~g~l~~~K~~~~li~ 217 (371)
T cd04962 161 ---F------------DITKEIEVIPNFVDEDRFRPKPD--------EALKRRLGAPEGEKVLIHISNFRPVKRIDDVIR 217 (371)
T ss_pred ---c------------CCcCCEEEecCCcCHhhcCCCch--------HHHHHhcCCCCCCeEEEEecccccccCHHHHHH
Confidence 1 11236889999999887754211 1223333 36789999999999999999999
Q ss_pred HHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEE
Q 003145 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (844)
Q Consensus 384 Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~ 463 (844)
|+..+.++ ++ +.|+++|.+ ++...++ +++.+.+.. ..|.+ .|.. +++..+|+.||++
T Consensus 218 a~~~l~~~-~~----~~l~i~G~g-----~~~~~~~----~~~~~~~~~------~~v~~-~g~~--~~~~~~~~~~d~~ 274 (371)
T cd04962 218 IFAKVRKE-VP----ARLLLVGDG-----PERSPAE----RLARELGLQ------DDVLF-LGKQ--DHVEELLSIADLF 274 (371)
T ss_pred HHHHHHhc-CC----ceEEEEcCC-----cCHHHHH----HHHHHcCCC------ceEEE-ecCc--ccHHHHHHhcCEE
Confidence 99988654 32 447777643 2222333 333333211 12554 5654 5799999999999
Q ss_pred EEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 003145 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 541 (844)
Q Consensus 464 v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~ 541 (844)
++||..||||++++|||+|| .|+|+|+.+|..+.+ |.+|++++|.|+++++++|.+++++ ++.+.++.+++++
T Consensus 275 v~ps~~E~~~~~~~EAma~g----~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~ 349 (371)
T cd04962 275 LLPSEKESFGLAALEAMACG----VPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLED-DELWQEFSRAARN 349 (371)
T ss_pred EeCCCcCCCccHHHHHHHcC----CCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHH
Confidence 99999999999999999996 899999999998887 5689999999999999999999985 4567777777887
Q ss_pred H-HHhcCHHHHHHHHHHHHHH
Q 003145 542 H-VTTHTAQEWAETFVSELND 561 (844)
Q Consensus 542 ~-v~~~~~~~W~~~fl~~l~~ 561 (844)
. ...|++...++.+++.+++
T Consensus 350 ~~~~~fs~~~~~~~~~~~y~~ 370 (371)
T cd04962 350 RAAERFDSERIVPQYEALYRR 370 (371)
T ss_pred HHHHhCCHHHHHHHHHHHHHh
Confidence 7 5789999999988877654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-20 Score=224.96 Aligned_cols=280 Identities=14% Similarity=0.093 Sum_probs=185.6
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEE-EEecCCCC---hhhhhcCCccHHHHHhhhcCCEEEEec--HHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGW-FLHTPFPS---SEIHRTLPSRSDLLRAVLAADLVGFHT--YDYARHFVS 304 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~-flH~Pfp~---~e~~r~lp~r~~ll~~ll~aDlIgf~t--~~~~~~Fl~ 304 (844)
..|||++|.+.-.++..+..+.. .+|+.+ .+|+ +|. .+.++. ....+...+..++.+.+.+ ....+.+..
T Consensus 400 kpDIVH~h~~~a~~lg~lAa~~~-gvPvIv~t~h~-~~~~~~~~~~~~--~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~ 475 (694)
T PRK15179 400 VPSVVHIWQDGSIFACALAALLA-GVPRIVLSVRT-MPPVDRPDRYRV--EYDIIYSELLKMRGVALSSNSQFAAHRYAD 475 (694)
T ss_pred CCcEEEEeCCcHHHHHHHHHHHc-CCCEEEEEeCC-CccccchhHHHH--HHHHHHHHHHhcCCeEEEeCcHHHHHHHHH
Confidence 45999999988877777666543 456544 5564 221 121110 0111223333334333322 222222221
Q ss_pred HHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhC-CCcEEEEEecccccCCHHHHHH
Q 003145 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA-GRKVMLGVDRLDMIKGIPQKLL 383 (844)
Q Consensus 305 ~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~-~~~vil~VdRld~~KGi~~~l~ 383 (844)
.++ ....+|.++|+|||++.|.+. +...+....++.... +.++|++|||+++.||+..+|+
T Consensus 476 ----~~g-----------~~~~kI~VI~NGVd~~~f~~~---~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~ 537 (694)
T PRK15179 476 ----WLG-----------VDERRIPVVYNGLAPLKSVQD---DACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVE 537 (694)
T ss_pred ----HcC-----------CChhHEEEECCCcCHHhcCCC---chhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHH
Confidence 111 224578999999999888532 111111112222222 4668899999999999999999
Q ss_pred HHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEE
Q 003145 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (844)
Q Consensus 384 Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~ 463 (844)
||..+++++|++ .|+++|.+ +. ++++++++.+.+.. ..|+ |.|.. +++..+|+.||+|
T Consensus 538 A~a~l~~~~p~~----~LvIvG~G-----~~----~~~L~~l~~~lgL~------~~V~-flG~~--~dv~~ll~aaDv~ 595 (694)
T PRK15179 538 AAQRFAASHPKV----RFIMVGGG-----PL----LESVREFAQRLGMG------ERIL-FTGLS--RRVGYWLTQFNAF 595 (694)
T ss_pred HHHHHHHHCcCe----EEEEEccC-----cc----hHHHHHHHHHcCCC------CcEE-EcCCc--chHHHHHHhcCEE
Confidence 999999998875 48888742 32 23455555554321 1254 57775 4799999999999
Q ss_pred EEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCH--HHHHHHHHHHhcCCHHHHHHHHHHH
Q 003145 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNI--TEVANAIARALNMSPEEREKRHWHN 539 (844)
Q Consensus 464 v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~--~~~A~ai~~aL~m~~~er~~r~~~~ 539 (844)
|+||.+||||++++|||||| .|+|+|..+|..+.+ |.+|++|+|.|. ++++++|.+++.... ....+.+++
T Consensus 596 VlpS~~Egfp~vlLEAMA~G----~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~-~~~~l~~~a 670 (694)
T PRK15179 596 LLLSRFEGLPNVLIEAQFSG----VPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCA-ADPGIARKA 670 (694)
T ss_pred EeccccccchHHHHHHHHcC----CeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChh-ccHHHHHHH
Confidence 99999999999999999996 899999999988888 568999998875 689999999887543 223445567
Q ss_pred HHHH-HhcCHHHHHHHHHHHH
Q 003145 540 FTHV-TTHTAQEWAETFVSEL 559 (844)
Q Consensus 540 ~~~v-~~~~~~~W~~~fl~~l 559 (844)
++++ ++|++..-++.+++.+
T Consensus 671 r~~a~~~FS~~~~~~~~~~lY 691 (694)
T PRK15179 671 ADWASARFSLNQMIASTVRCY 691 (694)
T ss_pred HHHHHHhCCHHHHHHHHHHHh
Confidence 7776 5899999888887654
|
|
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.2e-20 Score=213.17 Aligned_cols=285 Identities=15% Similarity=0.125 Sum_probs=198.2
Q ss_pred CCCCEEEEeCccchhH--HHHHHhcCCCCeEEEEEecCCCChhhhhc-CC--cc----HHHHHh-hhcCCEEEEecHHHH
Q 003145 230 KDGDVVWCHDYHLMFL--PKCLKEYNSDMKVGWFLHTPFPSSEIHRT-LP--SR----SDLLRA-VLAADLVGFHTYDYA 299 (844)
Q Consensus 230 ~~~DiVwvHDyhl~ll--p~~lr~~~~~~~i~~flH~Pfp~~e~~r~-lp--~r----~~ll~~-ll~aDlIgf~t~~~~ 299 (844)
.+.|+||+|...+... ...+++ ..+.|+.+..|--||..-.-.. .+ .. ..+.+. +-.+|.|...+....
T Consensus 105 ~~~Div~~~~p~~~~~~~~~~~~~-~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~ 183 (412)
T PRK10307 105 WRPDRVIGVVPTLFCAPGARLLAR-LSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMM 183 (412)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHH-hhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHH
Confidence 3569999998665432 223333 3456777777765553211001 10 00 111222 235888888887666
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccccC
Q 003145 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIK 376 (844)
Q Consensus 300 ~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~K 376 (844)
+.+.. .+ ....++.++|+|||.+.|.+... + ....+++++ .++++|+++||+.+.|
T Consensus 184 ~~~~~-----~~-----------~~~~~i~vi~ngvd~~~~~~~~~-~----~~~~~~~~~~~~~~~~~i~~~G~l~~~k 242 (412)
T PRK10307 184 NKARE-----KG-----------VAAEKVIFFPNWSEVARFQPVAD-A----DVDALRAQLGLPDGKKIVLYSGNIGEKQ 242 (412)
T ss_pred HHHHH-----cC-----------CCcccEEEECCCcCHhhcCCCCc-c----chHHHHHHcCCCCCCEEEEEcCcccccc
Confidence 55432 11 12357889999999998865321 1 122355555 3568999999999999
Q ss_pred CHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHH
Q 003145 377 GIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCAL 456 (844)
Q Consensus 377 Gi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~al 456 (844)
|+..+++|++++ +++|+ +.|+++|. ++.. +++++++.+.+. ..|.| .|.++.+++..+
T Consensus 243 g~~~li~a~~~l-~~~~~----~~l~ivG~-----g~~~----~~l~~~~~~~~l-------~~v~f-~G~~~~~~~~~~ 300 (412)
T PRK10307 243 GLELVIDAARRL-RDRPD----LIFVICGQ-----GGGK----ARLEKMAQCRGL-------PNVHF-LPLQPYDRLPAL 300 (412)
T ss_pred CHHHHHHHHHHh-ccCCC----eEEEEECC-----ChhH----HHHHHHHHHcCC-------CceEE-eCCCCHHHHHHH
Confidence 999999999876 44554 56887863 3333 334444443332 13664 789999999999
Q ss_pred HHhCcEEEEcCCCcCCCh----hHhhhhhcccCCCceEEEeCCCCc--hhhccCCeEEECCCCHHHHHHHHHHHhcCCHH
Q 003145 457 YAVTDVALVTSLRDGMNL----VSYEFVACQDLKKGVLILSEFAGA--AQSLGAGAILVNPWNITEVANAIARALNMSPE 530 (844)
Q Consensus 457 y~~ADv~v~~S~~EG~~L----v~~Eama~~~~~~g~lVlSe~~G~--~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~ 530 (844)
|+.||++++||..|++++ ..+|||||| .|+|+|..+|. .+.+..+|++++|.|++++|++|.++++++ +
T Consensus 301 ~~~aDi~v~ps~~e~~~~~~p~kl~eama~G----~PVi~s~~~g~~~~~~i~~~G~~~~~~d~~~la~~i~~l~~~~-~ 375 (412)
T PRK10307 301 LKMADCHLLPQKAGAADLVLPSKLTNMLASG----RNVVATAEPGTELGQLVEGIGVCVEPESVEALVAAIAALARQA-L 375 (412)
T ss_pred HHhcCEeEEeeccCcccccCcHHHHHHHHcC----CCEEEEeCCCchHHHHHhCCcEEeCCCCHHHHHHHHHHHHhCH-H
Confidence 999999999999999554 469999996 78999988774 355556899999999999999999998764 5
Q ss_pred HHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHhH
Q 003145 531 EREKRHWHNFTHVT-THTAQEWAETFVSELNDTV 563 (844)
Q Consensus 531 er~~r~~~~~~~v~-~~~~~~W~~~fl~~l~~~~ 563 (844)
++..+.+++++++. .||+...+++|++.+++..
T Consensus 376 ~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~ 409 (412)
T PRK10307 376 LRPKLGTVAREYAERTLDKENVLRQFIADIRGLV 409 (412)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 77788888888875 6999999999999888654
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.3e-21 Score=203.58 Aligned_cols=188 Identities=13% Similarity=0.209 Sum_probs=128.6
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC--ceEEeec
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--l~liaen 668 (844)
.|+|++|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+.+++..++ .++|++|
T Consensus 3 ~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~n 67 (230)
T PRK01158 3 IKAIAIDIDGTITDK--------------DRRLSLKAVEAIRKAEK-LGIPVILATGNVLCFARAAAKLIGTSGPVIAEN 67 (230)
T ss_pred eeEEEEecCCCcCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCcEEEec
Confidence 589999999999976 34589999999999997 699999999999999998888874 4699999
Q ss_pred ceEEEec--CCe-eeecccccCChHHHHHHHHHHHHHHhcCCCc--eEeec--cc--eEEEEeecCChhhhHHHHHHHHH
Q 003145 669 GMFLRCT--TGK-WMTTMPEHLNMEWVDSLKHVFEYFTERTPRS--HFEQR--ET--SLVWNYKYADVEFGRIQARDMLQ 739 (844)
Q Consensus 669 G~~i~~~--~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs--~iE~k--~~--sl~~hy~~~d~e~~~~qa~el~~ 739 (844)
|+++... +.. +... .+ .+.++++...+..+.. .+... .. .....+...+ . .++.+
T Consensus 68 Ga~i~~~~~~~~~~~~~----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~ 131 (230)
T PRK01158 68 GGVISVGFDGKRIFLGD----IE-----ECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRRTVP----V---EEVRE 131 (230)
T ss_pred CeEEEEcCCCCEEEEcc----hH-----HHHHHHHHHHHhccccceeeecCCcccccceeeeccccc----H---HHHHH
Confidence 9998753 222 2211 11 1223333222221111 11100 00 0001111111 1 12222
Q ss_pred HHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCC
Q 003145 740 HLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSS 815 (844)
Q Consensus 740 ~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna 815 (844)
.+ +.. ...+.++.+..++||.|+++|||.|++.++++++ ++++++++||| +.|| ||+ +++|+||||
T Consensus 132 ~l-~~~--~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~------i~~~~~i~~GD-~~NDi~m~~~ag~~vam~Na 201 (230)
T PRK01158 132 LL-EEL--GLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMG------IDPEEVAAIGD-SENDLEMFEVAGFGVAVANA 201 (230)
T ss_pred HH-HHc--CCcEEEEecceEEEEeeCCCChHHHHHHHHHHhC------CCHHHEEEECC-chhhHHHHHhcCceEEecCc
Confidence 23 221 1235566666789999999999999999999998 78899999999 9999 999 899999999
Q ss_pred CCcc
Q 003145 816 INSL 819 (844)
Q Consensus 816 ~~~~ 819 (844)
.+++
T Consensus 202 ~~~v 205 (230)
T PRK01158 202 DEEL 205 (230)
T ss_pred cHHH
Confidence 8765
|
|
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.4e-20 Score=215.49 Aligned_cols=275 Identities=16% Similarity=0.100 Sum_probs=188.5
Q ss_pred CCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCCh-hhhhcCC-c---cHHHHHhhhcCCEEEEecHHHHHHHH
Q 003145 229 YKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS-EIHRTLP-S---RSDLLRAVLAADLVGFHTYDYARHFV 303 (844)
Q Consensus 229 ~~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~-e~~r~lp-~---r~~ll~~ll~aDlIgf~t~~~~~~Fl 303 (844)
..++|+|+++-..... +.++ +..+.++++.++|.-.-.. ..-...+ | -+..+..+-.+|.|...|....+...
T Consensus 209 ~~~~di~i~dr~~~~~-~~~~-~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~l~ 286 (500)
T TIGR02918 209 LTKKDIIILDRSTGIG-QAVL-ENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQILK 286 (500)
T ss_pred CCCCCEEEEcCCcccc-hHHH-hcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHHHH
Confidence 4567998887555433 3333 5567899999999642111 0000000 1 12223444456888777764433332
Q ss_pred HHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHH
Q 003145 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLL 383 (844)
Q Consensus 304 ~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~ 383 (844)
..... +.+...+|.++|+|++...+.+. ....+..|++||||.+.||+..+|+
T Consensus 287 ~~~~~------------~~~~~~ki~viP~g~~~~~~~~~---------------~~r~~~~il~vGrl~~~Kg~~~li~ 339 (500)
T TIGR02918 287 NQFKK------------YYNIEPRIYTIPVGSLDELQYPE---------------QERKPFSIITASRLAKEKHIDWLVK 339 (500)
T ss_pred HHhhh------------hcCCCCcEEEEcCCCcccccCcc---------------cccCCeEEEEEeccccccCHHHHHH
Confidence 21111 11223568899999876543221 0113468999999999999999999
Q ss_pred HHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEE
Q 003145 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (844)
Q Consensus 384 Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~ 463 (844)
|+.++.++.|++ .|+++|. +++. +++++++.+.+.. + .|. |.|.. ++..+|+.||++
T Consensus 340 A~~~l~~~~p~~----~l~i~G~-----G~~~----~~l~~~i~~~~l~----~--~V~-f~G~~---~~~~~~~~adv~ 396 (500)
T TIGR02918 340 AVVKAKKSVPEL----TFDIYGE-----GGEK----QKLQKIINENQAQ----D--YIH-LKGHR---NLSEVYKDYELY 396 (500)
T ss_pred HHHHHHhhCCCe----EEEEEEC-----chhH----HHHHHHHHHcCCC----C--eEE-EcCCC---CHHHHHHhCCEE
Confidence 999999989875 4887864 3333 3455555543321 1 255 46754 578899999999
Q ss_pred EEcCCCcCCChhHhhhhhcccCCCceEEEeCCC-Cchhhc--cCCeEEECC----CC----HHHHHHHHHHHhcCCHHHH
Q 003145 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA-GAAQSL--GAGAILVNP----WN----ITEVANAIARALNMSPEER 532 (844)
Q Consensus 464 v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~-G~~~~l--g~~g~lvnP----~d----~~~~A~ai~~aL~m~~~er 532 (844)
|+||.+||||++++|||||| .|+|+|... |..+.+ |.+|++|++ .| ++++|++|.++|+ ++++
T Consensus 397 v~pS~~Egfgl~~lEAma~G----~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~--~~~~ 470 (500)
T TIGR02918 397 LSASTSEGFGLTLMEAVGSG----LGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN--SNDI 470 (500)
T ss_pred EEcCccccccHHHHHHHHhC----CCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC--hHHH
Confidence 99999999999999999996 789999986 677777 788999974 33 8899999999994 4467
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 003145 533 EKRHWHNFTHVTTHTAQEWAETFVSELND 561 (844)
Q Consensus 533 ~~r~~~~~~~v~~~~~~~W~~~fl~~l~~ 561 (844)
.++.+.+++.++++++..-++.+.+.+++
T Consensus 471 ~~~~~~a~~~a~~fs~~~v~~~w~~ll~~ 499 (500)
T TIGR02918 471 DAFHEYSYQIAEGFLTANIIEKWKKLVRE 499 (500)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 77888889999999999988888766653
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.7e-20 Score=206.39 Aligned_cols=265 Identities=20% Similarity=0.219 Sum_probs=190.5
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHh
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (844)
..|+|++|..+...+..++.+. .++|+.+.+|-.++.... ... .+..+|.+.+.+....+.+. ...
T Consensus 78 ~~dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~------~~~---~~~~~~~vi~~s~~~~~~~~----~~~ 143 (355)
T cd03819 78 KVDIVHARSRAPAWSAYLAARR-TRPPFVTTVHGFYSVNFR------YNA---IMARGDRVIAVSNFIADHIR----ENY 143 (355)
T ss_pred CCCEEEECCCchhHHHHHHHHh-cCCCEEEEeCCchhhHHH------HHH---HHHhcCEEEEeCHHHHHHHH----Hhc
Confidence 4699999987766555554433 378999999977653321 112 23468888877765444433 112
Q ss_pred CcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccccCCHHHHHHHHHH
Q 003145 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFEK 387 (844)
Q Consensus 311 ~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~l~Af~~ 387 (844)
+. ...++.++|+|||...|.+..... .....+++++ .++++|+++||+.+.||+..+++|+..
T Consensus 144 ~~-----------~~~k~~~i~ngi~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~ 209 (355)
T cd03819 144 GV-----------DPDRIRVIPRGVDLDRFDPGAVPP---ERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALAR 209 (355)
T ss_pred CC-----------ChhhEEEecCCccccccCccccch---HHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHHH
Confidence 21 234788999999998886532211 1222345554 367789999999999999999999999
Q ss_pred HHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcC
Q 003145 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTS 467 (844)
Q Consensus 388 ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S 467 (844)
+.++.++ +.|+++|.+.. ...+.+.+.+.+.+.+.. ..|.+ .|. .+++..+|+.||++++||
T Consensus 210 l~~~~~~----~~l~ivG~~~~-----~~~~~~~~~~~~~~~~~~------~~v~~-~g~--~~~~~~~l~~ad~~i~ps 271 (355)
T cd03819 210 LKKDDPD----VHLLIVGDAQG-----RRFYYAELLELIKRLGLQ------DRVTF-VGH--CSDMPAAYALADIVVSAS 271 (355)
T ss_pred HHhcCCC----eEEEEEECCcc-----cchHHHHHHHHHHHcCCc------ceEEE-cCC--cccHHHHHHhCCEEEecC
Confidence 9877665 45888875321 123334444444443221 12554 666 678999999999999999
Q ss_pred -CCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 003145 468 -LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (844)
Q Consensus 468 -~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~ 544 (844)
..||||++++|||||| .|+|+|..+|..+.+ +.+|++++|.|+++++++|..++..+++++.++.+++++.++
T Consensus 272 ~~~e~~~~~l~EA~a~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~ 347 (355)
T cd03819 272 TEPEAFGRTAVEAQAMG----RPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVE 347 (355)
T ss_pred CCCCCCchHHHHHHhcC----CCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 7899999999999996 899999998888877 347999999999999999998888888899999999888875
Q ss_pred h
Q 003145 545 T 545 (844)
Q Consensus 545 ~ 545 (844)
+
T Consensus 348 ~ 348 (355)
T cd03819 348 T 348 (355)
T ss_pred H
Confidence 4
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.7e-21 Score=205.92 Aligned_cols=213 Identities=15% Similarity=0.153 Sum_probs=140.5
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc---eEEe
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL---WLAA 666 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l---~lia 666 (844)
..++|++|+||||++. ...++++++++|++|.+ .|+.|+|+|||+...+.++++.+++ ++|+
T Consensus 6 ~~~lI~~DlDGTLL~~--------------~~~i~~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~ 70 (271)
T PRK03669 6 DPLLIFTDLDGTLLDS--------------HTYDWQPAAPWLTRLRE-AQVPVILCSSKTAAEMLPLQQTLGLQGLPLIA 70 (271)
T ss_pred CCeEEEEeCccCCcCC--------------CCcCcHHHHHHHHHHHH-cCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEE
Confidence 4789999999999976 24578899999999987 6999999999999999999998854 5999
Q ss_pred ecceEEEecCC-e----eeecccccCChHHHHHHHHHHHHHHhcCCCceE--ee-----------------------ccc
Q 003145 667 ENGMFLRCTTG-K----WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHF--EQ-----------------------RET 716 (844)
Q Consensus 667 enG~~i~~~~~-~----w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~i--E~-----------------------k~~ 716 (844)
+||+.+...++ . +. ......+ .+.+.++++...+. .+..+ .. ...
T Consensus 71 ~NGa~I~~~~~~~~~~~~~-~~~~~l~---~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (271)
T PRK03669 71 ENGAVIQLDEQWQDHPDFP-RIISGIS---HGEIRQVLNTLREK-EGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEA 145 (271)
T ss_pred eCCCEEEecCcccCCCCce-EeecCCC---HHHHHHHHHHHHHh-cCCceeecccCCHHHHHHHhCCCHHHHHHHhcccc
Confidence 99999985321 1 10 1111223 23444444443221 01000 00 000
Q ss_pred eEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCC---CCceE
Q 003145 717 SLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKT---AIDYV 793 (844)
Q Consensus 717 sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~---~~d~v 793 (844)
...+.+.. ++ .+..++.+.+ .. ..+.++.+..++||+|+++|||.|++.|++++| + +.+++
T Consensus 146 ~~~~~~~~-~~----~~~~~~~~~l-~~----~~~~~~~~~~~iEi~~~g~sKg~al~~l~~~lg------i~~~~~~~v 209 (271)
T PRK03669 146 SVTLIWRD-SD----ERMAQFTARL-AE----LGLQFVQGARFWHVLDASAGKDQAANWLIATYQ------QLSGTRPTT 209 (271)
T ss_pred CceeEecC-CH----HHHHHHHHHH-HH----CCCEEEecCeeEEEecCCCCHHHHHHHHHHHHH------hhcCCCceE
Confidence 00111110 11 1223344555 32 135666666799999999999999999999999 7 88999
Q ss_pred EEEeeCCCch--hhc--cCcEEEeCCCCc---c------hhhh--cCCHHHHHHHHHHHhh
Q 003145 794 LCIGHFLGKV--LLT--QFLIQVGSSINS---L------SKEK--KRKVHQLFGIFLRFSY 839 (844)
Q Consensus 794 laiGD~~~nD--Mf~--g~~Iavgna~~~---~------a~~~--l~~~~~v~~~l~~~~~ 839 (844)
+|||| +.|| ||+ |+||||||+.++ + |.+. -.+.+-+...|+++..
T Consensus 210 iafGD-s~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~~~~ 269 (271)
T PRK03669 210 LGLGD-GPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDHFFS 269 (271)
T ss_pred EEEcC-CHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHHHHh
Confidence 99999 9999 999 999999987632 2 2222 2334456666665543
|
|
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.5e-20 Score=205.69 Aligned_cols=253 Identities=18% Similarity=0.074 Sum_probs=172.3
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHH-hhhcCCEEEEecHHHHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLR-AVLAADLVGFHTYDYARHFVSACTRI 309 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~-~ll~aDlIgf~t~~~~~~Fl~~~~~~ 309 (844)
+.|+|++|..+...++..+.+......+.+..|..+...+..........+.. .+..+|.+...+....+.+...
T Consensus 80 ~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~---- 155 (358)
T cd03812 80 KYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWLFGK---- 155 (358)
T ss_pred CCCEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHHHhC----
Confidence 56999999988777777776665555567777876654332221111001111 1234666666555443333220
Q ss_pred hCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccccCCHHHHHHHHH
Q 003145 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFE 386 (844)
Q Consensus 310 l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~l~Af~ 386 (844)
....++.++|+|||.+.|.+... ..+. +..+ .++.+|+++||+++.||+..+++|+.
T Consensus 156 -------------~~~~~~~vi~ngvd~~~~~~~~~---~~~~----~~~~~~~~~~~~i~~vGr~~~~Kg~~~li~a~~ 215 (358)
T cd03812 156 -------------VKNKKFKVIPNGIDLEKFIFNEE---IRKK----RRELGILEDKFVIGHVGRFSEQKNHEFLIEIFA 215 (358)
T ss_pred -------------CCcccEEEEeccCcHHHcCCCch---hhhH----HHHcCCCCCCEEEEEEeccccccChHHHHHHHH
Confidence 11357889999999988764321 1111 2222 46789999999999999999999999
Q ss_pred HHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEc
Q 003145 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 466 (844)
Q Consensus 387 ~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~ 466 (844)
.+.+++|++ .|+++|. ++....+++ .+.+.+. . ..|.+ .|. .+++..+|+.||++|+|
T Consensus 216 ~l~~~~~~~----~l~ivG~-----g~~~~~~~~----~~~~~~~----~--~~v~~-~g~--~~~~~~~~~~adi~v~p 273 (358)
T cd03812 216 ELLKKNPNA----KLLLVGD-----GELEEEIKK----KVKELGL----E--DKVIF-LGV--RNDVPELLQAMDVFLFP 273 (358)
T ss_pred HHHHhCCCe----EEEEEeC-----CchHHHHHH----HHHhcCC----C--CcEEE-ecc--cCCHHHHHHhcCEEEec
Confidence 999888864 4888864 233333333 3333221 1 13554 565 67899999999999999
Q ss_pred CCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhccC-CeEEECCCCHHHHHHHHHHHhcCCHHHHH
Q 003145 467 SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGA-GAILVNPWNITEVANAIARALNMSPEERE 533 (844)
Q Consensus 467 S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~lg~-~g~lvnP~d~~~~A~ai~~aL~m~~~er~ 533 (844)
|..||||++++|||||| .|+|+|+.+|..+.++. ++++..+.+++++|++|.++++++...+.
T Consensus 274 s~~E~~~~~~lEAma~G----~PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~~i~~l~~~~~~~~~ 337 (358)
T cd03812 274 SLYEGLPLVLIEAQASG----LPCILSDTITKEVDLTDLVKFLSLDESPEIWAEEILKLKSEDRRERS 337 (358)
T ss_pred ccccCCCHHHHHHHHhC----CCEEEEcCCchhhhhccCccEEeCCCCHHHHHHHHHHHHhCcchhhh
Confidence 99999999999999996 89999999999988844 35555566789999999999998864433
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.3e-19 Score=206.60 Aligned_cols=272 Identities=14% Similarity=0.102 Sum_probs=191.4
Q ss_pred CCCEEEEeCccch-hHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHh-hhcCCEEEEecHHHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLM-FLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA-VLAADLVGFHTYDYARHFVSACTR 308 (844)
Q Consensus 231 ~~DiVwvHDyhl~-llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~-ll~aDlIgf~t~~~~~~Fl~~~~~ 308 (844)
+.|+++.|-++.. ....+++++....++....|-.....+.. .+....+.+. +-.+|.|.+.+....+.+.+
T Consensus 127 ~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~~--~~~~~~~~~~~~~~~d~ii~~S~~~~~~l~~---- 200 (407)
T cd04946 127 QGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDRY--PSGYIPLRRYLLSSLDAVFPCSEQGRNYLQK---- 200 (407)
T ss_pred CceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhhc--cccchHHHHHHHhcCCEEEECCHHHHHHHHH----
Confidence 4567766654443 33345666655556888888532111111 1111112222 34689999888766554432
Q ss_pred HhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHH
Q 003145 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388 (844)
Q Consensus 309 ~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~l 388 (844)
.++ ....++.++|+|+|...+.+. + ...+...|+++||+.+.||++.+++|+.++
T Consensus 201 ~~~-----------~~~~ki~vi~~gv~~~~~~~~---~-----------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l 255 (407)
T cd04946 201 RYP-----------AYKEKIKVSYLGVSDPGIISK---P-----------SKDDTLRIVSCSYLVPVKRVDLIIKALAAL 255 (407)
T ss_pred HCC-----------CccccEEEEECCcccccccCC---C-----------CCCCCEEEEEeeccccccCHHHHHHHHHHH
Confidence 111 123467899999998765431 0 013567899999999999999999999999
Q ss_pred HHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHh--CcEEEEc
Q 003145 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV--TDVALVT 466 (844)
Q Consensus 389 l~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~--ADv~v~~ 466 (844)
.+.+|+.. +.++.+|. ++....++ +++.+.+. ...|. +.|.++.+++.++|+. ||+|+.|
T Consensus 256 ~~~~p~~~--l~~~iiG~-----g~~~~~l~----~~~~~~~~------~~~V~-f~G~v~~~e~~~~~~~~~~~v~v~~ 317 (407)
T cd04946 256 AKARPSIK--IKWTHIGG-----GPLEDTLK----ELAESKPE------NISVN-FTGELSNSEVYKLYKENPVDVFVNL 317 (407)
T ss_pred HHhCCCce--EEEEEEeC-----chHHHHHH----HHHHhcCC------CceEE-EecCCChHHHHHHHhhcCCCEEEeC
Confidence 99888753 66776764 33333333 34332111 01255 5899999999999986 7899999
Q ss_pred CCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCC-CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 003145 467 SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPW-NITEVANAIARALNMSPEEREKRHWHNFTHV 543 (844)
Q Consensus 467 S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~-d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v 543 (844)
|..|||+++++|||||| .|+|+|..+|..+.+ |.+|++++|. |++++|++|.+++++ ++++.++.+++++.+
T Consensus 318 S~~Eg~p~~llEAma~G----~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I~~ll~~-~~~~~~m~~~ar~~~ 392 (407)
T cd04946 318 SESEGLPVSIMEAMSFG----IPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSLSKFIDN-EEEYQTMREKAREKW 392 (407)
T ss_pred CccccccHHHHHHHHcC----CCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHH
Confidence 99999999999999996 799999999999888 4468999874 899999999999984 568888888888887
Q ss_pred -HhcCHHHHHHHHH
Q 003145 544 -TTHTAQEWAETFV 556 (844)
Q Consensus 544 -~~~~~~~W~~~fl 556 (844)
++|++..+.++|+
T Consensus 393 ~~~f~~~~~~~~~~ 406 (407)
T cd04946 393 EENFNASKNYREFA 406 (407)
T ss_pred HHHcCHHHhHHHhc
Confidence 6789999988875
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-20 Score=206.67 Aligned_cols=276 Identities=20% Similarity=0.186 Sum_probs=199.7
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCCh--hhhhc---CCccHHHHHhhhcCCEEEEecHHHHHHHHH
Q 003145 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS--EIHRT---LPSRSDLLRAVLAADLVGFHTYDYARHFVS 304 (844)
Q Consensus 230 ~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~--e~~r~---lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~ 304 (844)
...|+||+|++..... +....++.+.+|-.+|.. ..+.. ...+......+..+|.+.+.+....+.+..
T Consensus 84 ~~~Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~ 157 (365)
T cd03809 84 LGLDLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLR 157 (365)
T ss_pred cCCCeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHH
Confidence 4579999998777665 456889999999765422 11110 011223344456789988888766555543
Q ss_pred HHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHH
Q 003145 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 384 (844)
Q Consensus 305 ~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A 384 (844)
. .+ ....++.++|+|+|...+..... +. ........++++|+++||+.+.||+..+++|
T Consensus 158 ~----~~-----------~~~~~~~vi~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~i~~~G~~~~~K~~~~~l~~ 216 (365)
T cd03809 158 Y----LG-----------VPPDKIVVIPLGVDPRFRPPPAE-----AE-VLRALYLLPRPYFLYVGTIEPRKNLERLLEA 216 (365)
T ss_pred H----hC-----------cCHHHEEeeccccCccccCCCch-----HH-HHHHhcCCCCCeEEEeCCCccccCHHHHHHH
Confidence 2 11 12346789999999887654211 11 1111222578899999999999999999999
Q ss_pred HHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEE
Q 003145 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (844)
Q Consensus 385 f~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v 464 (844)
+..+.+.+|+ +.|+++|..... +......+ .+.+. ...+.+.|.++.+++..+|+.||+++
T Consensus 217 ~~~~~~~~~~----~~l~i~G~~~~~----~~~~~~~~----~~~~~-------~~~v~~~g~~~~~~~~~~~~~~d~~l 277 (365)
T cd03809 217 FARLPAKGPD----PKLVIVGKRGWL----NEELLARL----RELGL-------GDRVRFLGYVSDEELAALYRGARAFV 277 (365)
T ss_pred HHHHHHhcCC----CCEEEecCCccc----cHHHHHHH----HHcCC-------CCeEEECCCCChhHHHHHHhhhhhhc
Confidence 9999888774 447777643211 11112222 11111 12344689999999999999999999
Q ss_pred EcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 003145 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (844)
Q Consensus 465 ~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~ 544 (844)
+||..||+|++++|||+|| .|+|+|+.+|..+.++.+|++++|.|.++++++|.++++. ++.+..+.+++++.+.
T Consensus 278 ~ps~~e~~~~~~~Ea~a~G----~pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~ 352 (365)
T cd03809 278 FPSLYEGFGLPVLEAMACG----TPVIASNISSLPEVAGDAALYFDPLDPEALAAAIERLLED-PALREELRERGLARAK 352 (365)
T ss_pred ccchhccCCCCHHHHhcCC----CcEEecCCCCccceecCceeeeCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHH
Confidence 9999999999999999996 7899999888888777889999999999999999999875 5577777788888899
Q ss_pred hcCHHHHHHHHH
Q 003145 545 THTAQEWAETFV 556 (844)
Q Consensus 545 ~~~~~~W~~~fl 556 (844)
+++|+.++++++
T Consensus 353 ~~sw~~~~~~~~ 364 (365)
T cd03809 353 RFSWEKTARRTL 364 (365)
T ss_pred hCCHHHHHHHHh
Confidence 999999998875
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.1e-21 Score=201.89 Aligned_cols=193 Identities=18% Similarity=0.307 Sum_probs=132.0
Q ss_pred EEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC--ceEEeecceE
Q 003145 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGMF 671 (844)
Q Consensus 594 i~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--l~liaenG~~ 671 (844)
|++|+||||++. ...++++++++|++|.+ .|+.++|+|||++..+.++++.++ .++|++||++
T Consensus 1 i~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~ 65 (254)
T PF08282_consen 1 IFSDLDGTLLNS--------------DGKISPETIEALKELQE-KGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGAL 65 (254)
T ss_dssp EEEECCTTTCST--------------TSSSCHHHHHHHHHHHH-TTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTE
T ss_pred cEEEECCceecC--------------CCeeCHHHHHHHHhhcc-cceEEEEEccCcccccccccccccchhhhcccccce
Confidence 689999999986 34589999999999998 599999999999999999999884 5899999999
Q ss_pred EEecCCeeeecccccCChHHHHHHHHHHHHHHhcC-------CC-ceEeec-----------c-----------------
Q 003145 672 LRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERT-------PR-SHFEQR-----------E----------------- 715 (844)
Q Consensus 672 i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt-------~g-s~iE~k-----------~----------------- 715 (844)
+....++. +....++ .+.+..+++...... +. .++... .
T Consensus 66 i~~~~~~~--l~~~~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (254)
T PF08282_consen 66 IDDPKGKI--LYEKPID---SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEE 140 (254)
T ss_dssp EEETTTEE--EEEESB----HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSS
T ss_pred eeeccccc--chhhhee---ccchhheeehhhhcccccccccceeeecccccccchhhhhhccccccccccccccccccc
Confidence 94333331 1112233 344445554443321 11 111111 0
Q ss_pred -ceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEE
Q 003145 716 -TSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVL 794 (844)
Q Consensus 716 -~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vl 794 (844)
..+.++. + ..+...+.+.+ ...+.+....+..+..++||.|+++|||.|++.|+++++ ++.+.++
T Consensus 141 i~ki~~~~---~----~~~~~~l~~~l-~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~~------i~~~~~~ 206 (254)
T PF08282_consen 141 IFKILFFP---D----PEDLEQLREEL-KKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYLG------ISPEDII 206 (254)
T ss_dssp ESEEEEES---C----HHHHHHHHHHH-HHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHHT------TSGGGEE
T ss_pred ceeeeccc---c----chhhhhhhhhh-ccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhcc------cccceeE
Confidence 0111110 1 11223333333 222222113345688999999999999999999999999 7889999
Q ss_pred EEeeCCCch--hhc--cCcEEEeCCCCcchh
Q 003145 795 CIGHFLGKV--LLT--QFLIQVGSSINSLSK 821 (844)
Q Consensus 795 aiGD~~~nD--Mf~--g~~Iavgna~~~~a~ 821 (844)
+||| +.|| ||+ +++|+||||.+++.+
T Consensus 207 ~~GD-~~ND~~Ml~~~~~~~am~na~~~~k~ 236 (254)
T PF08282_consen 207 AFGD-SENDIEMLELAGYSVAMGNATPELKK 236 (254)
T ss_dssp EEES-SGGGHHHHHHSSEEEEETTS-HHHHH
T ss_pred Eeec-ccccHhHHhhcCeEEEEcCCCHHHHH
Confidence 9999 9999 999 999999999876533
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.8e-20 Score=201.05 Aligned_cols=278 Identities=17% Similarity=0.187 Sum_probs=187.4
Q ss_pred CCCCCEEEEeCccc-hhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHH------HHhhhcCCEEEEecHHHHHH
Q 003145 229 YKDGDVVWCHDYHL-MFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL------LRAVLAADLVGFHTYDYARH 301 (844)
Q Consensus 229 ~~~~DiVwvHDyhl-~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~l------l~~ll~aDlIgf~t~~~~~~ 301 (844)
....|+|++|+... ...+.....+..+.++.+..|..++...... -+....+ ...+..+|.+.+.+......
T Consensus 85 ~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~ 163 (375)
T cd03821 85 IREADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPH-KALKKRLAWFLFERRLLQAAAAVHATSEQEAAE 163 (375)
T ss_pred CCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEcccccccccccc-chhhhHHHHHHHHHHHHhcCCEEEECCHHHHHH
Confidence 34679999998432 2222222222347888999997665432100 0011111 11123466666665333222
Q ss_pred HHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccccCCH
Q 003145 302 FVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGI 378 (844)
Q Consensus 302 Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi 378 (844)
... .....++.++|+|+|.+.|.+... . .. ++.+ .++++|+++||+++.||+
T Consensus 164 ~~~-----------------~~~~~~~~vi~~~~~~~~~~~~~~-----~--~~-~~~~~~~~~~~~i~~~G~~~~~K~~ 218 (375)
T cd03821 164 IRR-----------------LGLKAPIAVIPNGVDIPPFAALPS-----R--GR-RRKFPILPDKRIILFLGRLHPKKGL 218 (375)
T ss_pred HHh-----------------hCCcccEEEcCCCcChhccCcchh-----h--hh-hhhccCCCCCcEEEEEeCcchhcCH
Confidence 111 122357889999999988764311 0 01 2333 467899999999999999
Q ss_pred HHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHH
Q 003145 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 458 (844)
Q Consensus 379 ~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 458 (844)
..+++|+..+.+++|++ .|+++|... +.+. ..+..++.+.+. . ..|. +.|.++.+++..+|+
T Consensus 219 ~~li~a~~~l~~~~~~~----~l~i~G~~~----~~~~---~~~~~~~~~~~~----~--~~v~-~~g~~~~~~~~~~~~ 280 (375)
T cd03821 219 DLLIEAFAKLAERFPDW----HLVIAGPDE----GGYR---AELKQIAAALGL----E--DRVT-FTGMLYGEDKAAALA 280 (375)
T ss_pred HHHHHHHHHhhhhcCCe----EEEEECCCC----cchH---HHHHHHHHhcCc----c--ceEE-EcCCCChHHHHHHHh
Confidence 99999999998887764 487776422 1121 222222222221 1 1244 589999999999999
Q ss_pred hCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhcc-CCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHH
Q 003145 459 VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLG-AGAILVNPWNITEVANAIARALNMSPEEREKRHW 537 (844)
Q Consensus 459 ~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~lg-~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~ 537 (844)
.||++++||..||||++++|||+|| .|+|+|+.+|..+.+. ..|+++ |.+.++++++|.++++++ +++.++.+
T Consensus 281 ~adv~v~ps~~e~~~~~~~Eama~G----~PvI~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~l~~~~-~~~~~~~~ 354 (375)
T cd03821 281 DADLFVLPSHSENFGIVVAEALACG----TPVVTTDKVPWQELIEYGCGWVV-DDDVDALAAALRRALELP-QRLKAMGE 354 (375)
T ss_pred hCCEEEeccccCCCCcHHHHHHhcC----CCEEEcCCCCHHHHhhcCceEEe-CCChHHHHHHHHHHHhCH-HHHHHHHH
Confidence 9999999999999999999999996 7999999999888873 345655 456699999999999987 67777888
Q ss_pred HHHHH-HHhcCHHHHHHHHH
Q 003145 538 HNFTH-VTTHTAQEWAETFV 556 (844)
Q Consensus 538 ~~~~~-v~~~~~~~W~~~fl 556 (844)
++++. .++++++.-++.++
T Consensus 355 ~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 355 NGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHHHHHhcCHHHHHHHhh
Confidence 88887 58899998888765
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-19 Score=207.37 Aligned_cols=308 Identities=13% Similarity=0.106 Sum_probs=192.5
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCcc-HHHH-----------------------H--
Q 003145 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-SDLL-----------------------R-- 283 (844)
Q Consensus 230 ~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r-~~ll-----------------------~-- 283 (844)
.+.|+++.||++.......||++.++++.+|+.|- .++-|.|-.. ..+- +
T Consensus 147 ~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHA----T~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~ 222 (590)
T cd03793 147 EPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHA----TLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERA 222 (590)
T ss_pred CCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecc----cccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHH
Confidence 46799999999999999999988899999999993 4444432110 0000 0
Q ss_pred hhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCC----chHHHHHH----
Q 003145 284 AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEIN----PVQVHIKE---- 355 (844)
Q Consensus 284 ~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~----~~~~~~~~---- 355 (844)
....||.+..-+.... .-|.. ..+++..+ |+|+|||++.|.+..... ..++.+.+
T Consensus 223 aa~~Ad~fttVS~it~----~E~~~------------Ll~~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~ 285 (590)
T cd03793 223 AAHCAHVFTTVSEITA----YEAEH------------LLKRKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRG 285 (590)
T ss_pred HHhhCCEEEECChHHH----HHHHH------------HhCCCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHH
Confidence 1112232222211100 01122 22333333 999999999987542110 11122222
Q ss_pred -HHHHh---CCCcEEEE-Eecccc-cCCHHHHHHHHHHHHHhCcCCC-CceEEEEEEcCCCCCh---------HHHHHHH
Q 003145 356 -LQETF---AGRKVMLG-VDRLDM-IKGIPQKLLAFEKFLEENSDWR-GKVVLLQIAVPTRTDV---------PEYQRLT 419 (844)
Q Consensus 356 -lr~~~---~~~~vil~-VdRld~-~KGi~~~l~Af~~ll~~~P~~~-~~v~Lv~i~~p~r~~~---------~~~~~l~ 419 (844)
++.++ .+++++++ +||+++ .||++.+|+|+.++-..-..-. +..++..+..|+..+. .-.++|+
T Consensus 286 ~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~ 365 (590)
T cd03793 286 HFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLR 365 (590)
T ss_pred HHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHH
Confidence 34444 26678888 899999 9999999999998854211111 1223333444655431 2234566
Q ss_pred HHHHHHHHHhhcc--------------------------------------------------------------cC-CC
Q 003145 420 SQVHEIVGRINGR--------------------------------------------------------------FG-TL 436 (844)
Q Consensus 420 ~~l~~lv~~IN~~--------------------------------------------------------------~g-~~ 436 (844)
+.++++..+|+.+ |. ..
T Consensus 366 ~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~ 445 (590)
T cd03793 366 DTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPE 445 (590)
T ss_pred HHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCC
Confidence 6666655555544 00 01
Q ss_pred CcccEEEeCCCCC------HHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCch----hhcc---
Q 003145 437 TAVPIHHLDRSLD------FPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA----QSLG--- 503 (844)
Q Consensus 437 ~~~pv~~~~~~v~------~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~----~~lg--- 503 (844)
+...|+|....++ ..+...+|+.||+||+||++||||++++|||||| .|+|+|..+|.. +.++
T Consensus 446 drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G----~PvI~t~~~gf~~~v~E~v~~~~ 521 (590)
T cd03793 446 DRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG----IPSITTNLSGFGCFMEEHIEDPE 521 (590)
T ss_pred CeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcC----CCEEEccCcchhhhhHHHhccCC
Confidence 2234555443333 2357889999999999999999999999999996 899999999884 4443
Q ss_pred CCeEEEC-------CCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 003145 504 AGAILVN-------PWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (844)
Q Consensus 504 ~~g~lvn-------P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (844)
..|++|. +.+++++|++|.+.++++..++........+....++|.+-+..+++....+
T Consensus 522 ~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~A 587 (590)
T cd03793 522 SYGIYIVDRRFKSPDESVQQLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLA 587 (590)
T ss_pred CceEEEecCCccchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 3578887 4668899999999997654333333333346678899999998888766543
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.3e-20 Score=208.73 Aligned_cols=188 Identities=15% Similarity=0.075 Sum_probs=132.0
Q ss_pred EEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEec-c-cccCCHHHHHHHHHHHHHhCcCCCCceEEEE
Q 003145 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDR-L-DMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 403 (844)
Q Consensus 326 ~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdR-l-d~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~ 403 (844)
.++.++|+|||++.+....... ..+ ...++++|++|+| + ++.||+..+++|+..+ .+ ++.|++
T Consensus 212 ~~i~vI~NGid~~~~~~~~~~~-------~~~-~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~----~~~L~i 276 (405)
T PRK10125 212 GRCRIINNGIDMATEAILAELP-------PVR-ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GD----KIELHT 276 (405)
T ss_pred CCEEEeCCCcCccccccccccc-------ccc-cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CC----CeEEEE
Confidence 4788999999975432211100 001 1246789999999 4 5789999999999875 22 366888
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCC-CCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhc
Q 003145 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS-LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482 (844)
Q Consensus 404 i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~-v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~ 482 (844)
+|.+. ++. . ..|.+ .|. .+.+++..+|+.||+||+||..||||+|++|||||
T Consensus 277 vG~g~----~~~---~-------------------~~v~~-~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~ 329 (405)
T PRK10125 277 FGKFS----PFT---A-------------------GNVVN-HGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSI 329 (405)
T ss_pred EcCCC----ccc---c-------------------cceEE-ecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHc
Confidence 87421 100 0 12444 333 36789999999999999999999999999999999
Q ss_pred ccCCCceEEEeCCCCchhhc-cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHH
Q 003145 483 QDLKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VTTHTAQEWAETFVSELN 560 (844)
Q Consensus 483 ~~~~~g~lVlSe~~G~~~~l-g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~fl~~l~ 560 (844)
| .|||+|+.+|+.+.+ +.+|++|+|.|++++|+++...+... ........+++. .+.|+++.-++++++.++
T Consensus 330 G----~PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~~--~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~ 403 (405)
T PRK10125 330 G----VPVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQA--VFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQ 403 (405)
T ss_pred C----CCEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHHH--hhhhHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 6 899999999998887 45799999999999998643222110 000112334555 466999999998887665
Q ss_pred H
Q 003145 561 D 561 (844)
Q Consensus 561 ~ 561 (844)
+
T Consensus 404 ~ 404 (405)
T PRK10125 404 N 404 (405)
T ss_pred h
Confidence 3
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.4e-20 Score=219.35 Aligned_cols=224 Identities=13% Similarity=0.167 Sum_probs=141.8
Q ss_pred HHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC
Q 003145 582 SIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (844)
Q Consensus 582 ~~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (844)
..+.|+. +.|||++|+||||++. +..++++++++|++|.+ .|+.|+|+|||++..+.++++.++
T Consensus 300 ~~~~~~~-~iKLIa~DLDGTLLn~--------------d~~Is~~t~eAI~kl~e-kGi~~vIATGR~~~~i~~~l~~L~ 363 (580)
T PLN02887 300 SLRFYKP-KFSYIFCDMDGTLLNS--------------KSQISETNAKALKEALS-RGVKVVIATGKARPAVIDILKMVD 363 (580)
T ss_pred chhhhcc-CccEEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHhC
Confidence 3444544 6899999999999986 35689999999999998 699999999999999998888764
Q ss_pred c-----------eEEeecceEEEe-cCCe-eeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEE---------
Q 003145 662 L-----------WLAAENGMFLRC-TTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLV--------- 719 (844)
Q Consensus 662 l-----------~liaenG~~i~~-~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~--------- 719 (844)
+ ++|+.||+++.. .++. +... ++ .+.+.++++...+..-...+...+....
T Consensus 364 l~~~~~~I~~~~p~I~~NGA~I~d~~g~~I~~~~----L~---~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~ 436 (580)
T PLN02887 364 LAGKDGIISESSPGVFLQGLLVYGRQGREIYRSN----LD---QEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDS 436 (580)
T ss_pred cccccceEeecccEEeecCeEEEECCCcEEEEEe----CC---HHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHH
Confidence 2 356679999985 2222 3332 33 3444455544322111000110000000
Q ss_pred EE--ee--c---C-Ch-hh------------h--HHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHH
Q 003145 720 WN--YK--Y---A-DV-EF------------G--RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDR 775 (844)
Q Consensus 720 ~h--y~--~---~-d~-e~------------~--~~qa~el~~~L~~~~~~~~~~~v~-~g~~~vEV~p~gvnKG~al~~ 775 (844)
++ +. . . +. ++ . .....++.+.+ ...+. ..+.++ ++.+++||.|+|+|||.||+.
T Consensus 437 ~~~~~~~~~~~~i~~l~~~~~~~~i~Ki~~~~~~e~~~~~l~~~l-~~~~~-~~~~v~~S~~~~lEI~p~gvSKG~ALk~ 514 (580)
T PLN02887 437 LHTIYHEPKAEIMSSVDQLLAAADIQKVIFLDTAEGVSSVLRPYW-SEATG-DRANVVQAQPDMLEIVPPGTSKGNGVKM 514 (580)
T ss_pred HHHhhccccccccCCHHHhhcccCeeEEEEEcChHHHHHHHHHHH-HHHhc-CcEEEEEecCcEEEEecCCCCHHHHHHH
Confidence 00 00 0 0 00 00 0 00011222333 22222 235544 467899999999999999999
Q ss_pred HHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcc---hhhhcCC--HHHHHHHHHHH
Q 003145 776 ILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSL---SKEKKRK--VHQLFGIFLRF 837 (844)
Q Consensus 776 Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~---a~~~l~~--~~~v~~~l~~~ 837 (844)
|++++| ++.++|+|||| +.|| ||+ |+|||||||.+++ |++...+ .+-|..+|+++
T Consensus 515 L~e~lG------I~~eeviAFGD-s~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek~ 578 (580)
T PLN02887 515 LLNHLG------VSPDEIMAIGD-GENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIYRY 578 (580)
T ss_pred HHHHcC------CCHHHEEEEec-chhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHHh
Confidence 999999 88999999999 9999 999 9999999998754 3333322 22355555544
|
|
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.7e-20 Score=201.80 Aligned_cols=280 Identities=20% Similarity=0.162 Sum_probs=192.2
Q ss_pred CCCEEEEeCccch----hHHHHHH-hcCCCCeEEEEEecCCCChhhhhcCCccHHHHH-hhhcCCEEEEecHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLM----FLPKCLK-EYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLR-AVLAADLVGFHTYDYARHFVS 304 (844)
Q Consensus 231 ~~DiVwvHDyhl~----llp~~lr-~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~-~ll~aDlIgf~t~~~~~~Fl~ 304 (844)
..|+|++|+++-. ......+ ....+.|+.+.+|...+.... .....+.+ .+-.+|.|.+.+.+.++.+..
T Consensus 76 ~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~----~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 151 (366)
T cd03822 76 GPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPR----PGDRALLRLLLRRADAVIVMSSELLRALLL 151 (366)
T ss_pred CCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccc----hhhhHHHHHHHhcCCEEEEeeHHHHHHHHh
Confidence 4589999873311 1111111 123688999999986222111 11122222 234689999886444444432
Q ss_pred HHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHH
Q 003145 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 384 (844)
Q Consensus 305 ~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A 384 (844)
. . ...++.++|+|+|...+..... . + ......++++|+++||+.+.||+..+++|
T Consensus 152 ~----------------~-~~~~~~~i~~~~~~~~~~~~~~------~-~-~~~~~~~~~~i~~~G~~~~~K~~~~ll~a 206 (366)
T cd03822 152 R----------------A-YPEKIAVIPHGVPDPPAEPPES------L-K-ALGGLDGRPVLLTFGLLRPYKGLELLLEA 206 (366)
T ss_pred h----------------c-CCCcEEEeCCCCcCcccCCchh------h-H-hhcCCCCCeEEEEEeeccCCCCHHHHHHH
Confidence 1 0 0247889999999876643210 0 1 11112467899999999999999999999
Q ss_pred HHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEE
Q 003145 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (844)
Q Consensus 385 f~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v 464 (844)
++.+.+++|++ .|+++|.... +.........+++.+.+.. ..|.++.+.++.+++..+|+.||+++
T Consensus 207 ~~~~~~~~~~~----~l~i~G~~~~----~~~~~~~~~~~~i~~~~~~------~~v~~~~~~~~~~~~~~~~~~ad~~v 272 (366)
T cd03822 207 LPLLVAKHPDV----RLLVAGETHP----DLERYRGEAYALAERLGLA------DRVIFINRYLPDEELPELFSAADVVV 272 (366)
T ss_pred HHHHHhhCCCe----EEEEeccCcc----chhhhhhhhHhHHHhcCCC------CcEEEecCcCCHHHHHHHHhhcCEEE
Confidence 99998887764 4887764321 1111111100223332211 13665445599999999999999999
Q ss_pred EcCCCc--CCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 003145 465 VTSLRD--GMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (844)
Q Consensus 465 ~~S~~E--G~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~ 540 (844)
+||..| |++++++|||||| .|+|+|+.+| .+.+ +.+|+++++.|+++++++|.++++++ +.+.++.++++
T Consensus 273 ~ps~~e~~~~~~~~~Ea~a~G----~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~-~~~~~~~~~~~ 346 (366)
T cd03822 273 LPYRSADQTQSGVLAYAIGFG----KPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADP-ELAQALRARAR 346 (366)
T ss_pred ecccccccccchHHHHHHHcC----CCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcCh-HHHHHHHHHHH
Confidence 999999 9999999999996 7899999888 6666 56799999999999999999999865 46677788888
Q ss_pred HHHHhcCHHHHHHHHHHHH
Q 003145 541 THVTTHTAQEWAETFVSEL 559 (844)
Q Consensus 541 ~~v~~~~~~~W~~~fl~~l 559 (844)
+++++++++.+++.+++.+
T Consensus 347 ~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 347 EYARAMSWERVAERYLRLL 365 (366)
T ss_pred HHHhhCCHHHHHHHHHHHh
Confidence 9998899999999887654
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.2e-20 Score=205.02 Aligned_cols=268 Identities=19% Similarity=0.148 Sum_probs=187.3
Q ss_pred CCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCC-CChhhhhcCCc---cHHHHHhhhcCCEEEEecHHHHHHHHH
Q 003145 229 YKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPF-PSSEIHRTLPS---RSDLLRAVLAADLVGFHTYDYARHFVS 304 (844)
Q Consensus 229 ~~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pf-p~~e~~r~lp~---r~~ll~~ll~aDlIgf~t~~~~~~Fl~ 304 (844)
..+.|+|++|-.+.... .+.......++..++|... .....-...++ .+.++..+-.+|.|.+.+..-.+.+..
T Consensus 97 ~~~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~l~~ 174 (372)
T cd04949 97 DTKPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKVDGVIVATEQQKQDLQK 174 (372)
T ss_pred CCCCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhhCCEEEEccHHHHHHHHH
Confidence 46789999987776655 2233334556667777532 11110001112 244555566789898888765555533
Q ss_pred HHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHH
Q 003145 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 384 (844)
Q Consensus 305 ~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A 384 (844)
. ++ ...++.++|+|+|...+.+.. .....+..|+++||+.+.||+..+|+|
T Consensus 175 ~----~~------------~~~~v~~ip~g~~~~~~~~~~-------------~~~~~~~~i~~vgrl~~~K~~~~li~a 225 (372)
T cd04949 175 Q----FG------------NYNPIYTIPVGSIDPLKLPAQ-------------FKQRKPHKIITVARLAPEKQLDQLIKA 225 (372)
T ss_pred H----hC------------CCCceEEEcccccChhhcccc-------------hhhcCCCeEEEEEccCcccCHHHHHHH
Confidence 1 11 112378999999988765321 011356789999999999999999999
Q ss_pred HHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEE
Q 003145 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (844)
Q Consensus 385 f~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v 464 (844)
+.++.+++|+++ |+++|.+. ....++ .++.+.+.. . .|. +.|. .+++..+|+.||++|
T Consensus 226 ~~~l~~~~~~~~----l~i~G~g~-----~~~~~~----~~~~~~~~~----~--~v~-~~g~--~~~~~~~~~~ad~~v 283 (372)
T cd04949 226 FAKVVKQVPDAT----LDIYGYGD-----EEEKLK----ELIEELGLE----D--YVF-LKGY--TRDLDEVYQKAQLSL 283 (372)
T ss_pred HHHHHHhCCCcE----EEEEEeCc-----hHHHHH----HHHHHcCCc----c--eEE-EcCC--CCCHHHHHhhhhEEE
Confidence 999999998754 77777532 222232 233332221 1 244 4663 467999999999999
Q ss_pred EcCCCcCCChhHhhhhhcccCCCceEEEeCCC-Cchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 003145 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFA-GAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 541 (844)
Q Consensus 465 ~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~-G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~ 541 (844)
+||..||||++++|||+|| .|+|+|+.+ |..+.+ |.+|++++|.|++++|++|..+++++ +.+.++.+++++
T Consensus 284 ~~S~~Eg~~~~~lEAma~G----~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~ 358 (372)
T cd04949 284 LTSQSEGFGLSLMEALSHG----LPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAEAIIELLNDP-KLLQKFSEAAYE 358 (372)
T ss_pred ecccccccChHHHHHHhCC----CCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHHHHHHHHcCH-HHHHHHHHHHHH
Confidence 9999999999999999996 789999876 677776 67899999999999999999999875 567777788888
Q ss_pred HHHhcCHHHHHHH
Q 003145 542 HVTTHTAQEWAET 554 (844)
Q Consensus 542 ~v~~~~~~~W~~~ 554 (844)
...++++..++++
T Consensus 359 ~~~~~s~~~~~~~ 371 (372)
T cd04949 359 NAERYSEENVWEK 371 (372)
T ss_pred HHHHhhHHHHHhc
Confidence 8888888887764
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-20 Score=196.67 Aligned_cols=188 Identities=19% Similarity=0.235 Sum_probs=126.5
Q ss_pred EEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC--ceEEeecceE
Q 003145 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGMF 671 (844)
Q Consensus 594 i~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--l~liaenG~~ 671 (844)
|++|+||||++. ...++++++++|++|++ .|+.|+++|||+...+.+++..++ .++|++||++
T Consensus 1 i~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~ 65 (225)
T TIGR01482 1 IASDIDGTLTDP--------------NRAINESALEAIRKAES-VGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGE 65 (225)
T ss_pred CeEeccCccCCC--------------CcccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcE
Confidence 589999999976 34589999999999987 699999999999999998888774 5799999999
Q ss_pred EEecCC---eeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHHHHHHHHhcCCCCC
Q 003145 672 LRCTTG---KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN 748 (844)
Q Consensus 672 i~~~~~---~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~ 748 (844)
+...++ .|... .+..|................-.+. ............+++ .+.++.+++ .
T Consensus 66 i~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~----~~~~~~~~~------~ 129 (225)
T TIGR01482 66 ISYNEGMDDIFLAY----LEEEWFLDIVIAKTFPFSRLKVQYP--RRASLVKMRYGIDVD----TVREIIKEL------G 129 (225)
T ss_pred EEeCCCCceEEecc----cCHHHHHHHHHhcccchhhhccccc--cccceEEEeecCCHH----HHHHHHHhc------C
Confidence 986332 24332 2334433211111000000000000 011111111111222 223333333 1
Q ss_pred CCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcc
Q 003145 749 ASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSL 819 (844)
Q Consensus 749 ~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~ 819 (844)
..+.+.++..++||.|+++|||.|+++++++++ ++.+++++||| +.|| ||+ +++|+||||.+++
T Consensus 130 ~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~------i~~~~~i~~GD-~~NDi~m~~~ag~~vam~Na~~~~ 197 (225)
T TIGR01482 130 LNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLG------IKPGETLVCGD-SENDIDLFEVPGFGVAVANAQPEL 197 (225)
T ss_pred ceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhC------CCHHHEEEECC-CHhhHHHHHhcCceEEcCChhHHH
Confidence 123334556799999999999999999999998 78899999999 9999 998 8999999998765
|
catalyze the same reaction as SPP. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.2e-19 Score=197.35 Aligned_cols=267 Identities=19% Similarity=0.158 Sum_probs=192.5
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHh
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (844)
..|+|++|..+...+..++..+....++.+.+|.+-.... +....+...+-.+|.+...+....+.+.+. .
T Consensus 79 ~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~vi~~s~~~~~~l~~~----~ 149 (355)
T cd03799 79 GIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRS-----PDAIDLDEKLARADFVVAISEYNRQQLIRL----L 149 (355)
T ss_pred CCCEEEECCCCchHHHHHHHHHhcCCCEEEEEeccccccc-----CchHHHHHHHhhCCEEEECCHHHHHHHHHh----c
Confidence 4699999987665555555555557888888885421111 000223334457999998887666655331 1
Q ss_pred CcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHH
Q 003145 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (844)
Q Consensus 311 ~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~ 390 (844)
+ ....++.++|+|+|.+.|.+.. .....++..|+++||+.+.||+..+++|++.+.+
T Consensus 150 ~-----------~~~~~~~vi~~~~d~~~~~~~~------------~~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~ 206 (355)
T cd03799 150 G-----------CDPDKIHVVHCGVDLERFPPRP------------PPPPGEPLRILSVGRLVEKKGLDYLLEALALLKD 206 (355)
T ss_pred C-----------CCcccEEEEeCCcCHHHcCCcc------------ccccCCCeEEEEEeeeccccCHHHHHHHHHHHhh
Confidence 1 1245788999999998875421 0112456789999999999999999999999877
Q ss_pred hCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCC-
Q 003145 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR- 469 (844)
Q Consensus 391 ~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~- 469 (844)
..|+ +.|+++|.. +.. .++.+.+.+.+. .+.+.+.|.++.+++..+|+.||++++||..
T Consensus 207 ~~~~----~~l~i~G~~-----~~~----~~~~~~~~~~~~-------~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~ 266 (355)
T cd03799 207 RGID----FRLDIVGDG-----PLR----DELEALIAELGL-------EDRVTLLGAKSQEEVRELLRAADLFVLPSVTA 266 (355)
T ss_pred cCCC----eEEEEEECC-----ccH----HHHHHHHHHcCC-------CCeEEECCcCChHHHHHHHHhCCEEEecceec
Confidence 6554 558777642 222 233333333321 1233458999999999999999999999999
Q ss_pred -----cCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 003145 470 -----DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542 (844)
Q Consensus 470 -----EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~ 542 (844)
||||++++|||+|| .|+|+|..+|..+.+ +.+|++++|.|+++++++|.++++++. ++..+.+++++.
T Consensus 267 ~~~~~e~~~~~~~Ea~a~G----~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~-~~~~~~~~a~~~ 341 (355)
T cd03799 267 ADGDREGLPVVLMEAMAMG----LPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLDDPE-LRREMGEAGRAR 341 (355)
T ss_pred CCCCccCccHHHHHHHHcC----CCEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHH
Confidence 99999999999996 789999988887777 447999999999999999999998754 567777777777
Q ss_pred H-HhcCHHHHHHH
Q 003145 543 V-TTHTAQEWAET 554 (844)
Q Consensus 543 v-~~~~~~~W~~~ 554 (844)
+ +.|++...++.
T Consensus 342 ~~~~~s~~~~~~~ 354 (355)
T cd03799 342 VEEEFDIRKQAAR 354 (355)
T ss_pred HHHhcCHHHHhhc
Confidence 6 56788776653
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.4e-19 Score=195.63 Aligned_cols=279 Identities=19% Similarity=0.176 Sum_probs=193.8
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCC-ccHHHHHhh-hcCCEEEEecHHHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLP-SRSDLLRAV-LAADLVGFHTYDYARHFVSACTR 308 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp-~r~~ll~~l-l~aDlIgf~t~~~~~~Fl~~~~~ 308 (844)
..|+|++|+++...............++.+..|..++... ...+ ....+..-+ -.+|.+...+......+...
T Consensus 80 ~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~--- 154 (365)
T cd03807 80 RPDVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLG--KKSTRLVARLRRLLSSFIPLIVANSAAAAEYHQAI--- 154 (365)
T ss_pred CCCEEEeccccccHHHHHHHHhcCCCcEEEEecCCccccc--chhHhHHHHHHHHhccccCeEEeccHHHHHHHHHc---
Confidence 4699999999987777776665568889999998665421 0001 111222222 23566655554333332220
Q ss_pred HhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccccCCHHHHHHHH
Q 003145 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAF 385 (844)
Q Consensus 309 ~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~l~Af 385 (844)
+. ...++.++|+|+|...|.+... ....+++++ .++++|+++||+.+.||+..+++|+
T Consensus 155 --~~-----------~~~~~~vi~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~ 215 (365)
T cd03807 155 --GY-----------PPKKIVVIPNGVDTERFSPDLD------ARARLREELGLPEDTFLIGIVARLHPQKDHATLLRAA 215 (365)
T ss_pred --CC-----------ChhheeEeCCCcCHHhcCCccc------chHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHH
Confidence 11 2346788999999988764321 112233444 3567899999999999999999999
Q ss_pred HHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEE
Q 003145 386 EKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALV 465 (844)
Q Consensus 386 ~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~ 465 (844)
..+.+++|+ +.|+++|.+. ....++.... ...+ ... .|.+ .+. .+++..+|+.||++++
T Consensus 216 ~~l~~~~~~----~~l~i~G~~~-----~~~~~~~~~~---~~~~----~~~--~v~~-~g~--~~~~~~~~~~adi~v~ 274 (365)
T cd03807 216 ALLLKKFPN----ARLLLVGDGP-----DRANLELLAL---KELG----LED--KVIL-LGE--RSDVPALLNALDVFVL 274 (365)
T ss_pred HHHHHhCCC----eEEEEecCCc-----chhHHHHHHH---HhcC----CCc--eEEE-ccc--cccHHHHHHhCCEEEe
Confidence 999888776 4587776532 1111221111 1211 111 2443 553 4689999999999999
Q ss_pred cCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-H
Q 003145 466 TSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-T 544 (844)
Q Consensus 466 ~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~ 544 (844)
||..||+|++++|||+|| .|+|+|+.+|..+.+..+|+++++.|+++++++|.++++++ +++.++.+++++++ +
T Consensus 275 ps~~e~~~~~~~Ea~a~g----~PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~ 349 (365)
T cd03807 275 SSLSEGFPNVLLEAMACG----LPVVATDVGDNAELVGDTGFLVPPGDPEALAEAIEALLADP-ALRQALGEAARERIEE 349 (365)
T ss_pred CCccccCCcHHHHHHhcC----CCEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHHHHHHhCh-HHHHHHHHHHHHHHHH
Confidence 999999999999999996 79999999998888855799999999999999999999976 56777777888877 5
Q ss_pred hcCHHHHHHHHHHHH
Q 003145 545 THTAQEWAETFVSEL 559 (844)
Q Consensus 545 ~~~~~~W~~~fl~~l 559 (844)
.+++...++.+++.+
T Consensus 350 ~~s~~~~~~~~~~~y 364 (365)
T cd03807 350 NFSIEAMVEAYEELY 364 (365)
T ss_pred hCCHHHHHHHHHHHh
Confidence 689999999887654
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.8e-20 Score=207.26 Aligned_cols=186 Identities=12% Similarity=0.032 Sum_probs=136.2
Q ss_pred EecccChhHHhhhhcCCchHHHHHHHHHHh-C-C--CcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEc
Q 003145 331 FPIGIDSERFIRALEINPVQVHIKELQETF-A-G--RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAV 406 (844)
Q Consensus 331 ~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~-~--~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~ 406 (844)
.+.|||++.|.+.... +++.+ + + .+++++||||.+.||+..+|+|+..+.+..|++ .|+++|
T Consensus 201 ~v~GVd~~~f~~~~~~---------~~~~~~~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~----~l~ivG- 266 (462)
T PLN02846 201 NVHGVNPKFLEIGKLK---------LEQQKNGEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGL----EVDLYG- 266 (462)
T ss_pred cCceechhhcCCCccc---------HhhhcCCCCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCe----EEEEEC-
Confidence 4589999988754221 11122 2 2 357999999999999999999999988877864 488775
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCC
Q 003145 407 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLK 486 (844)
Q Consensus 407 p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~ 486 (844)
+||+.++|++. +.+++. .+.+|.|..+.+ .+|+.+||||+||.+||||+|++||||||
T Consensus 267 ----dGp~~~~L~~~----a~~l~l--------~~~vf~G~~~~~---~~~~~~DvFv~pS~~Et~g~v~lEAmA~G--- 324 (462)
T PLN02846 267 ----SGEDSDEVKAA----AEKLEL--------DVRVYPGRDHAD---PLFHDYKVFLNPSTTDVVCTTTAEALAMG--- 324 (462)
T ss_pred ----CCccHHHHHHH----HHhcCC--------cEEEECCCCCHH---HHHHhCCEEEECCCcccchHHHHHHHHcC---
Confidence 45665555544 443321 234467765554 58999999999999999999999999996
Q ss_pred CceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 003145 487 KGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (844)
Q Consensus 487 ~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (844)
.|+|+++..| .+.+ +.+|+++ .|.++++++|.++|..+++++.. + ..+.++|+.-+++|+..+.-.
T Consensus 325 -~PVVa~~~~~-~~~v~~~~ng~~~--~~~~~~a~ai~~~l~~~~~~~~~---~---a~~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 325 -KIVVCANHPS-NEFFKQFPNCRTY--DDGKGFVRATLKALAEEPAPLTD---A---QRHELSWEAATERFLRVADLD 392 (462)
T ss_pred -CcEEEecCCC-cceeecCCceEec--CCHHHHHHHHHHHHccCchhHHH---H---HHHhCCHHHHHHHHHHHhccC
Confidence 7888888776 5766 6788888 48999999999999865433211 1 224889999999998776543
|
|
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.2e-19 Score=195.83 Aligned_cols=191 Identities=17% Similarity=0.195 Sum_probs=145.6
Q ss_pred EecccChhHHhhhhcCCchHHHHHHHHHH----hCCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEc
Q 003145 331 FPIGIDSERFIRALEINPVQVHIKELQET----FAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAV 406 (844)
Q Consensus 331 ~P~GID~~~f~~~~~~~~~~~~~~~lr~~----~~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~ 406 (844)
+|+|||++.|.+... ...+++++ +.+..+|++|||+++.||+..+|+|++++.+++|++..++.|+++|.
T Consensus 118 I~~GVD~~~f~p~~~------~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~ 191 (335)
T PHA01633 118 VFHGINFKIVENAEK------LVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH 191 (335)
T ss_pred eeCCCChhhcCccch------hhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH
Confidence 678999999875321 11223333 34667899999999999999999999999999998766677776641
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeC--CCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhccc
Q 003145 407 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD--RSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD 484 (844)
Q Consensus 407 p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~--~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~ 484 (844)
.. +.++ + ..+ .|+++. |.++.+++.++|+.||+||+||..||||++++||||||
T Consensus 192 ------~~-------~~~l----~----l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G- 247 (335)
T PHA01633 192 ------KQ-------FTQL----E----VPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMG- 247 (335)
T ss_pred ------HH-------HHHc----C----CCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcC-
Confidence 11 1111 1 111 366532 67789999999999999999999999999999999996
Q ss_pred CCCceEEEeCCCCchhhcc------------------C--CeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 003145 485 LKKGVLILSEFAGAAQSLG------------------A--GAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (844)
Q Consensus 485 ~~~g~lVlSe~~G~~~~lg------------------~--~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~ 544 (844)
.|+|+|..+|..+..| . .|++++++|++++|++|.+++.++. +..|..++++..+
T Consensus 248 ---~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~--~~~~~~~~~~~a~ 322 (335)
T PHA01633 248 ---TPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQD--REERSMKLKELAK 322 (335)
T ss_pred ---CCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccC--hhhhhHHHHHHHH
Confidence 7899998887777543 1 2567889999999999999988763 3344556678999
Q ss_pred hcCHHHHHHHHH
Q 003145 545 THTAQEWAETFV 556 (844)
Q Consensus 545 ~~~~~~W~~~fl 556 (844)
+++++.-.++|+
T Consensus 323 ~f~~~~~~~~~~ 334 (335)
T PHA01633 323 KYDIRNLYTRFL 334 (335)
T ss_pred hcCHHHHHHHhh
Confidence 999998888775
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.8e-20 Score=199.44 Aligned_cols=222 Identities=16% Similarity=0.193 Sum_probs=149.5
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC----ceEEe
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN----LWLAA 666 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~----l~lia 666 (844)
+.||++|+||||++..+ .+...++++.++|+++.+ +|+.++++|||+...+..+...++ -.+|+
T Consensus 1 ~~li~tDlDGTLl~~~~-----------~~~~~~~~~~~~i~~~~~-~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~ 68 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTD-----------GDNQALLRLNALLEDHRG-EDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVT 68 (249)
T ss_pred CeEEEEcCCCcCcCCCC-----------CChHHHHHHHHHHHHhhc-cCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEE
Confidence 35899999999998421 134578999999999987 699999999999999998866552 24899
Q ss_pred ecceEEEecCC-----eeeecccccCChHHH-HHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHHHHHHH
Q 003145 667 ENGMFLRCTTG-----KWMTTMPEHLNMEWV-DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQH 740 (844)
Q Consensus 667 enG~~i~~~~~-----~w~~~~~~~~~~~w~-~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el~~~ 740 (844)
+||+.|..++. .|... ....|. +.+..+...+...++....+.+..++.+.....+. .....++.+.
T Consensus 69 ~NGa~I~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~---~~~~~~l~~~ 141 (249)
T TIGR01485 69 SVGSEIYYGGAEVPDQHWAEY----LSEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAA---PEVIKQLTEM 141 (249)
T ss_pred cCCceEEeCCCCcCCHHHHHH----HhcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechhhh---hHHHHHHHHH
Confidence 99999986331 12211 112233 23444444444444544445555666666432111 1112233333
Q ss_pred HhcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc---cCcEEEeC
Q 003145 741 LWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT---QFLIQVGS 814 (844)
Q Consensus 741 L~~~~~~~~~~~v-~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~---g~~Iavgn 814 (844)
+ .. . +..+.+ .+++.++||+|+++|||.|++.|++.++ ++.+.+++||| +.|| ||+ +.+|+|+|
T Consensus 142 l-~~-~-~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~------i~~~~~i~~GD-~~ND~~ml~~~~~~~va~~n 211 (249)
T TIGR01485 142 L-KE-T-GLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKLA------MEPSQTLVCGD-SGNDIELFEIGSVRGVIVSN 211 (249)
T ss_pred H-Hh-c-CCCEEEEEECCceEEEEeCCCChHHHHHHHHHHcC------CCccCEEEEEC-ChhHHHHHHccCCcEEEECC
Confidence 3 22 1 223444 5678899999999999999999999998 78899999999 9999 997 47999999
Q ss_pred CCCcchhh---------hcCCHHHHHHHHHHHhhcc
Q 003145 815 SINSLSKE---------KKRKVHQLFGIFLRFSYSG 841 (844)
Q Consensus 815 a~~~~a~~---------~l~~~~~v~~~l~~~~~~~ 841 (844)
|.+++.+. .+++-...-+|++.|-..|
T Consensus 212 a~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~~~ 247 (249)
T TIGR01485 212 AQEELLQWYDENAKDKIYHASERCAGGIIEAIAHFD 247 (249)
T ss_pred CHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHHcC
Confidence 99887653 1223333456666666555
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.2e-19 Score=195.89 Aligned_cols=272 Identities=20% Similarity=0.195 Sum_probs=187.9
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccH---------HHHH-hhhcCCEEEEecHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRS---------DLLR-AVLAADLVGFHTYDYAR 300 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~---------~ll~-~ll~aDlIgf~t~~~~~ 300 (844)
..|+|++|+............+..++++.+.+|.+++.. ....+... .+.+ .+..+|.|.+.+.....
T Consensus 84 ~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~ 161 (374)
T cd03817 84 GPDIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYEDY--THYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIAD 161 (374)
T ss_pred CCCEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHHH--HHHHhcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHH
Confidence 458999998654433333333345789999999887632 22211110 1112 23457888877765443
Q ss_pred HHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccccCC
Q 003145 301 HFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKG 377 (844)
Q Consensus 301 ~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KG 377 (844)
.+.. .+...++.++|+|+|...|.+... .. .++.+ .++++|+++||+.+.||
T Consensus 162 ~~~~-----------------~~~~~~~~vi~~~~~~~~~~~~~~----~~----~~~~~~~~~~~~~i~~~G~~~~~k~ 216 (374)
T cd03817 162 LLRE-----------------YGVKRPIEVIPTGIDLDRFEPVDG----DD----ERRKLGIPEDEPVLLYVGRLAKEKN 216 (374)
T ss_pred HHHh-----------------cCCCCceEEcCCccchhccCccch----hH----HHHhcCCCCCCeEEEEEeeeecccC
Confidence 3321 111235889999999987764321 01 12222 35778999999999999
Q ss_pred HHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHH
Q 003145 378 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY 457 (844)
Q Consensus 378 i~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly 457 (844)
+..+++|+..+.++.|+ +.|+++|.+ +.. ..+.+++.+.+.. ..|. +.|.++.+++..+|
T Consensus 217 ~~~l~~~~~~~~~~~~~----~~l~i~G~~-----~~~----~~~~~~~~~~~~~------~~v~-~~g~~~~~~~~~~~ 276 (374)
T cd03817 217 IDFLIRAFARLLKEEPD----VKLVIVGDG-----PER----EELEELARELGLA------DRVI-FTGFVPREELPDYY 276 (374)
T ss_pred HHHHHHHHHHHHHhCCC----eEEEEEeCC-----chH----HHHHHHHHHcCCC------CcEE-EeccCChHHHHHHH
Confidence 99999999999887665 558877642 222 2333444333221 1244 58999999999999
Q ss_pred HhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHH
Q 003145 458 AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKR 535 (844)
Q Consensus 458 ~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r 535 (844)
+.||++++||..||+|++++|||+|| .|+|+|..++..+.+ +.+|+++++.|. +++++|.++++++. .+.++
T Consensus 277 ~~ad~~l~~s~~e~~~~~~~Ea~~~g----~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~-~~~~~ 350 (374)
T cd03817 277 KAADLFVFASTTETQGLVLLEAMAAG----LPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPE-LRRRL 350 (374)
T ss_pred HHcCEEEecccccCcChHHHHHHHcC----CcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChH-HHHHH
Confidence 99999999999999999999999996 789999988888877 468999999888 99999999998765 45667
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHH
Q 003145 536 HWHNFTHVTTHTAQEWAETFVSE 558 (844)
Q Consensus 536 ~~~~~~~v~~~~~~~W~~~fl~~ 558 (844)
.++.++.+.+++ |++.+.+.
T Consensus 351 ~~~~~~~~~~~~---~~~~~~~~ 370 (374)
T cd03817 351 SKNAEESAEKFS---FAKKVEKL 370 (374)
T ss_pred HHHHHHHHHHHH---HHHHHHHH
Confidence 777788887766 44444433
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.84 E-value=6e-19 Score=192.74 Aligned_cols=279 Identities=23% Similarity=0.192 Sum_probs=200.9
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhh----cCCccHHHHHhhhcCCEEEEecHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR----TLPSRSDLLRAVLAADLVGFHTYDYARHFVSAC 306 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r----~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~ 306 (844)
..|+|++|+++...+.. +..+..+.++.+.+|.+++...... ...........+..+|.+.+.+....+.+.+.
T Consensus 85 ~~Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~- 162 (374)
T cd03801 85 RFDVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATREELREL- 162 (374)
T ss_pred CCcEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhc-
Confidence 46999999998887765 3444568999999999876532110 00011122233446788888877655554431
Q ss_pred HHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHH---hCCCcEEEEEecccccCCHHHHHH
Q 003145 307 TRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQET---FAGRKVMLGVDRLDMIKGIPQKLL 383 (844)
Q Consensus 307 ~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~---~~~~~vil~VdRld~~KGi~~~l~ 383 (844)
+.....++.++|+|+|...+.+.. ...+.. ..+++.|+++||+.+.||+..+++
T Consensus 163 --------------~~~~~~~~~~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~ 219 (374)
T cd03801 163 --------------GGVPPEKITVIPNGVDTERFRPAP---------RAARRRLGIPEDEPVILFVGRLVPRKGVDLLLE 219 (374)
T ss_pred --------------CCCCCCcEEEecCcccccccCccc---------hHHHhhcCCcCCCeEEEEecchhhhcCHHHHHH
Confidence 011124788999999988775321 111111 135688999999999999999999
Q ss_pred HHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEE
Q 003145 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (844)
Q Consensus 384 Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~ 463 (844)
|+..+.+++|+ +.|+++|. ++....++ +++.+.+.. ..|. +.|.++.+++..+|+.||++
T Consensus 220 ~~~~~~~~~~~----~~l~i~G~-----~~~~~~~~----~~~~~~~~~------~~v~-~~g~~~~~~~~~~~~~~di~ 279 (374)
T cd03801 220 ALAKLRKEYPD----VRLVIVGD-----GPLREELE----ALAAELGLG------DRVT-FLGFVPDEDLPALYAAADVF 279 (374)
T ss_pred HHHHHhhhcCC----eEEEEEeC-----cHHHHHHH----HHHHHhCCC------cceE-EEeccChhhHHHHHHhcCEE
Confidence 99999887765 55887762 23333333 333222211 1354 58999999999999999999
Q ss_pred EEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH-
Q 003145 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF- 540 (844)
Q Consensus 464 v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~- 540 (844)
++||..||+|++++|||+|| .|+|++..+|..+.+ +.+|+++++.|+++++++|.++++.+ +.+.++.++++
T Consensus 280 i~~~~~~~~~~~~~Ea~~~g----~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~-~~~~~~~~~~~~ 354 (374)
T cd03801 280 VLPSLYEGFGLVLLEAMAAG----LPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDP-ELRRRLGEAARE 354 (374)
T ss_pred EecchhccccchHHHHHHcC----CcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcCh-HHHHHHHHHHHH
Confidence 99999999999999999996 799999998888888 46799999999999999999999865 45666666666
Q ss_pred HHHHhcCHHHHHHHHHHHH
Q 003145 541 THVTTHTAQEWAETFVSEL 559 (844)
Q Consensus 541 ~~v~~~~~~~W~~~fl~~l 559 (844)
...+.++++.+++.+++.+
T Consensus 355 ~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 355 RVAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHHhcCHHHHHHHHHHhh
Confidence 4568899999999887654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.8e-19 Score=194.29 Aligned_cols=280 Identities=19% Similarity=0.174 Sum_probs=197.5
Q ss_pred CCCCCEEEEeC-ccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcC-C-------ccHHHHH-hhhcCCEEEEecHHH
Q 003145 229 YKDGDVVWCHD-YHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTL-P-------SRSDLLR-AVLAADLVGFHTYDY 298 (844)
Q Consensus 229 ~~~~DiVwvHD-yhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~l-p-------~r~~ll~-~ll~aDlIgf~t~~~ 298 (844)
....|+|++|. ..+..++........+.++.+.+|..+|........ . ....+.+ .+..+|.+.+.+...
T Consensus 97 ~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~ 176 (394)
T cd03794 97 RRRPDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGM 176 (394)
T ss_pred ccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECHHH
Confidence 34579999997 344445555444555889999999988754321111 1 1111222 244689999998877
Q ss_pred HHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCH
Q 003145 299 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGI 378 (844)
Q Consensus 299 ~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi 378 (844)
.+.+.. . .....++.++|+|+|...+.+..... .... .....++.+|+++||+.+.||+
T Consensus 177 ~~~~~~-----~-----------~~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~i~~~G~~~~~k~~ 235 (394)
T cd03794 177 REYLVR-----R-----------GVPPEKISVIPNGVDLELFKPPPADE----SLRK-ELGLDDKFVVLYAGNIGRAQGL 235 (394)
T ss_pred HHHHHh-----c-----------CCCcCceEEcCCCCCHHHcCCccchh----hhhh-ccCCCCcEEEEEecCcccccCH
Confidence 766541 1 11234788999999998776432110 0000 0112467899999999999999
Q ss_pred HHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHH
Q 003145 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 458 (844)
Q Consensus 379 ~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 458 (844)
..+++|+..+.+. |+ +.|+++|. ++....+++. +...+ ...|.+ .+.++.+++..+|+
T Consensus 236 ~~l~~~~~~l~~~-~~----~~l~i~G~-----~~~~~~~~~~----~~~~~-------~~~v~~-~g~~~~~~~~~~~~ 293 (394)
T cd03794 236 DTLLEAAALLKDR-PD----IRFLIVGD-----GPEKEELKEL----AKALG-------LDNVTF-LGRVPKEELPELLA 293 (394)
T ss_pred HHHHHHHHHHhhc-CC----eEEEEeCC-----cccHHHHHHH----HHHcC-------CCcEEE-eCCCChHHHHHHHH
Confidence 9999999998765 54 55777763 2323233322 21111 124665 67999999999999
Q ss_pred hCcEEEEcCCCcCC-----ChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHH
Q 003145 459 VTDVALVTSLRDGM-----NLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEE 531 (844)
Q Consensus 459 ~ADv~v~~S~~EG~-----~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~e 531 (844)
.||++++||..|++ +++++|||+|| .|+|+|..+|..+.+ +.+|+++++.|+++++++|.+++++ +++
T Consensus 294 ~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G----~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~-~~~ 368 (394)
T cd03794 294 AADVGLVPLKPGPAFEGVSPSKLFEYMAAG----KPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDD-PEE 368 (394)
T ss_pred hhCeeEEeccCcccccccCchHHHHHHHCC----CcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhC-hHH
Confidence 99999999999876 66689999996 899999999999888 3479999999999999999999965 457
Q ss_pred HHHHHHHHHHHHH-hcCHHHHHHHHH
Q 003145 532 REKRHWHNFTHVT-THTAQEWAETFV 556 (844)
Q Consensus 532 r~~r~~~~~~~v~-~~~~~~W~~~fl 556 (844)
+.++.+++++++. .|+++.+++.++
T Consensus 369 ~~~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 369 RAEMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred HHHHHHHHHHHHHHhhcHHHHHHhcC
Confidence 7778888888886 899999988763
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.5e-19 Score=199.69 Aligned_cols=264 Identities=14% Similarity=0.122 Sum_probs=177.6
Q ss_pred CCCEEEEeCccchhHHHHHHhc-CCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~-~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~ 309 (844)
..|+||+|+.....+...+++. ....++..+.|..++....+. ...+..+|.+...+..-.+.+..
T Consensus 84 ~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~~~~----- 150 (359)
T PRK09922 84 QPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQMMA----- 150 (359)
T ss_pred CCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHHHHH-----
Confidence 3599999998777666666654 233456666776544321111 11235688888777654444322
Q ss_pred hCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEeccc--ccCCHHHHHHHHHH
Q 003145 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLD--MIKGIPQKLLAFEK 387 (844)
Q Consensus 310 l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld--~~KGi~~~l~Af~~ 387 (844)
.+. ...++.++|+|||.+.+... .+ ...++++|+++||+. +.||+..+++|+.+
T Consensus 151 ~~~-----------~~~ki~vi~N~id~~~~~~~--~~-----------~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~ 206 (359)
T PRK09922 151 RGI-----------SAQRISVIYNPVEIKTIIIP--PP-----------ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQ 206 (359)
T ss_pred cCC-----------CHHHEEEEcCCCCHHHccCC--Cc-----------ccCCCcEEEEEEEEecccCcCHHHHHHHHHh
Confidence 121 12367889999997665321 11 012467899999996 46999999999987
Q ss_pred HHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCC--CHHHHHHHHHhCcEEEE
Q 003145 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL--DFPALCALYAVTDVALV 465 (844)
Q Consensus 388 ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v--~~~el~aly~~ADv~v~ 465 (844)
+. + ++.|+++|. +++.++ +++++++.+.. ..|. |.|.+ +.+++..+|+.||++|+
T Consensus 207 ~~---~----~~~l~ivG~-----g~~~~~----l~~~~~~~~l~------~~v~-f~G~~~~~~~~~~~~~~~~d~~v~ 263 (359)
T PRK09922 207 TT---G----EWQLHIIGD-----GSDFEK----CKAYSRELGIE------QRII-WHGWQSQPWEVVQQKIKNVSALLL 263 (359)
T ss_pred hC---C----CeEEEEEeC-----CccHHH----HHHHHHHcCCC------CeEE-EecccCCcHHHHHHHHhcCcEEEE
Confidence 52 2 466888874 333333 44444443321 1255 47765 45899999999999999
Q ss_pred cCCCcCCChhHhhhhhcccCCCceEEEeC-CCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 003145 466 TSLRDGMNLVSYEFVACQDLKKGVLILSE-FAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542 (844)
Q Consensus 466 ~S~~EG~~Lv~~Eama~~~~~~g~lVlSe-~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~ 542 (844)
||..||||++++|||||| .|+|+|+ .+|..+.+ |.+|++|+|.|++++|++|.++++.+.. | ......+.
T Consensus 264 ~s~~Egf~~~~lEAma~G----~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~~-~--~~~~~~~~ 336 (359)
T PRK09922 264 TSKFEGFPMTLLEAMSYG----IPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISGEVK-Y--QHDAIPNS 336 (359)
T ss_pred CCcccCcChHHHHHHHcC----CCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHHhCccc-C--CHHHHHHH
Confidence 999999999999999996 8999999 88888777 5689999999999999999999987742 1 12222334
Q ss_pred HHhcCHHHHHHHHHHHHHH
Q 003145 543 VTTHTAQEWAETFVSELND 561 (844)
Q Consensus 543 v~~~~~~~W~~~fl~~l~~ 561 (844)
+.++..+...+++...+..
T Consensus 337 ~~~~~~~~~~~~~~~~~~~ 355 (359)
T PRK09922 337 IERFYEVLYFKNLNNALFS 355 (359)
T ss_pred HHHhhHHHHHHHHHHHHHH
Confidence 5555556666666555544
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.4e-20 Score=196.99 Aligned_cols=217 Identities=15% Similarity=0.219 Sum_probs=138.5
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC--ceEEee
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAE 667 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--l~liae 667 (844)
+.|||++|+||||++. +..++++++++|++|.+ +|+.|+|+|||++..+.+.++.++ .++|++
T Consensus 2 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~~~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~ 66 (272)
T PRK10530 2 TYRVIALDLDGTLLTP--------------KKTILPESLEALARARE-AGYKVIIVTGRHHVAIHPFYQALALDTPAICC 66 (272)
T ss_pred CccEEEEeCCCceECC--------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCCEEEc
Confidence 3689999999999976 34689999999999998 699999999999999999998884 369999
Q ss_pred cceEEEe-cCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccce------------EEE----------Eeec
Q 003145 668 NGMFLRC-TTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETS------------LVW----------NYKY 724 (844)
Q Consensus 668 nG~~i~~-~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~s------------l~~----------hy~~ 724 (844)
||+.+.. .+++- +....++ .+.+.++++...+..-...+...+.. ..| .+..
T Consensus 67 NGa~i~d~~~~~~--l~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (272)
T PRK10530 67 NGTYLYDYQAKKV--LEADPLP---VQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQ 141 (272)
T ss_pred CCcEEEecCCCEE--EEecCCC---HHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEE
Confidence 9999985 23321 1111233 23444555443322111111000000 000 0000
Q ss_pred CCh--hh----h-----------HHHHHHHHHHHhcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcC
Q 003145 725 ADV--EF----G-----------RIQARDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKM 786 (844)
Q Consensus 725 ~d~--e~----~-----------~~qa~el~~~L~~~~~~~~~~~v-~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~ 786 (844)
.+. +. . .....++.+.+ . ...++.+ .++..++||.|+++|||.|+++++++++
T Consensus 142 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~---~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~g----- 212 (272)
T PRK10530 142 VDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHV-E---HELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQG----- 212 (272)
T ss_pred cccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHH-h---hhcCceEEEecCceEEEecCCCChHHHHHHHHHHcC-----
Confidence 000 00 0 00112222333 1 1223333 3455689999999999999999999999
Q ss_pred CCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcc---hhhhcCCHHH--HHHHHHHH
Q 003145 787 KTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSL---SKEKKRKVHQ--LFGIFLRF 837 (844)
Q Consensus 787 ~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~---a~~~l~~~~~--v~~~l~~~ 837 (844)
++++++++||| +.|| |++ |++|+|||+.+++ |.+...+.++ |..+|+++
T Consensus 213 -i~~~e~i~~GD-~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~ 270 (272)
T PRK10530 213 -WSMKNVVAFGD-NFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIYSH 270 (272)
T ss_pred -CCHHHeEEeCC-ChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHHHH
Confidence 78899999999 9999 998 8999999997764 3444433332 55555554
|
|
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=7e-19 Score=193.13 Aligned_cols=282 Identities=23% Similarity=0.216 Sum_probs=196.7
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHH
Q 003145 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (844)
Q Consensus 230 ~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~ 309 (844)
...|+|++|......+......+..+.++.+..|.+++....... ..+......+..+|.+.+.+......+.+..
T Consensus 92 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~--- 167 (377)
T cd03798 92 FRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG--- 167 (377)
T ss_pred CCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc---
Confidence 356999999655444433333334457899999987654321111 1122233345578999988876666554311
Q ss_pred hCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHH
Q 003145 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 389 (844)
Q Consensus 310 l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll 389 (844)
....++.++|+|+|...|.+... .....+ ....++++|+++||+.+.||+..+++|++.+.
T Consensus 168 -------------~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~ 228 (377)
T cd03798 168 -------------IDPEKVTVIPNGVDTERFSPADR-----AEARKL-GLPEDKKVILFVGRLVPRKGIDYLIEALARLL 228 (377)
T ss_pred -------------CCCCceEEcCCCcCcccCCCcch-----HHHHhc-cCCCCceEEEEeccCccccCHHHHHHHHHHHH
Confidence 12346889999999987764311 000111 11246788999999999999999999999998
Q ss_pred HhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCC
Q 003145 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR 469 (844)
Q Consensus 390 ~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~ 469 (844)
+++|+ +.|+++|.+ +....++ +++...+. .+.+.+.|.++.+++..+|+.||++++||..
T Consensus 229 ~~~~~----~~l~i~g~~-----~~~~~~~----~~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~ 288 (377)
T cd03798 229 KKRPD----VHLVIVGDG-----PLREALE----ALAAELGL-------EDRVTFLGAVPHEEVPAYYAAADVFVLPSLR 288 (377)
T ss_pred hcCCC----eEEEEEcCC-----cchHHHH----HHHHhcCC-------cceEEEeCCCCHHHHHHHHHhcCeeecchhh
Confidence 77665 457766532 2222233 33332221 1333458999999999999999999999999
Q ss_pred cCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH-HHHHhc
Q 003145 470 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF-THVTTH 546 (844)
Q Consensus 470 EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~-~~v~~~ 546 (844)
||+|++++|||+|| .|+|+|+.+|..+.+ +.+|+++++.|+++++++|.++++++.. ++..+++ ...+.+
T Consensus 289 ~~~~~~~~Ea~~~G----~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~---~~~~~~~~~~~~~~ 361 (377)
T cd03798 289 EGFGLVLLEAMACG----LPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADPWL---RLGRAARRRVAERF 361 (377)
T ss_pred ccCChHHHHHHhcC----CCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcHH---HHhHHHHHHHHHHh
Confidence 99999999999996 799999998888877 4567999999999999999999998754 4444444 445788
Q ss_pred CHHHHHHHHHHHHHH
Q 003145 547 TAQEWAETFVSELND 561 (844)
Q Consensus 547 ~~~~W~~~fl~~l~~ 561 (844)
++..+++.+.+.+++
T Consensus 362 s~~~~~~~~~~~~~~ 376 (377)
T cd03798 362 SWENVAERLLELYRE 376 (377)
T ss_pred hHHHHHHHHHHHHhh
Confidence 999999988877654
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.3e-19 Score=196.74 Aligned_cols=272 Identities=23% Similarity=0.193 Sum_probs=192.6
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCcc----HHHHHh-hhcCCEEEEecHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR----SDLLRA-VLAADLVGFHTYDYARHFVSA 305 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r----~~ll~~-ll~aDlIgf~t~~~~~~Fl~~ 305 (844)
..|+|++|.............+..++|+.+++|..||..-........ ..+.+. .-.+|.+.+.+......+..
T Consensus 83 ~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~- 161 (364)
T cd03814 83 APDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLADELRA- 161 (364)
T ss_pred CCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHHHHhc-
Confidence 459999986544322222222334788999999887633211111111 122222 23578888777655442211
Q ss_pred HHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh--CCCcEEEEEecccccCCHHHHHH
Q 003145 306 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKVMLGVDRLDMIKGIPQKLL 383 (844)
Q Consensus 306 ~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~VdRld~~KGi~~~l~ 383 (844)
. ...++.++|+|+|.+.|.+..... ..++.+ .++++|+++||+.+.||+..+++
T Consensus 162 ---------------~--~~~~~~~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~~i~~~G~~~~~k~~~~~i~ 217 (364)
T cd03814 162 ---------------R--GFRRVRLWPRGVDTELFHPRRRDE-------ALRARLGPPDRPVLLYVGRLAPEKNLEALLD 217 (364)
T ss_pred ---------------c--CCCceeecCCCccccccCcccccH-------HHHHHhCCCCCeEEEEEeccccccCHHHHHH
Confidence 0 123578899999998876532211 112222 35788999999999999999999
Q ss_pred HHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEE
Q 003145 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (844)
Q Consensus 384 Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~ 463 (844)
|+..+.++ |++ .|+++|.+ ++...++ ..+ ..|.+ .|.++.+++..+|+.||++
T Consensus 218 ~~~~l~~~-~~~----~l~i~G~~-----~~~~~~~--------~~~--------~~v~~-~g~~~~~~~~~~~~~~d~~ 270 (364)
T cd03814 218 ADLPLRRR-PPV----RLVIVGDG-----PARARLE--------ARY--------PNVHF-LGFLDGEELAAAYASADVF 270 (364)
T ss_pred HHHHhhhc-CCc----eEEEEeCC-----chHHHHh--------ccC--------CcEEE-EeccCHHHHHHHHHhCCEE
Confidence 99998776 654 48777642 2221221 101 13554 7789999999999999999
Q ss_pred EEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 003145 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 541 (844)
Q Consensus 464 v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~ 541 (844)
++||..||||++++|||||| .|+|+|+.+|..+.+ +..|++++|.|.++++++|.+++..+ +++.++...+++
T Consensus 271 l~~s~~e~~~~~~lEa~a~g----~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~ 345 (364)
T cd03814 271 VFPSRTETFGLVVLEAMASG----LPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADP-ELRRRMAARARA 345 (364)
T ss_pred EECcccccCCcHHHHHHHcC----CCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHH
Confidence 99999999999999999996 799999999988887 35799999999999999999999865 577777888888
Q ss_pred HHHhcCHHHHHHHHHHHH
Q 003145 542 HVTTHTAQEWAETFVSEL 559 (844)
Q Consensus 542 ~v~~~~~~~W~~~fl~~l 559 (844)
.++.+++..+++.+++.+
T Consensus 346 ~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 346 EAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHhhcCHHHHHHHHHHhh
Confidence 888999999999888654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.8e-19 Score=191.13 Aligned_cols=262 Identities=17% Similarity=0.102 Sum_probs=182.4
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHh
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (844)
..|+|++|+.+...+...+... ..++.+..|..++...... .+.......+-.+|.+.+.+......+
T Consensus 83 ~~d~i~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~-------- 150 (348)
T cd03820 83 KPDVVISFLTSLLTFLASLGLK--IVKLIVSEHNSPDAYKKRL--RRLLLRRLLYRRADAVVVLTEEDRALY-------- 150 (348)
T ss_pred CCCEEEEcCchHHHHHHHHhhc--cccEEEecCCCccchhhhh--HHHHHHHHHHhcCCEEEEeCHHHHHHh--------
Confidence 5699999988722222222221 1478888887765332111 011112233446888888776543110
Q ss_pred CcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHH
Q 003145 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (844)
Q Consensus 311 ~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~ 390 (844)
......++.++|+|+|...+.+. ...+++.++++||+.+.||+..+++|+..+.+
T Consensus 151 ----------~~~~~~~~~vi~~~~~~~~~~~~---------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~ 205 (348)
T cd03820 151 ----------YKKFNKNVVVIPNPLPFPPEEPS---------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIAK 205 (348)
T ss_pred ----------hccCCCCeEEecCCcChhhcccc---------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHHh
Confidence 01123468899999998765432 11357899999999999999999999999988
Q ss_pred hCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCc
Q 003145 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRD 470 (844)
Q Consensus 391 ~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~E 470 (844)
..|++ .|+++|.+ ++... +.+++.+.+. .+.+.+.+. .+++..+|+.||++++||..|
T Consensus 206 ~~~~~----~l~i~G~~-----~~~~~----~~~~~~~~~~-------~~~v~~~g~--~~~~~~~~~~ad~~i~ps~~e 263 (348)
T cd03820 206 KHPDW----KLRIVGDG-----PEREA----LEALIKELGL-------EDRVILLGF--TKNIEEYYAKASIFVLTSRFE 263 (348)
T ss_pred cCCCe----EEEEEeCC-----CCHHH----HHHHHHHcCC-------CCeEEEcCC--cchHHHHHHhCCEEEeCcccc
Confidence 77764 47777642 22222 2333333332 123334665 689999999999999999999
Q ss_pred CCChhHhhhhhcccCCCceEEEeCCCCchhhc---cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcC
Q 003145 471 GMNLVSYEFVACQDLKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 547 (844)
Q Consensus 471 G~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l---g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 547 (844)
|||++++|||+|| .|+|+|+..|..+.+ +.+|+++++.|+++++++|.++++++ +.+.++.+++++.+++++
T Consensus 264 ~~~~~~~Ea~a~G----~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~ 338 (348)
T cd03820 264 GFPMVLLEAMAFG----LPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDE-ELRKRMGANARESAERFS 338 (348)
T ss_pred ccCHHHHHHHHcC----CCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhC
Confidence 9999999999996 789999876655544 34899999999999999999999864 466667777788889999
Q ss_pred HHHHHHHHH
Q 003145 548 AQEWAETFV 556 (844)
Q Consensus 548 ~~~W~~~fl 556 (844)
++..+++|.
T Consensus 339 ~~~~~~~~~ 347 (348)
T cd03820 339 IENIIKQWE 347 (348)
T ss_pred HHHHHHHhc
Confidence 999988774
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.5e-18 Score=197.27 Aligned_cols=279 Identities=17% Similarity=0.144 Sum_probs=180.0
Q ss_pred HHHHHHHHhhC--CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhc------CCccH----------H
Q 003145 219 QMFADVVNKHY--KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRT------LPSRS----------D 280 (844)
Q Consensus 219 ~~fa~~i~~~~--~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~------lp~r~----------~ 280 (844)
..+...+.+.. .+-|+|++|...+ +.++..+..++|..+..|--. ++.+.. .|.+. .
T Consensus 90 ~~~~~~l~~~~~~~~~D~v~~~~~~~---~~~~~~~~~~~p~i~~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (397)
T TIGR03087 90 RRLARWVNALLAAEPVDAIVVFSSAM---AQYVTPHVRGVPRIVDFVDVD--SDKWLQYARTKRWPLRWIYRREGRLLLA 164 (397)
T ss_pred HHHHHHHHHHHhhCCCCEEEEecccc---ceeccccccCCCeEeehhhHH--HHHHHHHHhccCcchhHHHHHHHHHHHH
Confidence 34444555554 3469999985433 333432334667777776421 111111 11110 0
Q ss_pred HHH-hhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHH
Q 003145 281 LLR-AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQET 359 (844)
Q Consensus 281 ll~-~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~ 359 (844)
+-+ .+-.+|.|.+.+....+.+.+ .. .....++.++|+|||.+.|.+....+ ..
T Consensus 165 ~e~~~~~~ad~vi~~S~~~~~~l~~----~~-----------~~~~~~v~vipngvd~~~f~~~~~~~----------~~ 219 (397)
T TIGR03087 165 YERAIAARFDAATFVSRAEAELFRR----LA-----------PEAAGRITAFPNGVDADFFSPDRDYP----------NP 219 (397)
T ss_pred HHHHHHhhCCeEEEcCHHHHHHHHH----hC-----------CCCCCCeEEeecccchhhcCCCcccc----------CC
Confidence 111 123567777777655544432 10 11234688999999999886532110 01
Q ss_pred h-CCCcEEEEEecccccCCHHHHH----HHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccC
Q 003145 360 F-AGRKVMLGVDRLDMIKGIPQKL----LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFG 434 (844)
Q Consensus 360 ~-~~~~vil~VdRld~~KGi~~~l----~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g 434 (844)
+ .++++|+++||+++.||+..++ +++..+.+++|+++ |+++|.+ ++ . +++++.. .
T Consensus 220 ~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~----l~ivG~g-----~~-~----~~~~l~~----~-- 279 (397)
T TIGR03087 220 YPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAE----FYIVGAK-----PS-P----AVRALAA----L-- 279 (397)
T ss_pred CCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcE----EEEECCC-----Ch-H----HHHHhcc----C--
Confidence 1 3567999999999999999887 56666777778754 8877642 22 1 2222211 1
Q ss_pred CCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCC-CcCCChhHhhhhhcccCCCceEEEeCCCCchhhc-cCCeEEECCC
Q 003145 435 TLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-GAGAILVNPW 512 (844)
Q Consensus 435 ~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~-~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l-g~~g~lvnP~ 512 (844)
..|+ +.|.++ ++..+|+.||++|+||. .||++++++|||||| .|+|+|..++..... +..|+++. .
T Consensus 280 ----~~V~-~~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G----~PVV~t~~~~~~i~~~~~~g~lv~-~ 347 (397)
T TIGR03087 280 ----PGVT-VTGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMA----KPVVASPEAAEGIDALPGAELLVA-A 347 (397)
T ss_pred ----CCeE-EeeecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHcC----CCEEecCcccccccccCCcceEeC-C
Confidence 1255 478886 68999999999999997 599999999999996 788888764321111 34588885 8
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Q 003145 513 NITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELN 560 (844)
Q Consensus 513 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~ 560 (844)
|++++|++|.+++++ ++.+.++.+++++++ +.|+|+..++.+.+.+.
T Consensus 348 ~~~~la~ai~~ll~~-~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 348 DPADFAAAILALLAN-PAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred CHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 999999999999985 456777888888887 67999999998876654
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.5e-18 Score=199.91 Aligned_cols=264 Identities=11% Similarity=0.089 Sum_probs=165.5
Q ss_pred CCCEEEEeCc-cchhH--HHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHH--
Q 003145 231 DGDVVWCHDY-HLMFL--PKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSA-- 305 (844)
Q Consensus 231 ~~DiVwvHDy-hl~ll--p~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~-- 305 (844)
+.|+|++|.. ||-.. +....+++ + +++..+||.|+.+--...+..-+.++. .++.+|+..
T Consensus 434 ~PDVVHLatP~~LGw~~~Glr~ArKl-~-PVVasyHTny~eYl~~y~~g~L~~~ll-------------k~l~~~v~r~h 498 (794)
T PLN02501 434 DADIAILEEPEHLNWYHHGKRWTDKF-N-HVVGVVHTNYLEYIKREKNGALQAFFV-------------KHINNWVTRAY 498 (794)
T ss_pred CCCEEEECCchhhccHHHHHHHHHHc-C-CeEEEEeCCcHHHHhHhcchhHHHHHH-------------HHHHHHHHHhh
Confidence 5699999884 44444 23333333 3 688889999985322222222122111 122233332
Q ss_pred HHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhC---CCcEEEEEecccccCCHHHHH
Q 003145 306 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---GRKVMLGVDRLDMIKGIPQKL 382 (844)
Q Consensus 306 ~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~vil~VdRld~~KGi~~~l 382 (844)
|+.++.++..-.. +. ...|. ..+|||++.|.+.... ... ..++ ..+.+++||||.+.||+..+|
T Consensus 499 cD~VIaPS~atq~--L~--~~vI~-nVnGVDte~F~P~~r~-------~~~-r~lgi~~~~kgiLfVGRLa~EKGld~LL 565 (794)
T PLN02501 499 CHKVLRLSAATQD--LP--KSVIC-NVHGVNPKFLKIGEKV-------AEE-RELGQQAFSKGAYFLGKMVWAKGYRELI 565 (794)
T ss_pred CCEEEcCCHHHHH--hc--cccee-ecccccccccCCcchh-------HHH-HhcCCccccCceEEEEcccccCCHHHHH
Confidence 5555544311011 11 11111 1259999999864221 111 2221 235589999999999999999
Q ss_pred HHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcE
Q 003145 383 LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 462 (844)
Q Consensus 383 ~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv 462 (844)
+|+..+.++.|+ +.|+++| +||+.+++++ ++.+++. .|.| .|..+ +...+|+.+||
T Consensus 566 eAla~L~~~~pn----vrLvIVG-----DGP~reeLe~----la~eLgL--------~V~F-LG~~d--d~~~lyasaDV 621 (794)
T PLN02501 566 DLLAKHKNELDG----FNLDVFG-----NGEDAHEVQR----AAKRLDL--------NLNF-LKGRD--HADDSLHGYKV 621 (794)
T ss_pred HHHHHHHhhCCC----eEEEEEc-----CCccHHHHHH----HHHHcCC--------EEEe-cCCCC--CHHHHHHhCCE
Confidence 999998877776 4588786 3455444444 4443321 2554 45543 34479999999
Q ss_pred EEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 003145 463 ALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (844)
Q Consensus 463 ~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~ 540 (844)
||+||.+||||+|++|||||| .|+|+|+..|. +.+ |.+|++. .|.++++++|.++|.+++ .+..+ .
T Consensus 622 FVlPS~sEgFGlVlLEAMA~G----lPVVATd~pG~-e~V~~g~nGll~--~D~EafAeAI~~LLsd~~-~rl~~-~--- 689 (794)
T PLN02501 622 FINPSISDVLCTATAEALAMG----KFVVCADHPSN-EFFRSFPNCLTY--KTSEDFVAKVKEALANEP-QPLTP-E--- 689 (794)
T ss_pred EEECCCcccchHHHHHHHHcC----CCEEEecCCCC-ceEeecCCeEec--CCHHHHHHHHHHHHhCch-hhhHH-H---
Confidence 999999999999999999996 78999988774 334 4566654 789999999999999775 22221 1
Q ss_pred HHHHhcCHHHHHHHHHHHH
Q 003145 541 THVTTHTAQEWAETFVSEL 559 (844)
Q Consensus 541 ~~v~~~~~~~W~~~fl~~l 559 (844)
....++|..-+++++..-
T Consensus 690 -a~~~~SWeAaadrLle~~ 707 (794)
T PLN02501 690 -QRYNLSWEAATQRFMEYS 707 (794)
T ss_pred -HHhhCCHHHHHHHHHHhh
Confidence 134788888888887543
|
|
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.3e-18 Score=188.18 Aligned_cols=259 Identities=19% Similarity=0.201 Sum_probs=178.3
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHh
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (844)
..|+|++|.+..+.++.+...+..++|+.+++|-.++...... .+.. ..|.+...+....+.|..
T Consensus 96 ~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~~~~~------~~~~---~~d~ii~~s~~~~~~~~~------ 160 (359)
T cd03823 96 RPDVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLICPRQG------LFKK---GGDAVIAPSRFLLDRYVA------ 160 (359)
T ss_pred CCCEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeecchhh------hhcc---CCCEEEEeCHHHHHHHHH------
Confidence 3599999987555443332222346899999997654221111 1111 128887777655444432
Q ss_pred CcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHH
Q 003145 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (844)
Q Consensus 311 ~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~ 390 (844)
+.....++.++|+|+|...+.+... ....++.+|+++||+.+.||+..+++|+..+.+
T Consensus 161 ----------~~~~~~~~~vi~n~~~~~~~~~~~~------------~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~ 218 (359)
T cd03823 161 ----------NGLFAEKISVIRNGIDLDRAKRPRR------------APPGGRLRFGFIGQLTPHKGVDLLLEAFKRLPR 218 (359)
T ss_pred ----------cCCCccceEEecCCcChhhcccccc------------CCCCCceEEEEEecCccccCHHHHHHHHHHHHh
Confidence 0111357899999999987754211 012356789999999999999999999998866
Q ss_pred hCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCC-C
Q 003145 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-R 469 (844)
Q Consensus 391 ~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~-~ 469 (844)
++ +.|+++|... ......... ..+ ..|. +.|.++.+++..+|+.||++++||. .
T Consensus 219 --~~----~~l~i~G~~~-----~~~~~~~~~-----~~~--------~~v~-~~g~~~~~~~~~~~~~ad~~i~ps~~~ 273 (359)
T cd03823 219 --GD----IELVIVGNGL-----ELEEESYEL-----EGD--------PRVE-FLGAYPQEEIDDFYAEIDVLVVPSIWP 273 (359)
T ss_pred --cC----cEEEEEcCch-----hhhHHHHhh-----cCC--------CeEE-EeCCCCHHHHHHHHHhCCEEEEcCccc
Confidence 43 5588776432 111111111 111 1354 5899999999999999999999998 7
Q ss_pred cCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcC
Q 003145 470 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 547 (844)
Q Consensus 470 EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 547 (844)
||+|++++|||+|| .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.++++. ++.+.++.+++++.++.
T Consensus 274 e~~~~~~~Ea~a~G----~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~-- 346 (359)
T cd03823 274 ENFPLVIREALAAG----VPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDD-PDLLERLRAGIEPPRSI-- 346 (359)
T ss_pred CCCChHHHHHHHCC----CCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhC-hHHHHHHHHhHHHhhhH--
Confidence 99999999999996 899999999888887 3479999999999999999999985 44666666666666543
Q ss_pred HHHHHHHHHHHH
Q 003145 548 AQEWAETFVSEL 559 (844)
Q Consensus 548 ~~~W~~~fl~~l 559 (844)
...++.+++.+
T Consensus 347 -~~~~~~~~~~~ 357 (359)
T cd03823 347 -EDQAEEYLKLY 357 (359)
T ss_pred -HHHHHHHHHHh
Confidence 55555555433
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.3e-18 Score=192.48 Aligned_cols=214 Identities=13% Similarity=0.081 Sum_probs=152.9
Q ss_pred cCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEE
Q 003145 287 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVM 366 (844)
Q Consensus 287 ~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vi 366 (844)
.+|.|...+......+.. .+.. ...++.++|+|||++.|.+... ...++.++
T Consensus 94 ~ad~ii~~S~~~~~~l~~-----~g~~----------~~~~i~vIpNGVd~~~f~~~~~-------------~~~~~~vl 145 (331)
T PHA01630 94 PVDEIVVPSQWSKNAFYT-----SGLK----------IPQPIYVIPHNLNPRMFEYKPK-------------EKPHPCVL 145 (331)
T ss_pred cCCEEEECCHHHHHHHHH-----cCCC----------CCCCEEEECCCCCHHHcCCCcc-------------ccCCCEEE
Confidence 478888877655444432 1111 1236889999999998864311 01234456
Q ss_pred EEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCC
Q 003145 367 LGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR 446 (844)
Q Consensus 367 l~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~ 446 (844)
++++|+.+.||++.+|+|++.+.++.|+ +.|+++|.. +. +. .+. .++ + +.+
T Consensus 146 ~~~g~~~~~Kg~d~Li~A~~~l~~~~~~----~~llivG~~-----~~--~~--~l~----~~~------~------~~~ 196 (331)
T PHA01630 146 AILPHSWDRKGGDIVVKIFHELQNEGYD----FYFLIKSSN-----ML--DP--RLF----GLN------G------VKT 196 (331)
T ss_pred EEeccccccCCHHHHHHHHHHHHhhCCC----EEEEEEeCc-----cc--ch--hhc----ccc------c------eec
Confidence 6677899999999999999999887775 457777621 11 11 110 111 1 135
Q ss_pred CCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEEC--------------
Q 003145 447 SLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVN-------------- 510 (844)
Q Consensus 447 ~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvn-------------- 510 (844)
.++.+++..+|+.||+||+||..||||++++|||||| .|+|+|..+|..+.+ |.+|++|+
T Consensus 197 ~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G----~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~ 272 (331)
T PHA01630 197 PLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALG----LDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIH 272 (331)
T ss_pred cCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcC----CCEEEeCCCCchhhccCCCceEEeeecccccccccCCcc
Confidence 6889999999999999999999999999999999996 899999998888877 45666653
Q ss_pred -----CCCHHHHHHHHHHHhcCC-HHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHHHH
Q 003145 511 -----PWNITEVANAIARALNMS-PEEREKRH-WHNFTHVTTHTAQEWAETFVSELND 561 (844)
Q Consensus 511 -----P~d~~~~A~ai~~aL~m~-~~er~~r~-~~~~~~v~~~~~~~W~~~fl~~l~~ 561 (844)
|.|.+++++++.++|..+ ++++++++ .......+++++...++.+++.++.
T Consensus 273 ~G~~v~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 273 VGYFLDPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred cccccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 227889999999999874 23444444 4445567999999999999887753
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.6e-19 Score=192.99 Aligned_cols=198 Identities=17% Similarity=0.311 Sum_probs=130.9
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC--ceEEeecce
Q 003145 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGM 670 (844)
Q Consensus 593 Li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--l~liaenG~ 670 (844)
||++|+||||++. ...++++++++|++|.+ .|+.|+|+|||++..+.+.+..++ .++|++||+
T Consensus 1 li~~DlDGTLl~~--------------~~~i~~~~~~~i~~l~~-~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa 65 (256)
T TIGR00099 1 LIFIDLDGTLLND--------------DHTISPSTKEALAKLRE-KGIKVVLATGRPYKEVKNILKELGLDTPFITANGA 65 (256)
T ss_pred CEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCc
Confidence 5899999999986 34689999999999998 599999999999999999998884 479999999
Q ss_pred EEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCC--------CceEeeccce-EE----EEeec----CCh-----h
Q 003145 671 FLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTP--------RSHFEQRETS-LV----WNYKY----ADV-----E 728 (844)
Q Consensus 671 ~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~--------gs~iE~k~~s-l~----~hy~~----~d~-----e 728 (844)
++...++. .+....++ .+.+.++++...+..- +.++...... +. ..+.. .+. +
T Consensus 66 ~i~~~~~~--~i~~~~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (256)
T TIGR00099 66 AVIDDQGE--ILYKKPLD---LDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDD 140 (256)
T ss_pred EEECCCCC--EEeecCCC---HHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcc
Confidence 99864322 11112233 2344445544432211 1111110000 00 00000 000 0
Q ss_pred -h-------hHHHHHHHHHHHhcC-CCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEee
Q 003145 729 -F-------GRIQARDMLQHLWTG-PISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 798 (844)
Q Consensus 729 -~-------~~~qa~el~~~L~~~-~~~~~~~~v-~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD 798 (844)
+ ......++.+.+ .. .+ ...+.+ .++..++||.|+++|||.|++.+++.++ ++++.+++|||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~~------~~~~~~~~~GD 212 (256)
T TIGR00099 141 ILKILLLFLDPEDLDLLIEAL-NKLEL-EENVSVVSSGPYSIEITAKGVSKGSALQSLAEALG------ISLEDVIAFGD 212 (256)
T ss_pred cceEEEEECCHHHHHHHHHHh-hhhhh-cCCEEEEEecCceEEecCCCCChHHHHHHHHHHcC------CCHHHEEEeCC
Confidence 0 011122333333 21 11 123554 4577899999999999999999999998 78899999999
Q ss_pred CCCch--hhc--cCcEEEeCCCCcc
Q 003145 799 FLGKV--LLT--QFLIQVGSSINSL 819 (844)
Q Consensus 799 ~~~nD--Mf~--g~~Iavgna~~~~ 819 (844)
+.|| ||+ +++++|||+.+++
T Consensus 213 -~~nD~~m~~~~~~~~a~~na~~~~ 236 (256)
T TIGR00099 213 -GMNDIEMLEAAGYGVAMGNADEEL 236 (256)
T ss_pred -cHHhHHHHHhCCceeEecCchHHH
Confidence 9999 998 8999999997654
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.3e-19 Score=186.65 Aligned_cols=191 Identities=15% Similarity=0.222 Sum_probs=127.2
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC--ceEEeec
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--l~liaen 668 (844)
.|+|++|+||||++. +..++++++++|++|++ +|+.|+|+|||++..+.+++..++ .++|++|
T Consensus 1 ik~v~~DlDGTLl~~--------------~~~i~~~~~~~i~~l~~-~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~N 65 (215)
T TIGR01487 1 IKLVAIDIDGTLTEP--------------NRMISERAIEAIRKAEK-KGIPVSLVTGNTVPFARALAVLIGTSGPVVAEN 65 (215)
T ss_pred CcEEEEecCCCcCCC--------------CcccCHHHHHHHHHHHH-CCCEEEEEcCCcchhHHHHHHHhCCCCcEEEcc
Confidence 379999999999975 35689999999999987 699999999999999999988884 3699999
Q ss_pred ceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHHHHHHHHhcCCCCC
Q 003145 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN 748 (844)
Q Consensus 669 G~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~ 748 (844)
|+++...++. ....+ ....|...-... ..+....-...+ ......+... ..+ ...+.+.+ ..
T Consensus 66 Ga~i~~~~~~-~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~--~~~-----~~~~~~~l-~~---- 127 (215)
T TIGR01487 66 GGVIFYNKED-IFLAN--MEEEWFLDEEKK-KRFPRDRLSNEY--PRASLVIMRE--GKD-----VDEVREII-KE---- 127 (215)
T ss_pred CcEEEeCCCc-EEEec--ccchhhHHHhhh-hhhhhhhccccc--ceeEEEEecC--Ccc-----HHHHHHHH-Hh----
Confidence 9999863332 11111 111121100000 001000000000 0111111111 111 11223333 21
Q ss_pred CCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcchh
Q 003145 749 ASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSLSK 821 (844)
Q Consensus 749 ~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~a~ 821 (844)
..+.++.+...+||.|.+++||.++++++++++ ++.+.+++||| +.|| ||+ +++|+|+|+.+++.+
T Consensus 128 ~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~------i~~~~~i~iGD-s~ND~~ml~~ag~~vam~na~~~~k~ 197 (215)
T TIGR01487 128 RGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLG------IKPEEVAAIGD-SENDIDLFRVVGFKVAVANADDQLKE 197 (215)
T ss_pred CCeEEEecCceEEEecCCCChHHHHHHHHHHhC------CCHHHEEEECC-CHHHHHHHHhCCCeEEcCCccHHHHH
Confidence 245555566789999999999999999999998 67889999999 9999 999 899999999876544
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.9e-18 Score=185.04 Aligned_cols=273 Identities=21% Similarity=0.150 Sum_probs=191.3
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCC--ccHHHHH-hhhcCCEEEEecHHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLP--SRSDLLR-AVLAADLVGFHTYDYARHFVSACT 307 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp--~r~~ll~-~ll~aDlIgf~t~~~~~~Fl~~~~ 307 (844)
..|+|++|..+..++..++.+.....++.+..|...+... ..... ....+.+ .+-.+|.+.+.+....+.+.+.
T Consensus 80 ~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-- 156 (359)
T cd03808 80 RPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFT-SGGLKRRLYLLLERLALRFTDKVIFQNEDDRDLALKL-- 156 (359)
T ss_pred CCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhc-cchhHHHHHHHHHHHHHhhccEEEEcCHHHHHHHHHh--
Confidence 4599999988877777777665566777887776532211 00000 0011111 2235788888887776665441
Q ss_pred HHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHH
Q 003145 308 RILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEK 387 (844)
Q Consensus 308 ~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ 387 (844)
+.. ....++.+.|+|+|.+.+.+.... ...++.+|+++||+.+.||+..+++|+..
T Consensus 157 ---~~~---------~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~ 212 (359)
T cd03808 157 ---GII---------KKKKTVLIPGSGVDLDRFSPSPEP------------IPEDDPVFLFVARLLKDKGIDELLEAARI 212 (359)
T ss_pred ---cCC---------CcCceEEecCCCCChhhcCccccc------------cCCCCcEEEEEeccccccCHHHHHHHHHH
Confidence 000 012457788999999877542110 12467899999999999999999999999
Q ss_pred HHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcC
Q 003145 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTS 467 (844)
Q Consensus 388 ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S 467 (844)
+.+++|+ +.|+++|...... + .... ++...+.. ..|.+ .|. .+++..+|+.||++++||
T Consensus 213 l~~~~~~----~~l~i~G~~~~~~---~--~~~~---~~~~~~~~------~~v~~-~g~--~~~~~~~~~~adi~i~ps 271 (359)
T cd03808 213 LKAKGPN----VRLLLVGDGDEEN---P--AAIL---EIEKLGLE------GRVEF-LGF--RDDVPELLAAADVFVLPS 271 (359)
T ss_pred HHhcCCC----eEEEEEcCCCcch---h--hHHH---HHHhcCCc------ceEEE-eec--cccHHHHHHhccEEEecC
Confidence 9877775 4588777543211 1 1111 12222111 13554 555 678999999999999999
Q ss_pred CCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHH-HH
Q 003145 468 LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VT 544 (844)
Q Consensus 468 ~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~-v~ 544 (844)
..||||++++|||+|| .|+|+|+.+|..+.+ +.+|+++++.|+++++++|.+++..+ +.+.++..+++++ .+
T Consensus 272 ~~e~~~~~~~Ea~~~G----~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~-~~~~~~~~~~~~~~~~ 346 (359)
T cd03808 272 YREGLPRVLLEAMAMG----RPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDP-ELRARMGQAARKRAEE 346 (359)
T ss_pred cccCcchHHHHHHHcC----CCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHH
Confidence 9999999999999996 799999999998887 56799999999999999999988754 4666777777777 58
Q ss_pred hcCHHHHHHHHH
Q 003145 545 THTAQEWAETFV 556 (844)
Q Consensus 545 ~~~~~~W~~~fl 556 (844)
.+++..+++.++
T Consensus 347 ~~s~~~~~~~~~ 358 (359)
T cd03808 347 EFDEEIVVKKLL 358 (359)
T ss_pred hcCHHHHHHHhh
Confidence 899999988775
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.9e-18 Score=186.73 Aligned_cols=243 Identities=19% Similarity=0.146 Sum_probs=167.8
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHh
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (844)
..|+|++|+....++ . .+..+.|+.+++|..++.... .........+.+.+-+......+..
T Consensus 87 ~~Divh~~~~~~~~~--~--~~~~~~~~v~~~h~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~~~~~~------ 148 (335)
T cd03802 87 DFDIVHNHSLHLPLP--F--ARPLPVPVVTTLHGPPDPELL--------KLYYAARPDVPFVSISDAQRRPWPP------ 148 (335)
T ss_pred CCCEEEecCcccchh--h--hcccCCCEEEEecCCCCcccc--------hHHHhhCcCCeEEEecHHHHhhccc------
Confidence 469999999887766 2 234578899999987643211 1233344455554444322211100
Q ss_pred CcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHH
Q 003145 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (844)
Q Consensus 311 ~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~ 390 (844)
. .++.++|+|||++.|.+. ..++.+|+++||+.+.||+..+++|+.+
T Consensus 149 -------------~-~~~~vi~ngvd~~~~~~~----------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~--- 195 (335)
T cd03802 149 -------------L-PWVATVHNGIDLDDYPFR----------------GPKGDYLLFLGRISPEKGPHLAIRAARR--- 195 (335)
T ss_pred -------------c-cccEEecCCcChhhCCCC----------------CCCCCEEEEEEeeccccCHHHHHHHHHh---
Confidence 0 467899999999888641 1246789999999999999999999754
Q ss_pred hCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCC-C
Q 003145 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-R 469 (844)
Q Consensus 391 ~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~-~ 469 (844)
++ +.|+++|.+. ..+ .+...+.+... ++ ..|. +.|.++.+++..+|+.||++++||. .
T Consensus 196 --~~----~~l~i~G~~~---~~~--~~~~~~~~~~~-~~--------~~v~-~~G~~~~~~~~~~~~~~d~~v~ps~~~ 254 (335)
T cd03802 196 --AG----IPLKLAGPVS---DPD--YFYREIAPELL-DG--------PDIE-YLGEVGGAEKAELLGNARALLFPILWE 254 (335)
T ss_pred --cC----CeEEEEeCCC---CHH--HHHHHHHHhcc-cC--------CcEE-EeCCCCHHHHHHHHHhCcEEEeCCccc
Confidence 23 4588787532 111 12222222110 11 1355 4899999999999999999999998 5
Q ss_pred cCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHH-HHhc
Q 003145 470 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VTTH 546 (844)
Q Consensus 470 EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~-v~~~ 546 (844)
||||++++|||||| .|+|+|+.+|..+.+ |.+|+++++ +++++++|.+++.++.+ +.++. .+++
T Consensus 255 E~~~~~~lEAma~G----~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~~~-------~~~~~~~~~~ 321 (335)
T cd03802 255 EPFGLVMIEAMACG----TPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLDRA-------ACRRRAERRF 321 (335)
T ss_pred CCcchHHHHHHhcC----CCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccHHH-------HHHHHHHHhC
Confidence 99999999999996 799999999998888 447999987 99999999999765421 11222 3778
Q ss_pred CHHHHHHHHHHH
Q 003145 547 TAQEWAETFVSE 558 (844)
Q Consensus 547 ~~~~W~~~fl~~ 558 (844)
+++.-+++++..
T Consensus 322 s~~~~~~~~~~~ 333 (335)
T cd03802 322 SAARMVDDYLAL 333 (335)
T ss_pred CHHHHHHHHHHH
Confidence 888888777654
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-18 Score=185.65 Aligned_cols=205 Identities=17% Similarity=0.197 Sum_probs=129.7
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc---C-ceE
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY---N-LWL 664 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l---~-l~l 664 (844)
.+.|||++|+||||+++ +.+++++++++|++|.+ .|+.|+|+|||++..+.+.++.. . .++
T Consensus 3 ~~~klia~DlDGTLL~~--------------~~~is~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~ 67 (247)
T PTZ00174 3 MKKTILLFDVDGTLTKP--------------RNPITQEMKDTLAKLKS-KGFKIGVVGGSDYPKIKEQLGEDVLEDFDYV 67 (247)
T ss_pred CCCeEEEEECcCCCcCC--------------CCCCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHhhhhhcccCeE
Confidence 46899999999999987 45689999999999988 69999999999999998888743 2 367
Q ss_pred EeecceEEEecCCe-eeecccccCChHHHHHHHHHHHHHH-----hcCCCceEeeccceEEEEee-cCC-h----hhh--
Q 003145 665 AAENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFT-----ERTPRSHFEQRETSLVWNYK-YAD-V----EFG-- 730 (844)
Q Consensus 665 iaenG~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~-----~rt~gs~iE~k~~sl~~hy~-~~d-~----e~~-- 730 (844)
|++||+++...++. +...++...+.++...+.++++.+. ....+.+++.........+. ... . ++.
T Consensus 68 I~~NGa~I~~~~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (247)
T PTZ00174 68 FSENGLVAYKDGELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKY 147 (247)
T ss_pred EeCCceEEEECCeEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhc
Confidence 99999999864333 2222211234444444444443321 01122333322111111110 000 0 000
Q ss_pred ---HHHHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeC---CCch
Q 003145 731 ---RIQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF---LGKV 803 (844)
Q Consensus 731 ---~~qa~el~~~L~~~~~~~~~~~v~~-g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~---~~nD 803 (844)
.....++.+.+ ...+.+..+.... +..++||.|+|+|||.||+.|+++ .++|+||||. +.||
T Consensus 148 ~~~~~~~~~~~~~l-~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~----------~~eviafGD~~~~~~ND 216 (247)
T PTZ00174 148 DKEHHIREKFIQDL-KKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND----------FKEIHFFGDKTFEGGND 216 (247)
T ss_pred CCcchHHHHHHHHH-HHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh----------hhhEEEEcccCCCCCCc
Confidence 01113344444 3323333333343 357999999999999999999986 3789999993 5788
Q ss_pred --hhc---cCcEEEeCCCCcc
Q 003145 804 --LLT---QFLIQVGSSINSL 819 (844)
Q Consensus 804 --Mf~---g~~Iavgna~~~~ 819 (844)
||+ .-|+.|+|+.+++
T Consensus 217 ieMl~~~~~~g~~v~n~~~~~ 237 (247)
T PTZ00174 217 YEIYNDPRTIGHSVKNPEDTI 237 (247)
T ss_pred HhhhhcCCCceEEeCCHHHHH
Confidence 998 4567788876654
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.1e-19 Score=186.78 Aligned_cols=194 Identities=15% Similarity=0.161 Sum_probs=130.7
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc----eEEeec
Q 003145 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL----WLAAEN 668 (844)
Q Consensus 593 Li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l----~liaen 668 (844)
||++|+||||++. +..+++.+ ++|+ +.+ +|+.++|+|||+...+.+.++.+++ .+|++|
T Consensus 1 li~~DlDgTLl~~--------------~~~~~~~~-~~~~-~~~-~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~n 63 (236)
T TIGR02471 1 LIITDLDNTLLGD--------------DEGLASFV-ELLR-GSG-DAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARV 63 (236)
T ss_pred CeEEeccccccCC--------------HHHHHHHH-HHHH-hcC-CCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECC
Confidence 6899999999975 23455655 7776 544 6999999999999999999988743 489999
Q ss_pred ceEEEecCCeeeecccccCChHHHHHH-----HHHHHHHHhcCCCceEeeccc--eEEEEeecCChhhhHHHHHHHHHHH
Q 003145 669 GMFLRCTTGKWMTTMPEHLNMEWVDSL-----KHVFEYFTERTPRSHFEQRET--SLVWNYKYADVEFGRIQARDMLQHL 741 (844)
Q Consensus 669 G~~i~~~~~~w~~~~~~~~~~~w~~~v-----~~i~~~~~~rt~gs~iE~k~~--sl~~hy~~~d~e~~~~qa~el~~~L 741 (844)
|+.+..... +. .+..|...+ ..-+..+....+|..++.+.. ...++++..+.... ...++.+.+
T Consensus 64 Ga~i~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~l 134 (236)
T TIGR02471 64 GTEIYYGPE-LQ------PDRFWQKHIDHDWRRQAVVEALADIPGLTLQDDQEQGPFKISYLLDPEGEP--ILPQIRQRL 134 (236)
T ss_pred CceEEeCCC-CC------CChhHHHHHhcCCCHHHHHHHHhcCCCcEeCChhcCCCeeEEEEECcccch--HHHHHHHHH
Confidence 999864221 10 011121111 011233334466766655442 34556654321111 123334444
Q ss_pred hcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCC
Q 003145 742 WTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSI 816 (844)
Q Consensus 742 ~~~~~~~~~~~v-~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~ 816 (844)
... ...+.+ ..+..++||.|+++|||.|++.|+++++ ++++.+++||| +.|| ||+ +++|+|+|+.
T Consensus 135 -~~~--~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g------~~~~~~i~~GD-~~nD~~ml~~~~~~iav~na~ 204 (236)
T TIGR02471 135 -RQQ--SQAAKVILSCGWFLDVLPLRASKGLALRYLSYRWG------LPLEQILVAGD-SGNDEEMLRGLTLGVVVGNHD 204 (236)
T ss_pred -Hhc--cCCEEEEEECCceEEEeeCCCChHHHHHHHHHHhC------CCHHHEEEEcC-CccHHHHHcCCCcEEEEcCCc
Confidence 322 123444 4566889999999999999999999998 67899999999 9999 999 8999999998
Q ss_pred Ccchhh
Q 003145 817 NSLSKE 822 (844)
Q Consensus 817 ~~~a~~ 822 (844)
+++.+.
T Consensus 205 ~~~k~~ 210 (236)
T TIGR02471 205 PELEGL 210 (236)
T ss_pred HHHHHh
Confidence 765544
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.3e-18 Score=186.23 Aligned_cols=266 Identities=22% Similarity=0.209 Sum_probs=180.4
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHH-HHhhhcCCEEEEecHHHHHHHHHHHHH
Q 003145 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL-LRAVLAADLVGFHTYDYARHFVSACTR 308 (844)
Q Consensus 230 ~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~l-l~~ll~aDlIgf~t~~~~~~Fl~~~~~ 308 (844)
.+.|+|++|+...+.....+... .+.+..+++|........+. .....+ -..+..+|.|.+.+..+.+.+..
T Consensus 82 ~~~Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~---- 154 (357)
T cd03795 82 KKADVIHLHFPNPLADLALLLLP-RKKPVVVHWHSDIVKQKLLL--KLYRPLQRRFLRRADAIVATSPNYAETSPV---- 154 (357)
T ss_pred CCCCEEEEecCcchHHHHHHHhc-cCceEEEEEcChhhccchhh--hhhhHHHHHHHHhcCEEEeCcHHHHHHHHH----
Confidence 45699999986544332222222 46788888886432211111 111122 22345688888777665544322
Q ss_pred HhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHH
Q 003145 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388 (844)
Q Consensus 309 ~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~l 388 (844)
. .....++.++|+|+|...|.+... .. ........++++|+++||+.+.||+..+++|++++
T Consensus 155 ~------------~~~~~~~~~i~~gi~~~~~~~~~~---~~---~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l 216 (357)
T cd03795 155 L------------RRFRDKVRVIPLGLDPARYPRPDA---LE---EAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAAL 216 (357)
T ss_pred h------------cCCccceEEecCCCChhhcCCcch---hh---hHhhcCCCCCcEEEEecccccccCHHHHHHHHHhc
Confidence 1 111246889999999987754211 00 01111124678999999999999999999999876
Q ss_pred HHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCC
Q 003145 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (844)
Q Consensus 389 l~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~ 468 (844)
. ++.|+++|.+ +.. ..+.+++.+.+.. ..|. +.|.++.+++..+|+.||++++||.
T Consensus 217 ~--------~~~l~i~G~g-----~~~----~~~~~~~~~~~~~------~~V~-~~g~v~~~~~~~~~~~ad~~i~ps~ 272 (357)
T cd03795 217 P--------DAPLVIVGEG-----PLE----AELEALAAALGLL------DRVR-FLGRLDDEEKAALLAACDVFVFPSV 272 (357)
T ss_pred c--------CcEEEEEeCC-----hhH----HHHHHHHHhcCCc------ceEE-EcCCCCHHHHHHHHHhCCEEEeCCc
Confidence 3 3668878642 222 2333443332211 1355 5899999999999999999999996
Q ss_pred --CcCCChhHhhhhhcccCCCceEEEeCCCCchhhc---cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 003145 469 --RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV 543 (844)
Q Consensus 469 --~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l---g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v 543 (844)
.||||++++|||+|| .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.++++++ +++.++.+++++++
T Consensus 273 ~~~e~~g~~~~Ea~~~g----~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~-~~~~~~~~~~~~~~ 347 (357)
T cd03795 273 ERSEAFGIVLLEAMAFG----KPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDP-ELRERLGEAARERA 347 (357)
T ss_pred ccccccchHHHHHHHcC----CCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHH
Confidence 599999999999996 789999988888766 46799999999999999999999864 57777778888877
Q ss_pred H-hcCHH
Q 003145 544 T-THTAQ 549 (844)
Q Consensus 544 ~-~~~~~ 549 (844)
. .+++.
T Consensus 348 ~~~~s~~ 354 (357)
T cd03795 348 EEEFTAD 354 (357)
T ss_pred HHhcchH
Confidence 4 45543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.4e-18 Score=185.67 Aligned_cols=186 Identities=17% Similarity=0.138 Sum_probs=126.6
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC--ceEEeecce
Q 003145 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGM 670 (844)
Q Consensus 593 Li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--l~liaenG~ 670 (844)
||++|+||||++.. ..+.+.++++|++|.+ .|+.|+++|||+...+.+++..++ .++|++||+
T Consensus 1 li~~DlDGTll~~~--------------~~~~~~~~~~i~~l~~-~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa 65 (256)
T TIGR01486 1 WIFTDLDGTLLDPH--------------GYDWGPAKEVLERLQE-LGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGG 65 (256)
T ss_pred CEEEcCCCCCcCCC--------------CcCchHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCe
Confidence 58999999999763 2133468999999988 599999999999999999999885 479999999
Q ss_pred EEEecCCe------eeecccccCChHHHHHHHHHHHHHHhcCCCceE--ee----------------------ccceEEE
Q 003145 671 FLRCTTGK------WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHF--EQ----------------------RETSLVW 720 (844)
Q Consensus 671 ~i~~~~~~------w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~i--E~----------------------k~~sl~~ 720 (844)
++...++. |. .....+ .+.+.++++.+..+.+..+. .. ......+
T Consensus 66 ~i~~~~~~~~~~~~~~--~~~~i~---~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (256)
T TIGR01486 66 AIYGPRGWFTEPEYPV--IALGIP---YEKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETI 140 (256)
T ss_pred EEEeCCCcccCCCeEE--EEcCCC---HHHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCce
Confidence 99863321 21 111222 25566666654332111110 00 0000000
Q ss_pred EeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCC--CceEEEEee
Q 003145 721 NYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTA--IDYVLCIGH 798 (844)
Q Consensus 721 hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~--~d~vlaiGD 798 (844)
.+ +++ ....+.+.+ . ...+.+..+..++||.|+++|||.|+++|+++++ ++ .+++++|||
T Consensus 141 ~~---~~~----~~~~~~~~~-~----~~~~~~~~s~~~~ei~~~~~~Kg~ai~~l~~~~~------i~~~~~~~~a~GD 202 (256)
T TIGR01486 141 LW---SEE----RRERFTEAL-V----ELGLEVTHGNRFYHVLGAGSDKGKAANALKQFYN------QPGGAIKVVGLGD 202 (256)
T ss_pred ec---ChH----HHHHHHHHH-H----HcCCEEEeCCceEEEecCCCCHHHHHHHHHHHHh------hcCCCceEEEEcC
Confidence 00 111 112222333 2 1235666666799999999999999999999998 67 899999999
Q ss_pred CCCch--hhc--cCcEEEeCCCC
Q 003145 799 FLGKV--LLT--QFLIQVGSSIN 817 (844)
Q Consensus 799 ~~~nD--Mf~--g~~Iavgna~~ 817 (844)
+.|| ||+ |++|+||||.+
T Consensus 203 -~~ND~~Ml~~ag~~vam~Na~~ 224 (256)
T TIGR01486 203 -SPNDLPLLEVVDLAVVVPGPNG 224 (256)
T ss_pred -CHhhHHHHHHCCEEEEeCCCCC
Confidence 9999 999 89999999973
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.80 E-value=6e-18 Score=193.51 Aligned_cols=270 Identities=9% Similarity=-0.013 Sum_probs=174.9
Q ss_pred CCCCEEEEeCccch--h-HHHHHHhcCCCCeEEEEEecCCCChhhhhcCCcc-------HHHHHhh-hcCCEEEEecHHH
Q 003145 230 KDGDVVWCHDYHLM--F-LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-------SDLLRAV-LAADLVGFHTYDY 298 (844)
Q Consensus 230 ~~~DiVwvHDyhl~--l-lp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r-------~~ll~~l-l~aDlIgf~t~~~ 298 (844)
+..|+|++|..... . ++.++++ ..+.|+++.+|--+++..-. ..+.. ..+-+.+ -.||.|...+...
T Consensus 94 ~~~Dvi~~~~~~~~~~~~~a~~~~~-~~~~~~V~~~h~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~ 171 (415)
T cd03816 94 RPADYILIQNPPSIPTLLIAWLYCL-LRRTKLIIDWHNYGYTILAL-KLGENHPLVRLAKWYEKLFGRLADYNLCVTKAM 171 (415)
T ss_pred CCCCEEEEeCCCCchHHHHHHHHHH-HhCCeEEEEcCCchHHHHhc-ccCCCCHHHHHHHHHHHHHhhcCCEeeecCHHH
Confidence 35799999985532 2 2333333 34788999999654321101 01100 1111122 2467777666543
Q ss_pred HHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHH---------------Hh--C
Q 003145 299 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQE---------------TF--A 361 (844)
Q Consensus 299 ~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~---------------~~--~ 361 (844)
.+.+.. .+ ....++.++|+| +.+.|.+.... .....+.. .. +
T Consensus 172 ~~~l~~-----~~-----------~~~~ki~vI~Ng-~~~~f~p~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (415)
T cd03816 172 KEDLQQ-----FN-----------NWKIRATVLYDR-PPEQFRPLPLE----EKHELFLKLAKTFLTRELRIGAVQLSEE 230 (415)
T ss_pred HHHHHh-----hh-----------ccCCCeeecCCC-CHHHceeCcHH----HHHHHHHhccccccccccccccceecCC
Confidence 333221 11 124578899999 55677653211 11111110 01 2
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHHHhCcCC--CCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcc
Q 003145 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDW--RGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439 (844)
Q Consensus 362 ~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~--~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~ 439 (844)
+..+++++||+.+.||+..+|+|+..+.+..++. ..++.|+++|. ++..+ ++++++.+.+. .
T Consensus 231 ~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~-----G~~~~----~l~~~~~~~~l-------~ 294 (415)
T cd03816 231 RPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGK-----GPLKE----KYLERIKELKL-------K 294 (415)
T ss_pred CceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEec-----CccHH----HHHHHHHHcCC-------C
Confidence 3467889999999999999999999987632110 11366888874 33333 44444444322 2
Q ss_pred cEEEeCCCCCHHHHHHHHHhCcEEEEcC---CCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCH
Q 003145 440 PIHHLDRSLDFPALCALYAVTDVALVTS---LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNI 514 (844)
Q Consensus 440 pv~~~~~~v~~~el~aly~~ADv~v~~S---~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~ 514 (844)
.++++.+.++.+++..+|+.||++|.++ ..+||+++++|||||| .|+|+|..+|..+.+ |.+|++|+ |+
T Consensus 295 ~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G----~PVI~s~~~~~~eiv~~~~~G~lv~--d~ 368 (415)
T cd03816 295 KVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCG----LPVCALDFKCIDELVKHGENGLVFG--DS 368 (415)
T ss_pred cEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcC----CCEEEeCCCCHHHHhcCCCCEEEEC--CH
Confidence 4777788899999999999999999743 3588999999999996 799999999888888 56899994 99
Q ss_pred HHHHHHHHHHhcCC--HHHHHHHHHHHHHHHH
Q 003145 515 TEVANAIARALNMS--PEEREKRHWHNFTHVT 544 (844)
Q Consensus 515 ~~~A~ai~~aL~m~--~~er~~r~~~~~~~v~ 544 (844)
+++|++|.++++++ ++++.++.+++++..+
T Consensus 369 ~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~ 400 (415)
T cd03816 369 EELAEQLIDLLSNFPNRGKLNSLKKGAQEESE 400 (415)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh
Confidence 99999999999973 6677777777777664
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.6e-17 Score=184.48 Aligned_cols=268 Identities=16% Similarity=0.045 Sum_probs=179.3
Q ss_pred CCCEEEEeCccch--hHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHH-----HhhhcCCEEEEecHHHHHHHH
Q 003145 231 DGDVVWCHDYHLM--FLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLL-----RAVLAADLVGFHTYDYARHFV 303 (844)
Q Consensus 231 ~~DiVwvHDyhl~--llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll-----~~ll~aDlIgf~t~~~~~~Fl 303 (844)
..|+++||..... .+..+++. .+.++.+.+|..-.....+.. ....++ ..+..+|.|...+....+.+.
T Consensus 84 ~~~~~~i~~~~~~~~~~~~~~~~--~~~~~v~~~h~~~~~~~~~~~--~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~ 159 (363)
T cd04955 84 KRDIDHVHALGPAIAPFLPLLRL--KGKKVVVNMDGLEWKRAKWGR--PAKRYLKFGEKLAVKFADRLIADSPGIKEYLK 159 (363)
T ss_pred cCCeEEEEecCccHHHHHHHHHh--cCCCEEEEccCcceeeccccc--chhHHHHHHHHHHHhhccEEEeCCHHHHHHHH
Confidence 3467777765544 33333333 367888888853111111110 011111 123467888887764444432
Q ss_pred HHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh--CCCcEEEEEecccccCCHHHH
Q 003145 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKVMLGVDRLDMIKGIPQK 381 (844)
Q Consensus 304 ~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~VdRld~~KGi~~~ 381 (844)
. ..+ ... .++|+|+|...+.+. ...++.+ .+++.++++||+.+.||+..+
T Consensus 160 ~----~~~------------~~~--~~i~ngv~~~~~~~~----------~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~l 211 (363)
T cd04955 160 E----KYG------------RDS--TYIPYGADHVVSSEE----------DEILKKYGLEPGRYYLLVGRIVPENNIDDL 211 (363)
T ss_pred H----hcC------------CCC--eeeCCCcChhhcchh----------hhhHHhcCCCCCcEEEEEecccccCCHHHH
Confidence 1 111 111 789999998766430 0112222 355678999999999999999
Q ss_pred HHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCc
Q 003145 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (844)
Q Consensus 382 l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~AD 461 (844)
++|+.++.. ++.|+++|.+... . ++.+.+.+. .+.. ..|+ +.|.++.+++..+|+.||
T Consensus 212 i~a~~~l~~-------~~~l~ivG~~~~~--~---~~~~~~~~~-------~~~~--~~V~-~~g~~~~~~~~~~~~~ad 269 (363)
T cd04955 212 IEAFSKSNS-------GKKLVIVGNADHN--T---PYGKLLKEK-------AAAD--PRII-FVGPIYDQELLELLRYAA 269 (363)
T ss_pred HHHHHhhcc-------CceEEEEcCCCCc--c---hHHHHHHHH-------hCCC--CcEE-EccccChHHHHHHHHhCC
Confidence 999987632 3568888754211 1 233333321 1111 1355 589999999999999999
Q ss_pred EEEEcCCC-cCCChhHhhhhhcccCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 003145 462 VALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (844)
Q Consensus 462 v~v~~S~~-EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~ 540 (844)
++++||.. ||||++++|||||| .|+|+|..+|..+.++.+|.+++|.|. +|++|.++++++ +.+.++.++++
T Consensus 270 ~~v~ps~~~e~~~~~~~EAma~G----~PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i~~l~~~~-~~~~~~~~~~~ 342 (363)
T cd04955 270 LFYLHGHSVGGTNPSLLEAMAYG----CPVLASDNPFNREVLGDKAIYFKVGDD--LASLLEELEADP-EEVSAMAKAAR 342 (363)
T ss_pred EEEeCCccCCCCChHHHHHHHcC----CCEEEecCCccceeecCCeeEecCchH--HHHHHHHHHhCH-HHHHHHHHHHH
Confidence 99999999 99999999999996 899999999888888678999988776 999999999876 45666677777
Q ss_pred HHHH-hcCHHHHHHHHHHHH
Q 003145 541 THVT-THTAQEWAETFVSEL 559 (844)
Q Consensus 541 ~~v~-~~~~~~W~~~fl~~l 559 (844)
+.+. .++|+.-++++++.+
T Consensus 343 ~~~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 343 ERIREKYTWEKIADQYEELY 362 (363)
T ss_pred HHHHHhCCHHHHHHHHHHHh
Confidence 7775 589999888887654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.2e-17 Score=186.08 Aligned_cols=249 Identities=20% Similarity=0.180 Sum_probs=169.9
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCC----Ch-hhhhcCCcc-------------HHHHHhhhcCCEE
Q 003145 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFP----SS-EIHRTLPSR-------------SDLLRAVLAADLV 291 (844)
Q Consensus 230 ~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp----~~-e~~r~lp~r-------------~~ll~~ll~aDlI 291 (844)
.+.|+|+++.... ....+ ..+..+..+++|.|.+ .. ......+.. ....+.+..+|.|
T Consensus 82 ~~~D~v~~~~~~~--~~~~~--~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 157 (351)
T cd03804 82 SGYDLVISSSHAV--AKGVI--TRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYF 157 (351)
T ss_pred cCCCEEEEcCcHH--hcccc--CCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEE
Confidence 3578987765322 22222 3457788888998631 11 111111110 0111224567888
Q ss_pred EEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEec
Q 003145 292 GFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDR 371 (844)
Q Consensus 292 gf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdR 371 (844)
...+....+.+.+ .. +. +..++|+|+|.+.|.+.. ...++++++||
T Consensus 158 i~~S~~~~~~~~~----~~------------~~--~~~vi~~~~d~~~~~~~~----------------~~~~~il~~G~ 203 (351)
T cd03804 158 IANSRFVARRIKK----YY------------GR--DATVIYPPVDTDRFTPAE----------------EKEDYYLSVGR 203 (351)
T ss_pred EECCHHHHHHHHH----Hh------------CC--CcEEECCCCCHhhcCcCC----------------CCCCEEEEEEc
Confidence 7777665555432 11 11 245789999998775421 23567999999
Q ss_pred ccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHH
Q 003145 372 LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFP 451 (844)
Q Consensus 372 ld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~ 451 (844)
+.+.||++.+++|++++ | +.|+++|. +++.+.+++ ... ..|.| .|.++.+
T Consensus 204 ~~~~K~~~~li~a~~~~----~-----~~l~ivG~-----g~~~~~l~~-------~~~--------~~V~~-~g~~~~~ 253 (351)
T cd03804 204 LVPYKRIDLAIEAFNKL----G-----KRLVVIGD-----GPELDRLRA-------KAG--------PNVTF-LGRVSDE 253 (351)
T ss_pred CccccChHHHHHHHHHC----C-----CcEEEEEC-----ChhHHHHHh-------hcC--------CCEEE-ecCCCHH
Confidence 99999999999999864 3 33777764 233323322 111 13664 8999999
Q ss_pred HHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCH
Q 003145 452 ALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSP 529 (844)
Q Consensus 452 el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~ 529 (844)
++..+|+.||++++||. ||||++++|||||| .|+|+|..+|..+.+ +.+|++++|.|++++|++|.++++++.
T Consensus 254 ~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G----~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~~~ 328 (351)
T cd03804 254 ELRDLYARARAFLFPAE-EDFGIVPVEAMASG----TPVIAYGKGGALETVIDGVTGILFEEQTVESLAAAVERFEKNED 328 (351)
T ss_pred HHHHHHHhCCEEEECCc-CCCCchHHHHHHcC----CCEEEeCCCCCcceeeCCCCEEEeCCCCHHHHHHHHHHHHhCcc
Confidence 99999999999999999 99999999999996 899999999988877 457999999999999999999998774
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHH
Q 003145 530 EEREKRHWHNFTHVTTHTAQEWAETF 555 (844)
Q Consensus 530 ~er~~r~~~~~~~v~~~~~~~W~~~f 555 (844)
...+.+++.++++++.+..+++
T Consensus 329 ----~~~~~~~~~~~~~~~~~~~~~~ 350 (351)
T cd03804 329 ----FDPQAIRAHAERFSESRFREKI 350 (351)
T ss_pred ----cCHHHHHHHHHhcCHHHHHHHh
Confidence 1233445556677777766643
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.6e-18 Score=184.32 Aligned_cols=192 Identities=14% Similarity=0.130 Sum_probs=130.0
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc--eEEeec
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAEN 668 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l--~liaen 668 (844)
.|+|++|+||||++.. ..+++.++++|++|.+ .|+.++|+|||+...+...+..+++ ++|++|
T Consensus 4 ~kli~~DlDGTLl~~~--------------~~~~~~~~~ai~~l~~-~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~n 68 (273)
T PRK00192 4 KLLVFTDLDGTLLDHH--------------TYSYEPAKPALKALKE-KGIPVIPCTSKTAAEVEVLRKELGLEDPFIVEN 68 (273)
T ss_pred ceEEEEcCcccCcCCC--------------CcCcHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEc
Confidence 6899999999999852 3467889999999987 6999999999999999999998853 699999
Q ss_pred ceEEEecCC--------------eeeecccccCChHHHHHHHHHHHHHHhcCCCce-Eeec-------------------
Q 003145 669 GMFLRCTTG--------------KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSH-FEQR------------------- 714 (844)
Q Consensus 669 G~~i~~~~~--------------~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~-iE~k------------------- 714 (844)
|+++...++ .|... ...+ .+.+.++++.+.......+ +...
T Consensus 69 Ga~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (273)
T PRK00192 69 GAAIYIPKNYFPFQPDGERLKGDYWVIE--LGPP---YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARL 143 (273)
T ss_pred CcEEEecccccccCCccccccCCceEEE--cCCC---HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHH
Confidence 999975222 23211 1122 2445555543322111000 0000
Q ss_pred ----cceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCC
Q 003145 715 ----ETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAI 790 (844)
Q Consensus 715 ----~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~ 790 (844)
.....+-+.. + ......+...+ . ...+.+..++.++||.|.+ +||.|+++++++++ +++
T Consensus 144 ~~~~~~~~~~~~~~-~----~~~~~~~~~~l-~----~~~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~~------i~~ 206 (273)
T PRK00192 144 AKDREFSEPFLWNG-S----EAAKERFEEAL-K----RLGLKVTRGGRFLHLLGGG-DKGKAVRWLKELYR------RQD 206 (273)
T ss_pred HHhcccCCceeecC-c----hHHHHHHHHHH-H----HcCCEEEECCeEEEEeCCC-CHHHHHHHHHHHHh------ccC
Confidence 0000000000 0 01112222333 2 2246666677899999999 99999999999998 789
Q ss_pred -ceEEEEeeCCCch--hhc--cCcEEEeCCCCcch
Q 003145 791 -DYVLCIGHFLGKV--LLT--QFLIQVGSSINSLS 820 (844)
Q Consensus 791 -d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~a 820 (844)
+.+++||| +.|| ||+ +++|+|+||.+++.
T Consensus 207 ~~~v~~~GD-s~NDi~m~~~ag~~vam~NA~~~~k 240 (273)
T PRK00192 207 GVETIALGD-SPNDLPMLEAADIAVVVPGPDGPNP 240 (273)
T ss_pred CceEEEEcC-ChhhHHHHHhCCeeEEeCCCCCCCc
Confidence 99999999 9999 999 99999999987654
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.6e-18 Score=196.48 Aligned_cols=206 Identities=17% Similarity=0.205 Sum_probs=134.2
Q ss_pred HhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHH-HHhhcCCCCcEEEEcCCChhhHHHhhccc----C
Q 003145 587 LRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPL-NALCHDPKTTIVVLSGSDRNVLDKNFQEY----N 661 (844)
Q Consensus 587 ~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L-~~L~~d~g~~V~I~SGR~~~~l~~~~~~l----~ 661 (844)
..+.+.||++|+||||++..+ ...++...+.+| +++.+ +|..++++|||+...+.++.+.+ +
T Consensus 5 ~~~~~~lI~sDLDGTLL~~~~------------~~~~s~~~~~~l~~~~~~-~gi~fv~aTGR~~~~~~~l~~~~~l~~p 71 (413)
T PLN02382 5 SGSPRLMIVSDLDHTMVDHHD------------PENLSLLRFNALWEAEYR-HDSLLVFSTGRSPTLYKELRKEKPLLTP 71 (413)
T ss_pred cCCCCEEEEEcCCCcCcCCCC------------ccchhHHHHHHHHHHhhc-CCeeEEEEcCCCHHHHHHHHHhCCCCCC
Confidence 456678899999999997631 234665566666 77776 69999999999988877776665 3
Q ss_pred ceEEeecceEEEecC-----CeeeecccccCChHHHH-HHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHH
Q 003145 662 LWLAAENGMFLRCTT-----GKWMTTMPEHLNMEWVD-SLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQAR 735 (844)
Q Consensus 662 l~liaenG~~i~~~~-----~~w~~~~~~~~~~~w~~-~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~ 735 (844)
..+|+.||+.|...+ ..|...+ +..|.. .+.+.+..|....+....+.+...+.+.+...+ ......
T Consensus 72 ~~~I~~nGt~I~~~~~~~~d~~w~~~l----~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~---~~~~~~ 144 (413)
T PLN02382 72 DITIMSVGTEIAYGESMVPDHGWVEYL----NKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDKKK---AQEVIK 144 (413)
T ss_pred CEEEEcCCcEEEeCCCCccChhHHHHH----hccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEechHH---hHHHHH
Confidence 357888999997522 1232221 223332 122222222111112223344455555543211 111123
Q ss_pred HHHHHHhcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHh---cccCcCCCCCceEEEEeeCCCch--hhc--c
Q 003145 736 DMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEI---VHSKKMKTAIDYVLCIGHFLGKV--LLT--Q 807 (844)
Q Consensus 736 el~~~L~~~~~~~~~~~v-~~g~~~vEV~p~gvnKG~al~~Ll~~l---~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g 807 (844)
++.+.+ .. ....+.+ .++..++||.|+++|||.|+++|++++ + ++++.+++||| +.|| ||+ +
T Consensus 145 ~l~~~~-~~--~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~g------i~~~~~iafGD-s~NDleMl~~ag 214 (413)
T PLN02382 145 ELSERL-EK--RGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEG------KAPVNTLVCGD-SGNDAELFSVPD 214 (413)
T ss_pred HHHHHH-Hh--cCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcC------CChhcEEEEeC-CHHHHHHHhcCC
Confidence 333333 21 1223454 467889999999999999999999998 6 78899999999 9999 998 7
Q ss_pred -CcEEEeCCCCcchhh
Q 003145 808 -FLIQVGSSINSLSKE 822 (844)
Q Consensus 808 -~~Iavgna~~~~a~~ 822 (844)
++|+||||.+++.+.
T Consensus 215 ~~gvam~NA~~elk~~ 230 (413)
T PLN02382 215 VYGVMVSNAQEELLQW 230 (413)
T ss_pred CCEEEEcCCcHHHHHH
Confidence 799999999887653
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.6e-18 Score=178.40 Aligned_cols=186 Identities=16% Similarity=0.163 Sum_probs=120.2
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC---ceEEeecc
Q 003145 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN---LWLAAENG 669 (844)
Q Consensus 593 Li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~---l~liaenG 669 (844)
+|++|+||||++.. ..+++.++++|++|.+ .|+.|+|+|||+...+..++..++ .++||+||
T Consensus 1 ~i~~DlDGTLL~~~--------------~~~~~~~~~~l~~l~~-~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NG 65 (221)
T TIGR02463 1 WVFSDLDGTLLDSH--------------SYDWQPAAPWLTRLQE-AGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENG 65 (221)
T ss_pred CEEEeCCCCCcCCC--------------CCCcHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCC
Confidence 58999999999762 2245559999999987 699999999999999999999885 46999999
Q ss_pred eEEEecCCeeeecc--c-ccCChHHHHHHHHHHHHHHhcCCC-ceEee-----------------------ccceEEEEe
Q 003145 670 MFLRCTTGKWMTTM--P-EHLNMEWVDSLKHVFEYFTERTPR-SHFEQ-----------------------RETSLVWNY 722 (844)
Q Consensus 670 ~~i~~~~~~w~~~~--~-~~~~~~w~~~v~~i~~~~~~rt~g-s~iE~-----------------------k~~sl~~hy 722 (844)
+.+.... .|+... . .....+| +.+.++++...+...- ..... +.....+..
T Consensus 66 a~i~~~~-~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (221)
T TIGR02463 66 AAIHLEE-LWREEPGYPRIILGISY-GIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLW 143 (221)
T ss_pred cEEEcCc-ccccCCCceEEecCCCH-HHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEe
Confidence 9998521 111000 0 0011122 3344555433221000 00000 001111111
Q ss_pred ecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCc
Q 003145 723 KYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGK 802 (844)
Q Consensus 723 ~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~n 802 (844)
. .+++ ...++.+.+ .. .++.+..+..++||.|++++||.|+++++++++ ++++++++||| +.|
T Consensus 144 ~-~~~~----~~~~~~~~l-~~----~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~lg------i~~~~vi~~GD-~~N 206 (221)
T TIGR02463 144 R-DSDS----RMPRFTALL-AD----LGLAIVQGNRFSHVLGASSSKGKAANWLKATYN------QPDVKTLGLGD-GPN 206 (221)
T ss_pred c-Cchh----HHHHHHHHH-HH----cCCeEEecCCeeEEecCCCCHHHHHHHHHHHhC------CCCCcEEEECC-CHH
Confidence 0 0111 112222333 22 235666677899999999999999999999999 78999999999 999
Q ss_pred h--hhc--cCcEEE
Q 003145 803 V--LLT--QFLIQV 812 (844)
Q Consensus 803 D--Mf~--g~~Iav 812 (844)
| ||+ |++||+
T Consensus 207 Di~ml~~ag~~va~ 220 (221)
T TIGR02463 207 DLPLLEVADYAVVI 220 (221)
T ss_pred HHHHHHhCCceEEe
Confidence 9 998 888886
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.1e-17 Score=179.84 Aligned_cols=196 Identities=21% Similarity=0.322 Sum_probs=148.1
Q ss_pred EEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccc--cCCHHHHHHHHHHHHHh-CcCCCCce
Q 003145 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDM--IKGIPQKLLAFEKFLEE-NSDWRGKV 399 (844)
Q Consensus 326 ~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~--~KGi~~~l~Af~~ll~~-~P~~~~~v 399 (844)
.++.++|+|||.+.|.+... ...++.+ .++++++.+++... .||+..+++|++.+.++ .| ++
T Consensus 159 ~~~~vi~ngi~~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~----~~ 226 (365)
T cd03825 159 IPIEVIPNGIDTTIFRPRDK--------REARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKD----DI 226 (365)
T ss_pred CceEEeCCCCcccccCCCcH--------HHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCC----Ce
Confidence 47889999999988754211 1233333 34566666666654 89999999999988665 34 45
Q ss_pred EEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCC-HHHHHHHHHhCcEEEEcCCCcCCChhHhh
Q 003145 400 VLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLD-FPALCALYAVTDVALVTSLRDGMNLVSYE 478 (844)
Q Consensus 400 ~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~-~~el~aly~~ADv~v~~S~~EG~~Lv~~E 478 (844)
.++++|... +.. . . .++ ..|. +.|.++ .+++..+|+.||++++||..||||++++|
T Consensus 227 ~~~i~G~~~----~~~-----~--~---~~~--------~~v~-~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~E 283 (365)
T cd03825 227 ELVVFGASD----PEI-----P--P---DLP--------FPVH-YLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIE 283 (365)
T ss_pred EEEEeCCCc----hhh-----h--c---cCC--------CceE-ecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHH
Confidence 677776432 100 0 0 111 1255 478888 88999999999999999999999999999
Q ss_pred hhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHH
Q 003145 479 FVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETF 555 (844)
Q Consensus 479 ama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~f 555 (844)
||+|+ .|+|+|..+|..+.+ +.+|+++++.|.+++|++|.++++.+ +++.++.+++++.+ ..++++..++.+
T Consensus 284 am~~g----~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~ 358 (365)
T cd03825 284 ALACG----TPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADP-DEREELGEAARELAENEFDSRVQAKRY 358 (365)
T ss_pred HHhcC----CCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 99996 799999998888887 34799999999999999999999854 46667777777777 568999999999
Q ss_pred HHHHHH
Q 003145 556 VSELND 561 (844)
Q Consensus 556 l~~l~~ 561 (844)
++.+++
T Consensus 359 ~~~y~~ 364 (365)
T cd03825 359 LSLYEE 364 (365)
T ss_pred HHHHhh
Confidence 877654
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.7e-17 Score=177.23 Aligned_cols=246 Identities=19% Similarity=0.141 Sum_probs=166.4
Q ss_pred CCCEEEEeCc-cchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHH
Q 003145 231 DGDVVWCHDY-HLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (844)
Q Consensus 231 ~~DiVwvHDy-hl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~ 309 (844)
..|+|++|++ ...++..+.+. . +.++.+.+|..++.... ...+........+..+|.+.+.+....+.+.+.
T Consensus 81 ~~dii~~~~~~~~~~~~~~~~~-~-~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~---- 153 (353)
T cd03811 81 KPDVVISHLTTTPNVLALLAAR-L-GTKLIVWEHNSLSLELK-RKLRLLLLIRKLYRRADKIVAVSEGVKEDLLKL---- 153 (353)
T ss_pred CCCEEEEcCccchhHHHHHHhh-c-CCceEEEEcCcchhhhc-cchhHHHHHHhhccccceEEEeccchhhhHHHh----
Confidence 4699999988 44444444443 3 78999999988754321 111111122334456888888776655554331
Q ss_pred hCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHH
Q 003145 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 389 (844)
Q Consensus 310 l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll 389 (844)
.+ ....++.++|+|+|.+.+.+.... .. . .....++.+|+++||+.+.||+..+++|+..+.
T Consensus 154 ~~-----------~~~~~~~vi~~~~~~~~~~~~~~~-----~~-~-~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~ 215 (353)
T cd03811 154 LG-----------IPPDKIEVIYNPIDIEEIRALAEE-----PL-E-LGIPPDGPVILAVGRLSPQKGFDTLIRAFALLR 215 (353)
T ss_pred hc-----------CCccccEEecCCcChhhcCcccch-----hh-h-cCCCCCceEEEEEecchhhcChHHHHHHHHHhh
Confidence 11 013578899999998877643211 00 0 011246789999999999999999999999998
Q ss_pred HhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCC
Q 003145 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR 469 (844)
Q Consensus 390 ~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~ 469 (844)
++.++ +.|+++|.+ +....++ +++.+.+.. ..|. +.+.. +++..+|+.||++++||..
T Consensus 216 ~~~~~----~~l~i~G~~-----~~~~~~~----~~~~~~~~~------~~v~-~~g~~--~~~~~~~~~~d~~i~ps~~ 273 (353)
T cd03811 216 KEGPD----ARLVILGDG-----PLREELE----ALAKELGLA------DRVH-FLGFQ--SNPYPYLKAADLFVLSSRY 273 (353)
T ss_pred hcCCC----ceEEEEcCC-----ccHHHHH----HHHHhcCCC------ccEE-Eeccc--CCHHHHHHhCCEEEeCccc
Confidence 77665 458877642 2222333 333343321 1244 46654 4688999999999999999
Q ss_pred cCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHH---HHHHHHhcC
Q 003145 470 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA---NAIARALNM 527 (844)
Q Consensus 470 EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A---~ai~~aL~m 527 (844)
||||++++|||+|| .|+|+|+.+|..+.+ +.+|+++++.|.++++ ++|..++..
T Consensus 274 e~~~~~~~Ea~~~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 332 (353)
T cd03811 274 EGFPNVLLEAMALG----TPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLLLD 332 (353)
T ss_pred CCCCcHHHHHHHhC----CCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCC
Confidence 99999999999996 799999999988887 5679999999999995 455555443
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.8e-17 Score=172.52 Aligned_cols=210 Identities=15% Similarity=0.155 Sum_probs=130.1
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc-C---ceEEe
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY-N---LWLAA 666 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l-~---l~lia 666 (844)
++++++|+||||++. +.+++++++++|++|.+ . +.|+++|||++..+.+.|+.. . .++|+
T Consensus 7 ~~i~~~D~DGTLl~~--------------~~~i~~~~~~ai~~l~~-~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~ 70 (245)
T PLN02423 7 GVIALFDVDGTLTAP--------------RKEATPEMLEFMKELRK-V-VTVGVVGGSDLSKISEQLGKTVINDYDYVFS 70 (245)
T ss_pred ceEEEEeccCCCcCC--------------CCcCCHHHHHHHHHHHh-C-CEEEEECCcCHHHHHHHhcccccccCCEEEE
Confidence 346669999999976 35688999999999986 4 999999999999998888874 1 47899
Q ss_pred ecceEEEecCCeeeec--ccccCChHHHHHHHHHHHHHHhc-----CCCceEeeccceEEEEe--ecCChh----hh---
Q 003145 667 ENGMFLRCTTGKWMTT--MPEHLNMEWVDSLKHVFEYFTER-----TPRSHFEQRETSLVWNY--KYADVE----FG--- 730 (844)
Q Consensus 667 enG~~i~~~~~~w~~~--~~~~~~~~w~~~v~~i~~~~~~r-----t~gs~iE~k~~sl~~hy--~~~d~e----~~--- 730 (844)
+||+++...+ ++... ++...+.+-...+.+.++.+... ..+.+++..+..+.+.+ .++... +.
T Consensus 71 ~NGa~i~~~g-~~i~~~~l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~ 149 (245)
T PLN02423 71 ENGLVAHKDG-KLIGTQSLKSFLGEDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYD 149 (245)
T ss_pred CCceEEEeCC-EEEEEecccccCCHHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhC
Confidence 9999998533 33221 11223323333333333322111 12445543332222221 222100 00
Q ss_pred --HHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeC---CCch-
Q 003145 731 --RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF---LGKV- 803 (844)
Q Consensus 731 --~~qa~el~~~L~~~~~~~~~~~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~---~~nD- 803 (844)
.....++.+.+ ...+.+..+.+. .|..++||+++|+|||.||+.|+ . +++++||||. +.||
T Consensus 150 ~i~~~~~~~~~~l-~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~---~--------~~e~~aFGD~~~~~~ND~ 217 (245)
T PLN02423 150 KVHNIRPKMVSVL-REKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE---D--------FDEIHFFGDKTYEGGNDH 217 (245)
T ss_pred ccchHHHHHHHHH-HHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc---C--------cCeEEEEeccCCCCCCcH
Confidence 11123344444 332333334433 35689999999999999999997 2 6899999993 4899
Q ss_pred -hhccCcEEEeCCCCcchhhhcCCHHHHHHHHHHHh
Q 003145 804 -LLTQFLIQVGSSINSLSKEKKRKVHQLFGIFLRFS 838 (844)
Q Consensus 804 -Mf~g~~Iavgna~~~~a~~~l~~~~~v~~~l~~~~ 838 (844)
|++..+ +-.+.++++++.+++|+++.
T Consensus 218 eMl~~~~---------~~~~~~~~~~~~~~~~~~~~ 244 (245)
T PLN02423 218 EIFESER---------TIGHTVTSPDDTREQCTALF 244 (245)
T ss_pred HHHhCCC---------cceEEeCCHHHHHHHHHHhc
Confidence 988211 12345677888888887763
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.7e-16 Score=178.95 Aligned_cols=241 Identities=12% Similarity=-0.019 Sum_probs=158.1
Q ss_pred CCCCEEEEeCccchh---HHHHHHhcCCCCeEEEEEecCCCChhhhhcC--C----ccHHHHHhh-hcCCEEEEecHHHH
Q 003145 230 KDGDVVWCHDYHLMF---LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTL--P----SRSDLLRAV-LAADLVGFHTYDYA 299 (844)
Q Consensus 230 ~~~DiVwvHDyhl~l---lp~~lr~~~~~~~i~~flH~Pfp~~e~~r~l--p----~r~~ll~~l-l~aDlIgf~t~~~~ 299 (844)
...|+|++|..+.+. .+.++. +..++|+.+.+|..+.+.-..... + ....+.+.+ -.+|.|...+....
T Consensus 99 ~~~DvV~~~~~~~~~~~~~~~~~~-~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~~~~ 177 (371)
T PLN02275 99 PRPDVFLVQNPPSVPTLAVVKLAC-WLRRAKFVIDWHNFGYTLLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTKAMQ 177 (371)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHH-HHhCCCEEEEcCCccHHHHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCHHHH
Confidence 356999999877532 333333 334688888888753211000000 0 011122222 24788887776554
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHH
Q 003145 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIP 379 (844)
Q Consensus 300 ~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~ 379 (844)
+...+ . .|.. +.++|+| |.+.|.+.... ..++ .+...+++++||+.+.||+.
T Consensus 178 ~~l~~----~------------~g~~--i~vi~n~-~~~~f~~~~~~-------~~~~--~~~~~~i~~~grl~~~k~~~ 229 (371)
T PLN02275 178 HELDQ----N------------WGIR--ATVLYDQ-PPEFFRPASLE-------IRLR--PNRPALVVSSTSWTPDEDFG 229 (371)
T ss_pred HHHHH----h------------cCCC--eEEECCC-CHHHcCcCCch-------hccc--CCCcEEEEEeCceeccCCHH
Confidence 44322 0 1111 6788998 45777543110 0111 12345788999999999999
Q ss_pred HHHHHHHHHHH-----------------hCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEE
Q 003145 380 QKLLAFEKFLE-----------------ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 442 (844)
Q Consensus 380 ~~l~Af~~ll~-----------------~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~ 442 (844)
.+++|+..+.. ++|+ +.|+++|. |++.+++++ ++.+.+. ..++
T Consensus 230 ~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~----i~l~ivG~-----G~~~~~l~~----~~~~~~l-------~~v~ 289 (371)
T PLN02275 230 ILLEAAVMYDRRVAARLNESDSASGKQSLYPR----LLFIITGK-----GPQKAMYEE----KISRLNL-------RHVA 289 (371)
T ss_pred HHHHHHHHHHhhhhhccccccccccccccCCC----eEEEEEeC-----CCCHHHHHH----HHHHcCC-------CceE
Confidence 99999988742 2343 66888874 344444444 4443322 2477
Q ss_pred EeCCCCCHHHHHHHHHhCcEEEEcC---CCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHH
Q 003145 443 HLDRSLDFPALCALYAVTDVALVTS---LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEV 517 (844)
Q Consensus 443 ~~~~~v~~~el~aly~~ADv~v~~S---~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~ 517 (844)
++.+.++.++++.+|+.||+||+|+ ..|||+++++|||||| .|+|+|..+|..+.+ |.+|++|+ |++++
T Consensus 290 ~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G----~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~l 363 (371)
T PLN02275 290 FRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCG----LPVCAVSYSCIGELVKDGKNGLLFS--SSSEL 363 (371)
T ss_pred EEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCC----CCEEEecCCChHHHccCCCCeEEEC--CHHHH
Confidence 7777899999999999999999863 2489999999999996 799999998988887 66899996 69999
Q ss_pred HHHHHHHh
Q 003145 518 ANAIARAL 525 (844)
Q Consensus 518 A~ai~~aL 525 (844)
|++|.++|
T Consensus 364 a~~i~~l~ 371 (371)
T PLN02275 364 ADQLLELL 371 (371)
T ss_pred HHHHHHhC
Confidence 99998875
|
|
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.6e-16 Score=177.45 Aligned_cols=300 Identities=22% Similarity=0.206 Sum_probs=207.4
Q ss_pred CCCEEEEeCccchhHHHHHHhc---CCCCeEEEEEecC-----CC-ChhhhhcCCc---c----------HHHHHhhhcC
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEY---NSDMKVGWFLHTP-----FP-SSEIHRTLPS---R----------SDLLRAVLAA 288 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~---~~~~~i~~flH~P-----fp-~~e~~r~lp~---r----------~~ll~~ll~a 288 (844)
.+|||++||||..|+|.++++. ...++.+|+.|.- |+ .......||. . .-+-.++..|
T Consensus 130 ~pDIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~a 209 (487)
T COG0297 130 LPDIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYA 209 (487)
T ss_pred CCCEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheec
Confidence 5799999999999999999996 7789999999953 33 1122233441 1 2233456778
Q ss_pred CEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcC-----------CchHHHHHHHH
Q 003145 289 DLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI-----------NPVQVHIKELQ 357 (844)
Q Consensus 289 DlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~-----------~~~~~~~~~lr 357 (844)
|.|..-++.|++.-.. ...|. .-...+.+ +..++.-|=+|||.+...|.... +.-.+....|.
T Consensus 210 d~vttVSptYa~Ei~t---~~~g~-gl~g~l~~--~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~ 283 (487)
T COG0297 210 DAVTTVSPTYAGEIYT---PEYGE-GLEGLLSW--RSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQ 283 (487)
T ss_pred cEEEEECHHHHHhhcc---ccccc-cchhhhhh--ccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHH
Confidence 8888888887766441 00000 00011112 22456777788887766553221 00112223455
Q ss_pred HHhC-----CCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcc
Q 003145 358 ETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGR 432 (844)
Q Consensus 358 ~~~~-----~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~ 432 (844)
+.++ +.+++..|+||...||++.+++|+..++++. ..||++|.+ + + .++..+..++.++.++
T Consensus 284 ~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~------~~~vilG~g---d-~---~le~~~~~la~~~~~~ 350 (487)
T COG0297 284 ERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG------WQLVLLGTG---D-P---ELEEALRALASRHPGR 350 (487)
T ss_pred HHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC------ceEEEEecC---c-H---HHHHHHHHHHHhcCce
Confidence 5552 5689999999999999999999999999976 347777753 1 2 5677888888877653
Q ss_pred cCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc-c--------
Q 003145 433 FGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-G-------- 503 (844)
Q Consensus 433 ~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l-g-------- 503 (844)
+. +.-..+..-...+|..||++++||..|++||+-++||.-| .++|+.+.+|.++.+ .
T Consensus 351 ~~---------~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryG----tvpIv~~tGGLadTV~~~~~~~~~~ 417 (487)
T COG0297 351 VL---------VVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYG----TLPIVRETGGLADTVVDRNEWLIQG 417 (487)
T ss_pred EE---------EEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcC----CcceEcccCCccceecCccchhccC
Confidence 22 2334456666789999999999999999999999999986 799999999999977 2
Q ss_pred -CCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH--HhcCHHHHHHHHHHHHHHhH
Q 003145 504 -AGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV--TTHTAQEWAETFVSELNDTV 563 (844)
Q Consensus 504 -~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v--~~~~~~~W~~~fl~~l~~~~ 563 (844)
.+|+++.|.|.++++.+|.+|+..-..... .++...... ..++|+.-+.++++-.+...
T Consensus 418 ~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~-~w~~~~~~~m~~d~sw~~sa~~y~~lY~~~~ 479 (487)
T COG0297 418 VGTGFLFLQTNPDHLANALRRALVLYRAPPL-LWRKVQPNAMGADFSWDLSAKEYVELYKPLL 479 (487)
T ss_pred ceeEEEEecCCHHHHHHHHHHHHHHhhCCHH-HHHHHHHhhcccccCchhHHHHHHHHHHHHh
Confidence 368999999999999999999975432111 022222222 46788888888887766554
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=9e-17 Score=186.53 Aligned_cols=194 Identities=16% Similarity=0.136 Sum_probs=129.5
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC--ceEEe
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAA 666 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--l~lia 666 (844)
.++|+|++|+||||++.. ..++++++++|++|.+ .|+.|+++|||+...+..+++.++ .++|+
T Consensus 414 ~~~KLIfsDLDGTLLd~d--------------~~i~~~t~eAL~~L~e-kGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~ 478 (694)
T PRK14502 414 QFKKIVYTDLDGTLLNPL--------------TYSYSTALDALRLLKD-KELPLVFCSAKTMGEQDLYRNELGIKDPFIT 478 (694)
T ss_pred ceeeEEEEECcCCCcCCC--------------CccCHHHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHcCCCCeEEE
Confidence 367999999999999863 3456789999999997 599999999999999999998885 46999
Q ss_pred ecceEEEecCCeee-------------ecccccCChHHHHHHHHHHHHHHhcCC----------CceEeecc--------
Q 003145 667 ENGMFLRCTTGKWM-------------TTMPEHLNMEWVDSLKHVFEYFTERTP----------RSHFEQRE-------- 715 (844)
Q Consensus 667 enG~~i~~~~~~w~-------------~~~~~~~~~~w~~~v~~i~~~~~~rt~----------gs~iE~k~-------- 715 (844)
+||+.+...++ |. .+.....+ .+.+.++++...+... +.++....
T Consensus 479 eNGA~I~~~~~-~~~~~~~~~~~~~~~iI~~~~l~---~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~ 554 (694)
T PRK14502 479 ENGGAIFIPKD-YFRLPFAYDRVAGNYLVIELGMA---YKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVS 554 (694)
T ss_pred cCCCEEEECCC-cccccccccccCCCeEEEEcCCC---HHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHH
Confidence 99999986332 11 01111222 2334444443322110 11111100
Q ss_pred -----------------ceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHH
Q 003145 716 -----------------TSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILA 778 (844)
Q Consensus 716 -----------------~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~ 778 (844)
.+..+.+.. + .....++.+.| . ...+.+..|..++||. .++|||.|++.|++
T Consensus 555 ~~TgL~~~~a~~a~~Re~seKIl~~g-d----~e~Leel~~~L-~----~~~l~v~~g~rfleI~-~gvdKG~AL~~L~e 623 (694)
T PRK14502 555 RLTDLNLKQAELAKQREYSETVHIEG-D----KRSTNIVLNHI-Q----QSGLEYSFGGRFYEVT-GGNDKGKAIKILNE 623 (694)
T ss_pred HhhCCCHHHHHHHhhccCceeEEEcC-C----HHHHHHHHHHH-H----HcCcEEEECCEEEEeC-CCCCHHHHHHHHHH
Confidence 000000000 0 01123344444 2 2256677799999999 59999999999999
Q ss_pred HhcccCcCCCCCceEEEE--eeCCCch--hhc--cCcEEEeCCCCcc
Q 003145 779 EIVHSKKMKTAIDYVLCI--GHFLGKV--LLT--QFLIQVGSSINSL 819 (844)
Q Consensus 779 ~l~~~~~~~~~~d~vlai--GD~~~nD--Mf~--g~~Iavgna~~~~ 819 (844)
.++ ++.+.+++| || +.|| ||+ +++|+|++...+.
T Consensus 624 ~~g------I~~~eViafalGD-s~NDisMLe~Ag~gVAM~~~~~~~ 663 (694)
T PRK14502 624 LFR------LNFGNIHTFGLGD-SENDYSMLETVDSPILVQRPGNKW 663 (694)
T ss_pred HhC------CCccceEEEEcCC-cHhhHHHHHhCCceEEEcCCCCCC
Confidence 998 667888888 99 9999 999 9999999865543
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.8e-17 Score=175.89 Aligned_cols=218 Identities=18% Similarity=0.268 Sum_probs=137.9
Q ss_pred CeEEEEecCCccC-CCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC----ceEE
Q 003145 591 NRLLILGFNATLT-EPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN----LWLA 665 (844)
Q Consensus 591 ~rLi~lD~DGTL~-~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~----l~li 665 (844)
++||++|+||||+ .+ ..-.+++.+.|+ ....++..++++|||+...+.+.+...+ .++|
T Consensus 2 ~~ll~sDlD~Tl~~~~---------------~~~~~~l~~~l~-~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I 65 (247)
T PF05116_consen 2 PRLLASDLDGTLIDGD---------------DEALARLEELLE-QQARPEILFVYVTGRSLESVLRLLREYNLPQPDYII 65 (247)
T ss_dssp SEEEEEETBTTTBHCH---------------HHHHHHHHHHHH-HHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEE
T ss_pred CEEEEEECCCCCcCCC---------------HHHHHHHHHHHH-HhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEE
Confidence 5899999999999 22 112355666666 3334789999999999999998888763 4799
Q ss_pred eecceEEEecC-----CeeeecccccCChHHH-HHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHHHHHH
Q 003145 666 AENGMFLRCTT-----GKWMTTMPEHLNMEWV-DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQ 739 (844)
Q Consensus 666 aenG~~i~~~~-----~~w~~~~~~~~~~~w~-~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el~~ 739 (844)
+.+|+.|.... ..|...+ +..|. +.+.+++..+..-.+..-.+.....+.|.+...+.. ....++.+
T Consensus 66 ~svGt~I~~~~~~~~d~~w~~~i----~~~w~~~~v~~~l~~~~~l~~q~~~~q~~~k~sy~~~~~~~~---~~~~~i~~ 138 (247)
T PF05116_consen 66 TSVGTEIYYGENWQPDEEWQAHI----DERWDRERVEEILAELPGLRPQPESEQRPFKISYYVDPDDSA---DILEEIRA 138 (247)
T ss_dssp ETTTTEEEESSTTEE-HHHHHHH----HTT--HHHHHHHHHCHCCEEEGGCCCGCCTCECEEEETTSHC---HHHHHHHH
T ss_pred ecCCeEEEEcCCCcChHHHHHHH----HhcCChHHHHHHHHHhhCcccCCccccCCeeEEEEEecccch---hHHHHHHH
Confidence 99999998622 1243222 22343 345555544432111111223344566666544332 11344555
Q ss_pred HHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeC
Q 003145 740 HLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGS 814 (844)
Q Consensus 740 ~L~~~~~~~~~~~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgn 814 (844)
.+ .. .+..+.++ ++...++|.|+++|||.|+++|+++++ ++.+.++++|| +.|| ||. ..+|.|||
T Consensus 139 ~l-~~--~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~------~~~~~vl~aGD-SgND~~mL~~~~~~vvV~N 208 (247)
T PF05116_consen 139 RL-RQ--RGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWG------IPPEQVLVAGD-SGNDLEMLEGGDHGVVVGN 208 (247)
T ss_dssp HH-HC--CTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--------GGGEEEEES-SGGGHHHHCCSSEEEE-TT
T ss_pred HH-HH--cCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhC------CCHHHEEEEeC-CCCcHHHHcCcCCEEEEcC
Confidence 55 22 23345555 467899999999999999999999998 78899999999 8899 999 57999999
Q ss_pred CCCcchhh-----------hcCCHHHHHHHHHHHhhcc
Q 003145 815 SINSLSKE-----------KKRKVHQLFGIFLRFSYSG 841 (844)
Q Consensus 815 a~~~~a~~-----------~l~~~~~v~~~l~~~~~~~ 841 (844)
+.+++.+. .+++-+-..++|+.|-..|
T Consensus 209 a~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~~~~ 246 (247)
T PF05116_consen 209 AQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQHFG 246 (247)
T ss_dssp S-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHHHTT
T ss_pred CCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHHHcC
Confidence 98881111 2455566677888887766
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.8e-15 Score=172.01 Aligned_cols=285 Identities=15% Similarity=0.132 Sum_probs=175.3
Q ss_pred HHHHhhCCCCCEEEEeCccchhHHHHHHh-cCCCCeEEEEEecCCC-ChhhhhcCCccHHHHHhhh-cCCEEEEecHHHH
Q 003145 223 DVVNKHYKDGDVVWCHDYHLMFLPKCLKE-YNSDMKVGWFLHTPFP-SSEIHRTLPSRSDLLRAVL-AADLVGFHTYDYA 299 (844)
Q Consensus 223 ~~i~~~~~~~DiVwvHDyhl~llp~~lr~-~~~~~~i~~flH~Pfp-~~e~~r~lp~r~~ll~~ll-~aDlIgf~t~~~~ 299 (844)
.++.+..+| |+|++|.+.++ |.++.. +..++|+.+..|.-.. +...++.+ ..+.+.++ .+|.|..++....
T Consensus 117 ~~~l~~~~P-d~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~~~~ 190 (425)
T PRK05749 117 RRFLRFWRP-KLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSEEDA 190 (425)
T ss_pred HHHHHhhCC-CEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCHHHH
Confidence 334455565 89998877765 444432 2336777766554222 12222211 23333333 4799999998877
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh-CCCcEEEEEecccccCCH
Q 003145 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGI 378 (844)
Q Consensus 300 ~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld~~KGi 378 (844)
+.+.+ +|.. .. +.++|++ +.+.+.+. ........+++.+ +++++++++++. .|+.
T Consensus 191 ~~l~~-----~g~~-----------~~-i~vi~n~-~~d~~~~~----~~~~~~~~~r~~~~~~~~vil~~~~~--~~~~ 246 (425)
T PRK05749 191 ERFLA-----LGAK-----------NE-VTVTGNL-KFDIEVPP----ELAARAATLRRQLAPNRPVWIAASTH--EGEE 246 (425)
T ss_pred HHHHH-----cCCC-----------CC-cEecccc-cccCCCCh----hhHHHHHHHHHHhcCCCcEEEEeCCC--chHH
Confidence 77653 2221 22 4566653 33322111 0112234566666 678899999875 6889
Q ss_pred HHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHH-HHHHHHHHHHHHHhhcc---cCC--C--CcccEEEeCCCCCH
Q 003145 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEY-QRLTSQVHEIVGRINGR---FGT--L--TAVPIHHLDRSLDF 450 (844)
Q Consensus 379 ~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~-~~l~~~l~~lv~~IN~~---~g~--~--~~~pv~~~~~~v~~ 450 (844)
..+|+||.++++++|+++ |+++| ++++. ++++ +++.+.+-. +.. . .-..|. +.+ +.
T Consensus 247 ~~ll~A~~~l~~~~~~~~----liivG-----~g~~r~~~l~----~~~~~~gl~~~~~~~~~~~~~~~~v~-l~~--~~ 310 (425)
T PRK05749 247 ELVLDAHRALLKQFPNLL----LILVP-----RHPERFKEVE----ELLKKAGLSYVRRSQGEPPSADTDVL-LGD--TM 310 (425)
T ss_pred HHHHHHHHHHHHhCCCcE----EEEcC-----CChhhHHHHH----HHHHhCCCcEEEccCCCCCCCCCcEE-EEe--cH
Confidence 999999999988888754 77664 34443 3444 344332221 100 0 000122 222 35
Q ss_pred HHHHHHHHhCcEEEE-cCCCcCCChhHhhhhhcccCCCceEEEeCCCCch-h---hccCCeEEECCCCHHHHHHHHHHHh
Q 003145 451 PALCALYAVTDVALV-TSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA-Q---SLGAGAILVNPWNITEVANAIARAL 525 (844)
Q Consensus 451 ~el~aly~~ADv~v~-~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~-~---~lg~~g~lvnP~d~~~~A~ai~~aL 525 (844)
.++..+|+.||++++ +|+.||+|++++|||||| .|+|++...|.. + .+..+|.++.|.|++++|++|.+++
T Consensus 311 ~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G----~PVI~g~~~~~~~e~~~~~~~~g~~~~~~d~~~La~~l~~ll 386 (425)
T PRK05749 311 GELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFG----VPVISGPHTFNFKEIFERLLQAGAAIQVEDAEDLAKAVTYLL 386 (425)
T ss_pred HHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhC----CCEEECCCccCHHHHHHHHHHCCCeEEECCHHHHHHHHHHHh
Confidence 799999999999665 688899999999999996 788877654322 2 2235688888999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 003145 526 NMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 560 (844)
Q Consensus 526 ~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 560 (844)
++ ++.+.++.+++++++.++. .-+++.++.+.
T Consensus 387 ~~-~~~~~~m~~~a~~~~~~~~--~~~~~~~~~l~ 418 (425)
T PRK05749 387 TD-PDARQAYGEAGVAFLKQNQ--GALQRTLQLLE 418 (425)
T ss_pred cC-HHHHHHHHHHHHHHHHhCc--cHHHHHHHHHH
Confidence 85 4577888888888887652 33344444443
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.6e-16 Score=156.94 Aligned_cols=156 Identities=27% Similarity=0.356 Sum_probs=119.8
Q ss_pred CCCcEEEEEecccccCCHHHHHHHHHHHHHh-CcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcc
Q 003145 361 AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEE-NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439 (844)
Q Consensus 361 ~~~~vil~VdRld~~KGi~~~l~Af~~ll~~-~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~ 439 (844)
.++++|+++||+++.||+..+++|+..+.++ .|+ +.|+++|. ++.. ..+..++...+.. .
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~----~~l~i~G~-----~~~~----~~~~~~~~~~~~~------~ 73 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPN----YKLVIVGD-----GEYK----KELKNLIEKLNLK------E 73 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTT----EEEEEESH-----CCHH----HHHHHHHHHTTCG------T
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCC----eEEEEEcc-----cccc----ccccccccccccc------c
Confidence 4789999999999999999999999999875 554 55777762 1222 2233333333221 1
Q ss_pred cEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHH
Q 003145 440 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEV 517 (844)
Q Consensus 440 pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~ 517 (844)
.|.+ .+.++.+++..+|+.||++|.||..||||++++|||+|+ .|+|+|..+|..+.+ +.+|+++++.|++++
T Consensus 74 ~i~~-~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g----~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l 148 (172)
T PF00534_consen 74 NIIF-LGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACG----CPVIASDIGGNNEIINDGVNGFLFDPNDIEEL 148 (172)
T ss_dssp TEEE-EESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-----EEEEESSTHHHHHSGTTTSEEEESTTSHHHH
T ss_pred cccc-cccccccccccccccceeccccccccccccccccccccc----cceeeccccCCceeeccccceEEeCCCCHHHH
Confidence 3665 677779999999999999999999999999999999996 799999988888777 557899999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHH
Q 003145 518 ANAIARALNMSPEEREKRHWHNFT 541 (844)
Q Consensus 518 A~ai~~aL~m~~~er~~r~~~~~~ 541 (844)
+++|.+++.++ +.+..+.+++++
T Consensus 149 ~~~i~~~l~~~-~~~~~l~~~~~~ 171 (172)
T PF00534_consen 149 ADAIEKLLNDP-ELRQKLGKNARE 171 (172)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHCCH-HHHHHHHHHhcC
Confidence 99999999976 455555555544
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.2e-16 Score=164.17 Aligned_cols=187 Identities=17% Similarity=0.170 Sum_probs=117.7
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc--eEEeecce
Q 003145 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAENGM 670 (844)
Q Consensus 593 Li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l--~liaenG~ 670 (844)
+|++|+||||++.. .++++++++|++|.+ .|+.|+++|||+...+..++.++++ ++|++||+
T Consensus 1 li~~DlDGTLl~~~---------------~~~~~~~~ai~~l~~-~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa 64 (225)
T TIGR02461 1 VIFTDLDGTLLPPG---------------YEPGPAREALEELKD-LGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGG 64 (225)
T ss_pred CEEEeCCCCCcCCC---------------CCchHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCc
Confidence 58999999999852 245679999999998 5999999999999999999988864 79999999
Q ss_pred EEEecCC-------------eeeecccccCChHHHHHHHHHHHHHHhcCCCceEee---ccceEEEEeecCChhh-----
Q 003145 671 FLRCTTG-------------KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQ---RETSLVWNYKYADVEF----- 729 (844)
Q Consensus 671 ~i~~~~~-------------~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~---k~~sl~~hy~~~d~e~----- 729 (844)
++..... .. .++....+ .+.+.++++...++.+-.++.. ...+ .+....+..
T Consensus 65 ~I~~~~~~~~~~~~~~~~~~~~-~i~~~~l~---~~~~~~il~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 137 (225)
T TIGR02461 65 AIFIPRGYFPFPVGAGREVGNY-EVIELGKP---VAKIRAALKEAENEYGLKYYGNSTAEEVE---KLTGLPRELAPLAK 137 (225)
T ss_pred EEEecCccccccccccccCCCe-EEEEcCCC---HHHHHHHHHHHHHhcCccchhcCCHHHHH---HHHCcCHHHHHHHH
Confidence 9986321 11 01111223 2334444443322111110000 0000 000000000
Q ss_pred ----------h-HHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEee
Q 003145 730 ----------G-RIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 798 (844)
Q Consensus 730 ----------~-~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD 798 (844)
+ ..+..++.+.+ . ...+.+.++..++++. .++|||.|++.+++.++. ..+...+++|||
T Consensus 138 ~~~~~ki~~~~~~e~~~~~~~~~-~----~~~~~~~~s~~~~~i~-~~~sK~~al~~l~~~~~~----~~~~~~~i~~GD 207 (225)
T TIGR02461 138 RREYSETIFLWSREGWEAILVTA-R----ARGLKYTHGGRFYTVH-GGSDKGKAIKRLLDLYKL----RPGAIESVGLGD 207 (225)
T ss_pred hhhcCCcccCCCHHHHHHHHHHH-H----HcCCcEEECCEEEEEC-CCCCHHHHHHHHHHHhcc----ccCcccEEEEcC
Confidence 0 01112333333 2 2346777777778864 599999999999998862 124568999999
Q ss_pred CCCch--hhc--cCcEEEe
Q 003145 799 FLGKV--LLT--QFLIQVG 813 (844)
Q Consensus 799 ~~~nD--Mf~--g~~Iavg 813 (844)
+.|| ||+ +++|+||
T Consensus 208 -~~nD~~ml~~ag~~v~v~ 225 (225)
T TIGR02461 208 -SENDFPMFEVVDLAFLVG 225 (225)
T ss_pred -CHHHHHHHHhCCCcEecC
Confidence 9999 999 8999887
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.9e-15 Score=156.75 Aligned_cols=191 Identities=15% Similarity=0.123 Sum_probs=126.4
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc--eEEeec
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAEN 668 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l--~liaen 668 (844)
.|+||+|+||||++.. ...++.++++|++|.+ .|+.|+++|||....+..+++.+++ ++|++|
T Consensus 1 ~KLIftDLDGTLLd~~--------------~~~~~~a~~aL~~Lk~-~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eN 65 (302)
T PRK12702 1 MRLVLSSLDGSLLDLE--------------FNSYGAARQALAALER-RSIPLVLYSLRTRAQLEHLCRQLRLEHPFICED 65 (302)
T ss_pred CcEEEEeCCCCCcCCC--------------CcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeC
Confidence 4799999999999862 3467889999999998 5999999999999999999998854 799999
Q ss_pred ceEEEecCCeeeec--------c-cc-------cCChHHHHHHHHHHHHHHhcCC--------------CceE------e
Q 003145 669 GMFLRCTTGKWMTT--------M-PE-------HLNMEWVDSLKHVFEYFTERTP--------------RSHF------E 712 (844)
Q Consensus 669 G~~i~~~~~~w~~~--------~-~~-------~~~~~w~~~v~~i~~~~~~rt~--------------gs~i------E 712 (844)
|+.|..... |... . +. ..-..|+..+.++-+.+..... |... .
T Consensus 66 GA~I~~p~~-~~~~~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~ 144 (302)
T PRK12702 66 GSAIYVPEH-YFPAGILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQ 144 (302)
T ss_pred CcEEEEccc-cccccccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHH
Confidence 999985322 3210 0 00 0012334433333332211111 1111 1
Q ss_pred eccceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEe------------------C---CCCHHH
Q 003145 713 QRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRA------------------V---GVTKGA 771 (844)
Q Consensus 713 ~k~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p------------------~---gvnKG~ 771 (844)
.+++|-.+.+...+... .+.+ ...++.+++|..++.+.. . +++||.
T Consensus 145 ~Re~SEp~~w~~~~~~~--------~~~~-----~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~ 211 (302)
T PRK12702 145 KREYSEIFSYSGDPARL--------REAF-----AQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQ 211 (302)
T ss_pred hccCCcceEecCCHHHH--------HHHH-----HHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHH
Confidence 23455555554432211 2223 223678889888887776 5 899999
Q ss_pred HHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCC
Q 003145 772 AIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSS 815 (844)
Q Consensus 772 al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna 815 (844)
|++.|.+.+.... ..=.++++|| +.|| |++ .++|.|-+.
T Consensus 212 A~~~L~~~y~~~~----~~~~tiaLGD-spND~~mLe~~D~~vvi~~~ 254 (302)
T PRK12702 212 AVQLLLDCYQRHL----GPIKALGIGC-SPPDLAFLRWSEQKVVLPSP 254 (302)
T ss_pred HHHHHHHHHHhcc----CCceEEEecC-ChhhHHHHHhCCeeEEecCC
Confidence 9999999887210 1227899999 9999 999 678877554
|
|
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.60 E-value=2e-14 Score=152.48 Aligned_cols=202 Identities=15% Similarity=0.153 Sum_probs=147.5
Q ss_pred eEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh-CCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEE
Q 003145 324 RLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLL 402 (844)
Q Consensus 324 ~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv 402 (844)
...+|.++|+.|+++.|.|.... +. .+...|+.++||-|+||++.+++.+.++.+++|+.+ ++
T Consensus 167 ~p~kvsvIPnAv~~~~f~P~~~~------------~~S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~~~p~vr----fi 230 (426)
T KOG1111|consen 167 APAKVSVIPNAVVTHTFTPDAAD------------KPSADIITIVVASRLVYRKGIDLLLEIIPSVCDKHPEVR----FI 230 (426)
T ss_pred CHhHeeeccceeeccccccCccc------------cCCCCeeEEEEEeeeeeccchHHHHHHHHHHHhcCCCee----EE
Confidence 45689999999999999884321 12 345889999999999999999999999999999865 87
Q ss_pred EEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhc
Q 003145 403 QIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482 (844)
Q Consensus 403 ~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~ 482 (844)
++| |||..-.+++-+++. +- ..++. +.|.++++++...|...|||+.||+.|.||++++||++|
T Consensus 231 i~G-----DGPk~i~lee~lEk~----~l------~~rV~-~lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaSc 294 (426)
T KOG1111|consen 231 IIG-----DGPKRIDLEEMLEKL----FL------QDRVV-MLGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASC 294 (426)
T ss_pred Eec-----CCcccchHHHHHHHh----hc------cCceE-EecccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHhC
Confidence 775 556544445444433 11 12566 489999999999999999999999999999999999999
Q ss_pred ccCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHH
Q 003145 483 QDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELND 561 (844)
Q Consensus 483 ~~~~~g~lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~ 561 (844)
| .++|.+..+|..+.|-++-+...+-+++++++++.++++.-... -....+.+ +-++|..-+++-..-..+
T Consensus 295 G----L~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~ai~~~~~~----p~~~h~~v~~~y~w~dVa~rTekvy~r 366 (426)
T KOG1111|consen 295 G----LPVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKAITKLRTL----PLEFHDRVKKMYSWKDVAERTEKVYDR 366 (426)
T ss_pred C----CEEEEeecCCccccCCccceeccCCChHHHHHHHHHHHHHhccC----chhHHHHHHHhccHHHHHHHHHHHHHH
Confidence 5 67777888888888833324455667899999999988632111 01112223 235666666666555555
Q ss_pred hHHH
Q 003145 562 TVVE 565 (844)
Q Consensus 562 ~~~~ 565 (844)
+.+.
T Consensus 367 ~~~t 370 (426)
T KOG1111|consen 367 AATT 370 (426)
T ss_pred Hhhc
Confidence 5443
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.59 E-value=2e-13 Score=154.14 Aligned_cols=264 Identities=17% Similarity=0.133 Sum_probs=164.1
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHH-HhhhcCCEEEEecHHHHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLL-RAVLAADLVGFHTYDYARHFVSACTRI 309 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll-~~ll~aDlIgf~t~~~~~~Fl~~~~~~ 309 (844)
+..++|.+..-...+... .+..++++-+|-.|+..... -+....+. ..+-.||+|...+....+.+..
T Consensus 102 ~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~~--~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~----- 170 (373)
T cd04950 102 GRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPGG--PPELLEAERRLLKRADLVFTTSPSLYEAKRR----- 170 (373)
T ss_pred CCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCCC--CHHHHHHHHHHHHhCCEEEECCHHHHHHHhh-----
Confidence 556778875544444444 45677777766544432110 01111122 2234689988777655433211
Q ss_pred hCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHH
Q 003145 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 389 (844)
Q Consensus 310 l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll 389 (844)
+ + .++.++|+|+|.+.|.+....+.. ...+ ...++++|+++|++.+.+++. +|.++ .
T Consensus 171 -----------~-~--~~i~~i~ngvd~~~f~~~~~~~~~---~~~~--~~~~~~~i~y~G~l~~~~d~~-ll~~l---a 227 (373)
T cd04950 171 -----------L-N--PNVVLVPNGVDYEHFAAARDPPPP---PADL--AALPRPVIGYYGAIAEWLDLE-LLEAL---A 227 (373)
T ss_pred -----------C-C--CCEEEcccccCHHHhhcccccCCC---hhHH--hcCCCCEEEEEeccccccCHH-HHHHH---H
Confidence 1 1 357889999999999764321110 0111 114678999999999966654 44443 3
Q ss_pred HhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCC-
Q 003145 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL- 468 (844)
Q Consensus 390 ~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~- 468 (844)
+.+|+++ |++||... ... +. .++ .. ...|++ .|.++.+++.++|+.||++++|+.
T Consensus 228 ~~~p~~~----~vliG~~~--~~~---~~----~~~----~~------~~nV~~-~G~~~~~~l~~~l~~~Dv~l~P~~~ 283 (373)
T cd04950 228 KARPDWS----FVLIGPVD--VSI---DP----SAL----LR------LPNVHY-LGPKPYKELPAYLAGFDVAILPFRL 283 (373)
T ss_pred HHCCCCE----EEEECCCc--Ccc---Ch----hHh----cc------CCCEEE-eCCCCHHHHHHHHHhCCEEecCCcc
Confidence 4577764 88787431 000 00 111 00 123664 799999999999999999999986
Q ss_pred ----CcCCChhHhhhhhcccCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 003145 469 ----RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (844)
Q Consensus 469 ----~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~ 544 (844)
.+++++.++|||||| .|+|.|....+.+. +.+++ +.+.|+++++++|.++|..+..++..+. ...++
T Consensus 284 ~~~~~~~~P~Kl~EylA~G----~PVVat~~~~~~~~-~~~~~-~~~~d~~~~~~ai~~~l~~~~~~~~~~~---~~~~~ 354 (373)
T cd04950 284 NELTRATSPLKLFEYLAAG----KPVVATPLPEVRRY-EDEVV-LIADDPEEFVAAIEKALLEDGPARERRR---LRLAA 354 (373)
T ss_pred chhhhcCCcchHHHHhccC----CCEEecCcHHHHhh-cCcEE-EeCCCHHHHHHHHHHHHhcCCchHHHHH---HHHHH
Confidence 357899999999996 78887775544333 23344 4467999999999998765543433322 22688
Q ss_pred hcCHHHHHHHHHHHHHH
Q 003145 545 THTAQEWAETFVSELND 561 (844)
Q Consensus 545 ~~~~~~W~~~fl~~l~~ 561 (844)
+|||+.=++.++..|..
T Consensus 355 ~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 355 QNSWDARAAEMLEALQE 371 (373)
T ss_pred HCCHHHHHHHHHHHHHh
Confidence 99999999988866653
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.7e-12 Score=145.31 Aligned_cols=194 Identities=10% Similarity=0.054 Sum_probs=129.0
Q ss_pred EEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccccCCHHHHHHHHHHHHHh----CcCCCCc
Q 003145 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEE----NSDWRGK 398 (844)
Q Consensus 326 ~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~l~Af~~ll~~----~P~~~~~ 398 (844)
.+|.+++++||.+.+.+. . ....+|+++ +++++|+.+||....|++..+++++..++.. .|+
T Consensus 173 ~ki~v~g~~v~~~f~~~~---~----~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~---- 241 (382)
T PLN02605 173 SQIRVYGLPIRPSFARAV---R----PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPI---- 241 (382)
T ss_pred HHEEEECcccCHhhccCC---C----CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCC----
Confidence 467778899987543321 1 122456666 3678999999999999999999999876521 233
Q ss_pred eEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhh
Q 003145 399 VVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYE 478 (844)
Q Consensus 399 v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~E 478 (844)
+.++++++. ++ .++++++++.. + ..|. +.|.++ ++..+|++||++|.+| .|++++|
T Consensus 242 ~~~~vi~G~----~~---~~~~~L~~~~~--~--------~~v~-~~G~~~--~~~~l~~aaDv~V~~~----g~~ti~E 297 (382)
T PLN02605 242 GQVVVICGR----NK---KLQSKLESRDW--K--------IPVK-VRGFVT--NMEEWMGACDCIITKA----GPGTIAE 297 (382)
T ss_pred ceEEEEECC----CH---HHHHHHHhhcc--c--------CCeE-EEeccc--cHHHHHHhCCEEEECC----CcchHHH
Confidence 333334421 22 22333333210 1 1355 467764 7999999999999866 3789999
Q ss_pred hhhcccCCCceEEEeCC-----CCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHH
Q 003145 479 FVACQDLKKGVLILSEF-----AGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAE 553 (844)
Q Consensus 479 ama~~~~~~g~lVlSe~-----~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 553 (844)
||||+ .|+|++.. .|.++.+-.+|.-+.+.|+++++++|.++|.++++.++++.+++++....+.+..-++
T Consensus 298 Ama~g----~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~~ 373 (382)
T PLN02605 298 ALIRG----LPIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMSENALKLARPEAVFDIVH 373 (382)
T ss_pred HHHcC----CCEEEecCCCccchhhHHHHHhCCceeecCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchHHHHHH
Confidence 99996 79999875 2334444123333345899999999999999755677777777788877777666666
Q ss_pred HHHHH
Q 003145 554 TFVSE 558 (844)
Q Consensus 554 ~fl~~ 558 (844)
.+++.
T Consensus 374 ~l~~~ 378 (382)
T PLN02605 374 DLHEL 378 (382)
T ss_pred HHHHH
Confidence 55443
|
|
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.3e-12 Score=145.38 Aligned_cols=220 Identities=15% Similarity=0.130 Sum_probs=157.3
Q ss_pred EEEEecccChhHHhhhhcCCchHHHHHHHHHH--h-CCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCC-CceEEEE
Q 003145 328 VAAFPIGIDSERFIRALEINPVQVHIKELQET--F-AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWR-GKVVLLQ 403 (844)
Q Consensus 328 v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~--~-~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~-~~v~Lv~ 403 (844)
+.+...+||.+.+.+...... .+.....|.. . ..+.++..+-|+.|-||+...|.||..+...-|+.. ....++.
T Consensus 236 ~~~~y~ei~~s~~~~~~~~~~-~~~~~~~r~~~~v~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~ 314 (495)
T KOG0853|consen 236 ITSTYPEIDGSWFTYGQYESH-LELRLPVRLYRGVSGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVV 314 (495)
T ss_pred cceeeccccchhccccccccc-hhcccccceeeeecccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEE
Confidence 556677788776653111000 0000011111 1 237888999999999999999999999988775411 1344554
Q ss_pred EEcC-CCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhc
Q 003145 404 IAVP-TRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482 (844)
Q Consensus 404 i~~p-~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~ 482 (844)
.+.+ +.+...+..++..++.+++++.+. +| .+++|....++.+...++..+.+.+.++..|.||+|++|||||
T Consensus 315 ~g~~G~d~~~sen~~~~~el~~lie~~~l-~g-----~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~ 388 (495)
T KOG0853|consen 315 AGSRGYDERDSENVEYLKELLSLIEEYDL-LG-----QFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMAC 388 (495)
T ss_pred ecCCCccccchhhHHHHHHHHHHHHHhCc-cC-----ceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhc
Confidence 5532 333344555556677777766432 12 2455677888888888889999999999889999999999999
Q ss_pred ccCCCceEEEeCCCCchhhc--cCCeEEECCCCHH---HHHHHHHHHhcCCHHHHHHHHHHHHHHHHh-cCHHHHHHHHH
Q 003145 483 QDLKKGVLILSEFAGAAQSL--GAGAILVNPWNIT---EVANAIARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETFV 556 (844)
Q Consensus 483 ~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~---~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~fl 556 (844)
+ .|+|++..+|..|.+ |.+|++++| +.+ .+|++|.++.+++. .+.++.+.++++|++ |+|+...+++.
T Consensus 389 g----lPvvAt~~GGP~EiV~~~~tG~l~dp-~~e~~~~~a~~~~kl~~~p~-l~~~~~~~G~~rV~e~fs~~~~~~ri~ 462 (495)
T KOG0853|consen 389 G----LPVVATNNGGPAEIVVHGVTGLLIDP-GQEAVAELADALLKLRRDPE-LWARMGKNGLKRVKEMFSWQHYSERIA 462 (495)
T ss_pred C----CCEEEecCCCceEEEEcCCcceeeCC-chHHHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 6 899999999999988 789999999 666 59999999998765 588888999999977 88866555555
Q ss_pred HHHH
Q 003145 557 SELN 560 (844)
Q Consensus 557 ~~l~ 560 (844)
+-+.
T Consensus 463 ~~~~ 466 (495)
T KOG0853|consen 463 SVLG 466 (495)
T ss_pred HHhH
Confidence 5444
|
|
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.2e-10 Score=123.17 Aligned_cols=310 Identities=12% Similarity=0.185 Sum_probs=196.1
Q ss_pred HHHHHHHHHHHHHHHHh---hCC-CCCEEEE--eCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHh
Q 003145 211 FAAYIKANQMFADVVNK---HYK-DGDVVWC--HDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA 284 (844)
Q Consensus 211 ~~~Y~~vN~~fa~~i~~---~~~-~~DiVwv--HDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ 284 (844)
|..+--.-|+.+..|+. +++ |+|+ || -.|.+. +|.+-+ +.+.|||...|.|--|.+++..+-.|..- +
T Consensus 126 ~~hfTllgQaigsmIl~~Eai~r~~Pdi-~IDtMGY~fs-~p~~r~--l~~~~V~aYvHYP~iS~DML~~l~qrq~s--~ 199 (465)
T KOG1387|consen 126 WKHFTLLGQAIGSMILAFEAIIRFPPDI-FIDTMGYPFS-YPIFRR--LRRIPVVAYVHYPTISTDMLKKLFQRQKS--G 199 (465)
T ss_pred ccceehHHHHHHHHHHHHHHHHhCCchh-eEecCCCcch-hHHHHH--HccCceEEEEecccccHHHHHHHHhhhhc--c
Confidence 44444444444444432 234 5564 66 445443 343322 45799999999999888877654432111 1
Q ss_pred hhcCCEEEEecHHHHHHHHHH------HHHHhCcccC--CCce-e-eCCeEEEEEEEecccChhHHhhhhcCCchHHHHH
Q 003145 285 VLAADLVGFHTYDYARHFVSA------CTRILGFEGT--PEGV-E-DQGRLTRVAAFPIGIDSERFIRALEINPVQVHIK 354 (844)
Q Consensus 285 ll~aDlIgf~t~~~~~~Fl~~------~~~~l~~~~~--~~~v-~-~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~ 354 (844)
+ ..+----|-|.|..- |..+.-+..+ .+.+ + ++. ..+.++.+-.+++.+.....++
T Consensus 200 ~-----l~~~KlaY~rlFa~lY~~~G~~ad~vm~NssWT~nHI~qiW~~--~~~~iVyPPC~~e~lks~~~te------- 265 (465)
T KOG1387|consen 200 I-----LVWGKLAYWRLFALLYQSAGSKADIVMTNSSWTNNHIKQIWQS--NTCSIVYPPCSTEDLKSKFGTE------- 265 (465)
T ss_pred h-----hhhHHHHHHHHHHHHHHhccccceEEEecchhhHHHHHHHhhc--cceeEEcCCCCHHHHHHHhccc-------
Confidence 1 111112344444321 1111111110 1111 1 222 2344444446766554332210
Q ss_pred HHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHHhCcC--CCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcc
Q 003145 355 ELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSD--WRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGR 432 (844)
Q Consensus 355 ~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~--~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~ 432 (844)
-+....+|+++.+.|.|+.. .|+-++.++.+.|. ....+.|+++| .+|+.. ++ +.-..++.++.+++-.
T Consensus 266 -----~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivG-ScRnee-D~-ervk~Lkd~a~~L~i~ 336 (465)
T KOG1387|consen 266 -----GERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVG-SCRNEE-DE-ERVKSLKDLAEELKIP 336 (465)
T ss_pred -----CCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEe-ccCChh-hH-HHHHHHHHHHHhcCCc
Confidence 12457899999999999999 78888888888887 44568888776 466542 22 2334566666666643
Q ss_pred cCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchh-hc----c-CCe
Q 003145 433 FGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ-SL----G-AGA 506 (844)
Q Consensus 433 ~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~-~l----g-~~g 506 (844)
..|.| .-+++.+++..+|..|.+.+.+-..|-||+.+.||||+| ..+|+-..+|..- ++ | .+|
T Consensus 337 ------~~v~F-~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAG----lIpi~h~SgGP~lDIV~~~~G~~tG 405 (465)
T KOG1387|consen 337 ------KHVQF-EKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAG----LIPIVHNSGGPLLDIVTPWDGETTG 405 (465)
T ss_pred ------cceEE-EecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcC----ceEEEeCCCCCceeeeeccCCccce
Confidence 13664 788999999999999999999999999999999999994 3444444444332 22 4 468
Q ss_pred EEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 003145 507 ILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (844)
Q Consensus 507 ~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (844)
++. -+.++.|++|.+++.+..++|..+.+.++..+.+++-+...++|.+.+...
T Consensus 406 Fla--~t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kl 459 (465)
T KOG1387|consen 406 FLA--PTDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICKL 459 (465)
T ss_pred eec--CChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHh
Confidence 887 367899999999999999999888888899999999999888888666554
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.9e-11 Score=130.27 Aligned_cols=199 Identities=25% Similarity=0.336 Sum_probs=145.3
Q ss_pred EEEEEecccChhHHhhh-hcCCchHHHHHHHHHHhCC--CcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEE
Q 003145 327 RVAAFPIGIDSERFIRA-LEINPVQVHIKELQETFAG--RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 403 (844)
Q Consensus 327 ~v~v~P~GID~~~f~~~-~~~~~~~~~~~~lr~~~~~--~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~ 403 (844)
++.++|+|+|.+.+... ... ..+ ..+++++||+.+.||+...++|+..+....++ +.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~ 235 (381)
T COG0438 173 KIVVIPNGIDTEKFAPARIGL-------------LPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVI 235 (381)
T ss_pred CceEecCCcCHHHcCccccCC-------------CcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEE
Confidence 57788999999987642 000 012 36899999999999999999999999877665 45766
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcc
Q 003145 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (844)
Q Consensus 404 i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~ 483 (844)
+|..... ...+.. ++...+.. ..|.+ .|.++.+++..+|+.||++++||..||||++++|||+||
T Consensus 236 ~g~~~~~----~~~~~~----~~~~~~~~------~~v~~-~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g 300 (381)
T COG0438 236 VGDGPER----REELEK----LAKKLGLE------DNVKF-LGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAG 300 (381)
T ss_pred EcCCCcc----HHHHHH----HHHHhCCC------CcEEE-ecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhcC
Confidence 6643211 112222 33333221 13554 888888899999999999999999999999999999996
Q ss_pred cCCCceEEEeCCCCchhhccCC--eEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Q 003145 484 DLKKGVLILSEFAGAAQSLGAG--AILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELN 560 (844)
Q Consensus 484 ~~~~g~lVlSe~~G~~~~lg~~--g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~ 560 (844)
.|+|+|...|..+.+..+ |+++++.|.+++++++..++++. +.+.......++.+ ..+++..-+..++..+.
T Consensus 301 ----~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (381)
T COG0438 301 ----TPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVEEEFSWERIAEQLLELYE 375 (381)
T ss_pred ----CcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 788999999888888433 88888888999999999999887 34444444344444 57888887776666555
Q ss_pred Hh
Q 003145 561 DT 562 (844)
Q Consensus 561 ~~ 562 (844)
..
T Consensus 376 ~~ 377 (381)
T COG0438 376 EL 377 (381)
T ss_pred HH
Confidence 43
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.2e-10 Score=129.50 Aligned_cols=270 Identities=13% Similarity=0.078 Sum_probs=160.9
Q ss_pred HHHHHhhCCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHH
Q 003145 222 ADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARH 301 (844)
Q Consensus 222 a~~i~~~~~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~ 301 (844)
..++.+..+| |+|+.| +....++.+.+....++|+...+ +.|-. + ...+. -.+|.+...+....+.
T Consensus 96 l~~~l~~~~p-D~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~-td~~~-------~-~~~~~---~~ad~i~~~s~~~~~~ 161 (380)
T PRK13609 96 LKLLLQAEKP-DIVINT-FPIIAVPELKKQTGISIPTYNVL-TDFCL-------H-KIWVH---REVDRYFVATDHVKKV 161 (380)
T ss_pred HHHHHHHhCc-CEEEEc-ChHHHHHHHHHhcCCCCCeEEEe-CCCCC-------C-ccccc---CCCCEEEECCHHHHHH
Confidence 3444444554 899885 55556776666655667765333 22211 0 01111 1578888777654444
Q ss_pred HHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhC---CCc-EEEEEecccccCC
Q 003145 302 FVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---GRK-VMLGVDRLDMIKG 377 (844)
Q Consensus 302 Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~-vil~VdRld~~KG 377 (844)
+.+ .|.+ ..++.++++.++. .|.+.. + ...++++++ +++ +++..|++...||
T Consensus 162 l~~-----~gi~-----------~~ki~v~G~p~~~-~f~~~~---~----~~~~~~~~~l~~~~~~il~~~G~~~~~k~ 217 (380)
T PRK13609 162 LVD-----IGVP-----------PEQVVETGIPIRS-SFELKI---N----PDIIYNKYQLCPNKKILLIMAGAHGVLGN 217 (380)
T ss_pred HHH-----cCCC-----------hhHEEEECcccCh-HHcCcC---C----HHHHHHHcCCCCCCcEEEEEcCCCCCCcC
Confidence 332 1211 2244454443432 343211 1 123455552 444 4556789999999
Q ss_pred HHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHH
Q 003145 378 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY 457 (844)
Q Consensus 378 i~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly 457 (844)
+..+++++.. .|+ +.+++++++ +.+ +++++++++...+ ..|++ .|.+ +++..+|
T Consensus 218 ~~~li~~l~~----~~~----~~~viv~G~---~~~----~~~~l~~~~~~~~--------~~v~~-~g~~--~~~~~l~ 271 (380)
T PRK13609 218 VKELCQSLMS----VPD----LQVVVVCGK---NEA----LKQSLEDLQETNP--------DALKV-FGYV--ENIDELF 271 (380)
T ss_pred HHHHHHHHhh----CCC----cEEEEEeCC---CHH----HHHHHHHHHhcCC--------CcEEE-Eech--hhHHHHH
Confidence 9998888742 354 446666532 222 2344444443322 13665 5766 4688999
Q ss_pred HhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeC-CCCc----hhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHH
Q 003145 458 AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-FAGA----AQSLGAGAILVNPWNITEVANAIARALNMSPEER 532 (844)
Q Consensus 458 ~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe-~~G~----~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er 532 (844)
+.||+++. ++.|++++|||||+ .|+|++. ..|. +..+...|..+.+.|.++++++|.++++++ +.+
T Consensus 272 ~~aD~~v~----~~gg~t~~EA~a~g----~PvI~~~~~~g~~~~n~~~~~~~G~~~~~~~~~~l~~~i~~ll~~~-~~~ 342 (380)
T PRK13609 272 RVTSCMIT----KPGGITLSEAAALG----VPVILYKPVPGQEKENAMYFERKGAAVVIRDDEEVFAKTEALLQDD-MKL 342 (380)
T ss_pred HhccEEEe----CCCchHHHHHHHhC----CCEEECCCCCCcchHHHHHHHhCCcEEEECCHHHHHHHHHHHHCCH-HHH
Confidence 99999874 45589999999996 7888875 3442 122323455555789999999999999864 466
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHH
Q 003145 533 EKRHWHNFTHVTTHTAQEWAETFVSELNDTVV 564 (844)
Q Consensus 533 ~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~ 564 (844)
.++.++.++....++++..++.+++.+....+
T Consensus 343 ~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~~~ 374 (380)
T PRK13609 343 LQMKEAMKSLYLPEPADHIVDDILAENHVEPN 374 (380)
T ss_pred HHHHHHHHHhCCCchHHHHHHHHHHhhhhhhh
Confidence 66666667777778899999888877665543
|
|
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.2e-10 Score=130.45 Aligned_cols=252 Identities=15% Similarity=0.068 Sum_probs=158.2
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHh
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (844)
..|+|+.|.....+.+.++ .+..+.|+.++.|..+|... +.++- ..+|.+...++.- +.
T Consensus 91 ~pDvv~~~~~~~~~~~~~~-~~~~~~p~v~~~~~~~~~~~--------~r~~~--~~~d~ii~~~~~~---~~------- 149 (357)
T PRK00726 91 KPDVVVGFGGYVSGPGGLA-ARLLGIPLVIHEQNAVPGLA--------NKLLA--RFAKKVATAFPGA---FP------- 149 (357)
T ss_pred CCCEEEECCCcchhHHHHH-HHHcCCCEEEEcCCCCccHH--------HHHHH--HHhchheECchhh---hh-------
Confidence 3699999985544444433 34457788876665444210 11111 1345554433311 00
Q ss_pred CcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh-CCCcEEEEEecccccCCHHHHH-HHHHHH
Q 003145 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQKL-LAFEKF 388 (844)
Q Consensus 311 ~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld~~KGi~~~l-~Af~~l 388 (844)
+....++.++|+|||.+.+.+. .. . ..+ .. .+.++|+.+++....|++..++ +|+.++
T Consensus 150 -----------~~~~~~i~vi~n~v~~~~~~~~----~~-~--~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~ 209 (357)
T PRK00726 150 -----------EFFKPKAVVTGNPVREEILALA----AP-P--ARL--AGREGKPTLLVVGGSQGARVLNEAVPEALALL 209 (357)
T ss_pred -----------ccCCCCEEEECCCCChHhhccc----ch-h--hhc--cCCCCCeEEEEECCcHhHHHHHHHHHHHHHHh
Confidence 0123478999999998766431 10 0 011 11 3677889999999999987776 888877
Q ss_pred HHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCC
Q 003145 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (844)
Q Consensus 389 l~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~ 468 (844)
... | ..++++|. ++ .+++.+.+ . .+ . .|. +.+.+ +++..+|..||+++.+|
T Consensus 210 ~~~-~-----~~~~~~G~-----g~-~~~~~~~~----~-~~-------~-~v~-~~g~~--~~~~~~~~~~d~~i~~~- 260 (357)
T PRK00726 210 PEA-L-----QVIHQTGK-----GD-LEEVRAAY----A-AG-------I-NAE-VVPFI--DDMAAAYAAADLVICRA- 260 (357)
T ss_pred hhC-c-----EEEEEcCC-----Cc-HHHHHHHh----h-cC-------C-cEE-EeehH--hhHHHHHHhCCEEEECC-
Confidence 432 2 33555543 22 12232222 1 11 1 144 35665 68999999999999877
Q ss_pred CcCCChhHhhhhhcccCCCceEEEeCCCC--------chhhc--cCCeEEECCCC--HHHHHHHHHHHhcCCHHHHHHHH
Q 003145 469 RDGMNLVSYEFVACQDLKKGVLILSEFAG--------AAQSL--GAGAILVNPWN--ITEVANAIARALNMSPEEREKRH 536 (844)
Q Consensus 469 ~EG~~Lv~~Eama~~~~~~g~lVlSe~~G--------~~~~l--g~~g~lvnP~d--~~~~A~ai~~aL~m~~~er~~r~ 536 (844)
| +.+++|||+|+ .|+|++...| .++.+ +..|++++|.| +++++++|.+++++ ++.+.++.
T Consensus 261 --g-~~~~~Ea~~~g----~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~ 332 (357)
T PRK00726 261 --G-ASTVAELAAAG----LPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSD-PERLEAMA 332 (357)
T ss_pred --C-HHHHHHHHHhC----CCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcC-HHHHHHHH
Confidence 3 58899999996 6777765432 12334 34688998888 99999999999997 45777777
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHH
Q 003145 537 WHNFTHVTTHTAQEWAETFVSELN 560 (844)
Q Consensus 537 ~~~~~~v~~~~~~~W~~~fl~~l~ 560 (844)
+.++++.+.++...-++.+++.+.
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 333 EAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred HHHHhcCCcCHHHHHHHHHHHHhh
Confidence 777888888888888877776553
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.3e-10 Score=127.40 Aligned_cols=247 Identities=17% Similarity=0.147 Sum_probs=149.9
Q ss_pred HHhhCCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHH
Q 003145 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVS 304 (844)
Q Consensus 225 i~~~~~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~ 304 (844)
+.+..+ .|+|+.|.....+ +..+..+..++|+.++.|..||. .. +.++ ...+|.|...+....+.
T Consensus 84 ~i~~~~-pDvI~~~~~~~~~-~~~~~a~~~~~p~v~~~~~~~~~--~~------~~~~--~~~~~~vi~~s~~~~~~--- 148 (350)
T cd03785 84 ILKKFK-PDVVVGFGGYVSG-PVGLAAKLLGIPLVIHEQNAVPG--LA------NRLL--ARFADRVALSFPETAKY--- 148 (350)
T ss_pred HHHhcC-CCEEEECCCCcch-HHHHHHHHhCCCEEEEcCCCCcc--HH------HHHH--HHhhCEEEEcchhhhhc---
Confidence 334344 5999998755433 33333344467777655555542 10 1111 11267776655432211
Q ss_pred HHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccccCCHHHH
Q 003145 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQK 381 (844)
Q Consensus 305 ~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~ 381 (844)
-...++.++|+|+|.+.+.+.. . ++++ .++++|+.+++....|+...+
T Consensus 149 ------------------~~~~~~~~i~n~v~~~~~~~~~-------~----~~~~~~~~~~~~i~~~~g~~~~~~~~~~ 199 (350)
T cd03785 149 ------------------FPKDKAVVTGNPVREEILALDR-------E----RARLGLRPGKPTLLVFGGSQGARAINEA 199 (350)
T ss_pred ------------------CCCCcEEEECCCCchHHhhhhh-------h----HHhcCCCCCCeEEEEECCcHhHHHHHHH
Confidence 0124678899999988775321 0 2333 357788888888778887765
Q ss_pred H-HHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhC
Q 003145 382 L-LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 460 (844)
Q Consensus 382 l-~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~A 460 (844)
+ +|++.+.+ ++ +.++.++++ + +.+++++.++ +. + ..|++ .+.+ +++..+|+.|
T Consensus 200 l~~a~~~l~~--~~----~~~~~i~G~----g-~~~~l~~~~~----~~----~----~~v~~-~g~~--~~~~~~l~~a 253 (350)
T cd03785 200 VPEALAELLR--KR----LQVIHQTGK----G-DLEEVKKAYE----EL----G----VNYEV-FPFI--DDMAAAYAAA 253 (350)
T ss_pred HHHHHHHhhc--cC----eEEEEEcCC----c-cHHHHHHHHh----cc----C----CCeEE-eehh--hhHHHHHHhc
Confidence 5 77776642 22 334333321 2 2233443332 21 1 12553 5555 7899999999
Q ss_pred cEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCC--------chhhc--cCCeEEECCC--CHHHHHHHHHHHhcCC
Q 003145 461 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG--------AAQSL--GAGAILVNPW--NITEVANAIARALNMS 528 (844)
Q Consensus 461 Dv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G--------~~~~l--g~~g~lvnP~--d~~~~A~ai~~aL~m~ 528 (844)
|+++.+| | +.+++|||+|+ .|+|++...+ .++.+ +..|++++|. |.++++++|.++++.
T Consensus 254 d~~v~~s---g-~~t~~Eam~~G----~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~- 324 (350)
T cd03785 254 DLVISRA---G-ASTVAELAALG----LPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSD- 324 (350)
T ss_pred CEEEECC---C-HhHHHHHHHhC----CCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcC-
Confidence 9999877 3 57899999996 6788775543 13444 3468999987 899999999999974
Q ss_pred HHHHHHHHHHHHHHHHhcCHHH
Q 003145 529 PEEREKRHWHNFTHVTTHTAQE 550 (844)
Q Consensus 529 ~~er~~r~~~~~~~v~~~~~~~ 550 (844)
++.+.++..++++++..+...+
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~ 346 (350)
T cd03785 325 PERLKAMAEAARSLARPDAAER 346 (350)
T ss_pred HHHHHHHHHHHHhcCCCCHHHH
Confidence 5566667777777766555443
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.29 E-value=7.2e-11 Score=121.23 Aligned_cols=118 Identities=27% Similarity=0.320 Sum_probs=85.8
Q ss_pred EEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCC
Q 003145 368 GVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS 447 (844)
Q Consensus 368 ~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~ 447 (844)
++||+.+.||+..+++|+..+.++.|+ +.|+++|... + .. ..+..+.+. +. ...|.+ .+.
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~----~~~~i~G~~~--~-~~--~~~~~~~~~--------~~--~~~v~~-~~~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPD----LKLVIAGDGP--E-RE--YLEELLAAL--------LL--LDRVIF-LGG 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCC----eEEEEEeCCC--C-hH--HHHHHHHhc--------CC--cccEEE-eCC
Confidence 999999999999999999999888775 4588887532 1 11 111111111 11 124665 555
Q ss_pred C-CHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEE
Q 003145 448 L-DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILV 509 (844)
Q Consensus 448 v-~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lv 509 (844)
+ +.+++..+++.||+++.||..||++++++|||+|+ .|+|+|+..+..+.+ +.+|++|
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g----~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACG----LPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCC----CCEEEcCCCCcceEEECCCceEEC
Confidence 5 55666777777999999999999999999999996 899999999888766 4456653
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.22 E-value=6.2e-10 Score=123.82 Aligned_cols=181 Identities=15% Similarity=0.115 Sum_probs=118.0
Q ss_pred EEEecccChhHHhhhhcCCchHHHHHHHHHHh-CCCcEEEEEecccccCCHHHH-HHHHHHHHHhCcCCCCceEEEEEEc
Q 003145 329 AAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQK-LLAFEKFLEENSDWRGKVVLLQIAV 406 (844)
Q Consensus 329 ~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld~~KGi~~~-l~Af~~ll~~~P~~~~~v~Lv~i~~ 406 (844)
.++|+|||...+.+. .. ...+ .+ .+.++|+++||....|++... ++|++++.+. ++ .++.+++
T Consensus 153 ~~i~n~v~~~~~~~~---~~----~~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~----~~~~~~g 217 (348)
T TIGR01133 153 VLVGNPVRQEIRSLP---VP----RERF--GLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GI----QIVHQTG 217 (348)
T ss_pred eEEcCCcCHHHhccc---ch----hhhc--CCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--Cc----EEEEECC
Confidence 688999997665421 10 0111 12 367789999998888987664 4788776542 22 2333332
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCC
Q 003145 407 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLK 486 (844)
Q Consensus 407 p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~ 486 (844)
+++. +++ ++.+.+.+. ..+..+. ..++..+|+.||++|.+| | +.+++|||+|+
T Consensus 218 ----~~~~-~~l----~~~~~~~~l-------~~~v~~~----~~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g--- 270 (348)
T TIGR01133 218 ----KNDL-EKV----KNVYQELGI-------EAIVTFI----DENMAAAYAAADLVISRA---G-ASTVAELAAAG--- 270 (348)
T ss_pred ----cchH-HHH----HHHHhhCCc-------eEEecCc----ccCHHHHHHhCCEEEECC---C-hhHHHHHHHcC---
Confidence 2221 333 333333221 1233223 237899999999999875 4 68999999996
Q ss_pred CceEEEeCCCCch-------hhc--cCCeEEECCCC--HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHH
Q 003145 487 KGVLILSEFAGAA-------QSL--GAGAILVNPWN--ITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAE 553 (844)
Q Consensus 487 ~g~lVlSe~~G~~-------~~l--g~~g~lvnP~d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 553 (844)
.|+|++...|.. +.+ +.+|++++|.| +++++++|.++++. ++.++++.+++++++..+...++++
T Consensus 271 -~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 271 -VPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLD-PANLEAMAEAARKLAKPDAAKRIAE 346 (348)
T ss_pred -CCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcC-HHHHHHHHHHHHhcCCccHHHHHHh
Confidence 788888765532 344 45799998876 99999999999975 5567777778888777776666654
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.4e-09 Score=122.30 Aligned_cols=248 Identities=15% Similarity=0.142 Sum_probs=141.1
Q ss_pred CCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhh--cCCEEEEecHHHHHHHHHHHHHH
Q 003145 232 GDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFVSACTRI 309 (844)
Q Consensus 232 ~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll--~aDlIgf~t~~~~~~Fl~~~~~~ 309 (844)
+|+|++|......+...+-....++|+++..+-. -+.+.+. |+.+++.+-+. .+|++.-.+....+++.+
T Consensus 87 pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~~~~~--~~~~~~~r~~~~~~ad~~~~~s~~~~~~l~~----- 158 (365)
T TIGR00236 87 PDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTGDRYS--PMPEEINRQLTGHIADLHFAPTEQAKDNLLR----- 158 (365)
T ss_pred CCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcCCCCC--CCccHHHHHHHHHHHHhccCCCHHHHHHHHH-----
Confidence 4999999544444433333333468886543211 1111111 12222222211 145555555555555432
Q ss_pred hCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhC-CCcEEEE-Eecc-cccCCHHHHHHHHH
Q 003145 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA-GRKVMLG-VDRL-DMIKGIPQKLLAFE 386 (844)
Q Consensus 310 l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~-~~~vil~-VdRl-d~~KGi~~~l~Af~ 386 (844)
.| ....+|.++++|+....+...... ....++++++ ++.+++. ..|. ...||+..+++|+.
T Consensus 159 ~G-----------~~~~~I~vign~~~d~~~~~~~~~-----~~~~~~~~~~~~~~~vl~~~hr~~~~~k~~~~ll~a~~ 222 (365)
T TIGR00236 159 EN-----------VKADSIFVTGNTVIDALLTNVEIA-----YSSPVLSEFGEDKRYILLTLHRRENVGEPLENIFKAIR 222 (365)
T ss_pred cC-----------CCcccEEEeCChHHHHHHHHHhhc-----cchhHHHhcCCCCCEEEEecCchhhhhhHHHHHHHHHH
Confidence 12 224578999999633322221111 1123445553 3345555 4465 34599999999999
Q ss_pred HHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEc
Q 003145 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 466 (844)
Q Consensus 387 ~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~ 466 (844)
++.+++|+++ +++++.|. +. .+..+. ..++. . ..|+ +.+.++..++..+|+.||+++.+
T Consensus 223 ~l~~~~~~~~----~vi~~~~~----~~---~~~~~~---~~~~~----~--~~v~-~~~~~~~~~~~~~l~~ad~vv~~ 281 (365)
T TIGR00236 223 EIVEEFEDVQ----IVYPVHLN----PV---VREPLH---KHLGD----S--KRVH-LIEPLEYLDFLNLAANSHLILTD 281 (365)
T ss_pred HHHHHCCCCE----EEEECCCC----hH---HHHHHH---HHhCC----C--CCEE-EECCCChHHHHHHHHhCCEEEEC
Confidence 9988888653 55554332 11 112221 22211 1 1355 46788999999999999999988
Q ss_pred CCCcCCChhHhhhhhcccCCCceEEEe-CCCCchhhc-cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHH
Q 003145 467 SLRDGMNLVSYEFVACQDLKKGVLILS-EFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKR 535 (844)
Q Consensus 467 S~~EG~~Lv~~Eama~~~~~~g~lVlS-e~~G~~~~l-g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r 535 (844)
| |.+.+|||+|+ .|+|.+ ..+|..+.+ ...++++ |.|+++++++|.++++.+ +.+.++
T Consensus 282 S-----g~~~~EA~a~g----~PvI~~~~~~~~~e~~~~g~~~lv-~~d~~~i~~ai~~ll~~~-~~~~~~ 341 (365)
T TIGR00236 282 S-----GGVQEEAPSLG----KPVLVLRDTTERPETVEAGTNKLV-GTDKENITKAAKRLLTDP-DEYKKM 341 (365)
T ss_pred C-----hhHHHHHHHcC----CCEEECCCCCCChHHHhcCceEEe-CCCHHHHHHHHHHHHhCh-HHHHHh
Confidence 8 55689999996 677775 445544444 2245666 579999999999999854 344433
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.3e-09 Score=121.97 Aligned_cols=260 Identities=11% Similarity=0.076 Sum_probs=152.9
Q ss_pred CCCEEEEeCccchhHHHHHH-hcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLK-EYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr-~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~ 309 (844)
.+|+|.++ |...+-..++ ....++|+.. +++-+..... | + --.+|.+...+....+.+..
T Consensus 104 kPDvVi~~--~p~~~~~~l~~~~~~~iP~~~-v~td~~~~~~-----w---~---~~~~d~~~v~s~~~~~~l~~----- 164 (391)
T PRK13608 104 KPDLILLT--FPTPVMSVLTEQFNINIPVAT-VMTDYRLHKN-----W---I---TPYSTRYYVATKETKQDFID----- 164 (391)
T ss_pred CcCEEEEC--CcHHHHHHHHHhcCCCCCEEE-EeCCCCcccc-----c---c---cCCCCEEEECCHHHHHHHHH-----
Confidence 45898885 3332333343 3344677743 4554411100 1 1 12478777766554444322
Q ss_pred hCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCc-EEEEEecccccCCHHHHHHHH
Q 003145 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRK-VMLGVDRLDMIKGIPQKLLAF 385 (844)
Q Consensus 310 l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~-vil~VdRld~~KGi~~~l~Af 385 (844)
.|. ...+|.++++.|+.. |.+.. + ...+++.+ ++++ ++++.||+...||+..+++++
T Consensus 165 ~gi-----------~~~ki~v~GiPv~~~-f~~~~---~----~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~ 225 (391)
T PRK13608 165 VGI-----------DPSTVKVTGIPIDNK-FETPI---D----QKQWLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDI 225 (391)
T ss_pred cCC-----------CHHHEEEECeecChH-hcccc---c----HHHHHHHcCCCCCCCEEEEECCCcccchhHHHHHHHH
Confidence 121 123566666666643 43211 1 12334444 2444 556799999999999999985
Q ss_pred HHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEE
Q 003145 386 EKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALV 465 (844)
Q Consensus 386 ~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~ 465 (844)
++..|+ +.++++++. .+ ++.+++.+.. +. . ..|+ +.|++ +++..+|+.||+++.
T Consensus 226 ---~~~~~~----~~~vvv~G~----~~---~l~~~l~~~~---~~----~--~~v~-~~G~~--~~~~~~~~~aDl~I~ 279 (391)
T PRK13608 226 ---LAKSAN----AQVVMICGK----SK---ELKRSLTAKF---KS----N--ENVL-ILGYT--KHMNEWMASSQLMIT 279 (391)
T ss_pred ---HhcCCC----ceEEEEcCC----CH---HHHHHHHHHh---cc----C--CCeE-EEecc--chHHHHHHhhhEEEe
Confidence 334454 346555431 12 1223333221 11 0 1354 35665 579999999999986
Q ss_pred cCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhh-----ccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 003145 466 TSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS-----LGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (844)
Q Consensus 466 ~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~-----lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~ 540 (844)
. +.|+++.|||||| .|+|++...+..+. +...|.-+-+.|.++++++|.++++++ +.+.++.++++
T Consensus 280 k----~gg~tl~EA~a~G----~PvI~~~~~pgqe~~N~~~~~~~G~g~~~~~~~~l~~~i~~ll~~~-~~~~~m~~~~~ 350 (391)
T PRK13608 280 K----PGGITISEGLARC----IPMIFLNPAPGQELENALYFEEKGFGKIADTPEEAIKIVASLTNGN-EQLTNMISTME 350 (391)
T ss_pred C----CchHHHHHHHHhC----CCEEECCCCCCcchhHHHHHHhCCcEEEeCCHHHHHHHHHHHhcCH-HHHHHHHHHHH
Confidence 3 4589999999996 78888754322221 112333333569999999999999864 56677777888
Q ss_pred HHHHhcCHHHHHHHHHHHHHHhH
Q 003145 541 THVTTHTAQEWAETFVSELNDTV 563 (844)
Q Consensus 541 ~~v~~~~~~~W~~~fl~~l~~~~ 563 (844)
+..+.+++...++.+++.+....
T Consensus 351 ~~~~~~s~~~i~~~l~~l~~~~~ 373 (391)
T PRK13608 351 QDKIKYATQTICRDLLDLIGHSS 373 (391)
T ss_pred HhcCCCCHHHHHHHHHHHhhhhh
Confidence 88888999988888887776544
|
|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.19 E-value=9.5e-09 Score=121.69 Aligned_cols=182 Identities=13% Similarity=0.109 Sum_probs=126.1
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHHH--hCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcc
Q 003145 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLE--ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439 (844)
Q Consensus 362 ~~~vil~VdRld~~KGi~~~l~Af~~ll~--~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~ 439 (844)
+..+|.+|.|+...||...++.+++++++ ++|+ ..+++|+.|.+...+.. -+++.+.+.+++.. -.|. +
T Consensus 388 d~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~--~pvq~V~~Gka~p~d~~-gk~~i~~i~~la~~--~~~~--~-- 458 (601)
T TIGR02094 388 DVLTIGFARRFATYKRADLIFRDLERLARILNNPE--RPVQIVFAGKAHPADGE-GKEIIQRIVEFSKR--PEFR--G-- 458 (601)
T ss_pred CCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCcccch-HHHHHHHHHHHHhc--ccCC--C--
Confidence 45688899999999999999999999985 5554 24778888765444322 23455566665543 0021 1
Q ss_pred cEEEeCCCCCHHHHHHHHHhCcEEEE-cCC-CcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECC----
Q 003145 440 PIHHLDRSLDFPALCALYAVTDVALV-TSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP---- 511 (844)
Q Consensus 440 pv~~~~~~v~~~el~aly~~ADv~v~-~S~-~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP---- 511 (844)
.|.|+. ..+-+--..+|..||++++ ||. .|..|+.-+=||.- |.|-+|-.-|...+. +.+|+.+.+
T Consensus 459 kv~f~~-~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n-----GgL~~sv~DG~~~E~~~~~nGf~f~~~~~~ 532 (601)
T TIGR02094 459 RIVFLE-NYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN-----GVLNLSILDGWWGEGYDGDNGWAIGDGEEY 532 (601)
T ss_pred CEEEEc-CCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc-----CCceeecccCcccccCCCCcEEEECCCccc
Confidence 366544 4455555678999999999 888 99999999999986 778888888776654 568999985
Q ss_pred --------CCHHHHHHHHHHHh-c----CCH----HHHHHHHHHHHHH-HHhcCHHHHHHHHHHH
Q 003145 512 --------WNITEVANAIARAL-N----MSP----EEREKRHWHNFTH-VTTHTAQEWAETFVSE 558 (844)
Q Consensus 512 --------~d~~~~A~ai~~aL-~----m~~----~er~~r~~~~~~~-v~~~~~~~W~~~fl~~ 558 (844)
.|.+++-++|.+++ . .+. .+-.++++++... ...++|.+=++.+.+.
T Consensus 533 ~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~ 597 (601)
T TIGR02094 533 DDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDK 597 (601)
T ss_pred cccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHH
Confidence 89999999998877 2 111 1223333333222 2358888888877654
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.15 E-value=4.3e-09 Score=117.88 Aligned_cols=242 Identities=14% Similarity=0.066 Sum_probs=138.8
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCcc--HHHHHhhhcCCEEEEecHHHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR--SDLLRAVLAADLVGFHTYDYARHFVSACTR 308 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r--~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~ 308 (844)
..|+|++|++....++..+..+..++|+++..|.-.. .+ +..|+. +..+. -.+|.+...+....+++.+
T Consensus 88 ~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s-~~--~~~~~~~~r~~~~--~~ad~~~~~s~~~~~~l~~---- 158 (363)
T cd03786 88 KPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRS-FD--RGMPDEENRHAID--KLSDLHFAPTEEARRNLLQ---- 158 (363)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHcCCCEEEEeccccc-CC--CCCCchHHHHHHH--HHhhhccCCCHHHHHHHHH----
Confidence 4699999987766665555544457888865542110 00 011111 11111 1245444334333333221
Q ss_pred HhCcccCCCceeeCCeEEEEEEEeccc-ChhHHhhhhcCCchHHHHHHHHHHh--C-CCcEEEEEecccc---cCCHHHH
Q 003145 309 ILGFEGTPEGVEDQGRLTRVAAFPIGI-DSERFIRALEINPVQVHIKELQETF--A-GRKVMLGVDRLDM---IKGIPQK 381 (844)
Q Consensus 309 ~l~~~~~~~~v~~~g~~~~v~v~P~GI-D~~~f~~~~~~~~~~~~~~~lr~~~--~-~~~vil~VdRld~---~KGi~~~ 381 (844)
.+....+|.++++++ |...+.+..... ...++.+ . ++.+++.++|+.. .||+..+
T Consensus 159 ------------~G~~~~kI~vign~v~d~~~~~~~~~~~------~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~~l 220 (363)
T cd03786 159 ------------EGEPPERIFVVGNTMIDALLRLLELAKK------ELILELLGLLPKKYILVTLHRVENVDDGEQLEEI 220 (363)
T ss_pred ------------cCCCcccEEEECchHHHHHHHHHHhhcc------chhhhhcccCCCCEEEEEeCCccccCChHHHHHH
Confidence 122345788888875 654443221110 0112222 2 3457778999875 7999999
Q ss_pred HHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCc
Q 003145 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (844)
Q Consensus 382 l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~AD 461 (844)
++|++.+.+. ++.++..+. .+....+++ .+.+.+.. ...|. +.+....+++..+|+.||
T Consensus 221 ~~al~~l~~~------~~~vi~~~~-----~~~~~~l~~----~~~~~~~~-----~~~v~-~~~~~~~~~~~~l~~~ad 279 (363)
T cd03786 221 LEALAELAEE------DVPVVFPNH-----PRTRPRIRE----AGLEFLGH-----HPNVL-LISPLGYLYFLLLLKNAD 279 (363)
T ss_pred HHHHHHHHhc------CCEEEEECC-----CChHHHHHH----HHHhhccC-----CCCEE-EECCcCHHHHHHHHHcCc
Confidence 9999987432 233443322 222233333 33332210 01355 466677899999999999
Q ss_pred EEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhccCCeEEECCC-CHHHHHHHHHHHhcCCH
Q 003145 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW-NITEVANAIARALNMSP 529 (844)
Q Consensus 462 v~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~lg~~g~lvnP~-d~~~~A~ai~~aL~m~~ 529 (844)
++|.+|- | +..|||+|+ .|+|++...+....+..+|..+.+. |.++++++|.++++++.
T Consensus 280 ~~v~~Sg----g-i~~Ea~~~g----~PvI~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~i~~ll~~~~ 339 (363)
T cd03786 280 LVLTDSG----G-IQEEASFLG----VPVLNLRDRTERPETVESGTNVLVGTDPEAILAAIEKLLSDEF 339 (363)
T ss_pred EEEEcCc----c-HHhhhhhcC----CCEEeeCCCCccchhhheeeEEecCCCHHHHHHHHHHHhcCch
Confidence 9999994 4 479999996 7888886655444443566555443 79999999999998753
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.12 E-value=9.2e-10 Score=109.88 Aligned_cols=200 Identities=18% Similarity=0.206 Sum_probs=119.3
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc---CceEEe
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY---NLWLAA 666 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l---~l~lia 666 (844)
..+|||+|+||||++...+| +.....|.+|.. .|..|+.+|..+...+..+-+.+ ++.+||
T Consensus 6 ~~~lIFtDlD~TLl~~~ye~---------------~pA~pv~~el~d-~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~ia 69 (274)
T COG3769 6 MPLLIFTDLDGTLLPHSYEW---------------QPAAPVLLELKD-AGVPVILCSSKTRAEMLYLQKSLGVQGLPLIA 69 (274)
T ss_pred cceEEEEcccCcccCCCCCC---------------CccchHHHHHHH-cCCeEEEeccchHHHHHHHHHhcCCCCCceee
Confidence 46899999999999965433 234556677765 69999999999999998888877 468999
Q ss_pred ecceEEEecCCeeeecc--c------ccCCh-HHHHHHHHHHHHHHhcCCCceEe----------------------ecc
Q 003145 667 ENGMFLRCTTGKWMTTM--P------EHLNM-EWVDSLKHVFEYFTERTPRSHFE----------------------QRE 715 (844)
Q Consensus 667 enG~~i~~~~~~w~~~~--~------~~~~~-~w~~~v~~i~~~~~~rt~gs~iE----------------------~k~ 715 (844)
|||+.|..+ +.|...- + ..... .-.+.+.+.++...+...-.++. .++
T Consensus 70 EnG~aI~~p-~~~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rE 148 (274)
T COG3769 70 ENGAAIYLP-KGWFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLRE 148 (274)
T ss_pred cCCceEEec-ccccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHH
Confidence 999999842 2232110 0 00000 01123333332221110000000 011
Q ss_pred ceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEE
Q 003145 716 TSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLC 795 (844)
Q Consensus 716 ~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vla 795 (844)
.+.+.-.+..| ++..++ ...+...+++++.|....-|....-.||.|++.+++.+.. .....-++.
T Consensus 149 yseti~~rs~d---------~~~~~~-~~~L~e~glt~v~garf~~v~~as~gKg~Aa~~ll~~y~r----l~~~r~t~~ 214 (274)
T COG3769 149 YSETIIWRSSD---------ERMAQF-TARLNERGLTFVHGARFWHVLDASAGKGQAANWLLETYRR----LGGARTTLG 214 (274)
T ss_pred hhhheeecccc---------hHHHHH-HHHHHhcCceEEeccceEEEeccccCccHHHHHHHHHHHh----cCceeEEEe
Confidence 12111112111 111111 2222234688999988888888788899999999997642 022345899
Q ss_pred EeeCCCch--hhc--cCcEEEeCCCCcchh
Q 003145 796 IGHFLGKV--LLT--QFLIQVGSSINSLSK 821 (844)
Q Consensus 796 iGD~~~nD--Mf~--g~~Iavgna~~~~a~ 821 (844)
+|| +.|| ||+ .+.+.|++-..+-++
T Consensus 215 ~GD-g~nD~Pl~ev~d~AfiV~~lnre~~~ 243 (274)
T COG3769 215 LGD-GPNDAPLLEVMDYAFIVKGLNREGVH 243 (274)
T ss_pred cCC-CCCcccHHHhhhhheeecccchhhhh
Confidence 999 9999 999 788888865444333
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.6e-08 Score=118.18 Aligned_cols=274 Identities=12% Similarity=0.088 Sum_probs=170.3
Q ss_pred HHHHHHHHHHHHHhh----CCCCCEEE--EeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCc--cHHHHHhh
Q 003145 214 YIKANQMFADVVNKH----YKDGDVVW--CHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPS--RSDLLRAV 285 (844)
Q Consensus 214 Y~~vN~~fa~~i~~~----~~~~DiVw--vHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~--r~~ll~~l 285 (844)
|...+..++..+.+. ..++|++. ++.-|... +....|.-++.+..|+ =+ . |. -...+..+
T Consensus 203 f~~~~eLi~efl~~l~~~~~~~~d~~Iva~Dr~~~~~----~~~~~~~~~~~ls~f~-~~--~-----~~~~y~~~l~~~ 270 (519)
T TIGR03713 203 YSNMDELIREKFQRYLKVEVKDDDEIIVASDDRHNFL----VADTFPAKNLIFSLFS-ER--N-----RHHTYLDLYESL 270 (519)
T ss_pred ECCHHHHHHHHHHHHHHhhCCCCCEEEEEcCchhhhh----HhhcCccceEEEEecc-Cc--c-----cccchhhhhhCh
Confidence 333444444443333 56789888 67777666 3333333334446665 11 1 21 24566677
Q ss_pred hcCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcE
Q 003145 286 LAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKV 365 (844)
Q Consensus 286 l~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~v 365 (844)
-.+|.|...|..-.+..... ++. .. ...+|..+|++.- . ... . ..++..++.|
T Consensus 271 ~~~d~iIv~T~~q~~~l~~~----~~~--------~~-~~~~v~~Ip~~~~-~-~~~--~----------~s~r~~~~~I 323 (519)
T TIGR03713 271 SRADLIIVDREDIERLLEEN----YRE--------NY-VEFDISRITPFDT-R-LRL--G----------QSQQLYETEI 323 (519)
T ss_pred hhcCeEEEcCHHHHHHHHHH----hhh--------cc-cCCcceeeCccce-E-Eec--C----------hhhcccceEE
Confidence 77887776665433322211 110 00 1234556676543 1 111 0 1122235556
Q ss_pred EEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCC--------
Q 003145 366 MLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT-------- 437 (844)
Q Consensus 366 il~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~-------- 437 (844)
.+++||| +.|-+..+|+|+.++++++|+.. |.+.|.+. .. ++.+.+++++.++|..++...
T Consensus 324 ~v~idrL-~ek~~~~~I~av~~~~~~~p~~~----L~~~gy~~---~~---~~~~~l~~~i~~~~~~~~~~~~~~~~~~~ 392 (519)
T TIGR03713 324 GFWIDGL-SDEELQQILQQLLQYILKNPDYE----LKILTYNN---DN---DITQLLEDILEQINEEYNQDKNFFSLSEQ 392 (519)
T ss_pred EEEcCCC-ChHHHHHHHHHHHHHHhhCCCeE----EEEEEecC---ch---hHHHHHHHHHHHHHhhhchhhhccccchh
Confidence 6667799 99999999999999999999854 66666432 11 234556666666665432100
Q ss_pred --------------cccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc-
Q 003145 438 --------------AVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL- 502 (844)
Q Consensus 438 --------------~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l- 502 (844)
-...+.|.|..+..++...|..|.++|.+|..|||+ ..+||++.| .|.| .-|.++.+
T Consensus 393 ~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~G----iPqI---nyg~~~~V~ 464 (519)
T TIGR03713 393 DENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAG----IPQI---NKVETDYVE 464 (519)
T ss_pred hhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcC----CCee---ecCCceeeE
Confidence 002344688888889999999999999999999999 999999984 4455 66777777
Q ss_pred -cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCH
Q 003145 503 -GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTA 548 (844)
Q Consensus 503 -g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~ 548 (844)
|.+|++| .|..++++||...|..+. ...+....+.+.+.+++.
T Consensus 465 d~~NG~li--~d~~~l~~al~~~L~~~~-~wn~~~~~sy~~~~~yS~ 508 (519)
T TIGR03713 465 HNKNGYII--DDISELLKALDYYLDNLK-NWNYSLAYSIKLIDDYSS 508 (519)
T ss_pred cCCCcEEe--CCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhhH
Confidence 7899999 699999999999998653 444444555555555543
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.8e-08 Score=110.52 Aligned_cols=241 Identities=14% Similarity=0.025 Sum_probs=143.7
Q ss_pred HHhhCCCCCEEEEeCccchh--HHH-HHHh-cCCCCeEEEEEecCCCChhhhhcCC-ccHHHHHhhhcCCEEEEecHHHH
Q 003145 225 VNKHYKDGDVVWCHDYHLMF--LPK-CLKE-YNSDMKVGWFLHTPFPSSEIHRTLP-SRSDLLRAVLAADLVGFHTYDYA 299 (844)
Q Consensus 225 i~~~~~~~DiVwvHDyhl~l--lp~-~lr~-~~~~~~i~~flH~Pfp~~e~~r~lp-~r~~ll~~ll~aDlIgf~t~~~~ 299 (844)
+...+++||+|++|..-+.. ++. ++++ +..++|+++++|--+|-. +.... ........+-.||.|..++....
T Consensus 58 ~~~~~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~--~~~~~~~~~~~~~~~~~aD~iI~~S~~~~ 135 (333)
T PRK09814 58 ILASLKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLR--FDSNYYLMKEEIDMLNLADVLIVHSKKMK 135 (333)
T ss_pred HHhcCCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHh--ccccchhhHHHHHHHHhCCEEEECCHHHH
Confidence 45567899999999854432 222 2222 112799999999877632 11111 12223334446899999887655
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHH
Q 003145 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIP 379 (844)
Q Consensus 300 ~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~ 379 (844)
+.+.+ .|.. ..++.++|+..++..... +....+++.|+++||+....++.
T Consensus 136 ~~l~~-----~g~~-----------~~~i~~~~~~~~~~~~~~--------------~~~~~~~~~i~yaG~l~k~~~l~ 185 (333)
T PRK09814 136 DRLVE-----EGLT-----------TDKIIVQGIFDYLNDIEL--------------VKTPSFQKKINFAGNLEKSPFLK 185 (333)
T ss_pred HHHHH-----cCCC-----------cCceEecccccccccccc--------------cccccCCceEEEecChhhchHHH
Confidence 55432 1211 123444444332211100 01113466899999999433211
Q ss_pred HHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHh
Q 003145 380 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 459 (844)
Q Consensus 380 ~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ 459 (844)
...|+ +.|+++|.+ ++.. .. ...|.| .|.++.+++..+|+.
T Consensus 186 ----------~~~~~----~~l~i~G~g-----~~~~-----------~~--------~~~V~f-~G~~~~eel~~~l~~ 226 (333)
T PRK09814 186 ----------NWSQG----IKLTVFGPN-----PEDL-----------EN--------SANISY-KGWFDPEELPNELSK 226 (333)
T ss_pred ----------hcCCC----CeEEEECCC-----cccc-----------cc--------CCCeEE-ecCCCHHHHHHHHhc
Confidence 12343 457777642 2110 00 013664 899999999999998
Q ss_pred CcEEEEcCCC-----------cCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhc
Q 003145 460 TDVALVTSLR-----------DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN 526 (844)
Q Consensus 460 ADv~v~~S~~-----------EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~ 526 (844)
|+.+++.-. -.++--..|||||| .|+|++..++.++.+ +..|++|+ +.++++++|..+
T Consensus 227 -~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G----~PVI~~~~~~~~~~V~~~~~G~~v~--~~~el~~~l~~~-- 297 (333)
T PRK09814 227 -GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAG----LPVIVWSKAAIADFIVENGLGFVVD--SLEELPEIIDNI-- 297 (333)
T ss_pred -CcCeEEcCCCCCccchhhhhccchHHHHHHHHCC----CCEEECCCccHHHHHHhCCceEEeC--CHHHHHHHHHhc--
Confidence 766654321 23444588899996 899999999989888 56799997 678899998874
Q ss_pred CCHHHHHHHHHHHHHHHHhc
Q 003145 527 MSPEEREKRHWHNFTHVTTH 546 (844)
Q Consensus 527 m~~~er~~r~~~~~~~v~~~ 546 (844)
+++++.++.++.++..+..
T Consensus 298 -~~~~~~~m~~n~~~~~~~~ 316 (333)
T PRK09814 298 -TEEEYQEMVENVKKISKLL 316 (333)
T ss_pred -CHHHHHHHHHHHHHHHHHH
Confidence 4566766666666665443
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.03 E-value=9.9e-10 Score=104.93 Aligned_cols=129 Identities=25% Similarity=0.316 Sum_probs=89.2
Q ss_pred CcEEEEEecccccCCHHHHHH-HHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 003145 363 RKVMLGVDRLDMIKGIPQKLL-AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (844)
Q Consensus 363 ~~vil~VdRld~~KGi~~~l~-Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv 441 (844)
..+|++.|++.+.||+..+++ |++++.+++|+ +.|.++|.. ++ +++++ +. ..|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~----~~l~i~G~~-----~~------~l~~~----~~-------~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPD----IELIIIGNG-----PD------ELKRL----RR-------PNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTT----EEEEEECES-----S-------HHCCH----HH-------CTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcC----EEEEEEeCC-----HH------HHHHh----cC-------CCE
Confidence 357889999999999999999 99999999986 558877652 22 12222 10 136
Q ss_pred EEeCCCCCHHHHHHHHHhCcEEEEcCC-CcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHH
Q 003145 442 HHLDRSLDFPALCALYAVTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA 518 (844)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~v~~S~-~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A 518 (844)
.+ .+.+ +++.++|+.||+++.|+. .++++..++|||++| .|+|+|.. |..+.+ ...++++ +.|+++++
T Consensus 56 ~~-~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G----~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~ 126 (135)
T PF13692_consen 56 RF-HGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAG----KPVIASDN-GAEGIVEEDGCGVLV-ANDPEELA 126 (135)
T ss_dssp EE-E-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT------EEEEHH-HCHCHS---SEEEE--TT-HHHHH
T ss_pred EE-cCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhC----CCEEECCc-chhhheeecCCeEEE-CCCHHHHH
Confidence 65 6777 689999999999999985 789999999999996 78888887 555554 2356666 88999999
Q ss_pred HHHHHHhc
Q 003145 519 NAIARALN 526 (844)
Q Consensus 519 ~ai~~aL~ 526 (844)
++|.++++
T Consensus 127 ~~i~~l~~ 134 (135)
T PF13692_consen 127 EAIERLLN 134 (135)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99999986
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.99 E-value=4.9e-08 Score=110.22 Aligned_cols=150 Identities=19% Similarity=0.183 Sum_probs=96.8
Q ss_pred HHHHhC---CCcEE-EEEe-cccccCC-HHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHh
Q 003145 356 LQETFA---GRKVM-LGVD-RLDMIKG-IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI 429 (844)
Q Consensus 356 lr~~~~---~~~vi-l~Vd-Rld~~KG-i~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~I 429 (844)
+++.++ ++++| +..| |....|+ +..+++|++.+.+++|++ .+++++. +++.. +++++++.+.
T Consensus 176 ~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~----~~ii~~~----~~~~~----~~~~~~~~~~ 243 (380)
T PRK00025 176 ARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDL----RFVLPLV----NPKRR----EQIEEALAEY 243 (380)
T ss_pred HHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCe----EEEEecC----ChhhH----HHHHHHHhhc
Confidence 445553 45544 3334 7766544 788999999998887764 4666643 12222 2333333321
Q ss_pred hcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEe----------------
Q 003145 430 NGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS---------------- 493 (844)
Q Consensus 430 N~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlS---------------- 493 (844)
. | . .+.++. .++..+|+.||+++.+| |.+.+|+|+|+ .|+|++
T Consensus 244 ~---~---~-~v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G----~PvI~~~~~~~~~~~~~~~~~~ 302 (380)
T PRK00025 244 A---G---L-EVTLLD-----GQKREAMAAADAALAAS-----GTVTLELALLK----VPMVVGYKVSPLTFWIAKRLVK 302 (380)
T ss_pred C---C---C-CeEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHhC----CCEEEEEccCHHHHHHHHHHHc
Confidence 0 1 1 244333 47899999999999998 78889999996 788877
Q ss_pred -CCCCchhhccC----CeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 003145 494 -EFAGAAQSLGA----GAILVNPWNITEVANAIARALNMSPEEREKRHWHN 539 (844)
Q Consensus 494 -e~~G~~~~lg~----~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~ 539 (844)
.+.|.++.+.. .+++.++.|++++++++.++|+++ +.+.++.+++
T Consensus 303 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~-~~~~~~~~~~ 352 (380)
T PRK00025 303 VPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADG-ARRQALLEGF 352 (380)
T ss_pred CCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCH-HHHHHHHHHH
Confidence 44455565521 346778889999999999999865 3555544443
|
|
| >KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.7e-08 Score=99.28 Aligned_cols=202 Identities=18% Similarity=0.254 Sum_probs=130.9
Q ss_pred HHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc--C--
Q 003145 586 YLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--N-- 661 (844)
Q Consensus 586 y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l--~-- 661 (844)
+++-..-|+.||.||||++. ..+++|++.+.|++|.+ ...+.++-|.+++-+.+.++.- +
T Consensus 6 ~~r~~~~l~lfdvdgtLt~~--------------r~~~~~e~~~~l~~lr~--~v~ig~VggsDl~k~~eqlG~~Vl~~f 69 (252)
T KOG3189|consen 6 AARDEETLCLFDVDGTLTPP--------------RQKVTPEMLEFLQKLRK--KVTIGFVGGSDLSKQQEQLGDNVLEEF 69 (252)
T ss_pred hhcCCceEEEEecCCccccc--------------cccCCHHHHHHHHHHhh--heEEEEeecHHHHHHHHHhchhHHhhh
Confidence 44455669999999999987 46789999999999875 7999999999988888777542 2
Q ss_pred ceEEeecceEEEecCCee--eecccccC-ChHHHHHHHHHHHHHHhc----CCCceEeeccceEEEEe--ecCChh----
Q 003145 662 LWLAAENGMFLRCTTGKW--MTTMPEHL-NMEWVDSLKHVFEYFTER----TPRSHFEQRETSLVWNY--KYADVE---- 728 (844)
Q Consensus 662 l~liaenG~~i~~~~~~w--~~~~~~~~-~~~w~~~v~~i~~~~~~r----t~gs~iE~k~~sl~~hy--~~~d~e---- 728 (844)
.+..+|||..-...++.. +.+. ..+ +...++.+.-.+.|..+- -.|.+||-+...+.+.- |++..|
T Consensus 70 DY~F~ENGl~~yk~gk~~~~Qsi~-~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~e 148 (252)
T KOG3189|consen 70 DYVFSENGLVAYKGGKLLSKQSII-NHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERNE 148 (252)
T ss_pred cccccCCCeeEeeCCcchhHHHHH-HHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHHH
Confidence 378899999876544321 1111 001 111122222233333322 34889998877765543 444321
Q ss_pred hhH-----HHHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEee---C
Q 003145 729 FGR-----IQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH---F 799 (844)
Q Consensus 729 ~~~-----~qa~el~~~L~~~~~~~~~~~v~~-g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD---~ 799 (844)
|.. ..-..+.+.| .+-+.+.+++..- |.-+++|-|.||+|-.++++|-+. + .+.+.+||| .
T Consensus 149 F~e~Dkk~~iR~K~v~~L-r~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d-g--------f~~IhFFGDkT~~ 218 (252)
T KOG3189|consen 149 FEELDKKHKIREKFVEAL-REEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD-G--------FDTIHFFGDKTMP 218 (252)
T ss_pred HHHhhhhhhhHHHHHHHH-HHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc-C--------CceEEEeccccCC
Confidence 221 1123455566 3334566777654 567999999999999999988654 3 789999999 2
Q ss_pred CCch--hhc---cCcEEEeC
Q 003145 800 LGKV--LLT---QFLIQVGS 814 (844)
Q Consensus 800 ~~nD--Mf~---g~~Iavgn 814 (844)
+.|| .|. -.|..|.+
T Consensus 219 GGNDyEIf~dprtiGhsV~~ 238 (252)
T KOG3189|consen 219 GGNDYEIFADPRTIGHSVTS 238 (252)
T ss_pred CCCcceeeeCCccccccccC
Confidence 6688 665 34444444
|
|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.8e-07 Score=107.59 Aligned_cols=322 Identities=17% Similarity=0.195 Sum_probs=161.2
Q ss_pred HHHHHHHHhhCCCCC--EEEEeCccchhHHHHHHhcCCCCeEEEEEecCCC-------ChhhhhcCCc--cHHH------
Q 003145 219 QMFADVVNKHYKDGD--VVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFP-------SSEIHRTLPS--RSDL------ 281 (844)
Q Consensus 219 ~~fa~~i~~~~~~~D--iVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp-------~~e~~r~lp~--r~~l------ 281 (844)
..|.+.+.+...... +.+.|.|..-+-.-++|++.|++.-+|+.|---+ ..+++..|+. ..+.
T Consensus 129 a~fi~~f~~~~~~~~~ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i 208 (633)
T PF05693_consen 129 AWFIEEFYKFYEEKPKVIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNI 208 (633)
T ss_dssp HHHHHHHHHH-S-SEEEEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-
T ss_pred HHHHHHHHHhhcCCCcEEEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccc
Confidence 444444444444233 3366888777777788999999999999996422 1123333331 0111
Q ss_pred ------HHh-hhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhc----CCchH
Q 003145 282 ------LRA-VLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALE----INPVQ 350 (844)
Q Consensus 282 ------l~~-ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~----~~~~~ 350 (844)
.+. -..||....-+.--+ .-|..+|+ |.. =.|.|||+|.+.|...-. ....+
T Consensus 209 ~~k~~iEraaA~~AdvFTTVSeITa----~Ea~~LL~------------r~p-DvV~pNGl~v~~~~~~~efqnl~~~~k 271 (633)
T PF05693_consen 209 YHKHSIERAAAHYADVFTTVSEITA----KEAEHLLK------------RKP-DVVTPNGLNVDKFPALHEFQNLHAKAK 271 (633)
T ss_dssp HHHHHHHHHHHHHSSEEEESSHHHH----HHHHHHHS------------S---SEE----B-GGGTSSTTHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcCeeeehhhhHH----HHHHHHhC------------CCC-CEEcCCCccccccccchHHHHHHHHHH
Confidence 111 112333222221110 01222332 221 136699999887654311 01122
Q ss_pred HHHHHH-HHHh-C------CCcEEEE-Eeccc-ccCCHHHHHHHHHHHHH---hCcCCCCceEEEEEEcCCCCCh---H-
Q 003145 351 VHIKEL-QETF-A------GRKVMLG-VDRLD-MIKGIPQKLLAFEKFLE---ENSDWRGKVVLLQIAVPTRTDV---P- 413 (844)
Q Consensus 351 ~~~~~l-r~~~-~------~~~vil~-VdRld-~~KGi~~~l~Af~~ll~---~~P~~~~~v~Lv~i~~p~r~~~---~- 413 (844)
+.+.++ +..+ + ++.++++ .||.+ ..||++..|+|+.+|-. .... ...|+.+ |..|+.... +
T Consensus 272 ~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~-~~tVVaF-ii~pa~~~~~~ve~ 349 (633)
T PF05693_consen 272 EKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGS-DKTVVAF-IIVPAKTNSFNVES 349 (633)
T ss_dssp HHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT--S-EEEEE-EE---SEEEE-HHH
T ss_pred HHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCC-CCeEEEE-EEecCccCCcCHHH
Confidence 334433 2222 1 3455555 88998 67999999999998743 2111 1123333 334654432 1
Q ss_pred -----HHHHHHHHHHHHHHHhhcc-c-----C------------------------------------------------
Q 003145 414 -----EYQRLTSQVHEIVGRINGR-F-----G------------------------------------------------ 434 (844)
Q Consensus 414 -----~~~~l~~~l~~lv~~IN~~-~-----g------------------------------------------------ 434 (844)
-+.+|++.++++.++|..+ | |
T Consensus 350 l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~ 429 (633)
T PF05693_consen 350 LKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNM 429 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHH
Confidence 0223333333222222110 0 0
Q ss_pred ---------CCCcccEEEeCCCCCH------HHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCch
Q 003145 435 ---------TLTAVPIHHLDRSLDF------PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA 499 (844)
Q Consensus 435 ---------~~~~~pv~~~~~~v~~------~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~ 499 (844)
..+...|+|....++. -++..+.+.+|+.|+||.+|.+|.+++|+.|.+ .|-|.|..+|..
T Consensus 430 irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~g----VPsITTnLsGFG 505 (633)
T PF05693_consen 430 IRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFG----VPSITTNLSGFG 505 (633)
T ss_dssp HHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT------EEEETTBHHH
T ss_pred HHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcC----CceeeccchhHH
Confidence 0122445654444432 367789999999999999999999999999995 789999999988
Q ss_pred hhc-------cCCeEEE-CC--CC----HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhH
Q 003145 500 QSL-------GAGAILV-NP--WN----ITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTV 563 (844)
Q Consensus 500 ~~l-------g~~g~lv-nP--~d----~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~ 563 (844)
..+ ...|+.| += .+ ++++|+.|.+...++..+|.....+..+.....+|......+.+....+.
T Consensus 506 ~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~AL 583 (633)
T PF05693_consen 506 CWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAYDLAL 583 (633)
T ss_dssp HHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHHHH
T ss_pred HHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 655 1346655 22 23 45666777777788887777766666565677788887777766655543
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=98.88 E-value=3.2e-07 Score=110.84 Aligned_cols=182 Identities=16% Similarity=0.121 Sum_probs=121.6
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHH--hCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 003145 364 KVMLGVDRLDMIKGIPQKLLAFEKFLE--ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (844)
Q Consensus 364 ~vil~VdRld~~KGi~~~l~Af~~ll~--~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv 441 (844)
.+|.++.|+...|+...++..+++|.+ .+|+ ..+++|..|.+...+.+ -+++.+.+.+++.. -+|. + .|
T Consensus 479 ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~~-gK~iIk~i~~~a~~--p~~~--~--kV 549 (778)
T cd04299 479 LTIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADEP-GKELIQEIVEFSRR--PEFR--G--RI 549 (778)
T ss_pred cEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccchH-HHHHHHHHHHHHhC--cCCC--C--cE
Confidence 378889999999999999999999865 3444 24888888765444322 23455555555431 0221 1 46
Q ss_pred EEeCCCCCHHHHHHHHHhCcEEEEcCC--CcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECC------
Q 003145 442 HHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP------ 511 (844)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP------ 511 (844)
.|+. ..+-+--..++..|||++.||. .|.-|+.-+=||.. |+|-+|..-|.-.+. |.+|+.+.+
T Consensus 550 vfle-~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~N-----G~LnlSvlDGww~E~~~g~nGwaig~~~~~~~ 623 (778)
T cd04299 550 VFLE-DYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALN-----GGLNLSVLDGWWDEGYDGENGWAIGDGDEYED 623 (778)
T ss_pred EEEc-CCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHc-----CCeeeecccCccccccCCCCceEeCCCccccC
Confidence 6654 4455555678999999999999 99999999999885 889999998887766 678999988
Q ss_pred ------CCHHHHHHHHHHHhc----CC-----HHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHH
Q 003145 512 ------WNITEVANAIARALN----MS-----PEEREKRHWHNFTH-VTTHTAQEWAETFVSELN 560 (844)
Q Consensus 512 ------~d~~~~A~ai~~aL~----m~-----~~er~~r~~~~~~~-v~~~~~~~W~~~fl~~l~ 560 (844)
.|.+++-+.|.+.+- .. +.+-.+++++.... .-.|++.+=++.|++.+-
T Consensus 624 ~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 624 DEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred hhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 455555566644332 10 11233333333222 345777777777766654
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5 | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.4e-08 Score=100.55 Aligned_cols=190 Identities=16% Similarity=0.228 Sum_probs=114.8
Q ss_pred HHHHHHHhhcCCCCcEEEEcCCChhhHHHhhc-c-c---CceEEeecceEEEecC-CeeeecccccCChH-HHHHHHHHH
Q 003145 627 LKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ-E-Y---NLWLAAENGMFLRCTT-GKWMTTMPEHLNME-WVDSLKHVF 699 (844)
Q Consensus 627 ~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~-~-l---~l~liaenG~~i~~~~-~~w~~~~~~~~~~~-w~~~v~~i~ 699 (844)
|.+.|.+|.+ +..|.|+||-++.-+++.+. . + -.++.++||..++..+ ..|.+.+.+.+..+ -++.+..++
T Consensus 1 M~~~L~~L~~--~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l 78 (220)
T PF03332_consen 1 MAELLQKLRK--KVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCL 78 (220)
T ss_dssp HHHHHHHHHT--TSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHh--cCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHH
Confidence 5688999986 79999999999999988884 3 2 2479999999776534 44654432222212 122333333
Q ss_pred HHHHh----cCCCceEeeccceEEEEe--ecCChh----hhHH----H-HHHHHHHHhcCCCCCCCeEEEE-cCcEEEEE
Q 003145 700 EYFTE----RTPRSHFEQRETSLVWNY--KYADVE----FGRI----Q-ARDMLQHLWTGPISNASVEVVQ-GSKSVEVR 763 (844)
Q Consensus 700 ~~~~~----rt~gs~iE~k~~sl~~hy--~~~d~e----~~~~----q-a~el~~~L~~~~~~~~~~~v~~-g~~~vEV~ 763 (844)
.+..+ ...|.+||.+...+.+.- ++|..+ |..+ . -+.+.+.| ...+.+.++++.. |.-+++|.
T Consensus 79 ~~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L-~~~f~d~~L~~siGGqiSiDvf 157 (220)
T PF03332_consen 79 RYISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEAL-KKEFPDFGLTFSIGGQISIDVF 157 (220)
T ss_dssp HHHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHH-HHHTCCCSEEEEEETTTEEEEE
T ss_pred HHHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHH-HHHCCCCceEEecCCceEEccc
Confidence 33322 135899999999999875 444321 2110 0 12455555 4334566788765 67899999
Q ss_pred eCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeC---CCch--hhccCcEEEeCCCCcchhhhcCCHHHHHHHHHHH
Q 003145 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF---LGKV--LLTQFLIQVGSSINSLSKEKKRKVHQLFGIFLRF 837 (844)
Q Consensus 764 p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~---~~nD--Mf~g~~Iavgna~~~~a~~~l~~~~~v~~~l~~~ 837 (844)
|+|++|..++++|.+. ..+.+++|||. +.|| +|..- -...+.+.+|++-...|+.|
T Consensus 158 p~GwDKty~Lr~l~~~---------~~~~I~FfGDkt~pGGNDyei~~~~---------rt~g~~V~~p~DT~~~l~~l 218 (220)
T PF03332_consen 158 PKGWDKTYCLRHLEDE---------GFDEIHFFGDKTFPGGNDYEIFEDP---------RTIGHTVTSPEDTIKQLKEL 218 (220)
T ss_dssp ETT-SGGGGGGGTTTT---------T-SEEEEEESS-STTSTTHHHHHST---------TSEEEE-SSHHHHHHHHHHH
T ss_pred cCCccHHHHHHHHHhc---------ccceEEEEehhccCCCCCceeeecC---------CccEEEeCCHHHHHHHHHHH
Confidence 9999999999988543 26899999992 6788 66521 11234455666666666655
|
4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A. |
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=98.51 E-value=6.8e-07 Score=79.83 Aligned_cols=88 Identities=28% Similarity=0.341 Sum_probs=73.7
Q ss_pred EEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 003145 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHN 539 (844)
Q Consensus 462 v~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~ 539 (844)
|++.|+..+|++...+|+|||| +|+|.+...+..+.+ |..++.++ |+++++++|..+|+.| +++++..+++
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G----~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~~-~~~~~ia~~a 73 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACG----TPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLENP-EERRRIAKNA 73 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCC----CeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCCH-HHHHHHHHHH
Confidence 4678889999999999999995 566666666777777 55688887 9999999999999954 5888888999
Q ss_pred HHHHH-hcCHHHHHHHHH
Q 003145 540 FTHVT-THTAQEWAETFV 556 (844)
Q Consensus 540 ~~~v~-~~~~~~W~~~fl 556 (844)
+++|. .|++.+-++.||
T Consensus 74 ~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 74 RERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHHHHhCCHHHHHHHHH
Confidence 98885 899998888876
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.8e-05 Score=89.85 Aligned_cols=135 Identities=16% Similarity=0.115 Sum_probs=84.0
Q ss_pred CCcEEEE--Eecccc-cCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCc
Q 003145 362 GRKVMLG--VDRLDM-IKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTA 438 (844)
Q Consensus 362 ~~~vil~--VdRld~-~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~ 438 (844)
++++|+. .+|..+ .|+++.+++|++.+.+.+|+++ +++.+.+. ... ..++++....+ . +
T Consensus 190 ~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~~----~~~----~~~~~~~~~~~----~-~- 251 (385)
T TIGR00215 190 NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVNF----KRR----LQFEQIKAEYG----P-D- 251 (385)
T ss_pred CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCCc----hhH----HHHHHHHHHhC----C-C-
Confidence 5566544 359887 7999999999999988888754 54433221 111 12222222221 1 1
Q ss_pred ccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeC-----------------CCCchhh
Q 003145 439 VPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-----------------FAGAAQS 501 (844)
Q Consensus 439 ~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe-----------------~~G~~~~ 501 (844)
..+.++.+ +...+|++||++|.+| |.+.+|+|+|+ .|+|++- +.+.+..
T Consensus 252 ~~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G----~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~ni 317 (385)
T TIGR00215 252 LQLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIK----TPMVVGYRMKPLTFLIARRLVKTDYISLPNI 317 (385)
T ss_pred CcEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcC----CCEEEEEcCCHHHHHHHHHHHcCCeeeccHH
Confidence 13544333 3457999999999999 77788999996 6777762 2222222
Q ss_pred c-cCCeE--EE-CCCCHHHHHHHHHHHhcCC
Q 003145 502 L-GAGAI--LV-NPWNITEVANAIARALNMS 528 (844)
Q Consensus 502 l-g~~g~--lv-nP~d~~~~A~ai~~aL~m~ 528 (844)
+ +.+++ ++ .-.+++.+++++.++|.++
T Consensus 318 l~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 318 LANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred hcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 3 22221 11 3356889999999999876
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=1e-06 Score=89.50 Aligned_cols=59 Identities=17% Similarity=0.169 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCc---chhhhcC------CHHHHHHHH
Q 003145 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINS---LSKEKKR------KVHQLFGIF 834 (844)
Q Consensus 769 KG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~---~a~~~l~------~~~~v~~~l 834 (844)
|..+++.++++++ .+++++++||| +.+| |++ |++++|+++.+. .|.+.+. .+.++..+|
T Consensus 97 k~~~l~~~~~~~g------l~~~ev~~VGD-s~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i 168 (183)
T PRK09484 97 KLIAFSDLLEKLA------IAPEQVAYIGD-DLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAVREVCDLL 168 (183)
T ss_pred HHHHHHHHHHHhC------CCHHHEEEECC-CHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHHHHHHHHH
Confidence 6688899999998 67899999999 9999 666 889999886543 2445554 467776655
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.3e-06 Score=82.29 Aligned_cols=63 Identities=19% Similarity=0.297 Sum_probs=48.8
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 593 Li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
+++||+||||++...... ......+.+.+.+.|++|+++ |+.++|+||+....+..+++..++
T Consensus 1 ~~vfD~D~tl~~~~~~~~------~~~~~~~~~~~~~~l~~l~~~-g~~i~ivS~~~~~~~~~~~~~~~~ 63 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIA------EIEELELYPGVKEALKELKEK-GIKLALATNKSRREVLELLEELGL 63 (139)
T ss_pred CeEEccCCceEccCcccc------ccccCCcCcCHHHHHHHHHHC-CCeEEEEeCchHHHHHHHHHHcCC
Confidence 489999999998742100 001236788999999999984 899999999999999988887543
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.30 E-value=2.1e-06 Score=84.74 Aligned_cols=66 Identities=15% Similarity=0.072 Sum_probs=51.2
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCC---cchhhhcCCHHH---HHHHHHHH
Q 003145 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSIN---SLSKEKKRKVHQ---LFGIFLRF 837 (844)
Q Consensus 768 nKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~---~~a~~~l~~~~~---v~~~l~~~ 837 (844)
+|..++.+++++++ .+++.++++|| +.|| |++ +++++|.++.+ ..|++.+.++.. +..+++.+
T Consensus 76 ~k~~~~~~~~~~~~------~~~~~~~~vGD-s~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~~ 148 (154)
T TIGR01670 76 NKLIAFSDILEKLA------LAPENVAYIGD-DLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCELL 148 (154)
T ss_pred chHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHHHHH
Confidence 48889999999988 67899999999 9999 776 89999999864 345556666643 66777776
Q ss_pred hhc
Q 003145 838 SYS 840 (844)
Q Consensus 838 ~~~ 840 (844)
..+
T Consensus 149 ~~~ 151 (154)
T TIGR01670 149 LLA 151 (154)
T ss_pred HHh
Confidence 654
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=98.27 E-value=0.00012 Score=84.24 Aligned_cols=121 Identities=14% Similarity=0.216 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHH
Q 003145 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 458 (844)
Q Consensus 379 ~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 458 (844)
...|+|++.+.+..|++. |=+ |.++ + +...|.++ . +| ..++.+.+ .....+..+|.
T Consensus 291 s~~I~~i~~Lv~~lPd~~----f~I-ga~t--e------~s~kL~~L-~----~y-----~nvvly~~-~~~~~l~~ly~ 346 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYH----FHI-AALT--E------MSSKLMSL-D----KY-----DNVKLYPN-ITTQKIQELYQ 346 (438)
T ss_pred HHHHHHHHHHHHhCCCcE----EEE-EecC--c------ccHHHHHH-H----hc-----CCcEEECC-cChHHHHHHHH
Confidence 899999999999999865 543 5443 1 11233333 2 22 13554454 44567889999
Q ss_pred hCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEe--CCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCH
Q 003145 459 VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS--EFAGAAQSLGAGAILVNPWNITEVANAIARALNMSP 529 (844)
Q Consensus 459 ~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlS--e~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~ 529 (844)
.||++|.+|..||+++.+.||+.. |.+|+| ...|..+.+ ..|.++++.|+++++++|.++|.++.
T Consensus 347 ~~dlyLdin~~e~~~~al~eA~~~-----G~pI~afd~t~~~~~~i-~~g~l~~~~~~~~m~~~i~~lL~d~~ 413 (438)
T TIGR02919 347 TCDIYLDINHGNEILNAVRRAFEY-----NLLILGFEETAHNRDFI-ASENIFEHNEVDQLISKLKDLLNDPN 413 (438)
T ss_pred hccEEEEccccccHHHHHHHHHHc-----CCcEEEEecccCCcccc-cCCceecCCCHHHHHHHHHHHhcCHH
Confidence 999999999999999999999997 556665 444555555 55999999999999999999998764
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=3.7e-07 Score=100.55 Aligned_cols=64 Identities=16% Similarity=0.206 Sum_probs=49.9
Q ss_pred CCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCc---chhhhcCCHHHHHHHHHHHh
Q 003145 766 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINS---LSKEKKRKVHQLFGIFLRFS 838 (844)
Q Consensus 766 gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~---~a~~~l~~~~~v~~~l~~~~ 838 (844)
+-.|+.+++++++++| ++++.+++||| +.|| |++ |++|+| ||.+. .|++.++ +.++-.+|--|+
T Consensus 246 ~k~K~~~L~~la~~lg------i~~~qtIaVGD-g~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~-~~~l~~~l~~~~ 316 (322)
T PRK11133 246 AQYKADTLTRLAQEYE------IPLAQTVAIGD-GANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIR-HADLMGVLCILS 316 (322)
T ss_pred cccHHHHHHHHHHHcC------CChhhEEEEEC-CHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEec-CcCHHHHHHHhc
Confidence 3589999999999998 78999999999 9999 887 999999 88764 5555564 444555544443
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.16 E-value=3.1e-06 Score=83.76 Aligned_cols=77 Identities=14% Similarity=0.097 Sum_probs=55.4
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHH---Hhhcc-----cC---
Q 003145 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD---KNFQE-----YN--- 661 (844)
Q Consensus 593 Li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~---~~~~~-----l~--- 661 (844)
++++|+||||+..... ++...-+ ....+++.+.+++++|.+ .|+.|+++|||+..... +++.. .+
T Consensus 1 iVisDIDGTL~~sd~~-~~~~~~~--~~~~~~~~~~~a~~~l~~-~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~ 76 (157)
T smart00775 1 IVISDIDGTITKSDVL-GHVVPII--GKDWTHPGVAKLYRDIQN-NGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH 76 (157)
T ss_pred CEEEecCCCCcccccc-ccccccc--ccCcCCHHHHHHHHHHHH-cCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC
Confidence 4899999999987310 0000000 013678999999999998 59999999999988774 67766 22
Q ss_pred ceEEeecceEEE
Q 003145 662 LWLAAENGMFLR 673 (844)
Q Consensus 662 l~liaenG~~i~ 673 (844)
..+++.||+++.
T Consensus 77 g~li~~~g~~~~ 88 (157)
T smart00775 77 GPVLLSPDRLFA 88 (157)
T ss_pred ceEEEcCCcchh
Confidence 368889998885
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.003 Score=70.62 Aligned_cols=221 Identities=20% Similarity=0.243 Sum_probs=141.0
Q ss_pred ccHHHHHhhhc-CCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHH
Q 003145 277 SRSDLLRAVLA-ADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKE 355 (844)
Q Consensus 277 ~r~~ll~~ll~-aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~ 355 (844)
.+..+.+.|+. .|+|.-|+..+.+.|.+ ||... +..-|. .|..+-| .+........
T Consensus 166 k~~~~~~~~~~~i~li~aQse~D~~Rf~~-----LGa~~----v~v~GN-lKfd~~~-------------~~~~~~~~~~ 222 (419)
T COG1519 166 KLKFLARLLFKNIDLILAQSEEDAQRFRS-----LGAKP----VVVTGN-LKFDIEP-------------PPQLAAELAA 222 (419)
T ss_pred HHHHHHHHHHHhcceeeecCHHHHHHHHh-----cCCcc----eEEecc-eeecCCC-------------ChhhHHHHHH
Confidence 45667777764 69999999999999986 44331 111111 1211111 1222345567
Q ss_pred HHHHhCC-CcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccC
Q 003145 356 LQETFAG-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFG 434 (844)
Q Consensus 356 lr~~~~~-~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g 434 (844)
+|..+++ +++++..+. ...--...+.++..+++++|+.. |++| |- .||. -..+++++.+.+-+++
T Consensus 223 ~r~~l~~~r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~l----lIlV--PR---HpER---f~~v~~l~~~~gl~~~ 288 (419)
T COG1519 223 LRRQLGGHRPVWVAAST--HEGEEEIILDAHQALKKQFPNLL----LILV--PR---HPER---FKAVENLLKRKGLSVT 288 (419)
T ss_pred HHHhcCCCCceEEEecC--CCchHHHHHHHHHHHHhhCCCce----EEEe--cC---Chhh---HHHHHHHHHHcCCeEE
Confidence 7888876 899999988 33334447889999999999753 4433 42 3442 3467777777776554
Q ss_pred CCCc-------ccEEEeCCCCCHHHHHHHHHhCcEEEEcC-C--CcCCChhHhhhhhcccCCCceEEEe----CCCCchh
Q 003145 435 TLTA-------VPIHHLDRSLDFPALCALYAVTDVALVTS-L--RDGMNLVSYEFVACQDLKKGVLILS----EFAGAAQ 500 (844)
Q Consensus 435 ~~~~-------~pv~~~~~~v~~~el~aly~~ADv~v~~S-~--~EG~~Lv~~Eama~~~~~~g~lVlS----e~~G~~~ 500 (844)
.-+. .+|.. . -+.-|+..+|+.|||+.+-- + .-|.| ++|+.+++ .|+|.- .|.-+++
T Consensus 289 ~rS~~~~~~~~tdV~l-~--DtmGEL~l~y~~adiAFVGGSlv~~GGHN--~LEpa~~~----~pvi~Gp~~~Nf~ei~~ 359 (419)
T COG1519 289 RRSQGDPPFSDTDVLL-G--DTMGELGLLYGIADIAFVGGSLVPIGGHN--PLEPAAFG----TPVIFGPYTFNFSDIAE 359 (419)
T ss_pred eecCCCCCCCCCcEEE-E--ecHhHHHHHHhhccEEEECCcccCCCCCC--hhhHHHcC----CCEEeCCccccHHHHHH
Confidence 3211 23432 1 14579999999999987743 3 35666 58999994 555543 4444444
Q ss_pred hc-c-CCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Q 003145 501 SL-G-AGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTH 546 (844)
Q Consensus 501 ~l-g-~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 546 (844)
.+ . .+|+.|+ |.+.++.++..+++. +++|.++.+++.+.+.++
T Consensus 360 ~l~~~ga~~~v~--~~~~l~~~v~~l~~~-~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 360 RLLQAGAGLQVE--DADLLAKAVELLLAD-EDKREAYGRAGLEFLAQN 404 (419)
T ss_pred HHHhcCCeEEEC--CHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHh
Confidence 44 2 3467776 477777777777765 778888888888888665
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=97.98 E-value=1.2e-05 Score=76.03 Aligned_cols=54 Identities=13% Similarity=0.112 Sum_probs=41.9
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHH
Q 003145 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD 654 (844)
Q Consensus 592 rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~ 654 (844)
|+|++|+||||+.....+- ....+.++++++|++|.+ .|+.|+++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y--------~~~~~~~~~ie~L~~l~~-~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDY--------ANVAPILAVIEKLRHYKA-LGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcc--------cccccCHHHHHHHHHHHH-CCCEEEEECCCCchhhh
Confidence 6899999999987532110 124578999999999987 59999999999987543
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=97.96 E-value=1.8e-05 Score=79.13 Aligned_cols=47 Identities=15% Similarity=0.229 Sum_probs=38.4
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcchh
Q 003145 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSLSK 821 (844)
Q Consensus 768 nKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~a~ 821 (844)
.|-..++.++++++ ++++.+++||| +.|| |++ +++++|+||.+.+.+
T Consensus 82 pkp~~~~~~~~~l~------~~~~ev~~iGD-~~nDi~~~~~ag~~~am~nA~~~lk~ 132 (169)
T TIGR02726 82 KKTEPYAQMLEEMN------ISDAEVCYVGD-DLVDLSMMKRVGLAVAVGDAVADVKE 132 (169)
T ss_pred CCHHHHHHHHHHcC------cCHHHEEEECC-CHHHHHHHHHCCCeEECcCchHHHHH
Confidence 45567788888887 67899999999 9999 777 999999999765433
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=97.78 E-value=4.6e-05 Score=81.48 Aligned_cols=73 Identities=15% Similarity=0.267 Sum_probs=59.0
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCC-ChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCce----
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKL-HPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLW---- 663 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~-~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~---- 663 (844)
.-.++|+||+||||++... ..++ +|.+.++|.+|.+ .|+.++|+|++++..+...++.+++.
T Consensus 124 ~~~kvIvFDLDgTLi~~~~------------~v~irdPgV~EaL~~Lke-kGikLaIaTS~~Re~v~~~L~~lGLd~YFd 190 (301)
T TIGR01684 124 EPPHVVVFDLDSTLITDEE------------PVRIRDPRIYDSLTELKK-RGCILVLWSYGDRDHVVESMRKVKLDRYFD 190 (301)
T ss_pred ccceEEEEecCCCCcCCCC------------ccccCCHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHcCCCcccC
Confidence 3467999999999998842 1224 5999999999998 59999999999999999888888652
Q ss_pred EEeecceEEEe
Q 003145 664 LAAENGMFLRC 674 (844)
Q Consensus 664 liaenG~~i~~ 674 (844)
.|..+|...+.
T Consensus 191 vIIs~Gdv~~~ 201 (301)
T TIGR01684 191 IIISGGHKAEE 201 (301)
T ss_pred EEEECCccccC
Confidence 67778877653
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00027 Score=75.79 Aligned_cols=71 Identities=15% Similarity=0.238 Sum_probs=55.6
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCC-ChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCce----E
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKL-HPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLW----L 664 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~-~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~----l 664 (844)
-.++|+||+||||++... ..++ +|.+.++|.+|.+ .|..++|+|+.+...+...++.+++. .
T Consensus 127 ~~~~i~~D~D~TL~~~~~------------~v~irdp~V~EtL~eLke-kGikLaIvTNg~Re~v~~~Le~lgL~~yFDv 193 (303)
T PHA03398 127 IPHVIVFDLDSTLITDEE------------PVRIRDPFVYDSLDELKE-RGCVLVLWSYGNREHVVHSLKETKLEGYFDI 193 (303)
T ss_pred eccEEEEecCCCccCCCC------------ccccCChhHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHHcCCCccccE
Confidence 458999999999998842 1222 5899999999998 69999999988888888888887542 5
Q ss_pred EeecceEEE
Q 003145 665 AAENGMFLR 673 (844)
Q Consensus 665 iaenG~~i~ 673 (844)
+..+|....
T Consensus 194 II~~g~i~~ 202 (303)
T PHA03398 194 IICGGRKAG 202 (303)
T ss_pred EEECCCccc
Confidence 666666554
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00097 Score=69.33 Aligned_cols=61 Identities=18% Similarity=0.221 Sum_probs=46.8
Q ss_pred EEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCC--CcchhhhcCCH
Q 003145 760 VEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSI--NSLSKEKKRKV 827 (844)
Q Consensus 760 vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~--~~~a~~~l~~~ 827 (844)
+-..-.+-.|..+++.+++.+| ++++.++++|| +.|| ||+ +.+|++.... ...|+.++...
T Consensus 136 ~g~~~~~~~K~~~l~~~~~~~g------~~~~~~~a~gD-s~nDlpml~~ag~~ia~n~~~~l~~~a~~~~~~~ 202 (212)
T COG0560 136 VGPICDGEGKAKALRELAAELG------IPLEETVAYGD-SANDLPMLEAAGLPIAVNPKPKLRALADVRIWPI 202 (212)
T ss_pred eeeecCcchHHHHHHHHHHHcC------CCHHHeEEEcC-chhhHHHHHhCCCCeEeCcCHHHHHHHHHhcChh
Confidence 3344455689999999999999 77899999999 9999 998 8999987753 23444455444
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0032 Score=65.40 Aligned_cols=51 Identities=10% Similarity=0.066 Sum_probs=38.2
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCC--CcchhhhcC
Q 003145 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSI--NSLSKEKKR 825 (844)
Q Consensus 768 nKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~--~~~a~~~l~ 825 (844)
.|+..++.++++++ .+++.++++|| +.+| +.+ |++|+++... ...|++-+.
T Consensus 152 ~k~~~~~~~~~~~~------~~~~~~i~iGD-s~~Di~aa~~ag~~i~~~~~~~~~~~a~~~i~ 208 (219)
T TIGR00338 152 YKGKTLLILLRKEG------ISPENTVAVGD-GANDLSMIKAAGLGIAFNAKPKLQQKADICIN 208 (219)
T ss_pred ccHHHHHHHHHHcC------CCHHHEEEEEC-CHHHHHHHHhCCCeEEeCCCHHHHHhchhccC
Confidence 48999999999988 67899999999 8899 444 7888886432 134455544
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.001 Score=63.37 Aligned_cols=65 Identities=20% Similarity=0.291 Sum_probs=48.9
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCC--------hhhHHHhhcccCce
Q 003145 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD--------RNVLDKNFQEYNLW 663 (844)
Q Consensus 592 rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~--------~~~l~~~~~~l~l~ 663 (844)
|+++||+||||++.... ..+.....+.+.+.++|+.|.+ .|..++|+|+++ ...+...++.+++.
T Consensus 1 k~~~~D~dgtL~~~~~~------~~~~~~~~~~~~v~~~l~~L~~-~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~ 73 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPY------VDDEDERILYPEVPDALAELKE-AGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP 73 (132)
T ss_pred CEEEEeCCCceecCCCC------CCCHHHheeCCCHHHHHHHHHH-CCCEEEEEECCccccccHHHHHHHHHHHHHCCCC
Confidence 68999999999953110 0011245678899999999987 599999999999 77788888776553
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.13 Score=56.06 Aligned_cols=138 Identities=16% Similarity=0.207 Sum_probs=98.6
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHHHh-------CcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccC
Q 003145 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEE-------NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFG 434 (844)
Q Consensus 362 ~~~vil~VdRld~~KGi~~~l~Af~~ll~~-------~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g 434 (844)
...++++--.+.+-..+.-+++|+..+-++ .|. + |.+|+ |.||..+.+.++|++.
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~----l-lciIT----GKGPlkE~Y~~~I~~~--------- 315 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPS----L-LCIIT----GKGPLKEKYSQEIHEK--------- 315 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCc----E-EEEEc----CCCchhHHHHHHHHHh---------
Confidence 356788888899999999999999855221 232 2 33343 2456666666666654
Q ss_pred CCCcccEEEeCCCCCHHHHHHHHHhCcEE--EEcCCCcCCChh--HhhhhhcccCCCceEEEeCCCCchhhc--cCCeEE
Q 003145 435 TLTAVPIHHLDRSLDFPALCALYAVTDVA--LVTSLRDGMNLV--SYEFVACQDLKKGVLILSEFAGAAQSL--GAGAIL 508 (844)
Q Consensus 435 ~~~~~pv~~~~~~v~~~el~aly~~ADv~--v~~S~~EG~~Lv--~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~l 508 (844)
.|+.|.+.+..+.-++++.++..||.. +.||. -|.-|+ +....-|+ .|+++-.|.-..|.+ |+||++
T Consensus 316 --~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSS-SGLDLPMKVVDMFGcg----lPvcA~~fkcl~ELVkh~eNGlv 388 (444)
T KOG2941|consen 316 --NLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSS-SGLDLPMKVVDMFGCG----LPVCAVNFKCLDELVKHGENGLV 388 (444)
T ss_pred --cccceeeeecccccccchhHhhccccceEeeecC-cccCcchhHHHhhcCC----CceeeecchhHHHHHhcCCCceE
Confidence 456788888899999999999999965 45665 455444 55666673 456666776555555 889999
Q ss_pred ECCCCHHHHHHHHHHHhc
Q 003145 509 VNPWNITEVANAIARALN 526 (844)
Q Consensus 509 vnP~d~~~~A~ai~~aL~ 526 (844)
++ |.+++|+.|..+.+
T Consensus 389 F~--Ds~eLa~ql~~lf~ 404 (444)
T KOG2941|consen 389 FE--DSEELAEQLQMLFK 404 (444)
T ss_pred ec--cHHHHHHHHHHHHh
Confidence 96 89999999999987
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0024 Score=60.92 Aligned_cols=65 Identities=14% Similarity=0.095 Sum_probs=44.1
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCC-ChhhHHHhhcc
Q 003145 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS-DRNVLDKNFQE 659 (844)
Q Consensus 592 rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR-~~~~l~~~~~~ 659 (844)
|+|++|+||||++.....- ....+ ....++-+.+.+.|+.|.+ .|..++|+|++ +.......++.
T Consensus 1 kli~~DlD~Tl~~~~~~~~-~~~~~-~~~~~~~~gv~e~L~~Lk~-~g~~l~i~Sn~~~~~~~~~~l~~ 66 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVV-GEDPI-IDLEVTIKEIRDKLQTLKK-NGFLLALASYNDDPHVAYELLKI 66 (128)
T ss_pred CEEEEeCCCCCCCCCcccc-cCCcc-hhhHHHHHHHHHHHHHHHH-CCeEEEEEeCCCCHHHHHHHHHh
Confidence 6899999999998732100 00000 0000357899999999987 59999999999 77666665554
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.002 Score=68.71 Aligned_cols=65 Identities=5% Similarity=0.154 Sum_probs=51.4
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcC---CChhhHHHhhcccCc-----e
Q 003145 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKNFQEYNL-----W 663 (844)
Q Consensus 592 rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SG---R~~~~l~~~~~~l~l-----~ 663 (844)
|+|+||+||||.... ..+ +.+.++|++|.+ .|..|+++|| |+...+.+.+..+++ .
T Consensus 2 ~~~~~D~DGtl~~~~--------------~~i-~~a~~~l~~l~~-~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~ 65 (249)
T TIGR01457 2 KGYLIDLDGTMYKGK--------------ERI-PEAETFVHELQK-RDIPYLFVTNNSTRTPESVAEMLASFDIPATLET 65 (249)
T ss_pred CEEEEeCCCceEcCC--------------eeC-cCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhh
Confidence 689999999999762 223 478999999998 5999999995 899998888887743 3
Q ss_pred EEeecceEE
Q 003145 664 LAAENGMFL 672 (844)
Q Consensus 664 liaenG~~i 672 (844)
+++.+|+..
T Consensus 66 iit~~~~~~ 74 (249)
T TIGR01457 66 VFTASMATA 74 (249)
T ss_pred EeeHHHHHH
Confidence 667777643
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0015 Score=69.62 Aligned_cols=54 Identities=11% Similarity=0.114 Sum_probs=45.9
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (844)
.++|+||+||||.... .+.|.+.++|+.|.+ .|..++++|||+......+.+.+
T Consensus 1 ~~~v~~DlDGtL~~~~---------------~~~p~a~~~l~~L~~-~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 1 IKNVICDIDGVLMHDN---------------VAVPGAAEFLHRILD-KGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CcEEEEeCCCceEeCC---------------eeCccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHH
Confidence 3689999999999762 467889999999998 59999999999998777777765
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0015 Score=70.15 Aligned_cols=56 Identities=7% Similarity=0.112 Sum_probs=42.5
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcc
Q 003145 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (844)
Q Consensus 592 rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 659 (844)
|+|+||+||||...... ...+.|.+.++|++|.+ .|..++++|||+....+.....
T Consensus 2 k~i~~D~DGtl~~~~~~-----------~~~~~~~a~~al~~l~~-~G~~~~~~Tn~~~~~~~~~~~~ 57 (257)
T TIGR01458 2 KGVLLDISGVLYISDAK-----------SGVAVPGSQEAVKRLRG-ASVKVRFVTNTTKESKQDLLER 57 (257)
T ss_pred CEEEEeCCCeEEeCCCc-----------ccCcCCCHHHHHHHHHH-CCCeEEEEECCCCCCHHHHHHH
Confidence 68999999999976310 11267799999999998 5999999999887764444333
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.041 Score=59.57 Aligned_cols=64 Identities=11% Similarity=0.048 Sum_probs=47.5
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCchhhc----cC-cEEEeCC--C-----CcchhhhcCCHHHHHHHHH
Q 003145 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVLLT----QF-LIQVGSS--I-----NSLSKEKKRKVHQLFGIFL 835 (844)
Q Consensus 768 nKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDMf~----g~-~Iavgna--~-----~~~a~~~l~~~~~v~~~l~ 835 (844)
.|..++..++++++ .+++.+++||| +.+|+.. |+ +|.+..+ . ...+.+.+.++.++..++.
T Consensus 196 ~k~~~~~~~l~~~~------~~p~~~l~IGD-s~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~~ 268 (273)
T PRK13225 196 SKRRALSQLVAREG------WQPAAVMYVGD-ETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQAVT 268 (273)
T ss_pred CCHHHHHHHHHHhC------cChhHEEEECC-CHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHHHH
Confidence 46788999999988 67899999999 8889554 32 3333332 2 1246778999999999988
Q ss_pred HHh
Q 003145 836 RFS 838 (844)
Q Consensus 836 ~~~ 838 (844)
+|.
T Consensus 269 ~~~ 271 (273)
T PRK13225 269 QLM 271 (273)
T ss_pred HHh
Confidence 774
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.0071 Score=63.90 Aligned_cols=84 Identities=10% Similarity=0.034 Sum_probs=56.5
Q ss_pred ccHHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccc------c---------------ccccCCChhHHHHHHHhh
Q 003145 577 LREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQI------R---------------EMELKLHPDLKQPLNALC 635 (844)
Q Consensus 577 l~~~~~~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~------~---------------~~~~~~~~~~~~~L~~L~ 635 (844)
.++++|.++....+.-.|+||+||||++....-. .+.+. . .....+-+...+.|+.|.
T Consensus 49 ~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~-~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~ 127 (237)
T TIGR01672 49 ISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFW-RGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQ 127 (237)
T ss_pred EEHHHHHHhcCCCCCeEEEEeCCCccccCcHHHh-CCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHH
Confidence 4678888888776666999999999998754100 01000 0 012233444899999998
Q ss_pred cCCCCcEEEEcCC----ChhhHHHhhcccCc
Q 003145 636 HDPKTTIVVLSGS----DRNVLDKNFQEYNL 662 (844)
Q Consensus 636 ~d~g~~V~I~SGR----~~~~l~~~~~~l~l 662 (844)
+ .|.+++|+|+| ....++.+.+.+++
T Consensus 128 ~-~G~~i~iVTnr~~~k~~~~a~~ll~~lGi 157 (237)
T TIGR01672 128 R-RGDAIFFVTGRTPGKTDTVSKTLAKNFHI 157 (237)
T ss_pred H-CCCEEEEEeCCCCCcCHHHHHHHHHHhCC
Confidence 7 59999999999 44566666665543
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0025 Score=70.38 Aligned_cols=55 Identities=11% Similarity=0.162 Sum_probs=44.1
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (844)
+.++|+||+||||.... .+-+...++|++|.+ .|.+++++|+|+......+++.+
T Consensus 27 ~~~~~~~D~DGtl~~~~---------------~~~~ga~e~l~~lr~-~g~~~~~~TN~~~~~~~~~~~~l 81 (311)
T PLN02645 27 SVETFIFDCDGVIWKGD---------------KLIEGVPETLDMLRS-MGKKLVFVTNNSTKSRAQYGKKF 81 (311)
T ss_pred hCCEEEEeCcCCeEeCC---------------ccCcCHHHHHHHHHH-CCCEEEEEeCCCCCCHHHHHHHH
Confidence 47899999999999762 244778999999998 59999999999966665555443
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.0029 Score=68.71 Aligned_cols=52 Identities=10% Similarity=0.121 Sum_probs=40.1
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhc
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 658 (844)
.++|+||+||||.... .+-+.+.++|++|.+ .|..++++|||+......++.
T Consensus 2 ~~~~~~D~DGtl~~~~---------------~~~~ga~e~l~~L~~-~g~~~~~~Tnns~~~~~~~~~ 53 (279)
T TIGR01452 2 AQGFIFDCDGVLWLGE---------------RVVPGAPELLDRLAR-AGKAALFVTNNSTKSRAEYAL 53 (279)
T ss_pred ccEEEEeCCCceEcCC---------------eeCcCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHH
Confidence 5789999999998752 234558999999997 599999999987554444433
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.024 Score=59.62 Aligned_cols=61 Identities=10% Similarity=0.024 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCchhhc----cC-cEEE--eCC--CCc----chhhhcCCHHHHHHHHH
Q 003145 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVLLT----QF-LIQV--GSS--INS----LSKEKKRKVHQLFGIFL 835 (844)
Q Consensus 769 KG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDMf~----g~-~Iav--gna--~~~----~a~~~l~~~~~v~~~l~ 835 (844)
+-..+.++++++| ++++.+++||| +.+|+.. |+ .|.+ |.. .+. -+.+.++++.++.+.|+
T Consensus 153 ~p~~~~~~~~~l~------~~p~~~l~IGD-s~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~~~ 225 (229)
T PRK13226 153 HPLPLLVAAERIG------VAPTDCVYVGD-DERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNPAT 225 (229)
T ss_pred CHHHHHHHHHHhC------CChhhEEEeCC-CHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHHhc
Confidence 4566888999998 77899999999 8899433 43 3333 221 111 26678999999999887
Q ss_pred H
Q 003145 836 R 836 (844)
Q Consensus 836 ~ 836 (844)
|
T Consensus 226 ~ 226 (229)
T PRK13226 226 W 226 (229)
T ss_pred C
Confidence 6
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.0093 Score=59.59 Aligned_cols=69 Identities=12% Similarity=0.131 Sum_probs=44.5
Q ss_pred CCeEEEEecCCccCCCCCC-CCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChh------------hHHHh
Q 003145 590 NNRLLILGFNATLTEPVDT-PGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRN------------VLDKN 656 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~-p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~------------~l~~~ 656 (844)
+.|+++||+||||+...+. +. -+.++.-..+-+.+.++|++|.+ .|..++|+|..+.. .++..
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~~---~~~~~~~~~~~pgv~e~L~~Lk~-~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~ 87 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKVF---PTSASDWRFLYPEIPAKLQELDD-EGYKIVIFTNQSGIGRGKLSAESFKNKIEAF 87 (166)
T ss_pred cCcEEEEeCCCceEecCCCCcc---cCChHHeEEecCCHHHHHHHHHH-CCCEEEEEeCCcccccCcccHHHHHHHHHHH
Confidence 4689999999999975320 00 00000111245789999999987 59999999976542 35566
Q ss_pred hcccCc
Q 003145 657 FQEYNL 662 (844)
Q Consensus 657 ~~~l~l 662 (844)
++.+++
T Consensus 88 l~~~gl 93 (166)
T TIGR01664 88 LEKLKV 93 (166)
T ss_pred HHHcCC
Confidence 666554
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.011 Score=57.08 Aligned_cols=70 Identities=19% Similarity=0.330 Sum_probs=45.3
Q ss_pred hcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 588 RSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 588 ~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
..+.||+++|.||||++-.=.-+..+..+ +..+-.--..|+.|.+ .|++|+|+|||.-.-+++..+.+++
T Consensus 5 a~~IkLli~DVDGvLTDG~ly~~~~Gee~----KaFnv~DG~Gik~l~~-~Gi~vAIITGr~s~ive~Ra~~LGI 74 (170)
T COG1778 5 AKNIKLLILDVDGVLTDGKLYYDENGEEI----KAFNVRDGHGIKLLLK-SGIKVAIITGRDSPIVEKRAKDLGI 74 (170)
T ss_pred hhhceEEEEeccceeecCeEEEcCCCcee----eeeeccCcHHHHHHHH-cCCeEEEEeCCCCHHHHHHHHHcCC
Confidence 45689999999999998531100001111 1111112234555555 5999999999999999999988764
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.55 Score=53.02 Aligned_cols=235 Identities=20% Similarity=0.220 Sum_probs=123.5
Q ss_pred CCCCEEEEeCccc--hhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHH
Q 003145 230 KDGDVVWCHDYHL--MFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACT 307 (844)
Q Consensus 230 ~~~DiVwvHDyhl--~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~ 307 (844)
+++|+|..=||.= +.+.+.+|++++..||.++. ++.+|.==++|-..++.....=+..| .+-..|.+.
T Consensus 81 ~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI-----~PqvWAWr~~R~~~i~~~~D~ll~if---PFE~~~y~~-- 150 (373)
T PF02684_consen 81 EKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYI-----SPQVWAWRPGRAKKIKKYVDHLLVIF---PFEPEFYKK-- 150 (373)
T ss_pred cCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEE-----CCceeeeCccHHHHHHHHHhheeECC---cccHHHHhc--
Confidence 3568888888774 35888999998888888765 34444322445444443322211111 111222210
Q ss_pred HHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh--CCCcEE-EE-EecccccCCH-HHHH
Q 003145 308 RILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKVM-LG-VDRLDMIKGI-PQKL 382 (844)
Q Consensus 308 ~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vi-l~-VdRld~~KGi-~~~l 382 (844)
.|++ ..|=|++ =+|.- .+ ... ....++.+ .++++| +. =+|-...|-+ +..+
T Consensus 151 --~g~~-----~~~VGHP--------l~d~~--~~---~~~----~~~~~~~~l~~~~~iIaLLPGSR~~EI~rllP~~l 206 (373)
T PF02684_consen 151 --HGVP-----VTYVGHP--------LLDEV--KP---EPD----RAEAREKLLDPDKPIIALLPGSRKSEIKRLLPIFL 206 (373)
T ss_pred --cCCC-----eEEECCc--------chhhh--cc---CCC----HHHHHHhcCCCCCcEEEEeCCCCHHHHHHHHHHHH
Confidence 0100 1122221 12221 11 111 11122222 344433 33 3477655554 8889
Q ss_pred HHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcE
Q 003145 383 LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 462 (844)
Q Consensus 383 ~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv 462 (844)
+|.+++.+++|+++ +++...+. .. .+.+.+.....+.. .++... ..+...+++.||+
T Consensus 207 ~aa~~l~~~~p~l~----fvvp~a~~-----~~---~~~i~~~~~~~~~~------~~~~~~-----~~~~~~~m~~ad~ 263 (373)
T PF02684_consen 207 EAAKLLKKQRPDLQ----FVVPVAPE-----VH---EELIEEILAEYPPD------VSIVII-----EGESYDAMAAADA 263 (373)
T ss_pred HHHHHHHHhCCCeE----EEEecCCH-----HH---HHHHHHHHHhhCCC------CeEEEc-----CCchHHHHHhCcc
Confidence 99999999999864 54433221 11 22233332222211 123321 2456778999999
Q ss_pred EEEcCCCcCCChhHhhhhhcccCCCceEEE-----------------eCCCCchhhc-cCC---eEEECCCCHHHHHHHH
Q 003145 463 ALVTSLRDGMNLVSYEFVACQDLKKGVLIL-----------------SEFAGAAQSL-GAG---AILVNPWNITEVANAI 521 (844)
Q Consensus 463 ~v~~S~~EG~~Lv~~Eama~~~~~~g~lVl-----------------Se~~G~~~~l-g~~---g~lvnP~d~~~~A~ai 521 (844)
.+++| |.+.+|++..+ .|.|+ ..+.|....+ |.. =++-+-.+++.+++++
T Consensus 264 al~~S-----GTaTLE~Al~g----~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~ 334 (373)
T PF02684_consen 264 ALAAS-----GTATLEAALLG----VPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAEL 334 (373)
T ss_pred hhhcC-----CHHHHHHHHhC----CCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHH
Confidence 99998 78999999986 44443 2333444333 211 1223446889999999
Q ss_pred HHHhcCCHH
Q 003145 522 ARALNMSPE 530 (844)
Q Consensus 522 ~~aL~m~~~ 530 (844)
..+|.+++.
T Consensus 335 ~~ll~~~~~ 343 (373)
T PF02684_consen 335 LELLENPEK 343 (373)
T ss_pred HHHhcCHHH
Confidence 999987653
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.026 Score=55.37 Aligned_cols=66 Identities=17% Similarity=0.185 Sum_probs=57.0
Q ss_pred HHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCceEE
Q 003145 586 YLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLA 665 (844)
Q Consensus 586 y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~li 665 (844)
.++...|-|++|+|.||++.. ....+|++++-+.++.. .|..|+|+|.-+..-+..+...+++.+|
T Consensus 23 L~~~Gikgvi~DlDNTLv~wd-------------~~~~tpe~~~W~~e~k~-~gi~v~vvSNn~e~RV~~~~~~l~v~fi 88 (175)
T COG2179 23 LKAHGIKGVILDLDNTLVPWD-------------NPDATPELRAWLAELKE-AGIKVVVVSNNKESRVARAAEKLGVPFI 88 (175)
T ss_pred HHHcCCcEEEEeccCceeccc-------------CCCCCHHHHHHHHHHHh-cCCEEEEEeCCCHHHHHhhhhhcCCcee
Confidence 445678999999999999984 35578999999999998 6999999999999999988888877665
|
|
| >PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.88 Score=50.47 Aligned_cols=215 Identities=13% Similarity=0.145 Sum_probs=120.9
Q ss_pred ccHHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHh
Q 003145 577 LREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 656 (844)
Q Consensus 577 l~~~~~~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~ 656 (844)
||++++..--+..+-+|+-||=|+||-+++. .-..+..++.-|-+|-+ .|..|.|+|.=.+....++
T Consensus 133 LN~AQi~al~~~~~L~LvTFDgDvTLY~DG~------------sl~~d~pvi~~ii~LL~-~gv~VgIVTAAGY~~a~kY 199 (408)
T PF06437_consen 133 LNTAQIMALAKNYGLKLVTFDGDVTLYEDGA------------SLEPDNPVIPRIIKLLR-RGVKVGIVTAAGYPGAEKY 199 (408)
T ss_pred HHHHHHHHhcccCCceEEEEcCCcccccCCC------------CCCCCchHHHHHHHHHh-cCCeEEEEeCCCCCChHHH
Confidence 4556666554555789999999999999863 22345556666666666 4999999999888876655
Q ss_pred hccc-C------------------c-eEEeecceEEEec-----------CCeeeecccccCChHHH-HHHHHHHHH---
Q 003145 657 FQEY-N------------------L-WLAAENGMFLRCT-----------TGKWMTTMPEHLNMEWV-DSLKHVFEY--- 701 (844)
Q Consensus 657 ~~~l-~------------------l-~liaenG~~i~~~-----------~~~w~~~~~~~~~~~w~-~~v~~i~~~--- 701 (844)
...+ + + .+-+|--+.++.. ..+|.. | ....|. +.+.++++.
T Consensus 200 ~~RL~GLL~a~~~~~~Lt~~qk~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~--~--~m~~W~~~dI~~lLD~AE~ 275 (408)
T PF06437_consen 200 EERLHGLLDAFKDSTDLTPEQKSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLL--P--EMKTWSEEDITELLDIAEA 275 (408)
T ss_pred HHHHHHHHHHHHhccCCCHHHhcCEEEecccceeEEEecCCCCCCeEEccHHhccC--c--cccCcCHHHHHHHHHHHHH
Confidence 5443 1 1 2334444444431 224532 1 112453 244444432
Q ss_pred ----HHh--cCCCceEeeccceEEEEeecCChhhhHHHH----HHHHHHHhcCC--CCCCCeEEEEcCc--EEEEEeCCC
Q 003145 702 ----FTE--RTPRSHFEQRETSLVWNYKYADVEFGRIQA----RDMLQHLWTGP--ISNASVEVVQGSK--SVEVRAVGV 767 (844)
Q Consensus 702 ----~~~--rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa----~el~~~L~~~~--~~~~~~~v~~g~~--~vEV~p~gv 767 (844)
... +.| ..|-.|+-++..--.. .......|. -.+++.| +.. -..-++-...|.+ +|+| -
T Consensus 276 ~L~~~~~~l~Lp-a~IiRK~RAVGivP~~-~~ki~rE~LEE~VL~vq~~L-~~~~~~~~ipfCAFNGGsDVwVDI----G 348 (408)
T PF06437_consen 276 ALRDCVKRLNLP-ATIIRKERAVGIVPKP-GVKIIREQLEEIVLTVQKTL-EESPPGRRIPFCAFNGGSDVWVDI----G 348 (408)
T ss_pred HHHHHHHHcCCC-eeEEeecceeeEecCC-CCcchhhhHHHHHHHHHHHH-HhcCCCCCCceeeecCCcceEEEc----C
Confidence 222 234 4455666655443211 111112222 2334444 221 1234555666544 5666 3
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCceEEEEee-C---CCchhhc---cCcEEEeCCCC
Q 003145 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGH-F---LGKVLLT---QFLIQVGSSIN 817 (844)
Q Consensus 768 nKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD-~---~~nDMf~---g~~Iavgna~~ 817 (844)
||.-++..+.+.+. +...+.+.+++-+|| | +-||.-. +.++.+.|-.+
T Consensus 349 dKs~GV~~lQ~y~~--~~~~i~~~~tLHVGDQF~s~GaNDfkaR~a~~t~WIasP~E 403 (408)
T PF06437_consen 349 DKSLGVRALQKYFD--PEGGIKPSETLHVGDQFLSAGANDFKARLACTTAWIASPQE 403 (408)
T ss_pred CcHHhHHHHHHHHH--hccCCCccceeeehhhhhccCCcchhhhhhceeeEecCHHH
Confidence 78889988888881 111278899999999 3 3488433 66777766443
|
; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.016 Score=56.47 Aligned_cols=54 Identities=19% Similarity=0.187 Sum_probs=39.1
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCCh
Q 003145 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (844)
Q Consensus 592 rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~ 650 (844)
+.++||+||||++..... .... ....++-+.+.++|+.|.+ .|..++|+|+.+.
T Consensus 1 ~~~~~d~dgtl~~~~~~~--~~~~--~~~~~~~~g~~~~l~~Lk~-~g~~~~I~Sn~~~ 54 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSD--YPRS--LDDWQLRPGAVPALLTLRA-AGYTVVVVTNQSG 54 (147)
T ss_pred CeEEEeCCCceeccCCcc--cCCC--HHHeEEcCChHHHHHHHHH-CCCEEEEEeCCCc
Confidence 478999999999874210 0011 1234567889999999987 5999999998763
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.35 Score=55.89 Aligned_cols=203 Identities=13% Similarity=0.128 Sum_probs=104.5
Q ss_pred EecccChhHHhhhhcCCc-hHHH-HHHHHHHh---CCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEE
Q 003145 331 FPIGIDSERFIRALEINP-VQVH-IKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIA 405 (844)
Q Consensus 331 ~P~GID~~~f~~~~~~~~-~~~~-~~~lr~~~---~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~ 405 (844)
+-+|.-.......+...+ +... +..-|+.| .+..++.+..++ .|=-+..++++.++|+.-|+-+ |++..
T Consensus 248 ~~~~~~~~~~~~~~~~g~~~~~~~v~~~R~~~gLp~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~----L~L~~ 321 (468)
T PF13844_consen 248 VQNGLATTQTNNKAATGEEVPQNIVVTTRAQYGLPEDAVVFGSFNNL--FKISPETLDLWARILKAVPNSR----LWLLR 321 (468)
T ss_dssp EEECCGHHHH-HHHHTTSS--SSEEEEETGGGT--SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEE----EEEEE
T ss_pred eecccchhhhhccccCCccCCccccccCHHHcCCCCCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcE----EEEee
Confidence 467777766654433221 1100 01124445 244444445564 5667999999999999999754 76665
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccC
Q 003145 406 VPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDL 485 (844)
Q Consensus 406 ~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~ 485 (844)
.|. ... +.+.+.+.+ .|-. -..++| .+..+.++..+.|+.+||+|-|..+-| +.+.+||+.+
T Consensus 322 ~~~--~~~------~~l~~~~~~----~Gv~-~~Ri~f-~~~~~~~ehl~~~~~~DI~LDT~p~nG-~TTt~dALwm--- 383 (468)
T PF13844_consen 322 FPA--SGE------ARLRRRFAA----HGVD-PDRIIF-SPVAPREEHLRRYQLADICLDTFPYNG-GTTTLDALWM--- 383 (468)
T ss_dssp TST--THH------HHHHHHHHH----TTS--GGGEEE-EE---HHHHHHHGGG-SEEE--SSS---SHHHHHHHHH---
T ss_pred CCH--HHH------HHHHHHHHH----cCCC-hhhEEE-cCCCCHHHHHHHhhhCCEEeeCCCCCC-cHHHHHHHHc---
Confidence 443 111 223333332 2321 224665 667788999999999999999987766 5678999999
Q ss_pred CCceEEEeCCCCc-h-----hhc---cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH---hcCHHHHHH
Q 003145 486 KKGVLILSEFAGA-A-----QSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT---THTAQEWAE 553 (844)
Q Consensus 486 ~~g~lVlSe~~G~-~-----~~l---g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~---~~~~~~W~~ 553 (844)
|++|+|--+-. + ..| |-.-++ ..|.++..+.-.++.+++ +.++...+++++... -++...|++
T Consensus 384 --GVPvVTl~G~~~~sR~~aSiL~~lGl~ElI--A~s~~eYv~~Av~La~D~-~~l~~lR~~Lr~~~~~SpLfd~~~~ar 458 (468)
T PF13844_consen 384 --GVPVVTLPGETMASRVGASILRALGLPELI--ADSEEEYVEIAVRLATDP-ERLRALRAKLRDRRSKSPLFDPKRFAR 458 (468)
T ss_dssp --T--EEB---SSGGGSHHHHHHHHHT-GGGB---SSHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHSGGG-HHHHHH
T ss_pred --CCCEEeccCCCchhHHHHHHHHHcCCchhc--CCCHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHhhCCCCCHHHHHH
Confidence 67776632211 1 111 322222 246677666656665644 344444445554442 268888888
Q ss_pred HHHHHHHHh
Q 003145 554 TFVSELNDT 562 (844)
Q Consensus 554 ~fl~~l~~~ 562 (844)
.|...+...
T Consensus 459 ~lE~a~~~m 467 (468)
T PF13844_consen 459 NLEAAYRQM 467 (468)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 887777653
|
|
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.68 Score=51.71 Aligned_cols=157 Identities=16% Similarity=0.143 Sum_probs=88.9
Q ss_pred HHHHh----CCCcEEEEEe-cc-cccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHh
Q 003145 356 LQETF----AGRKVMLGVD-RL-DMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI 429 (844)
Q Consensus 356 lr~~~----~~~~vil~Vd-Rl-d~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~I 429 (844)
.|+++ ..+.+.+.-| |- +-..-++-.++|++++.+++|+++ ++.-..+ +.|+.++.+.. ..-
T Consensus 178 ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~----~vlp~~~-----~~~~~~~~~~~---~~~ 245 (381)
T COG0763 178 AREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLK----FVLPLVN-----AKYRRIIEEAL---KWE 245 (381)
T ss_pred HHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCce----EEEecCc-----HHHHHHHHHHh---hcc
Confidence 55555 2344444444 43 444556777889999998999976 4432221 33333333221 110
Q ss_pred hcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCc-----------
Q 003145 430 NGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA----------- 498 (844)
Q Consensus 430 N~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~----------- 498 (844)
.. .+.. .+...+....+.+||+.+..| |.+.+|++.|+ .|.|++--...
T Consensus 246 ~~-------~~~~----~~~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g----~P~Vv~Yk~~~it~~iak~lvk 305 (381)
T COG0763 246 VA-------GLSL----ILIDGEKRKAFAAADAALAAS-----GTATLEAALAG----TPMVVAYKVKPITYFIAKRLVK 305 (381)
T ss_pred cc-------CceE----EecCchHHHHHHHhhHHHHhc-----cHHHHHHHHhC----CCEEEEEeccHHHHHHHHHhcc
Confidence 00 0111 123456778899999999998 78999999996 56666533222
Q ss_pred ------hhhccCCeEEECC------CCHHHHHHHHHHHhcCCH--HHHHHHHHHHHHHHHhc
Q 003145 499 ------AQSLGAGAILVNP------WNITEVANAIARALNMSP--EEREKRHWHNFTHVTTH 546 (844)
Q Consensus 499 ------~~~lg~~g~lvnP------~d~~~~A~ai~~aL~m~~--~er~~r~~~~~~~v~~~ 546 (844)
...+ .+-.+| | ..++.+|.++..++..+. ++..+....++..+++.
T Consensus 306 ~~yisLpNIi-~~~~iv-PEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~~ 365 (381)
T COG0763 306 LPYVSLPNIL-AGREIV-PELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLRED 365 (381)
T ss_pred CCcccchHHh-cCCccc-hHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcCC
Confidence 2222 111111 2 247889999999998762 23334445555555555
|
|
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.055 Score=57.61 Aligned_cols=94 Identities=22% Similarity=0.333 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhHHHHHHhcCC------CCeEEEEEecC-CCC---hhhhh--cCCcc
Q 003145 211 FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNS------DMKVGWFLHTP-FPS---SEIHR--TLPSR 278 (844)
Q Consensus 211 ~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~lr~~~~------~~~i~~flH~P-fp~---~e~~r--~lp~r 278 (844)
..-|.-.+++-++.+...-...|||++||+|-.++|.+||.... ++++.+++|.. |.. .+.+. .+|+.
T Consensus 113 ~~rf~~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~ 192 (245)
T PF08323_consen 113 AERFAFFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDE 192 (245)
T ss_dssp HHHHHHHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGG
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHH
Confidence 34444444544444444212579999999999999999998753 69999999974 221 12221 23321
Q ss_pred --------------HHHHHhhhcCCEEEEecHHHHHHHHH
Q 003145 279 --------------SDLLRAVLAADLVGFHTYDYARHFVS 304 (844)
Q Consensus 279 --------------~~ll~~ll~aDlIgf~t~~~~~~Fl~ 304 (844)
..+-.|+..||.|..-++.|++--++
T Consensus 193 ~~~~~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 193 YFQNLDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp GS-STTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred HhccccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 24566789999999999998876543
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.059 Score=53.98 Aligned_cols=60 Identities=13% Similarity=0.161 Sum_probs=47.1
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCC-hhhHHHhhcccCc
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD-RNVLDKNFQEYNL 662 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~-~~~l~~~~~~l~l 662 (844)
-..+++++|+||||+... ...+.+.+.++|++|.+ .|..++|+|+.+ ...+..+...+++
T Consensus 23 ~~v~~vv~D~Dgtl~~~~-------------~~~~~pgv~e~L~~Lk~-~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPD-------------HNEAYPALRDWIEELKA-AGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CCCCEEEEecCCccccCC-------------CCCcChhHHHHHHHHHH-cCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 467999999999999763 23577899999999987 589999999998 4555555555443
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.043 Score=53.66 Aligned_cols=92 Identities=18% Similarity=0.250 Sum_probs=46.7
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCcc-HHH----HHh-hhcCCEEEEecHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-SDL----LRA-VLAADLVGFHTYDYARHFVS 304 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r-~~l----l~~-ll~aDlIgf~t~~~~~~Fl~ 304 (844)
+.|+|++|.++...+...... +.|+.+++|.+++.........+. ..+ ... .-.+|.+..-+....+.+.+
T Consensus 80 ~~DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~~~~l~~ 156 (177)
T PF13439_consen 80 KPDIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSESTKDELIK 156 (177)
T ss_dssp T-SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHHHHHHHHH
T ss_pred CCCeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECHHHHHHHHH
Confidence 569999999887765544433 889999999987431111111111 111 111 23578877766544444332
Q ss_pred HHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHh
Q 003145 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFI 341 (844)
Q Consensus 305 ~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~ 341 (844)
+|. ...++.++|+|||.+.|+
T Consensus 157 -----~~~-----------~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 157 -----FGI-----------PPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp -----HT-------------SS-EEE----B-CCCH-
T ss_pred -----hCC-----------cccCCEEEECCccHHHcC
Confidence 221 235799999999999884
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.052 Score=57.40 Aligned_cols=71 Identities=10% Similarity=-0.009 Sum_probs=47.7
Q ss_pred ccHHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCcc-----c----------------cccccCCChhHHHHHHHhh
Q 003145 577 LREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQ-----I----------------REMELKLHPDLKQPLNALC 635 (844)
Q Consensus 577 l~~~~~~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~-----~----------------~~~~~~~~~~~~~~L~~L~ 635 (844)
..++++.++....+...|+||+|||+++.....-. +.+ . ......|-+.+++.|+.|.
T Consensus 49 ~~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~-~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~ 127 (237)
T PRK11009 49 VSVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWR-GKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHV 127 (237)
T ss_pred EEHHHhhhhccCCCCcEEEEECcCccccCCchhee-eeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHH
Confidence 46777777664444558999999999974321100 000 0 0123456667999999998
Q ss_pred cCCCCcEEEEcCCC
Q 003145 636 HDPKTTIVVLSGSD 649 (844)
Q Consensus 636 ~d~g~~V~I~SGR~ 649 (844)
+ .|..++++|||+
T Consensus 128 ~-~G~~I~iVTnR~ 140 (237)
T PRK11009 128 K-RGDSIYFITGRT 140 (237)
T ss_pred H-CCCeEEEEeCCC
Confidence 7 599999999996
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=95.07 E-value=2.2 Score=47.14 Aligned_cols=168 Identities=18% Similarity=0.175 Sum_probs=102.2
Q ss_pred EEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEe-cccccCCHHHHHHHHHHHHHhCcCCCCceEEEEE
Q 003145 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVD-RLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQI 404 (844)
Q Consensus 326 ~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~Vd-Rld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i 404 (844)
..+-.+|.-+|+..-.... ......++-+-|| .-|++-+....|+++.+... . ++.++.
T Consensus 160 ~~~lyfPt~m~~~~~~~~~-------------~~~~~~~ltILvGNSgd~sNnHieaL~~L~~~~~--~----~~kIiv- 219 (360)
T PF07429_consen 160 ASLLYFPTRMDPALTLSEK-------------NKKNKGKLTILVGNSGDPSNNHIEALEALKQQFG--D----DVKIIV- 219 (360)
T ss_pred ceEEEcCCCCchhhhcccc-------------ccCCCCceEEEEcCCCCCCccHHHHHHHHHHhcC--C----CeEEEE-
Confidence 3466788878765322110 0111233334444 66888888888777765432 1 233322
Q ss_pred EcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCC-CcCCChhHhhhhhcc
Q 003145 405 AVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-RDGMNLVSYEFVACQ 483 (844)
Q Consensus 405 ~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~-~EG~~Lv~~Eama~~ 483 (844)
|- +-+..++++.++|.+...++ ||.. .+..++..++.+|+.++++.||++++... ..|+|..++ .+.+|
T Consensus 220 --PL-sYg~~n~~Yi~~V~~~~~~l---F~~~---~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~l-Ll~~G 289 (360)
T PF07429_consen 220 --PL-SYGANNQAYIQQVIQAGKEL---FGAE---NFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICL-LLQLG 289 (360)
T ss_pred --EC-CCCCchHHHHHHHHHHHHHh---cCcc---ceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHH-HHHcC
Confidence 21 11112345666776665553 4422 25556889999999999999999999997 599998654 34453
Q ss_pred cCCCceEEEeCCCCchhhccCCeEEE----CCCCHHHHHHHHHHHhcC
Q 003145 484 DLKKGVLILSEFAGAAQSLGAGAILV----NPWNITEVANAIARALNM 527 (844)
Q Consensus 484 ~~~~g~lVlSe~~G~~~~lg~~g~lv----nP~d~~~~A~ai~~aL~m 527 (844)
.++++|+-.-....+.+-++.| +.-|...+++|=+++...
T Consensus 290 ----~~v~L~~~np~~~~l~~~~ipVlf~~d~L~~~~v~ea~rql~~~ 333 (360)
T PF07429_consen 290 ----KKVFLSRDNPFWQDLKEQGIPVLFYGDELDEALVREAQRQLANV 333 (360)
T ss_pred ----CeEEEecCChHHHHHHhCCCeEEeccccCCHHHHHHHHHHHhhC
Confidence 7899999888777773345433 445666666665555443
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.11 Score=56.07 Aligned_cols=65 Identities=8% Similarity=-0.078 Sum_probs=44.9
Q ss_pred eCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cC-cEEEeCC---CC----cchhhhcCCHHHHH
Q 003145 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QF-LIQVGSS---IN----SLSKEKKRKVHQLF 831 (844)
Q Consensus 764 p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~-~Iavgna---~~----~~a~~~l~~~~~v~ 831 (844)
+.+-.+..+++.++++++ ++++.+++||| +.+| +-+ |+ ++.|..+ .+ ..+.+.++++.++.
T Consensus 154 ~~~Kp~p~~~~~~~~~~g------~~~~~~l~IGD-~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~ 226 (272)
T PRK13223 154 PQKKPDPAALLFVMKMAG------VPPSQSLFVGD-SRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALL 226 (272)
T ss_pred CCCCCCcHHHHHHHHHhC------CChhHEEEECC-CHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHH
Confidence 334556788999999998 67899999999 8899 333 43 3444332 11 24556788888887
Q ss_pred HHHH
Q 003145 832 GIFL 835 (844)
Q Consensus 832 ~~l~ 835 (844)
.++.
T Consensus 227 ~~~~ 230 (272)
T PRK13223 227 PGCA 230 (272)
T ss_pred HHHh
Confidence 6543
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.026 Score=56.78 Aligned_cols=52 Identities=10% Similarity=0.116 Sum_probs=38.6
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCCh
Q 003145 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (844)
Q Consensus 592 rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~ 650 (844)
|++|+|.||||+...+.. . ...+..+-|.+.++|++|.+ .|.+++|+|.-+.
T Consensus 2 ~~~~~D~Dgtl~~~~~~~----~--~~~~~~~~pgv~e~L~~Lk~-~G~~l~i~TN~~~ 53 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYV----H--EIDNFEFIDGVIDALRELKK-MGYALVLVTNQSG 53 (176)
T ss_pred CEEEEeCCCCEeCCCCCC----C--CHHHeEECCCHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 789999999999543211 0 01345567889999999987 5999999997753
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.025 Score=51.57 Aligned_cols=50 Identities=14% Similarity=0.243 Sum_probs=36.5
Q ss_pred EEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcc
Q 003145 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (844)
Q Consensus 594 i~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 659 (844)
|+||+||||... ..+-|...++|++|.+ .|..++++|..+...-+.+.+.
T Consensus 1 ~l~D~dGvl~~g---------------~~~ipga~e~l~~L~~-~g~~~~~lTNns~~s~~~~~~~ 50 (101)
T PF13344_consen 1 FLFDLDGVLYNG---------------NEPIPGAVEALDALRE-RGKPVVFLTNNSSRSREEYAKK 50 (101)
T ss_dssp EEEESTTTSEET---------------TEE-TTHHHHHHHHHH-TTSEEEEEES-SSS-HHHHHHH
T ss_pred CEEeCccEeEeC---------------CCcCcCHHHHHHHHHH-cCCCEEEEeCCCCCCHHHHHHH
Confidence 689999999975 2356778999999998 5899999998765554444444
|
... |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.11 Score=54.28 Aligned_cols=59 Identities=10% Similarity=0.087 Sum_probs=41.7
Q ss_pred HHHHHHHHHHhcccCcCCCCCceEEEEeeCCCchhhc----c---CcEEEeCC-C----CcchhhhcCCHHHHHHHHH
Q 003145 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVLLT----Q---FLIQVGSS-I----NSLSKEKKRKVHQLFGIFL 835 (844)
Q Consensus 770 G~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDMf~----g---~~Iavgna-~----~~~a~~~l~~~~~v~~~l~ 835 (844)
-..+..+++.++ .+++.++++|| +.+||.. | .+|..|.. . ...+.+.++++.++..+|.
T Consensus 148 P~~l~~~~~~~~------~~~~~~l~VGD-s~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l~ 218 (220)
T COG0546 148 PEPLLLLLEKLG------LDPEEALMVGD-SLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALLA 218 (220)
T ss_pred HHHHHHHHHHhC------CChhheEEECC-CHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHHHh
Confidence 355667778887 44579999999 9999665 3 44555542 1 2346678999999988774
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.024 Score=54.98 Aligned_cols=49 Identities=16% Similarity=0.152 Sum_probs=43.6
Q ss_pred CCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcchhh
Q 003145 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSLSKE 822 (844)
Q Consensus 767 vnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~a~~ 822 (844)
-+|-.+.+.|+++++ +.++++.++|| |.+| +|+ |+++++.+|.+.+.++
T Consensus 82 ~dK~~a~~~L~~~~~------l~~e~~ayiGD-D~~Dlpvm~~vGls~a~~dAh~~v~~~ 134 (170)
T COG1778 82 SDKLAAFEELLKKLN------LDPEEVAYVGD-DLVDLPVMEKVGLSVAVADAHPLLKQR 134 (170)
T ss_pred HhHHHHHHHHHHHhC------CCHHHhhhhcC-ccccHHHHHHcCCcccccccCHHHHHh
Confidence 489999999999999 78999999999 9999 666 9999999999877644
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=94.48 E-value=4.5 Score=45.73 Aligned_cols=72 Identities=22% Similarity=0.135 Sum_probs=51.4
Q ss_pred EEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhh-c--cCCeEEECCCCHHHH
Q 003145 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS-L--GAGAILVNPWNITEV 517 (844)
Q Consensus 441 v~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~-l--g~~g~lvnP~d~~~~ 517 (844)
+. +.+.++..++.+|++.||+++-.|. |. ..||.+.+ .|+|. . |-.++ + |.+.++| +.|.+++
T Consensus 264 v~-l~~~l~~~~~l~Ll~~a~~vitdSS----gg-i~EA~~lg----~Pvv~--l-~~R~e~~~~g~nvl~v-g~~~~~I 329 (365)
T TIGR03568 264 FR-LFKSLGQERYLSLLKNADAVIGNSS----SG-IIEAPSFG----VPTIN--I-GTRQKGRLRADSVIDV-DPDKEEI 329 (365)
T ss_pred EE-EECCCChHHHHHHHHhCCEEEEcCh----hH-HHhhhhcC----CCEEe--e-cCCchhhhhcCeEEEe-CCCHHHH
Confidence 44 5899999999999999999995542 12 27999985 44442 1 22333 2 4556668 6789999
Q ss_pred HHHHHHHhc
Q 003145 518 ANAIARALN 526 (844)
Q Consensus 518 A~ai~~aL~ 526 (844)
.+++.+++.
T Consensus 330 ~~a~~~~~~ 338 (365)
T TIGR03568 330 VKAIEKLLD 338 (365)
T ss_pred HHHHHHHhC
Confidence 999999654
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=94.45 E-value=0.11 Score=53.29 Aligned_cols=71 Identities=15% Similarity=0.188 Sum_probs=51.5
Q ss_pred cHHHHHHHHHhcCCeEEEEecCCccCCCC----CCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhh
Q 003145 578 READSIERYLRSNNRLLILGFNATLTEPV----DTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 652 (844)
Q Consensus 578 ~~~~~~~~y~~sk~rLi~lD~DGTL~~~~----~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~ 652 (844)
..+.+.+.++....|+|++|+|-||++.. .+|. .........++|+.+..+.+|.+ .|+.|+|+|=.+...
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~---~~~~~~~~~~tpefk~~~~~l~~-~~I~v~VVTfSd~~~ 104 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPD---NDDIRVLTSVTPDFKILGKRLKN-SNIKISVVTFSDKEL 104 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCC---cchhhhhccCCHHHHHHHHHHHH-CCCeEEEEEccchhh
Confidence 45667788899999999999999999821 1110 01111234578999999999987 599999999776544
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.082 Score=55.03 Aligned_cols=60 Identities=12% Similarity=0.028 Sum_probs=40.2
Q ss_pred CCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEE--EeCCC-C----cchhhhcCCHHHHHHHH
Q 003145 766 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQ--VGSSI-N----SLSKEKKRKVHQLFGIF 834 (844)
Q Consensus 766 gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Ia--vgna~-~----~~a~~~l~~~~~v~~~l 834 (844)
+-.|..+++.+++.++ .+.+++||| +.+| |-+ +..+. .|... . ..+.+.+++..++..+|
T Consensus 153 ~~~K~~~i~~~~~~~~--------~~~~i~iGD-s~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~~ 223 (224)
T PLN02954 153 SGGKAEAVQHIKKKHG--------YKTMVMIGD-GATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDLIEVL 223 (224)
T ss_pred CccHHHHHHHHHHHcC--------CCceEEEeC-CHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHHHHhh
Confidence 3468899999888876 368999999 9999 433 34433 34321 1 13556788888887654
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=94.33 E-value=0.11 Score=51.70 Aligned_cols=65 Identities=20% Similarity=0.228 Sum_probs=48.4
Q ss_pred HHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCC-cEEEEcCCC-------hhhHHHhh
Q 003145 586 YLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKT-TIVVLSGSD-------RNVLDKNF 657 (844)
Q Consensus 586 y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~-~V~I~SGR~-------~~~l~~~~ 657 (844)
.+....|.++||.|.||++.. ...++++..+.++++++.-+. .|+|+|-.. ...++..-
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~-------------~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~ 102 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPY-------------EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALE 102 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCC-------------cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHH
Confidence 556789999999999999874 467899999999999975332 599999873 44454444
Q ss_pred cccCce
Q 003145 658 QEYNLW 663 (844)
Q Consensus 658 ~~l~l~ 663 (844)
+.+++.
T Consensus 103 ~~lgIp 108 (168)
T PF09419_consen 103 KALGIP 108 (168)
T ss_pred HhhCCc
Confidence 444543
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=94.28 E-value=0.066 Score=54.04 Aligned_cols=53 Identities=13% Similarity=0.093 Sum_probs=39.6
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCC
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~ 649 (844)
.|+++||.||||...... ..... ....+-+.+.++|++|.+ .|..++|+|+.+
T Consensus 3 ~~~~~~d~~~t~~~~~~~---~~~~~--~~~~~~pgv~e~L~~Lk~-~g~~l~I~Tn~~ 55 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDG---YVKSP--DEWIPIPGSIEAIARLKQ-AGYRVVVATNQS 55 (181)
T ss_pred ccEEEEECCCCcccCCcc---ccCCH--HHeEECCCHHHHHHHHHH-CCCEEEEEeCCc
Confidence 589999999999765321 11222 234567889999999987 589999999876
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.076 Score=58.09 Aligned_cols=67 Identities=19% Similarity=0.192 Sum_probs=49.9
Q ss_pred CCeEEEEecCCccCCCCCC-CCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc
Q 003145 590 NNRLLILGFNATLTEPVDT-PGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~-p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (844)
+.+++++|+||||...... | .+-....+..+.+.+.++|++|.+ .|..++|+|||+....+..+..+
T Consensus 157 ~~~~~~~D~dgtl~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~l~~-~g~~i~i~T~r~~~~~~~~l~~l 224 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGRSP---YDWTKVKEDKPNPMVVELVKMYKA-AGYEIIVVSGRDGVCEEDTVEWL 224 (300)
T ss_pred CCCEEEEECCCcCcCCCCCCc---cchhhcccCCCChhHHHHHHHHHh-CCCEEEEEeCCChhhHHHHHHHH
Confidence 4679999999999975421 0 000001245678899999999987 59999999999998887777665
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.064 Score=53.29 Aligned_cols=54 Identities=15% Similarity=0.181 Sum_probs=38.5
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCC
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR 648 (844)
.|+++||.||||......+ ...+.+ ...++-+.+.++|++|.+ .|.+++|+|..
T Consensus 1 ~~~~~~d~dg~l~~~~~~~--~~~~~~-~~~~~~pgv~e~L~~L~~-~g~~l~IvSN~ 54 (161)
T TIGR01261 1 QKILFIDRDGTLIEEPPSD--FQVDAL-EKLRFEKGVIPALLKLKK-AGYKFVMVTNQ 54 (161)
T ss_pred CCEEEEeCCCCccccCCCc--cccCCH-HHeeECCCHHHHHHHHHH-CCCeEEEEeCC
Confidence 3689999999999853211 111111 234567889999999987 59999999985
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.044 Score=54.34 Aligned_cols=54 Identities=15% Similarity=0.257 Sum_probs=33.1
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCC
Q 003145 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (844)
Q Consensus 592 rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR 648 (844)
|+.+||+||||+.... +..-.+-+..-.-..+.+.++|++|.+ .|..|+|+|--
T Consensus 1 Kia~fD~DgTLi~~~s--~~~f~~~~~D~~~~~~~v~~~L~~l~~-~Gy~IvIvTNQ 54 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKS--GKKFPKDPDDWKFFPPGVPEALRELHK-KGYKIVIVTNQ 54 (159)
T ss_dssp SEEEE-SCTTTEE-ST--STTS-SSTCGGEEC-TTHHHHHHHHHH-TTEEEEEEEE-
T ss_pred CEEEEeCCCCccCCCC--CCcCcCCHHHhhhcchhHHHHHHHHHh-cCCeEEEEeCc
Confidence 6899999999996532 000001111223346679999999987 59999999843
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=94.17 E-value=0.072 Score=56.51 Aligned_cols=56 Identities=18% Similarity=0.306 Sum_probs=43.3
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHH--HhhcccC
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD--KNFQEYN 661 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~--~~~~~l~ 661 (844)
+.++++||+||||... ..+-|.+.++|++|.+ .|..++|+|..+....+ +.+..++
T Consensus 7 ~~~~~~~D~dG~l~~~---------------~~~~pga~e~L~~L~~-~G~~~~ivTN~~~~~~~~~~~L~~~g 64 (242)
T TIGR01459 7 DYDVFLLDLWGVIIDG---------------NHTYPGAVQNLNKIIA-QGKPVYFVSNSPRNIFSLHKTLKSLG 64 (242)
T ss_pred cCCEEEEecccccccC---------------CccCccHHHHHHHHHH-CCCEEEEEeCCCCChHHHHHHHHHCC
Confidence 4678999999999875 2356889999999997 59999999887765433 5555543
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=94.08 E-value=12 Score=41.98 Aligned_cols=243 Identities=15% Similarity=0.102 Sum_probs=120.5
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhh--cCCEEEEecHHHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFVSACTR 308 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll--~aDlIgf~t~~~~~~Fl~~~~~ 308 (844)
.+|+|.||.=-.-.++..+-...-++||++. |---=+.+.. -|.-++..|-+. -||+-.--|..+.++.++
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~~~ipv~Hi-eaGlRs~d~~--~g~~de~~R~~i~~la~lhf~~t~~~~~~L~~---- 139 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFYLNIPVAHI-EAGLRSGDRT--EGMPDEINRHAIDKLAHLHFAPTEEARERLLQ---- 139 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHHTT-EEEEE-S-----S-TT--SSTTHHHHHHHHHHH-SEEEESSHHHHHHHHH----
T ss_pred CCCEEEEEcCCchHHHHHHHHHHhCCCEEEe-cCCCCccccC--CCCchhhhhhhhhhhhhhhccCCHHHHHHHHh----
Confidence 4599999886766666666555668887753 2211111211 233345544433 256666666666666554
Q ss_pred HhCcccCCCceeeCCeEEEEEEE-ecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEeccccc---CCHHHHHHH
Q 003145 309 ILGFEGTPEGVEDQGRLTRVAAF-PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMI---KGIPQKLLA 384 (844)
Q Consensus 309 ~l~~~~~~~~v~~~g~~~~v~v~-P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~---KGi~~~l~A 384 (844)
.|.+ ..+|.++ .+++|.-........+... ...+.....++.+++..=|.... ......+.+
T Consensus 140 -~G~~-----------~~rI~~vG~~~~D~l~~~~~~~~~~~~--~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~ 205 (346)
T PF02350_consen 140 -EGEP-----------PERIFVVGNPGIDALLQNKEEIEEKYK--NSGILQDAPKPYILVTLHPVTNEDNPERLEQILEA 205 (346)
T ss_dssp -TT-------------GGGEEE---HHHHHHHHHHHTTCC-HH--HHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHH
T ss_pred -cCCC-----------CCeEEEEChHHHHHHHHhHHHHhhhhh--hHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHH
Confidence 1221 1233333 4567754332211111110 11221112334444444344333 345677777
Q ss_pred HHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEE
Q 003145 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (844)
Q Consensus 385 f~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v 464 (844)
++.+.+. ++ +.+|...-++ | .....+.+...+++ .+.+ ..+++..++..+++.|+++|
T Consensus 206 l~~L~~~-~~----~~vi~~~hn~----p---~~~~~i~~~l~~~~---------~v~~-~~~l~~~~~l~ll~~a~~vv 263 (346)
T PF02350_consen 206 LKALAER-QN----VPVIFPLHNN----P---RGSDIIIEKLKKYD---------NVRL-IEPLGYEEYLSLLKNADLVV 263 (346)
T ss_dssp HHHHHHH-TT----EEEEEE--S-----H---HHHHHHHHHHTT-T---------TEEE-E----HHHHHHHHHHESEEE
T ss_pred HHHHHhc-CC----CcEEEEecCC----c---hHHHHHHHHhcccC---------CEEE-ECCCCHHHHHHHHhcceEEE
Confidence 7777766 43 3354443211 2 22333333333221 2553 67899999999999999998
Q ss_pred EcCCCcCCChhHh-hhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcC
Q 003145 465 VTSLRDGMNLVSY-EFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNM 527 (844)
Q Consensus 465 ~~S~~EG~~Lv~~-Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m 527 (844)
--|- .+. ||.+++ .|+|.=...|-.++. ....++|. .|.+++.++|.+++..
T Consensus 264 gdSs------GI~eEa~~lg----~P~v~iR~~geRqe~r~~~~nvlv~-~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 264 GDSS------GIQEEAPSLG----KPVVNIRDSGERQEGRERGSNVLVG-TDPEAIIQAIEKALSD 318 (346)
T ss_dssp ESSH------HHHHHGGGGT------EEECSSS-S-HHHHHTTSEEEET-SSHHHHHHHHHHHHH-
T ss_pred EcCc------cHHHHHHHhC----CeEEEecCCCCCHHHHhhcceEEeC-CCHHHHHHHHHHHHhC
Confidence 7763 245 999995 566666666766654 23455675 8999999999999975
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=93.62 E-value=0.24 Score=59.27 Aligned_cols=66 Identities=17% Similarity=0.323 Sum_probs=51.7
Q ss_pred HHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCC-CcEEEEcCCChhhHHHhhcccCc
Q 003145 585 RYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPK-TTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 585 ~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g-~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
.+.....+.+++..||+++..-. ....+-|.+.++|++|.+ .| .+++|+||.+....+...+++++
T Consensus 358 ~~~~~g~~~~~v~~~~~~~g~i~-----------~~d~~~~g~~e~l~~L~~-~g~i~v~ivTgd~~~~a~~i~~~lgi 424 (556)
T TIGR01525 358 EGESQGKTVVFVAVDGELLGVIA-----------LRDQLRPEAKEAIAALKR-AGGIKLVMLTGDNRSAAEAVAAELGI 424 (556)
T ss_pred HHhhCCcEEEEEEECCEEEEEEE-----------ecccchHhHHHHHHHHHH-cCCCeEEEEeCCCHHHHHHHHHHhCC
Confidence 34455678888999998775421 234578899999999987 58 99999999999999888887654
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=93.48 E-value=0.097 Score=55.36 Aligned_cols=50 Identities=16% Similarity=0.225 Sum_probs=41.0
Q ss_pred EEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEc---CCChhhHHHhhcc
Q 003145 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQE 659 (844)
Q Consensus 594 i~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~ 659 (844)
++||+||||.+.. .+-+.+.++|+.|.+ .+.+++++| ||+...+.+.+..
T Consensus 1 ~lfD~DGvL~~~~---------------~~~~~a~e~i~~l~~-~g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWLGH---------------KPIPGAAEALNRLRA-KGKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCcCC---------------ccCcCHHHHHHHHHH-CCCeEEEEECCCCCCHHHHHHHHHH
Confidence 5799999999863 234588999999987 589999998 8999988777766
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=93.43 E-value=0.27 Score=61.82 Aligned_cols=68 Identities=15% Similarity=0.191 Sum_probs=49.4
Q ss_pred HHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC
Q 003145 582 SIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (844)
Q Consensus 582 ~~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (844)
..+.+.....+++++-.||+++..-. ....+-+...++|++|.+ .|.+++++||.+....+...+.++
T Consensus 621 ~~~~~~~~g~~~v~va~~~~~~g~~~-----------l~d~~r~~a~~~i~~L~~-~gi~v~~~Tgd~~~~a~~ia~~lg 688 (834)
T PRK10671 621 EITAQASQGATPVLLAVDGKAAALLA-----------IRDPLRSDSVAALQRLHK-AGYRLVMLTGDNPTTANAIAKEAG 688 (834)
T ss_pred HHHHHHhCCCeEEEEEECCEEEEEEE-----------ccCcchhhHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcC
Confidence 34445556678888888998763211 123356778899999987 599999999999988888777654
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.25 E-value=0.14 Score=57.33 Aligned_cols=55 Identities=18% Similarity=0.199 Sum_probs=40.5
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCC
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR 648 (844)
++|+++||.||||+...... ...+. .....+-|.+.++|.+|.+ .|.+++|+|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~--y~~~~-~~~~~l~pGV~e~L~~Lk~-~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTD--FQVDS-LDKLAFEPGVIPALLKLQK-AGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCcc--ccccC-cccceECcCHHHHHHHHHh-CCCeEEEEECC
Confidence 57899999999999863210 00111 1346778899999999986 69999999984
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=93.19 E-value=0.18 Score=49.32 Aligned_cols=70 Identities=17% Similarity=0.231 Sum_probs=48.8
Q ss_pred CCeEEEEecCCccCCCCC---CCCCCCcc-cc--------ccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhh
Q 003145 590 NNRLLILGFNATLTEPVD---TPGRRGDQ-IR--------EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF 657 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~---~p~~~~~~-~~--------~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~ 657 (844)
+++++++|+||||+.... .+.....+ .. .....+-|.+.+.|..|.+ +..++|+|+.+...++..+
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~--~~~l~I~Ts~~~~~~~~il 78 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASE--LFELVVFTAGLRMYADPVL 78 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHh--ccEEEEEeCCcHHHHHHHH
Confidence 367899999999998632 11000000 00 1223456789999999974 7999999999999998888
Q ss_pred cccC
Q 003145 658 QEYN 661 (844)
Q Consensus 658 ~~l~ 661 (844)
+.++
T Consensus 79 ~~l~ 82 (148)
T smart00577 79 DLLD 82 (148)
T ss_pred HHhC
Confidence 7754
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=93.15 E-value=0.12 Score=49.52 Aligned_cols=84 Identities=18% Similarity=0.108 Sum_probs=43.4
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccH----HHH-HhhhcCCEEEEecHHHHHHHHH
Q 003145 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRS----DLL-RAVLAADLVGFHTYDYARHFVS 304 (844)
Q Consensus 230 ~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~----~ll-~~ll~aDlIgf~t~~~~~~Fl~ 304 (844)
.+.|+|++|+++..+++.++++. .++|+.+.+|..+.... .++.. .+. ..+-.||.|...+....+.+.+
T Consensus 72 ~~~Dvv~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 72 ERPDVVHAHSPTAGLVAALARRR-RGIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp ---SEEEEEHHHHHHHHHHHHHH-HT--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred cCCeEEEecccchhHHHHHHHHc-cCCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 46799999998877778777733 37999999997543221 11212 222 2344689998888776666554
Q ss_pred HHHHHhCcccCCCceeeCCeEEEEEEEecc
Q 003145 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIG 334 (844)
Q Consensus 305 ~~~~~l~~~~~~~~v~~~g~~~~v~v~P~G 334 (844)
.| ....+|.++|+|
T Consensus 147 -----~g-----------~~~~ri~vipnG 160 (160)
T PF13579_consen 147 -----YG-----------VPPDRIHVIPNG 160 (160)
T ss_dssp -----H--------------GGGEEE----
T ss_pred -----hC-----------CCCCcEEEeCcC
Confidence 12 123578889987
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=93.03 E-value=0.098 Score=52.56 Aligned_cols=53 Identities=15% Similarity=0.165 Sum_probs=39.5
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCC
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~ 649 (844)
+..|+|++|.||||....... ......+-|.+.+.|++|.+ .|.+++|+|+.+
T Consensus 2 ~~~~~~~~d~d~~~~~~~~~~-------~~~~~~~~pgv~e~L~~Lk~-~G~~l~I~Tn~~ 54 (173)
T PRK06769 2 TNIQAIFIDRDGTIGGDTTIH-------YPGSFTLFPFTKASLQKLKA-NHIKIFSFTNQP 54 (173)
T ss_pred CCCcEEEEeCCCcccCCCCCC-------CHHHeEECCCHHHHHHHHHH-CCCEEEEEECCc
Confidence 457999999999997652100 00234567899999999987 589999999864
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=92.84 E-value=0.089 Score=54.85 Aligned_cols=62 Identities=11% Similarity=0.019 Sum_probs=37.7
Q ss_pred CCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhccCcEEEeCC-------CCcchhhhcCCHHHHHHHHHHH
Q 003145 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLTQFLIQVGSS-------INSLSKEKKRKVHQLFGIFLRF 837 (844)
Q Consensus 767 vnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~g~~Iavgna-------~~~~a~~~l~~~~~v~~~l~~~ 837 (844)
..|..+++.+ + ..++.+++||| +.+| +.+..++.+... ....+-..+++-.++...|+.+
T Consensus 147 ~~K~~~l~~~----~------~~~~~~i~iGD-s~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~~~f~ei~~~l~~~ 215 (219)
T PRK09552 147 CCKPSLIRKL----S------DTNDFHIVIGD-SITDLEAAKQADKVFARDFLITKCEELGIPYTPFETFHDVQTELKHL 215 (219)
T ss_pred CchHHHHHHh----c------cCCCCEEEEeC-CHHHHHHHHHCCcceeHHHHHHHHHHcCCCccccCCHHHHHHHHHHH
Confidence 4577666543 3 34678999999 9999 444333333321 1122334578888888888776
Q ss_pred hh
Q 003145 838 SY 839 (844)
Q Consensus 838 ~~ 839 (844)
.+
T Consensus 216 ~~ 217 (219)
T PRK09552 216 LE 217 (219)
T ss_pred hc
Confidence 54
|
|
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=92.80 E-value=2.9 Score=47.84 Aligned_cols=137 Identities=18% Similarity=0.214 Sum_probs=79.0
Q ss_pred EEEEec-ccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhc---------ccCC
Q 003145 366 MLGVDR-LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRING---------RFGT 435 (844)
Q Consensus 366 il~VdR-ld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~---------~~g~ 435 (844)
|+.-+| =+-.++++..++|++.+.++ |+ +.++....+. ..++.+++.+.+. .++. .|..
T Consensus 210 lLpGSR~ae~~~~lp~~l~al~~L~~~-~~----~~~v~~~~~~----~~~~~~~~~l~~~--g~~~~~~~~~~~~~~~~ 278 (396)
T TIGR03492 210 LLPGSRPPEAYRNLKLLLRALEALPDS-QP----FVFLAAIVPS----LSLEKLQAILEDL--GWQLEGSSEDQTSLFQK 278 (396)
T ss_pred EECCCCHHHHHccHHHHHHHHHHHhhC-CC----eEEEEEeCCC----CCHHHHHHHHHhc--CceecCCccccchhhcc
Confidence 344557 45667889999999998655 44 4455444332 2233343333211 1110 0000
Q ss_pred CCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCc------hhh---ccCCe
Q 003145 436 LTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA------AQS---LGAGA 506 (844)
Q Consensus 436 ~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~------~~~---lg~~g 506 (844)
..+.++ ....+...+|+.||++|..|= .+..|+++++ .|.|+--+.+- .+. +-..+
T Consensus 279 ---~~~~v~---~~~~~~~~~l~~ADlvI~rSG-----t~T~E~a~lg----~P~Ilip~~~~q~na~~~~~~~~l~g~~ 343 (396)
T TIGR03492 279 ---GTLEVL---LGRGAFAEILHWADLGIAMAG-----TATEQAVGLG----KPVIQLPGKGPQFTYGFAEAQSRLLGGS 343 (396)
T ss_pred ---CceEEE---echHhHHHHHHhCCEEEECcC-----HHHHHHHHhC----CCEEEEeCCCCHHHHHHHHhhHhhcCCE
Confidence 012221 123678999999999999863 5669999996 56666543221 111 10245
Q ss_pred EEECCCCHHHHHHHHHHHhcCC
Q 003145 507 ILVNPWNITEVANAIARALNMS 528 (844)
Q Consensus 507 ~lvnP~d~~~~A~ai~~aL~m~ 528 (844)
+.+...+.+.+++++.++|+++
T Consensus 344 ~~l~~~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 344 VFLASKNPEQAAQVVRQLLADP 365 (396)
T ss_pred EecCCCCHHHHHHHHHHHHcCH
Confidence 5555678899999999999853
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=92.66 E-value=0.19 Score=59.14 Aligned_cols=70 Identities=7% Similarity=0.126 Sum_probs=46.8
Q ss_pred cCCeEEEEecCCccCCCCC-CCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCCh------------hhHHH
Q 003145 589 SNNRLLILGFNATLTEPVD-TPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR------------NVLDK 655 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~-~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~------------~~l~~ 655 (844)
.+.|+++||+||||..... .+ .. ..+..-..+.+.+.++|++|.+ .|..++|+|..+. ..+..
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~--~~-~~~~d~~~l~pgV~e~L~~L~~-~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~ 241 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKV--FP-KGPDDWQIIFPEIPEKLKELEA-DGFKICIFTNQGGIARGKINADDFKAKIEA 241 (526)
T ss_pred ccCcEEEEECCCCccccCCCcc--CC-CCHHHeeecccCHHHHHHHHHH-CCCEEEEEECCcccccCcccHHHHHHHHHH
Confidence 4579999999999996521 00 00 0001112257889999999987 5999999998665 23556
Q ss_pred hhcccCc
Q 003145 656 NFQEYNL 662 (844)
Q Consensus 656 ~~~~l~l 662 (844)
+++.+++
T Consensus 242 iL~~lgi 248 (526)
T TIGR01663 242 IVAKLGV 248 (526)
T ss_pred HHHHcCC
Confidence 6666654
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.63 E-value=0.19 Score=51.53 Aligned_cols=53 Identities=13% Similarity=0.033 Sum_probs=39.6
Q ss_pred CceEEEEeeCCCch--hhc--cCcEEEeCCCCc---chhh-hcCCHHHHHHHHHHHhhccCC
Q 003145 790 IDYVLCIGHFLGKV--LLT--QFLIQVGSSINS---LSKE-KKRKVHQLFGIFLRFSYSGVQ 843 (844)
Q Consensus 790 ~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~---~a~~-~l~~~~~v~~~l~~~~~~~~~ 843 (844)
.+.+++||| +.+| |.+ +.++.++..... .+.+ .++++.++..+|...+.+..+
T Consensus 144 ~~~~v~iGD-s~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~~~~ 204 (205)
T PRK13582 144 GYRVIAAGD-SYNDTTMLGEADAGILFRPPANVIAEFPQFPAVHTYDELLAAIDKASARALS 204 (205)
T ss_pred CCeEEEEeC-CHHHHHHHHhCCCCEEECCCHHHHHhCCcccccCCHHHHHHHHHHHHhhccC
Confidence 468999999 9999 555 778877654221 2233 699999999999998887665
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=92.62 E-value=0.33 Score=49.34 Aligned_cols=41 Identities=20% Similarity=0.438 Sum_probs=34.5
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCC
Q 003145 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSS 815 (844)
Q Consensus 768 nKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna 815 (844)
+|+.+++++++.++ .+++.++++|| +.+| |.+ |.+++++..
T Consensus 147 ~k~~~~~~~~~~~~------~~~~~~i~iGD-s~~D~~~a~~ag~~~a~~~~ 191 (201)
T TIGR01491 147 NKGEAVERLKRELN------PSLTETVAVGD-SKNDLPMFEVADISISLGDE 191 (201)
T ss_pred cHHHHHHHHHHHhC------CCHHHEEEEcC-CHhHHHHHHhcCCeEEECCC
Confidence 48899999999888 67889999999 9999 666 888888663
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=92.50 E-value=0.27 Score=49.48 Aligned_cols=70 Identities=16% Similarity=0.167 Sum_probs=48.9
Q ss_pred CeEEEEecCCccCCCCCC-----CCCCCcccc-------ccccCCChhHHHHHHHhhcCCCCcEEEEcCC-ChhhHHHhh
Q 003145 591 NRLLILGFNATLTEPVDT-----PGRRGDQIR-------EMELKLHPDLKQPLNALCHDPKTTIVVLSGS-DRNVLDKNF 657 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~-----p~~~~~~~~-------~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR-~~~~l~~~~ 657 (844)
.||++||+|+||.+..-. |-...++.. .....+-+.+.++|+.|.+ .|..++|+|+. +...++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~-~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKD-AGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHH-CCCEEEEEeCCCChHHHHHHH
Confidence 489999999999976421 100011111 1234567889999999987 59999999998 788777776
Q ss_pred cccC
Q 003145 658 QEYN 661 (844)
Q Consensus 658 ~~l~ 661 (844)
+.++
T Consensus 81 ~~~~ 84 (174)
T TIGR01685 81 GTFE 84 (174)
T ss_pred HhCC
Confidence 6654
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=92.46 E-value=0.22 Score=51.52 Aligned_cols=62 Identities=13% Similarity=0.039 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCchhhc----cC-cEEEeCC--C-Cc----chhhhcCCHHHHHHHHHH
Q 003145 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVLLT----QF-LIQVGSS--I-NS----LSKEKKRKVHQLFGIFLR 836 (844)
Q Consensus 769 KG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDMf~----g~-~Iavgna--~-~~----~a~~~l~~~~~v~~~l~~ 836 (844)
|...+.+++++++ .+++.+++||| +.+|+.. |+ .|.+..+ . ++ .+.+.++++.++..++.+
T Consensus 140 ~p~~~~~~~~~~~------~~~~~~~~iGD-s~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~i~~ 212 (214)
T PRK13288 140 DPEPVLKALELLG------AKPEEALMVGD-NHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAIVGD 212 (214)
T ss_pred CcHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHHHhh
Confidence 4445667777777 56789999999 8888333 33 2233222 1 12 255678999998887765
Q ss_pred H
Q 003145 837 F 837 (844)
Q Consensus 837 ~ 837 (844)
+
T Consensus 213 ~ 213 (214)
T PRK13288 213 M 213 (214)
T ss_pred c
Confidence 3
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=92.08 E-value=0.16 Score=53.17 Aligned_cols=69 Identities=14% Similarity=0.121 Sum_probs=47.0
Q ss_pred CCeEEEEecCCccCCCCCCCCC--CC------cc----ccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhh---HH
Q 003145 590 NNRLLILGFNATLTEPVDTPGR--RG------DQ----IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV---LD 654 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~--~~------~~----~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~---l~ 654 (844)
++-.++||+|-|+++..+.-.. .+ .. +....+.+-+.++++++.|.+ .|..|+++|||+... ..
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~-~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIE-LGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHH
Confidence 4568999999999975310000 00 00 112456777899999999988 599999999999765 44
Q ss_pred Hhhcc
Q 003145 655 KNFQE 659 (844)
Q Consensus 655 ~~~~~ 659 (844)
+++..
T Consensus 155 ~nL~~ 159 (229)
T TIGR01675 155 DNLIN 159 (229)
T ss_pred HHHHH
Confidence 45544
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=91.98 E-value=0.22 Score=49.53 Aligned_cols=36 Identities=19% Similarity=0.370 Sum_probs=30.6
Q ss_pred eCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc
Q 003145 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT 806 (844)
Q Consensus 764 p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~ 806 (844)
+.+.+|+.+++.+++.++ ++++.++++|| +.+| |++
T Consensus 138 ~~~~~K~~~l~~~~~~~~------~~~~~~~~iGD-s~~D~~~~~ 175 (177)
T TIGR01488 138 PEGECKGKVLKELLEESK------ITLKKIIAVGD-SVNDLPMLK 175 (177)
T ss_pred CCcchHHHHHHHHHHHhC------CCHHHEEEEeC-CHHHHHHHh
Confidence 567899999999998877 67889999999 9999 543
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=91.95 E-value=0.59 Score=55.97 Aligned_cols=63 Identities=21% Similarity=0.338 Sum_probs=49.6
Q ss_pred hcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 588 RSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 588 ~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
....+.+.++.||+++..-. ....+.|.+.++|++|.+ .|.+++|+||......+...+.+++
T Consensus 382 ~~g~~~~~~~~~~~~~g~~~-----------~~d~l~~~a~e~i~~Lk~-~Gi~v~ilSgd~~~~a~~ia~~lgi 444 (562)
T TIGR01511 382 EQGSTSVLVAVNGELAGVFA-----------LEDQLRPEAKEVIQALKR-RGIEPVMLTGDNRKTAKAVAKELGI 444 (562)
T ss_pred hCCCEEEEEEECCEEEEEEE-----------ecccccHHHHHHHHHHHH-cCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 34567889999999875421 134577899999999988 5999999999999988888877654
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=91.95 E-value=0.44 Score=56.78 Aligned_cols=62 Identities=16% Similarity=0.266 Sum_probs=47.2
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCC-cEEEEcCCChhhHHHhhcccCc
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKT-TIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~-~V~I~SGR~~~~l~~~~~~l~l 662 (844)
...+.+++-.||++...-. ....+-+.+.++|++|.+ .|. +++++||.+....+...+++++
T Consensus 340 ~~~~~~~v~~~~~~~g~i~-----------~~d~l~~~~~e~i~~L~~-~Gi~~v~vvTgd~~~~a~~i~~~lgi 402 (536)
T TIGR01512 340 AGKTIVHVARDGTYLGYIL-----------LSDEPRPDAAEAIAELKA-LGIEKVVMLTGDRRAVAERVARELGI 402 (536)
T ss_pred CCCeEEEEEECCEEEEEEE-----------EeccchHHHHHHHHHHHH-cCCCcEEEEcCCCHHHHHHHHHHcCC
Confidence 3446667777887765321 234577899999999987 589 9999999999999888887654
|
. |
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=91.93 E-value=16 Score=41.25 Aligned_cols=91 Identities=20% Similarity=0.186 Sum_probs=58.3
Q ss_pred HHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCch--hh------c-c-CCeEEECCCC--HHHHH
Q 003145 451 PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA--QS------L-G-AGAILVNPWN--ITEVA 518 (844)
Q Consensus 451 ~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~--~~------l-g-~~g~lvnP~d--~~~~A 518 (844)
+++.++|++||+++.=|= ++++.|..|++ .|.|+=-+...+ ++ + . ..|+.+.-.+ .+.++
T Consensus 244 ~dm~~~~~~ADLvIsRaG----a~Ti~E~~a~g----~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~ 315 (357)
T COG0707 244 DDMAALLAAADLVISRAG----ALTIAELLALG----VPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLA 315 (357)
T ss_pred hhHHHHHHhccEEEeCCc----ccHHHHHHHhC----CCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHH
Confidence 569999999999886543 58899999996 566665555552 22 2 1 2466665544 88999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHH
Q 003145 519 NAIARALNMSPEEREKRHWHNFTHVTTHTAQE 550 (844)
Q Consensus 519 ~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 550 (844)
+.|.++++.+ +...+|..+.++........+
T Consensus 316 ~~i~~l~~~~-~~l~~m~~~a~~~~~p~aa~~ 346 (357)
T COG0707 316 ELILRLLSNP-EKLKAMAENAKKLGKPDAAER 346 (357)
T ss_pred HHHHHHhcCH-HHHHHHHHHHHhcCCCCHHHH
Confidence 9999999863 333344344444334333333
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=91.78 E-value=0.3 Score=52.51 Aligned_cols=73 Identities=14% Similarity=0.191 Sum_probs=47.9
Q ss_pred cCCeEEEEecCCccCCCCCCCC-----CCC---ccc----cccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHH--
Q 003145 589 SNNRLLILGFNATLTEPVDTPG-----RRG---DQI----REMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD-- 654 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~-----~~~---~~~----~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~-- 654 (844)
.++..|+||+|+|+++....-+ ..+ ... ......+-|.+.+.|+.|.+ .|..++|+|+|+....+
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~-~G~~v~iVTnR~~~~~~~T 151 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANS-KGVKIFYVSNRSEKEKAAT 151 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHH-CCCeEEEEeCCCcchHHHH
Confidence 4567899999999986542100 000 001 01334566889999999987 59999999999855443
Q ss_pred -HhhcccCc
Q 003145 655 -KNFQEYNL 662 (844)
Q Consensus 655 -~~~~~l~l 662 (844)
.++...++
T Consensus 152 ~~~Lkk~Gi 160 (266)
T TIGR01533 152 LKNLKRFGF 160 (266)
T ss_pred HHHHHHcCc
Confidence 55555444
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=91.47 E-value=0.44 Score=51.22 Aligned_cols=25 Identities=12% Similarity=0.072 Sum_probs=18.3
Q ss_pred HHHHHHhcCCeEEEEecCCccCCCC
Q 003145 582 SIERYLRSNNRLLILGFNATLTEPV 606 (844)
Q Consensus 582 ~~~~y~~sk~rLi~lD~DGTL~~~~ 606 (844)
+...-.....++|+||+||||+++.
T Consensus 15 ~~~~~~~~~~k~vIFDlDGTLvDS~ 39 (260)
T PLN03243 15 LRQHRLGCGWLGVVLEWEGVIVEDD 39 (260)
T ss_pred HHHHHhcCCceEEEEeCCCceeCCc
Confidence 3333334567899999999999873
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=91.29 E-value=21 Score=39.23 Aligned_cols=124 Identities=18% Similarity=0.165 Sum_probs=81.9
Q ss_pred cEEEEEe-cccccCCHHHHHHHHHHHHHhCcCCCCceEEEEE-EcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 003145 364 KVMLGVD-RLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQI-AVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (844)
Q Consensus 364 ~vil~Vd-Rld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i-~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv 441 (844)
++.+-|| .=|++-+..+.|+++.+++.+ ++.++.- +.|+ ++ + ++.++|.+...+ .||.. .+
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~~~------~v~ii~PlsYp~-gn-~---~Yi~~V~~~~~~---lF~~~---~~ 208 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQFGD------NVKIIVPMGYPA-NN-Q---AYIEEVRQAGLA---LFGAE---NF 208 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHhCC------CeEEEEECCcCC-CC-H---HHHHHHHHHHHH---hcCcc---cE
Confidence 4444455 668999999999988777543 2334332 2232 22 3 445666665554 35422 35
Q ss_pred EEeCCCCCHHHHHHHHHhCcEEEEcCC-CcCCChhHhhhhhcccCCCceEEEeCCCCchhhccCCeEEE
Q 003145 442 HHLDRSLDFPALCALYAVTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILV 509 (844)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~v~~S~-~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~lg~~g~lv 509 (844)
..++..++.+|+.++++.||+.++.-- ..|+|..++=. ..| .|+++|+-.-.-..+-+-|+-|
T Consensus 209 ~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi-~~G----~~v~l~r~n~fwqdl~e~gv~V 272 (322)
T PRK02797 209 QILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLI-QLG----KPVVLSRDNPFWQDLTEQGLPV 272 (322)
T ss_pred EehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHH-HCC----CcEEEecCCchHHHHHhCCCeE
Confidence 667899999999999999999998875 69999876643 332 6888887776666663445444
|
|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=91.12 E-value=20 Score=40.60 Aligned_cols=72 Identities=14% Similarity=0.142 Sum_probs=49.0
Q ss_pred eCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCc----hhhc-c-CCeEEECCC--CHH
Q 003145 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA----AQSL-G-AGAILVNPW--NIT 515 (844)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~----~~~l-g-~~g~lvnP~--d~~ 515 (844)
+.+.++..+ ++..||++| .+-|+ -+..|++++| .|+|+.-..+= +..+ . ..|+.+++. +.+
T Consensus 292 ~~~~~p~~~---ll~~~d~~I---~hgG~-~t~~eal~~G----vP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~ 360 (401)
T cd03784 292 VVDFVPHDW---LLPRCAAVV---HHGGA-GTTAAALRAG----VPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAE 360 (401)
T ss_pred EeCCCCHHH---Hhhhhheee---ecCCc-hhHHHHHHcC----CCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHH
Confidence 466777654 578899999 45665 5679999996 66666655441 2222 1 135555554 689
Q ss_pred HHHHHHHHHhc
Q 003145 516 EVANAIARALN 526 (844)
Q Consensus 516 ~~A~ai~~aL~ 526 (844)
++++++.++|+
T Consensus 361 ~l~~al~~~l~ 371 (401)
T cd03784 361 RLAAALRRLLD 371 (401)
T ss_pred HHHHHHHHHhC
Confidence 99999999997
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=90.52 E-value=1 Score=55.71 Aligned_cols=68 Identities=15% Similarity=0.184 Sum_probs=53.5
Q ss_pred HHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 583 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 583 ~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
.+.+.....+.+++-+||+++..-. ....+-++..++|++|.+ .|..++++||........+.+++++
T Consensus 540 ~~~~~~~g~~~v~va~~~~~~g~i~-----------l~d~~r~~a~~~i~~L~~-~gi~~~llTGd~~~~a~~ia~~lgi 607 (741)
T PRK11033 540 INELESAGKTVVLVLRNDDVLGLIA-----------LQDTLRADARQAISELKA-LGIKGVMLTGDNPRAAAAIAGELGI 607 (741)
T ss_pred HHHHHhCCCEEEEEEECCEEEEEEE-----------EecCCchhHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCC
Confidence 3456666778888889998775321 234567899999999988 5999999999999999988888665
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=90.47 E-value=0.21 Score=51.74 Aligned_cols=59 Identities=14% Similarity=-0.007 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHhcccCcCCCC-CceEEEEeeCCCchhhc----cCcE--EEeCCC---Cc----chhhhcCCHHHHHHHH
Q 003145 769 KGAAIDRILAEIVHSKKMKTA-IDYVLCIGHFLGKVLLT----QFLI--QVGSSI---NS----LSKEKKRKVHQLFGIF 834 (844)
Q Consensus 769 KG~al~~Ll~~l~~~~~~~~~-~d~vlaiGD~~~nDMf~----g~~I--avgna~---~~----~a~~~l~~~~~v~~~l 834 (844)
+...+..++++++ .. ++.+++||| +..|+-. |+.+ .+.... +. .+.+.++++.++..++
T Consensus 147 ~p~~~~~a~~~~~------~~~~~~~~~igD-~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~~~ 219 (220)
T TIGR03351 147 APDLILRAMELTG------VQDVQSVAVAGD-TPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADLPALL 219 (220)
T ss_pred CHHHHHHHHHHcC------CCChhHeEEeCC-CHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHHHHhh
Confidence 3445666677776 44 588999999 7788443 5554 332221 11 2344567777665543
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.46 E-value=0.43 Score=49.66 Aligned_cols=53 Identities=13% Similarity=0.025 Sum_probs=31.6
Q ss_pred HHHHHHHHhcccCcCCCCCceEEEEeeCCCchh--hc--cC-cEEEeCCC--C----cchhhhcCCHHHHH
Q 003145 772 AIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVL--LT--QF-LIQVGSSI--N----SLSKEKKRKVHQLF 831 (844)
Q Consensus 772 al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDM--f~--g~-~Iavgna~--~----~~a~~~l~~~~~v~ 831 (844)
.+..+++.++ .+++.+++||| +.+|+ -+ |. .|.+.... + ..+...+.+.+++.
T Consensus 153 ~~~~~~~~~~------~~~~~~~~igD-s~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~ 216 (222)
T PRK10826 153 VYLNCAAKLG------VDPLTCVALED-SFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELT 216 (222)
T ss_pred HHHHHHHHcC------CCHHHeEEEcC-ChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHHh
Confidence 4567778887 67888999999 77882 22 43 23333221 1 13455566666653
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=90.09 E-value=1.2 Score=54.20 Aligned_cols=71 Identities=10% Similarity=0.164 Sum_probs=54.4
Q ss_pred HHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcc
Q 003145 580 ADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (844)
Q Consensus 580 ~~~~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 659 (844)
....+.+.+...+.+++-+|++++.... ..-.+-+++++++++|.+ .|.+++++||..........++
T Consensus 415 ~~~~~~~a~~G~r~l~va~~~~~lG~i~-----------l~D~~Rp~a~eaI~~l~~-~Gi~v~miTGD~~~ta~~iA~~ 482 (675)
T TIGR01497 415 DQAVDQVARQGGTPLVVCEDNRIYGVIY-----------LKDIVKGGIKERFAQLRK-MGIKTIMITGDNRLTAAAIAAE 482 (675)
T ss_pred HHHHHHHHhCCCeEEEEEECCEEEEEEE-----------ecccchhHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHH
Confidence 3445566666778888888888775421 123467899999999988 5999999999999999888887
Q ss_pred cCc
Q 003145 660 YNL 662 (844)
Q Consensus 660 l~l 662 (844)
+++
T Consensus 483 lGI 485 (675)
T TIGR01497 483 AGV 485 (675)
T ss_pred cCC
Confidence 654
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.99 E-value=0.49 Score=49.04 Aligned_cols=60 Identities=10% Similarity=-0.016 Sum_probs=41.6
Q ss_pred HHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cC-cEEEeCCC---C----cchhhhcCCHHHHHHHHHH
Q 003145 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QF-LIQVGSSI---N----SLSKEKKRKVHQLFGIFLR 836 (844)
Q Consensus 770 G~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~-~Iavgna~---~----~~a~~~l~~~~~v~~~l~~ 836 (844)
..++..++++++ .+++.+++||| +.+| +.+ |+ +|.|..+. . ..+.+.++++.++..+|..
T Consensus 152 ~~~~~~~~~~~~------~~~~~~i~igD-~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l~~ 223 (226)
T PRK13222 152 PAPLLLACEKLG------LDPEEMLFVGD-SRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLLGL 223 (226)
T ss_pred hHHHHHHHHHcC------CChhheEEECC-CHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHHHHH
Confidence 557778888887 56789999999 8888 554 43 44554321 1 2355789999999887753
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=89.88 E-value=0.39 Score=50.30 Aligned_cols=62 Identities=6% Similarity=0.017 Sum_probs=40.3
Q ss_pred HHHHHHHHHHhcccCcCCCCCceEEEEeeCCCchhhc----cCc--EEEeCCCC---cchhhhcCCHHHHHHHHHHHh
Q 003145 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVLLT----QFL--IQVGSSIN---SLSKEKKRKVHQLFGIFLRFS 838 (844)
Q Consensus 770 G~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDMf~----g~~--Iavgna~~---~~a~~~l~~~~~v~~~l~~~~ 838 (844)
-....+++++++ .+++.+++||| +.+|+-. |.. +.|.+... +.+.....+.+++..+|..|.
T Consensus 152 p~~~~~~~~~~~------~~p~~~l~igD-s~~di~aA~~aG~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 222 (224)
T PRK14988 152 QRLWQAVAEHTG------LKAERTLFIDD-SEPILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSLM 222 (224)
T ss_pred HHHHHHHHHHcC------CChHHEEEEcC-CHHHHHHHHHcCCeEEEEEeCCCCCccchhccCCCcHHHHHHHhhhhc
Confidence 344566677777 67888999999 8888544 553 44565432 334445677777777776653
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=89.70 E-value=0.45 Score=46.90 Aligned_cols=63 Identities=11% Similarity=0.092 Sum_probs=43.2
Q ss_pred EEEEecCCccCCCCCCCCCCCccccc-cccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhH---HHhhccc
Q 003145 593 LLILGFNATLTEPVDTPGRRGDQIRE-MELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVL---DKNFQEY 660 (844)
Q Consensus 593 Li~lD~DGTL~~~~~~p~~~~~~~~~-~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l---~~~~~~l 660 (844)
++++|+||||+.+.- .++-.+- ......+.+.++.+++++ .|..++-+|+|+.... ..|+...
T Consensus 1 VVvsDIDGTiT~SD~----~G~i~~~~G~d~~h~g~~~l~~~i~~-~GY~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 1 VVVSDIDGTITKSDV----LGHILPILGKDWTHPGAAELYRKIAD-NGYKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred CEEEeccCCcCccch----hhhhhhccCchhhhhcHHHHHHHHHH-CCeEEEEECcCcHHHHHHHHHHHHHH
Confidence 478999999998731 1111110 012567889999999987 5999999999997553 4566554
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=89.65 E-value=0.77 Score=47.67 Aligned_cols=38 Identities=16% Similarity=0.284 Sum_probs=31.4
Q ss_pred CCChhHHHHHH-HhhcCCCCcEEEEcCCChhhHHHhhccc
Q 003145 622 KLHPDLKQPLN-ALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (844)
Q Consensus 622 ~~~~~~~~~L~-~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (844)
.+-|.+.+.|+ .+.+ .|..++|+|+.+...++.+....
T Consensus 94 ~l~pga~e~L~~~l~~-~G~~v~IvSas~~~~~~~ia~~~ 132 (210)
T TIGR01545 94 TAFPLVAERLRQYLES-SDADIWLITGSPQPLVEAVYFDS 132 (210)
T ss_pred CCCccHHHHHHHHHHh-CCCEEEEEcCCcHHHHHHHHHhc
Confidence 45688999995 6775 59999999999999998888653
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=89.52 E-value=0.62 Score=51.66 Aligned_cols=65 Identities=22% Similarity=0.231 Sum_probs=48.2
Q ss_pred CCeEEEEecCCccCCCCC-CCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcc
Q 003145 590 NNRLLILGFNATLTEPVD-TPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~-~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 659 (844)
..|+|++|+|+||...+- +-|..+- ....+.+.+.+.|++|.+ .|+.++|+|..+...+...+..
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i----~~~~~~~~~~e~L~~L~~-~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNL----NLSPLHKTLQEKIKTLKK-QGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCcccc----ccCccHHHHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHh
Confidence 368999999999987530 0000000 012345789999999987 6999999999999999998887
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=89.28 E-value=0.77 Score=45.97 Aligned_cols=30 Identities=20% Similarity=0.279 Sum_probs=23.7
Q ss_pred eCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch
Q 003145 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV 803 (844)
Q Consensus 764 p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD 803 (844)
+.|..|+..++++++.. ++.++++|| +.+|
T Consensus 145 ~~g~~K~~~~~~~~~~~---------~~~~i~iGD-~~~D 174 (188)
T TIGR01489 145 PCGCCKGKVIHKLSEPK---------YQHIIYIGD-GVTD 174 (188)
T ss_pred CCCCCHHHHHHHHHhhc---------CceEEEECC-Ccch
Confidence 45678988888886541 578999999 9888
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=89.21 E-value=10 Score=43.02 Aligned_cols=99 Identities=11% Similarity=0.084 Sum_probs=61.2
Q ss_pred eCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchh----hc-c-CCeEEECC--CCHH
Q 003145 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ----SL-G-AGAILVNP--WNIT 515 (844)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~----~l-g-~~g~lvnP--~d~~ 515 (844)
+.+.+++. .++..||++|.. -|.| +..|++++| .|+|+.-..+--. .+ . ..|..++. .+.+
T Consensus 279 ~~~~~p~~---~ll~~~~~~I~h---gG~~-t~~Eal~~G----~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~~~ 347 (392)
T TIGR01426 279 VRQWVPQL---EILKKADAFITH---GGMN-STMEALFNG----VPMVAVPQGADQPMTARRIAELGLGRHLPPEEVTAE 347 (392)
T ss_pred EeCCCCHH---HHHhhCCEEEEC---CCch-HHHHHHHhC----CCEEecCCcccHHHHHHHHHHCCCEEEeccccCCHH
Confidence 46777765 567899998864 4665 679999996 6776654433221 12 1 23555654 4678
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHh-cCHHHHHHHH
Q 003145 516 EVANAIARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETF 555 (844)
Q Consensus 516 ~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~f 555 (844)
+++++|.++|..+ +.+++.+++.+.+.. ......++.+
T Consensus 348 ~l~~ai~~~l~~~--~~~~~~~~l~~~~~~~~~~~~aa~~i 386 (392)
T TIGR01426 348 KLREAVLAVLSDP--RYAERLRKMRAEIREAGGARRAADEI 386 (392)
T ss_pred HHHHHHHHHhcCH--HHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 9999999999864 344444555444433 3455555433
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=89.06 E-value=0.79 Score=47.56 Aligned_cols=39 Identities=8% Similarity=0.089 Sum_probs=31.4
Q ss_pred cCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc
Q 003145 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (844)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (844)
..+.|.+.+.|+.|.+ .|..++|+||.....++.+++.+
T Consensus 69 ~~l~pg~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~~ 107 (214)
T TIGR03333 69 AEIREGFREFVAFINE-HGIPFYVISGGMDFFVYPLLEGI 107 (214)
T ss_pred CcccccHHHHHHHHHH-CCCeEEEECCCcHHHHHHHHHhh
Confidence 3566778888888877 58999999999888888877764
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=89.04 E-value=0.48 Score=50.76 Aligned_cols=69 Identities=14% Similarity=0.159 Sum_probs=45.0
Q ss_pred CCeEEEEecCCccCCCCCCCCC--CC------cccc-----ccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHh
Q 003145 590 NNRLLILGFNATLTEPVDTPGR--RG------DQIR-----EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 656 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~--~~------~~~~-----~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~ 656 (844)
.+-.++||+|+|+++..+.-.. .+ .... ...+.+-|.+++..+.|.+ .|.+|+++|||+-..-...
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~-~G~kIf~VSgR~e~~r~aT 178 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVS-LGFKIIFLSGRLKDKQAVT 178 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHH-CCCEEEEEeCCchhHHHHH
Confidence 3568999999999954211000 00 0011 2345667789999999987 5999999999986544333
Q ss_pred hcc
Q 003145 657 FQE 659 (844)
Q Consensus 657 ~~~ 659 (844)
...
T Consensus 179 ~~N 181 (275)
T TIGR01680 179 EAN 181 (275)
T ss_pred HHH
Confidence 333
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=89.03 E-value=0.039 Score=58.09 Aligned_cols=85 Identities=8% Similarity=0.096 Sum_probs=52.3
Q ss_pred cCCeEEEEecCCccCCCCCC------------CCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHh
Q 003145 589 SNNRLLILGFNATLTEPVDT------------PGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 656 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~------------p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~ 656 (844)
-++..++||+|+|+++.... |.....-+......+-|.+++.++.+.+ .|..|+++|||+...-...
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~-~G~~V~~iT~R~~~~r~~T 148 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARS-RGVKVFFITGRPESQREAT 148 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHH-TTEEEEEEEEEETTCHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHH-CCCeEEEEecCCchhHHHH
Confidence 45678999999999854211 0000000001223445568899999988 5999999999998765555
Q ss_pred hccc-CceEEeecceEEEe
Q 003145 657 FQEY-NLWLAAENGMFLRC 674 (844)
Q Consensus 657 ~~~l-~l~liaenG~~i~~ 674 (844)
...+ ..|+-.-++.+++.
T Consensus 149 ~~nL~~~G~~~~~~l~lr~ 167 (229)
T PF03767_consen 149 EKNLKKAGFPGWDHLILRP 167 (229)
T ss_dssp HHHHHHHTTSTBSCGEEEE
T ss_pred HHHHHHcCCCccchhcccc
Confidence 5554 23433435666664
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.57 E-value=0.76 Score=48.07 Aligned_cols=40 Identities=23% Similarity=0.263 Sum_probs=31.8
Q ss_pred cCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC
Q 003145 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (844)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (844)
.++-+.+.+.|..|.+ .+..++++|+.+...++..++.++
T Consensus 85 ~~~~pGv~~~l~~L~~-~~i~~avaS~s~~~~~~~~L~~~g 124 (221)
T COG0637 85 LKPIPGVVELLEQLKA-RGIPLAVASSSPRRAAERVLARLG 124 (221)
T ss_pred CCCCccHHHHHHHHHh-cCCcEEEecCChHHHHHHHHHHcc
Confidence 3566778889999987 478999999999888887776653
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.42 E-value=0.52 Score=50.73 Aligned_cols=49 Identities=10% Similarity=0.188 Sum_probs=38.9
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHH
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD 654 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~ 654 (844)
+.+.++||+||||... ..+-|...++|++|.+ .|.+++++|-.+...-+
T Consensus 7 ~y~~~l~DlDGvl~~G---------------~~~ipga~e~l~~L~~-~g~~~iflTNn~~~s~~ 55 (269)
T COG0647 7 KYDGFLFDLDGVLYRG---------------NEAIPGAAEALKRLKA-AGKPVIFLTNNSTRSRE 55 (269)
T ss_pred hcCEEEEcCcCceEeC---------------CccCchHHHHHHHHHH-cCCeEEEEeCCCCCCHH
Confidence 4567999999999965 2355789999999998 59999999876654433
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=87.89 E-value=1 Score=52.77 Aligned_cols=47 Identities=17% Similarity=0.178 Sum_probs=38.0
Q ss_pred CCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc--eEEeecc
Q 003145 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAENG 669 (844)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l--~liaenG 669 (844)
.+.+.+++.|+++.+ .|.+++|+||.+...++...+++++ .+++.++
T Consensus 72 p~~pga~e~L~~lk~-~G~~v~LaTas~~~~a~~i~~~lGlFd~Vigsd~ 120 (479)
T PRK08238 72 PYNEEVLDYLRAERA-AGRKLVLATASDERLAQAVAAHLGLFDGVFASDG 120 (479)
T ss_pred CCChhHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCEEEeCCC
Confidence 356889999999987 6999999999999999988888764 3444443
|
|
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=87.85 E-value=0.95 Score=44.75 Aligned_cols=72 Identities=18% Similarity=0.120 Sum_probs=51.8
Q ss_pred hcCCeEEEEecCCccCCCCCCCCCCCccc---------------------cccccCCChhHHHHHHHhhcCCCCcEEEEc
Q 003145 588 RSNNRLLILGFNATLTEPVDTPGRRGDQI---------------------REMELKLHPDLKQPLNALCHDPKTTIVVLS 646 (844)
Q Consensus 588 ~sk~rLi~lD~DGTL~~~~~~p~~~~~~~---------------------~~~~~~~~~~~~~~L~~L~~d~g~~V~I~S 646 (844)
..++..+++|+|.||+.....|....... .....++-|.+.+.|++|++ +..++|+|
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~--~yel~I~T 80 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASK--LYEMHVYT 80 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHh--hcEEEEEe
Confidence 35677899999999998765542110000 00123356789999999985 69999999
Q ss_pred CCChhhHHHhhcccC
Q 003145 647 GSDRNVLDKNFQEYN 661 (844)
Q Consensus 647 GR~~~~l~~~~~~l~ 661 (844)
..+...+...++.++
T Consensus 81 ~~~~~yA~~vl~~ld 95 (156)
T TIGR02250 81 MGTRAYAQAIAKLID 95 (156)
T ss_pred CCcHHHHHHHHHHhC
Confidence 999999998888773
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=87.81 E-value=1.2 Score=44.71 Aligned_cols=37 Identities=19% Similarity=0.378 Sum_probs=31.0
Q ss_pred hhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 625 PDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 625 ~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
+++.+.|+.+.+ .+..|+|+||-+...++..+..+++
T Consensus 92 ~~~~e~i~~~~~-~~~~v~IvS~~~~~~i~~~~~~~~i 128 (192)
T PF12710_consen 92 PDAMELIRELKD-NGIKVVIVSGSPDEIIEPIAERLGI 128 (192)
T ss_dssp TTHHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTTS
T ss_pred hhHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHcCC
Confidence 567799999877 5999999999999999888876554
|
|
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=87.80 E-value=0.48 Score=46.58 Aligned_cols=67 Identities=18% Similarity=0.265 Sum_probs=43.1
Q ss_pred eEEEEecCCccCCCCCCCCCCCcc-----ccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc
Q 003145 592 RLLILGFNATLTEPVDTPGRRGDQ-----IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (844)
Q Consensus 592 rLi~lD~DGTL~~~~~~p~~~~~~-----~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (844)
|+++||+||||+.....+....+. .......+-|.+.+.|+.|++ ...|+|.|..+...+...+..+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~--~~ev~i~T~~~~~ya~~v~~~l 72 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK--HYEVVIWTSASEEYAEPVLDAL 72 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH--HCEEEEE-SS-HHHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH--hceEEEEEeehhhhhhHHHHhh
Confidence 689999999999765432100000 001122345778899999865 6999999999999988888776
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.70 E-value=15 Score=41.60 Aligned_cols=71 Identities=11% Similarity=0.080 Sum_probs=50.8
Q ss_pred HHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc----c---CCeEE-EC-----C-CCHHHH
Q 003145 452 ALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----G---AGAIL-VN-----P-WNITEV 517 (844)
Q Consensus 452 el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l----g---~~g~l-vn-----P-~d~~~~ 517 (844)
++-.+-|.|.+.|+||.+|..|.++.|.-..| -|-|.+..+|..-.+ . .-|+. |+ | .+++++
T Consensus 493 DYeeFVRGCHLGVFPSYYEPWGYTPAECTVMG----iPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL 568 (692)
T KOG3742|consen 493 DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG----IPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQL 568 (692)
T ss_pred CHHHHhccccccccccccCCCCCCchheEEec----cccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHH
Confidence 34557789999999999999999999998884 566777777765443 1 12544 42 2 356777
Q ss_pred HHHHHHHhc
Q 003145 518 ANAIARALN 526 (844)
Q Consensus 518 A~ai~~aL~ 526 (844)
++-|.+...
T Consensus 569 ~~~m~~F~~ 577 (692)
T KOG3742|consen 569 ASFMYEFCK 577 (692)
T ss_pred HHHHHHHHH
Confidence 777777764
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=87.66 E-value=1.1 Score=50.67 Aligned_cols=38 Identities=18% Similarity=0.271 Sum_probs=27.6
Q ss_pred CChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC
Q 003145 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (844)
Q Consensus 623 ~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (844)
+-+.+.+.|+.|.+ .|..++|+|+.+...++..++.++
T Consensus 217 l~pGa~ElL~~Lk~-~GiklaIaSn~~~~~~~~~L~~lg 254 (381)
T PLN02575 217 LRTGSQEFVNVLMN-YKIPMALVSTRPRKTLENAIGSIG 254 (381)
T ss_pred cCcCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcC
Confidence 34566777777776 478888888888887777777654
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=87.50 E-value=3.8 Score=51.95 Aligned_cols=70 Identities=11% Similarity=0.218 Sum_probs=50.9
Q ss_pred HHHHHHHhcCCeEEEEecCC-----ccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHH
Q 003145 581 DSIERYLRSNNRLLILGFNA-----TLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDK 655 (844)
Q Consensus 581 ~~~~~y~~sk~rLi~lD~DG-----TL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~ 655 (844)
...+.|.....|.+++-+++ |++.... ...++-+.+.++|++|.+ .|.+|+++||-.......
T Consensus 493 ~~~~~~a~~G~rvl~~A~~~~~~~l~~lGli~-----------l~Dp~r~~~~~~i~~l~~-~Gi~v~miTGD~~~tA~~ 560 (884)
T TIGR01522 493 EEAAEMASAGLRVIAFASGPEKGQLTFLGLVG-----------INDPPRPGVKEAVTTLIT-GGVRIIMITGDSQETAVS 560 (884)
T ss_pred HHHHHHHhcCCEEEEEEEEcCCCCeEEEEEEe-----------ccCcchhHHHHHHHHHHH-CCCeEEEECCCCHHHHHH
Confidence 34445666667888887766 3332211 123467899999999987 699999999999999999
Q ss_pred hhcccCc
Q 003145 656 NFQEYNL 662 (844)
Q Consensus 656 ~~~~l~l 662 (844)
..+++++
T Consensus 561 ia~~~Gi 567 (884)
T TIGR01522 561 IARRLGM 567 (884)
T ss_pred HHHHcCC
Confidence 8887653
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=86.92 E-value=3.9 Score=45.63 Aligned_cols=117 Identities=15% Similarity=0.223 Sum_probs=79.6
Q ss_pred EEEeCCCCCHHHHHHHHHhCcEEEEcCC---CcCC---ChhHhhhhhcccCCCceEEEeCCCCchhhccCCeEEECCCCH
Q 003145 441 IHHLDRSLDFPALCALYAVTDVALVTSL---RDGM---NLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNI 514 (844)
Q Consensus 441 v~~~~~~v~~~el~aly~~ADv~v~~S~---~EG~---~Lv~~Eama~~~~~~g~lVlSe~~G~~~~lg~~g~lvnP~d~ 514 (844)
+.++....+....+..++.-|+++.=+. -++. +.-+.|+++|+ |+++.+--.+.-..++.+--++--.|.
T Consensus 239 ~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~----~~liT~~~~~~e~~f~pgk~~iv~~d~ 314 (373)
T COG4641 239 VQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCG----GFLITDYWKDLEKFFKPGKDIIVYQDS 314 (373)
T ss_pred hhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcC----CccccccHHHHHHhcCCchheEEecCH
Confidence 3333333344677777777777775443 2333 88899999996 777766666555555443223335789
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHh
Q 003145 515 TEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELNDT 562 (844)
Q Consensus 515 ~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~~ 562 (844)
.++.+.+..++.-+ +||++..+.+++.| ..|+-..=+..++..+..+
T Consensus 315 kdl~~~~~yll~h~-~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~sI 362 (373)
T COG4641 315 KDLKEKLKYLLNHP-DERKEIAECAYERVLARHTYEERIFKLLNEIASI 362 (373)
T ss_pred HHHHHHHHHHhcCc-chHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHH
Confidence 99999999999875 48888888887776 5577777777777766653
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=86.71 E-value=2 Score=55.11 Aligned_cols=40 Identities=3% Similarity=0.014 Sum_probs=35.3
Q ss_pred cCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC
Q 003145 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (844)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (844)
.++-+++.++|++|.+ .|+.|+++|||....+....++++
T Consensus 567 Dplr~~v~~aI~~l~~-~Gi~v~~~TGd~~~ta~~ia~~~g 606 (997)
T TIGR01106 567 DPPRAAVPDAVGKCRS-AGIKVIMVTGDHPITAKAIAKGVG 606 (997)
T ss_pred CCChHHHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHcC
Confidence 3567899999999998 599999999999999998888754
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=86.28 E-value=1.2 Score=49.29 Aligned_cols=52 Identities=13% Similarity=0.131 Sum_probs=36.9
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCC----CCcEEEEc---CCChhhHHHhh-ccc
Q 003145 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDP----KTTIVVLS---GSDRNVLDKNF-QEY 660 (844)
Q Consensus 593 Li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~----g~~V~I~S---GR~~~~l~~~~-~~l 660 (844)
.|+||+||||.... .+-+...++|+.|.+ . +..++++| |++.....+.+ +.+
T Consensus 2 ~~ifD~DGvL~~g~---------------~~i~ga~eal~~L~~-~~~~~g~~~~flTNn~g~s~~~~~~~l~~~l 61 (321)
T TIGR01456 2 GFAFDIDGVLFRGK---------------KPIAGASDALRRLNR-NQGQLKIPYIFLTNGGGFSERARAEEISSLL 61 (321)
T ss_pred EEEEeCcCceECCc---------------cccHHHHHHHHHHhc-cccccCCCEEEEecCCCCCHHHHHHHHHHHc
Confidence 48999999999762 346889999999987 4 66766665 56666644443 443
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=85.65 E-value=1.1 Score=44.84 Aligned_cols=72 Identities=21% Similarity=0.281 Sum_probs=40.3
Q ss_pred CeEEEEecCCccCCCCC-----CCCCC-Ccc-----ccccccCCChhHHHHHHHhhcCCCCcEEEEcCCC-hhhHHHhhc
Q 003145 591 NRLLILGFNATLTEPVD-----TPGRR-GDQ-----IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD-RNVLDKNFQ 658 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~-----~p~~~-~~~-----~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~-~~~l~~~~~ 658 (844)
.||++||+|+||-+..- .|-.. ... .....-.+-+.+..+|+.|.. .|+.++++|--+ .+...+.++
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~-~gv~lavASRt~~P~~A~~~L~ 81 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKE-RGVKLAVASRTDEPDWARELLK 81 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHH-CT--EEEEE--S-HHHHHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHH-CCCEEEEEECCCChHHHHHHHH
Confidence 58999999999998632 11000 000 112334567889999999998 699999999654 456677777
Q ss_pred ccCce
Q 003145 659 EYNLW 663 (844)
Q Consensus 659 ~l~l~ 663 (844)
.+++.
T Consensus 82 ~l~i~ 86 (169)
T PF12689_consen 82 LLEID 86 (169)
T ss_dssp HTT-C
T ss_pred hcCCC
Confidence 76554
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=84.83 E-value=6.6 Score=42.59 Aligned_cols=97 Identities=13% Similarity=0.081 Sum_probs=60.2
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 003145 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (844)
Q Consensus 362 ~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv 441 (844)
.+++++..|-.|+.+.....++|+..+ .+++ .+..|.++.. +.++ +++++++. +. .+
T Consensus 170 ~~~iLi~~GG~d~~~~~~~~l~~l~~~---~~~~----~i~vv~G~~~---~~~~----~l~~~~~~-~~--------~i 226 (279)
T TIGR03590 170 LRRVLVSFGGADPDNLTLKLLSALAES---QINI----SITLVTGSSN---PNLD----ELKKFAKE-YP--------NI 226 (279)
T ss_pred cCeEEEEeCCcCCcCHHHHHHHHHhcc---ccCc----eEEEEECCCC---cCHH----HHHHHHHh-CC--------CE
Confidence 357999999999988777778887653 2222 2333443332 2222 33333332 11 23
Q ss_pred EEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEe
Q 003145 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS 493 (844)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlS 493 (844)
.. .+ ..+++..++..||+++.+ -|.++.|+++++ .|.|+-
T Consensus 227 ~~-~~--~~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g----~P~i~i 266 (279)
T TIGR03590 227 IL-FI--DVENMAELMNEADLAIGA-----AGSTSWERCCLG----LPSLAI 266 (279)
T ss_pred EE-Ee--CHHHHHHHHHHCCEEEEC-----CchHHHHHHHcC----CCEEEE
Confidence 32 33 336899999999999884 458999999996 455543
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=84.46 E-value=1.4 Score=45.62 Aligned_cols=59 Identities=19% Similarity=0.153 Sum_probs=41.5
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcchhh-----hcCCHHHHHHHHHHHh
Q 003145 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSLSKE-----KKRKVHQLFGIFLRFS 838 (844)
Q Consensus 768 nKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~a~~-----~l~~~~~v~~~l~~~~ 838 (844)
.|...++.+ +..+ ..++++|| +.|| |++ +.+|++.-... +.+. ...++.++.+.|...+
T Consensus 132 ~K~~~l~~l-~~~~---------~~~v~vGD-s~nDl~ml~~Ag~~ia~~ak~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (203)
T TIGR02137 132 PKRQSVIAF-KSLY---------YRVIAAGD-SYNDTTMLSEAHAGILFHAPEN-VIREFPQFPAVHTYEDLKREFLKAS 199 (203)
T ss_pred hHHHHHHHH-HhhC---------CCEEEEeC-CHHHHHHHHhCCCCEEecCCHH-HHHhCCCCCcccCHHHHHHHHHHHH
Confidence 488877776 4433 26899999 9999 887 88999877533 3332 3677888877776553
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=84.46 E-value=1.5 Score=50.00 Aligned_cols=36 Identities=17% Similarity=0.232 Sum_probs=29.9
Q ss_pred CCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhc
Q 003145 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (844)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 658 (844)
.+-+.+.+.|+.|.+ .|.+++|+|+.+...+...+.
T Consensus 93 ~l~pGv~elL~~Lk~-~g~~l~IvTn~~~~~~~~~l~ 128 (382)
T PLN02940 93 KALPGANRLIKHLKS-HGVPMALASNSPRANIEAKIS 128 (382)
T ss_pred CCCcCHHHHHHHHHH-CCCcEEEEeCCcHHHHHHHHH
Confidence 355678889999987 599999999999988877665
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.95 E-value=1.1 Score=45.24 Aligned_cols=51 Identities=16% Similarity=0.244 Sum_probs=38.9
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccc-cccCCChhHHHHHHHhhcCCCCcEEEEcCC
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIRE-MELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~-~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR 648 (844)
.++||+|-||||..+.+. ++++ .+-...+.++++|.+|.+ .|..++|+|--
T Consensus 5 ~k~lflDRDGtin~d~~~------yv~~~~~~~~~~g~i~al~~l~~-~gy~lVvvTNQ 56 (181)
T COG0241 5 QKALFLDRDGTINIDKGD------YVDSLDDFQFIPGVIPALLKLQR-AGYKLVVVTNQ 56 (181)
T ss_pred CcEEEEcCCCceecCCCc------ccCcHHHhccCccHHHHHHHHHh-CCCeEEEEECC
Confidence 689999999999876321 2221 345677889999999987 69999999864
|
|
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=83.82 E-value=27 Score=43.31 Aligned_cols=150 Identities=11% Similarity=0.125 Sum_probs=102.0
Q ss_pred CCcEEEEEecccccCCHHH-HHHHHHHHH--HhCcCCC-CceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCC
Q 003145 362 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFL--EENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (844)
Q Consensus 362 ~~~vil~VdRld~~KGi~~-~l~Af~~ll--~~~P~~~-~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~ 437 (844)
+..+++++-|+..-|-... +|...+++. ..+|+.. ..+++|..|....++.. -+++-+.|.+++.-||..=...+
T Consensus 542 ~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~-aK~iIk~I~~va~~in~Dp~v~~ 620 (815)
T PRK14986 542 KALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYM-AKHIIHLINDVAKVINNDPQIGD 620 (815)
T ss_pred ccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHH-HHHHHHHHHHHHHHhccChhhcC
Confidence 4567888999998888777 777766653 3566421 24677767765555533 34566778888887775322223
Q ss_pred cccEEEeCCCCCHHHHHHHHHhCcEEEEcCC--CcCCChhHhhhhhcccCCCceEEEeCCCCchhhc-----cCCeEEEC
Q 003145 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVN 510 (844)
Q Consensus 438 ~~pv~~~~~~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l-----g~~g~lvn 510 (844)
...|+|+. ..+-+--..++.+|||-..+|+ .|.=|..-+=||.- |++-+|..-|+-.++ +++++++-
T Consensus 621 ~lkVVFle-nY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alN-----GaLtlgtlDG~nvEi~e~vG~eN~~~fG 694 (815)
T PRK14986 621 KLKVVFIP-NYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALN-----GALTIGTLDGANVEMLEHVGEENIFIFG 694 (815)
T ss_pred ceeEEEeC-CCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhc-----CceeeeccCCchhHHHHhcCCCcEEEeC
Confidence 34588755 4455555678999999999998 57777777777764 889999999977655 46788885
Q ss_pred CCCHHHHHH
Q 003145 511 PWNITEVAN 519 (844)
Q Consensus 511 P~d~~~~A~ 519 (844)
.+.+++++
T Consensus 695 -~~~~ev~~ 702 (815)
T PRK14986 695 -NTAEEVEA 702 (815)
T ss_pred -CCHHHHHH
Confidence 45666554
|
|
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=83.47 E-value=4 Score=43.84 Aligned_cols=62 Identities=16% Similarity=0.262 Sum_probs=49.7
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
....+|+||+|.||+.+... ...+.|.+.+.|.+|.+ .|..+++=|--+.+-+...+..+++
T Consensus 120 ~~phVIVfDlD~TLItd~~~-----------v~Ir~~~v~~sL~~Lk~-~g~vLvLWSyG~~eHV~~sl~~~~L 181 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEGD-----------VRIRDPAVYDSLRELKE-QGCVLVLWSYGNREHVRHSLKELKL 181 (297)
T ss_pred CCCcEEEEECCCcccccCCc-----------cccCChHHHHHHHHHHH-cCCEEEEecCCCHHHHHHHHHHhCC
Confidence 34569999999999987531 23457899999999998 5888998888888888888887754
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=83.07 E-value=2.1 Score=42.45 Aligned_cols=69 Identities=14% Similarity=0.208 Sum_probs=47.7
Q ss_pred CeEEEEecCCccCCCCCCCCCC-Cc---cc------cccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc
Q 003145 591 NRLLILGFNATLTEPVDTPGRR-GD---QI------REMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~-~~---~~------~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (844)
++.+++|+|+||+-....|... .+ ++ ...-...-|.+.+.|.+|.+ ...++|.|.-+...++..+..+
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~--~yei~I~Ts~~~~yA~~il~~l 78 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSK--WYELVIFTASLEEYADPVLDIL 78 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHh--cCEEEEEcCCcHHHHHHHHHHH
Confidence 4679999999999765544210 00 00 01112345678999999986 4899999999999888888876
Q ss_pred C
Q 003145 661 N 661 (844)
Q Consensus 661 ~ 661 (844)
+
T Consensus 79 d 79 (162)
T TIGR02251 79 D 79 (162)
T ss_pred C
Confidence 3
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=82.81 E-value=6.7 Score=50.13 Aligned_cols=41 Identities=10% Similarity=0.233 Sum_probs=35.6
Q ss_pred cCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
.++-+++.+++++|.+ .|++|+++||..........+++++
T Consensus 578 Dplr~~~~~aI~~l~~-aGI~v~miTGD~~~tA~~iA~~~GI 618 (941)
T TIGR01517 578 DPLRPGVREAVQECQR-AGITVRMVTGDNIDTAKAIARNCGI 618 (941)
T ss_pred CCCchhHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCC
Confidence 3577899999999987 5999999999999999988887553
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=82.21 E-value=2.5 Score=43.41 Aligned_cols=62 Identities=21% Similarity=0.292 Sum_probs=45.9
Q ss_pred cCCeEEEEecCCccCCCCC-CCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc
Q 003145 589 SNNRLLILGFNATLTEPVD-TPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~-~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (844)
..+|++++|+|+||+.... .+ . .....-|-+.+-|+.+.+ ...|+|-|..+...++..+..+
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~~-----~---~~~~kRP~l~eFL~~~~~--~feIvVwTAa~~~ya~~~l~~l 81 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPAE-----T---GEELMRPYLHEFLTSAYE--DYDIVIWSATSMKWIEIKMTEL 81 (195)
T ss_pred CCCcEEEEeCCCceEcccccCC-----C---ceEEeCCCHHHHHHHHHh--CCEEEEEecCCHHHHHHHHHHh
Confidence 4678999999999996521 11 0 112234678999999886 7999999999988888777654
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=81.15 E-value=59 Score=38.50 Aligned_cols=109 Identities=17% Similarity=0.173 Sum_probs=76.9
Q ss_pred EEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeC
Q 003145 366 MLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD 445 (844)
Q Consensus 366 il~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~ 445 (844)
++|..=-.+.|=.++.+.-.-++|+.-|+- +|++.+.| + ..+....+++++++- |. +...++| .
T Consensus 431 vVf~c~~n~~K~~pev~~~wmqIL~~vP~S----vl~L~~~~---~---~~~~~~~l~~la~~~----Gv-~~eRL~f-~ 494 (620)
T COG3914 431 VVFCCFNNYFKITPEVFALWMQILSAVPNS----VLLLKAGG---D---DAEINARLRDLAERE----GV-DSERLRF-L 494 (620)
T ss_pred EEEEecCCcccCCHHHHHHHHHHHHhCCCc----EEEEecCC---C---cHHHHHHHHHHHHHc----CC-Chhheee-c
Confidence 333333347888999999999999999974 36656543 1 124456666666653 32 2334554 7
Q ss_pred CCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCC
Q 003145 446 RSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA 496 (844)
Q Consensus 446 ~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~ 496 (844)
+..+.++-.+-|+.||+++-|=-+-| ..++.|++.. |++|++-.+
T Consensus 495 p~~~~~~h~a~~~iADlvLDTyPY~g-~TTa~daLwm-----~vPVlT~~G 539 (620)
T COG3914 495 PPAPNEDHRARYGIADLVLDTYPYGG-HTTASDALWM-----GVPVLTRVG 539 (620)
T ss_pred CCCCCHHHHHhhchhheeeecccCCC-ccchHHHHHh-----cCceeeecc
Confidence 78888899999999999998877766 5779999998 677777543
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=81.11 E-value=18 Score=46.89 Aligned_cols=88 Identities=18% Similarity=0.299 Sum_probs=56.4
Q ss_pred cHHHHHHHHHhcCCeEEEEecCCccCCCC-----CCCCCC-Ccccc-----ccccCCChhHHHHHHHhhcCCCCcEEEEc
Q 003145 578 READSIERYLRSNNRLLILGFNATLTEPV-----DTPGRR-GDQIR-----EMELKLHPDLKQPLNALCHDPKTTIVVLS 646 (844)
Q Consensus 578 ~~~~~~~~y~~sk~rLi~lD~DGTL~~~~-----~~p~~~-~~~~~-----~~~~~~~~~~~~~L~~L~~d~g~~V~I~S 646 (844)
+..+..+.|.+...|.|++-|= .|-... +.++.. .+.+. ....++.+++.+++++|.+ .|++|+++|
T Consensus 602 ~~~~~~~~~a~~G~RVLalA~k-~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~-agi~v~miT 679 (1054)
T TIGR01657 602 DYQEVLKSYTREGYRVLALAYK-ELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKR-ASIRTVMIT 679 (1054)
T ss_pred hHHHHHHHHHhcCCEEEEEEEe-ecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHH-CCCeEEEEC
Confidence 5667778888888898888651 111100 000000 00000 1234688899999999987 699999999
Q ss_pred CCChhhHHHhhcccCceEEeecc
Q 003145 647 GSDRNVLDKNFQEYNLWLAAENG 669 (844)
Q Consensus 647 GR~~~~l~~~~~~l~l~liaenG 669 (844)
|..........++++ ++..++
T Consensus 680 GD~~~TA~~iA~~~g--ii~~~~ 700 (1054)
T TIGR01657 680 GDNPLTAVHVARECG--IVNPSN 700 (1054)
T ss_pred CCCHHHHHHHHHHcC--CCCCCc
Confidence 999999988888754 444443
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=81.05 E-value=1.4e+02 Score=36.15 Aligned_cols=66 Identities=21% Similarity=0.236 Sum_probs=43.2
Q ss_pred HHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEe-------------------CCCCchhhc-cCCeE--EE--
Q 003145 454 CALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS-------------------EFAGAAQSL-GAGAI--LV-- 509 (844)
Q Consensus 454 ~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlS-------------------e~~G~~~~l-g~~g~--lv-- 509 (844)
..++++||+++.+| |.+.+|++.++ .|.|+. .+.|....+ |..-+ ++
T Consensus 483 ~~~m~aaD~aLaaS-----GTaTLEaAL~g----~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqg 553 (608)
T PRK01021 483 YELMRECDCALAKC-----GTIVLETALNQ----TPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGG 553 (608)
T ss_pred HHHHHhcCeeeecC-----CHHHHHHHHhC----CCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCC
Confidence 68999999999998 79999999996 555543 233333333 22111 22
Q ss_pred -CCCCHHHHHHHHHHHhcCCH
Q 003145 510 -NPWNITEVANAIARALNMSP 529 (844)
Q Consensus 510 -nP~d~~~~A~ai~~aL~m~~ 529 (844)
+-.+++.+|+++ +.|.+++
T Consensus 554 Q~~~tpe~La~~l-~lL~d~~ 573 (608)
T PRK01021 554 KKDFQPEEVAAAL-DILKTSQ 573 (608)
T ss_pred cccCCHHHHHHHH-HHhcCHH
Confidence 345688899886 7776543
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=80.86 E-value=1.6 Score=44.24 Aligned_cols=36 Identities=14% Similarity=0.057 Sum_probs=22.8
Q ss_pred hhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC
Q 003145 625 PDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (844)
Q Consensus 625 ~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (844)
+.+.+.|+.|.+ .|..++|+||.....++.+++.++
T Consensus 83 ~g~~e~l~~l~~-~g~~~~IvS~~~~~~~~~~l~~~g 118 (201)
T TIGR01491 83 DYAEELVRWLKE-KGLKTAIVSGGIMCLAKKVAEKLN 118 (201)
T ss_pred ccHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHHhC
Confidence 446666666665 366777777776666666665544
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=80.44 E-value=1.1e+02 Score=34.70 Aligned_cols=136 Identities=17% Similarity=0.218 Sum_probs=83.6
Q ss_pred CcEEEEEeccccc-CCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 003145 363 RKVMLGVDRLDMI-KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (844)
Q Consensus 363 ~~vil~VdRld~~-KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv 441 (844)
+.+++..=|-.-. +++...+.|+.++++++|+.. ++ .|.-.. +..++ .+ +.+++.. ..|
T Consensus 205 ~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~----vi---yp~H~~-~~v~e-------~~---~~~L~~~--~~v 264 (383)
T COG0381 205 KYILVTAHRRENVGEPLEEICEALREIAEEYPDVI----VI---YPVHPR-PRVRE-------LV---LKRLKNV--ERV 264 (383)
T ss_pred cEEEEEcchhhcccccHHHHHHHHHHHHHhCCCce----EE---EeCCCC-hhhhH-------HH---HHHhCCC--CcE
Confidence 3455556676655 999999999999999998753 22 232111 22222 21 1122221 124
Q ss_pred EEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCce-EEEeCCCCchhhccC-CeEEECCCCHHHHHH
Q 003145 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV-LILSEFAGAAQSLGA-GAILVNPWNITEVAN 519 (844)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~-lVlSe~~G~~~~lg~-~g~lvnP~d~~~~A~ 519 (844)
+ +..++...+...|...|-+.+--| |=.--||-.-+ .| +++=+.+-=.+.+.. +-++|+ .|.+.+.+
T Consensus 265 ~-li~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg----~Pvl~lR~~TERPE~v~agt~~lvg-~~~~~i~~ 333 (383)
T COG0381 265 K-LIDPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLG----KPVLVLRDTTERPEGVEAGTNILVG-TDEENILD 333 (383)
T ss_pred E-EeCCcchHHHHHHHHhceEEEecC-----CchhhhHHhcC----CcEEeeccCCCCccceecCceEEeC-ccHHHHHH
Confidence 4 567899999999999996655444 23356887764 33 344444444444422 345665 58899999
Q ss_pred HHHHHhcCCH
Q 003145 520 AIARALNMSP 529 (844)
Q Consensus 520 ai~~aL~m~~ 529 (844)
++.++++++.
T Consensus 334 ~~~~ll~~~~ 343 (383)
T COG0381 334 AATELLEDEE 343 (383)
T ss_pred HHHHHhhChH
Confidence 9999998754
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=80.31 E-value=0.98 Score=45.43 Aligned_cols=32 Identities=3% Similarity=-0.143 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCchhhc
Q 003145 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVLLT 806 (844)
Q Consensus 768 nKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDMf~ 806 (844)
-+-..+.+++++++ .+++.+++||| ...|+-.
T Consensus 143 P~p~~~~~~~~~~~------~~~~~~l~igD-s~~di~a 174 (188)
T PRK10725 143 PAPDTFLRCAQLMG------VQPTQCVVFED-ADFGIQA 174 (188)
T ss_pred CChHHHHHHHHHcC------CCHHHeEEEec-cHhhHHH
Confidence 35567889999988 67899999999 8888554
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=80.06 E-value=2.6 Score=43.04 Aligned_cols=13 Identities=15% Similarity=0.383 Sum_probs=11.8
Q ss_pred eEEEEecCCccCC
Q 003145 592 RLLILGFNATLTE 604 (844)
Q Consensus 592 rLi~lD~DGTL~~ 604 (844)
++++||+||||+.
T Consensus 2 ~~v~FD~DGTL~~ 14 (205)
T PRK13582 2 EIVCLDLEGVLVP 14 (205)
T ss_pred eEEEEeCCCCChh
Confidence 7899999999993
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=80.02 E-value=1.2 Score=44.20 Aligned_cols=35 Identities=14% Similarity=0.184 Sum_probs=17.9
Q ss_pred hhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc
Q 003145 625 PDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (844)
Q Consensus 625 ~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (844)
+.+.+.|+.+.+ .|..++|+||.....++.++..+
T Consensus 76 ~g~~~~l~~l~~-~g~~~~ivS~~~~~~i~~~~~~~ 110 (177)
T TIGR01488 76 PGARELISWLKE-RGIDTVIVSGGFDFFVEPVAEKL 110 (177)
T ss_pred cCHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHc
Confidence 344555555544 35555555555555555555443
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 844 | ||||
| 2wtx_A | 474 | Insight Into The Mechanism Of Enzymatic Glycosyltra | 5e-66 | ||
| 1uqu_A | 482 | Trehalose-6-Phosphate From E. Coli Bound With Udp-G | 7e-66 | ||
| 1gz5_A | 456 | Trehalose-6-Phosphate Synthase. Otsa Length = 456 | 4e-64 | ||
| 4f96_B | 497 | Crystal Structure Of Vlde, The Pseudo-Glycosyltrans | 2e-15 | ||
| 3t5t_A | 496 | Vall From Streptomyces Hygroscopicus In Apo Form Le | 2e-15 | ||
| 3t7d_A | 497 | Vall From Streptomyces Hygroscopicus In Complex Wit | 9e-15 |
| >pdb|2WTX|A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase Length = 474 | Back alignment and structure |
|
| >pdb|1UQU|A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. Length = 482 | Back alignment and structure |
|
| >pdb|1GZ5|A Chain A, Trehalose-6-Phosphate Synthase. Otsa Length = 456 | Back alignment and structure |
|
| >pdb|4F96|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase, In Complex With Gdp Length = 497 | Back alignment and structure |
|
| >pdb|3T5T|A Chain A, Vall From Streptomyces Hygroscopicus In Apo Form Length = 496 | Back alignment and structure |
|
| >pdb|3T7D|A Chain A, Vall From Streptomyces Hygroscopicus In Complex With Trehalose Length = 497 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Length = 482 | Back alignment and structure |
|---|
Score = 690 bits (1783), Expect = 0.0
Identities = 160/495 (32%), Positives = 248/495 (50%), Gaps = 22/495 (4%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQK 153
RL+VV+NR+ SAGGL +LG K W GW+G ++ K
Sbjct: 3 RLVVVSNRIAPPDEHAA--------SAGGLAVGILGALKAAGGLWFGWSGETGNEDQPLK 54
Query: 154 ALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAA 213
+ K L E + +YYN + N +LWP FHY RL + + +
Sbjct: 55 KVKKG--NITWASFNLSEQDLDEYYNQFSNAVLWPAFHY-------RLDLVQFQRPAWDG 105
Query: 214 YIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR 273
Y++ N + AD + +D D++W HDYHL+ L++ + ++G+FLH PFP+ EI
Sbjct: 106 YLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFN 165
Query: 274 TLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVED-QGRLTRVAAFP 332
LP+ LL + DL+GF T + F+ + + G+ R +P
Sbjct: 166 ALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYP 225
Query: 333 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN 392
IGI+ + + P+ + +L+ + + V+RLD KG+P++ LA+E LE+
Sbjct: 226 IGIEPKEIAKQAA-GPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKY 284
Query: 393 SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPA 452
GK+ QIA +R DV YQ + Q+ GRING++G L P+++L++ D
Sbjct: 285 PQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKL 344
Query: 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQ-DLKKGVLILSEFAGAAQSLGAGAILVNP 511
L ++ +DV LVT LRDGMNLV+ E+VA Q GVL+LS+FAGAA L A++VNP
Sbjct: 345 LMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT-SALIVNP 403
Query: 512 WNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIK 571
++ EVA A+ RAL MS ER RH + + W E F+S+L V + +
Sbjct: 404 YDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVPRSAESQQ 463
Query: 572 QVPPSLREADSIERY 586
+ + ++E +
Sbjct: 464 RDKVATFPKLALEHH 478
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 3t7d_A* Length = 496 | Back alignment and structure |
|---|
Score = 655 bits (1692), Expect = 0.0
Identities = 107/500 (21%), Positives = 187/500 (37%), Gaps = 28/500 (5%)
Query: 92 SRQRLLVVANRLPVSAIRRGED-SWSLEISAGGLVSALLGV-KEFEARWIGWAGVNV--- 146
+ + + + R ++ ++ GG + + WI A
Sbjct: 1 TGSEIFLASKRAAITYDTDPATGEPRAWLAPGGTGNVVAEQAGVLNISWIASADSEDDRR 60
Query: 147 PDEIGQKALTKALAEKRCIPVFL---DEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLAT 203
+ +T L R I V L D + N N++W +Y + + +
Sbjct: 61 ASALNPDGVTMELHSGREILVRLIRHDPAVFRNVQNFMTANLMWAANNYG-WDRWTQPSF 119
Query: 204 TRSFQSQFAAYIKANQMFADVVNKHY--KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWF 261
+ +A + + + FAD + K V HDY L+ +P L+E D + F
Sbjct: 120 GSDAREGWADFGRFTRDFADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLF 179
Query: 262 LHTPFPSSEIHRTLPS--RSDLLRAVLAADLVGFHTYDYARHFVSACTRILG---FEGTP 316
+H P+PS++ R LP R+ +L +L A +GF + R+F+ + +L +
Sbjct: 180 VHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLPDARIDREA 239
Query: 317 EGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIK 376
VE +G TR+ P+G + ++E G ++++ R D IK
Sbjct: 240 MTVEWRGHRTRLRTMPLGYSPLTLDGR-----NPQLPEGIEEWADGHRLVVHSGRTDPIK 294
Query: 377 GIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTL 436
+ + AF L K +L P R VP +V V N G+
Sbjct: 295 NAERAVRAF--VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGS- 351
Query: 437 TAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA 496
+D D A + D+ + S DG NL ++E + + +ILSE
Sbjct: 352 ---DTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNE-RDADVILSETC 407
Query: 497 GAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV 556
GAA+ LG VNP+++ E A AI+ AL P +R + T + W + +
Sbjct: 408 GAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDAARPWTLEAWVQAQL 467
Query: 557 SELNDTVVEAQLRIKQVPPS 576
L ++ +
Sbjct: 468 DGLAADHAARTATAERFDTA 487
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 Length = 239 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 1e-25
Identities = 24/187 (12%), Positives = 61/187 (32%), Gaps = 18/187 (9%)
Query: 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 652
L+ L ++ TL + P ++ L ++ L + +++G
Sbjct: 3 LIFLDYDGTLVPIIMNP----EESY-----ADAGLLSLISDL--KERFDTYIVTGRSPEE 51
Query: 653 LDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFE 712
+ + F ++ + +G + + + D + + P
Sbjct: 52 ISR-FLPLDINMICYHGACSKINGQIVYNNGSDRF-LGVFDRIYEDTRSWVSDFPGLRIY 109
Query: 713 QRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAA 772
++ +++++ + + + VE G +E+R GV KG+A
Sbjct: 110 RKNLAVLYHLGLMGAD----MKPKLRSRI-EEIARIFGVETYYGKMIIELRVPGVNKGSA 164
Query: 773 IDRILAE 779
I + E
Sbjct: 165 IRSVRGE 171
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 66.4 bits (161), Expect = 3e-11
Identities = 72/484 (14%), Positives = 141/484 (29%), Gaps = 163/484 (33%)
Query: 2 PGNSYNSNSSNIP------PDRVTRLVREKIERDLRKSSRASHPN------DVTDNGGRE 49
S + +SSNI + RL++ K + N +V +
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRLLKSK-----------PYENCLLVLLNVQNAKAWN 260
Query: 50 VFEDEQRL----RDG---DNLGPSI---VDEDLEGPASTPNEGCERLDGRTFSRQRLLVV 99
F ++ R D L + + D TP+E L + L
Sbjct: 261 AFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL------LKYLDCR 314
Query: 100 ANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKAL 159
LP + +S +++ + ++ A W W VN LT +
Sbjct: 315 PQDLPREVLTTN----PRRLS---IIAESI--RDGLATWDNWKHVNC------DKLTTII 359
Query: 160 AEKRCIPVFLDEDIVHQYYNG--------------YCNNILWPLFHYLGLPQEDRLATTR 205
+ + V L+ + ++ ++W + + D
Sbjct: 360 --ESSLNV-LEPAEYRKMFDRLSVFPPSAHIPTILLS--LIW-----FDVIKSD----VM 405
Query: 206 SFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTP 265
++ Y +V K K+ + +L K EY
Sbjct: 406 VVVNKLHKY--------SLVEKQPKES-TISIPSIYLELKVKLENEY------------- 443
Query: 266 FPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDY-----ARHFVSACTRILGFEGTPEGVE 320
+HR++ ++ + + DL+ + Y H +
Sbjct: 444 ----ALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNI--------------- 484
Query: 321 DQGRLTRVAAFP-IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRL-DMIK-- 376
+ R+ F + +D RF+ K ++ A ++ L +
Sbjct: 485 EHPE--RMTLFRMVFLDF-RFLEQ----------KIRHDSTAWNASGSILNTLQQLKFYK 531
Query: 377 -------GIPQKLL-AFEKFL---EENSDWRGKVV-LLQIAVPTRTDVPEYQRLTSQVHE 424
++L+ A FL EEN K LL+IA+ + E + + + H+
Sbjct: 532 PYICDNDPKYERLVNAILDFLPKIEENL-ICSKYTDLLRIAL-----MAEDEAIFEEAHK 585
Query: 425 IVGR 428
V R
Sbjct: 586 QVQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 62.9 bits (152), Expect = 3e-10
Identities = 69/436 (15%), Positives = 131/436 (30%), Gaps = 98/436 (22%)
Query: 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS 501
HH +DF Y D+ V D + +++ QD+ K +L E
Sbjct: 1 HHHHHHMDFETGEHQYQYKDILSV--FEDAF-VDNFDCKDVQDMPKSILSKEEID----- 52
Query: 502 LGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561
I+++ R + Q++ E V +N
Sbjct: 53 ----HIIMSK----------------DAVSGTLRLFWTLLSKQEEMVQKFVEE-VLRINY 91
Query: 562 TVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPG--RRGDQIREM 619
+ + ++ +Q PS+ Y+ +RL +N V R ++
Sbjct: 92 KFLMSPIKTEQRQPSMMT----RMYIEQRDRL----YN---DNQVFAKYNVSRLQPYLKL 140
Query: 620 ELKLHPDLKQPLNALCHDP----KTTIVVLSGSDRNVLDK-NFQEYNLWLAAENGMFLRC 674
L +L+ N L KT + + V K +F+ + WL C
Sbjct: 141 RQALL-ELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIF--WLN-----LKNC 192
Query: 675 TTGKWMTTMPEHL----------NMEWVDSLKHVFEYFTERTPRSHFEQR--ETSL---- 718
+ + + M + L + ++K R + + E L
Sbjct: 193 NSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAE-LRRLLKSKPYENCLLVLL 251
Query: 719 -VWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSK--SVEVRAVGVTKGAAIDR 775
V N K + F + + +L L T + S++ ++ +T
Sbjct: 252 NVQNAKAWNA-FN-LSCK-IL--LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS- 305
Query: 776 ILAEIVHSKK------MKTAIDYVLC-IGHFLGKVLLT-QFLIQVG---------SSINS 818
+L + + + + T L I + L T V SS+N
Sbjct: 306 LLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNV 365
Query: 819 LSKEKKRKVHQLFGIF 834
L + RK+ +F
Sbjct: 366 LEPAEYRKMFDRLSVF 381
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 2e-07
Identities = 48/281 (17%), Positives = 81/281 (28%), Gaps = 47/281 (16%)
Query: 205 RSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHT 264
+ + Y+ N+ + ++ D V HD L ++ Y W H
Sbjct: 102 KLTEEMKELYLNVNRENSKFIDLS--SFDYVLVHDPQPAAL---IEFYEKKSPWLWRCHI 156
Query: 265 PFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGR 324
S L R V D FH +Y + +
Sbjct: 157 DLSS----PNREFWEFLRRFVEKYDRYIFHLPEYVQPELDR------------------- 193
Query: 325 LTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQK 381
+ P ID + Q I + E F + ++ V R D KGI
Sbjct: 194 -NKAVIMPPSIDPLSE---KNVELKQTEILRILERFDVDPEKPIITQVSRFDPWKGIFDV 249
Query: 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441
+ + K E+ + L + D PE + +G + +
Sbjct: 250 IEIYRKVKEKIPGVQ-----LLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGV 304
Query: 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482
H + + A +DV L S+R+G L E +
Sbjct: 305 HARE-------VNAFQRASDVILQMSIREGFGLTVTEAMWK 338
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 48.8 bits (116), Expect = 6e-06
Identities = 49/361 (13%), Positives = 104/361 (28%), Gaps = 53/361 (14%)
Query: 212 AAYIKANQMFADVVNKHYKDGDVV-----------WCHDYHLMFLPKCLKEYNSDMKVGW 260
K D++ +Y DG++V C H + K +SD+
Sbjct: 398 VELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYP---DSDIYWKK 454
Query: 261 FLHTPFPSSEIH--RTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEG 318
S + + +D + ++ G +A T +
Sbjct: 455 LDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGI 514
Query: 319 VEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF----------------AG 362
+ V G D + E E
Sbjct: 515 DVFDPKFNIV---SPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKK 571
Query: 363 RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPT--RTDVPEYQRLTS 420
+ ++ + RLD +K + + + K VV + + E +++
Sbjct: 572 KPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYD 631
Query: 421 QVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT-DVALVTSLRDGMNLVSYEF 479
+ E ++NG+F +++ +DR L T + +L + L E
Sbjct: 632 LIEEY--KLNGQFRWISS----QMDRV-RNGELYRYICDTKGAFVQPALYEAFGLTVVEA 684
Query: 480 VACQDLKKGV-LILSEFAGAAQSLGAG--AILVNPWNITEVANAIARALNMSPEEREKRH 536
+ C G+ + G A+ + G ++P++ + A+ +A E+
Sbjct: 685 MTC-----GLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWD 739
Query: 537 W 537
Sbjct: 740 E 740
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 48.2 bits (114), Expect = 8e-06
Identities = 22/264 (8%), Positives = 59/264 (22%), Gaps = 49/264 (18%)
Query: 295 TYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIK 354
TY Y ++ L + T F I++ +
Sbjct: 189 TYKYRGPQIAVFNSELLKQYFNNKG---YNFTDEYFFQPKINTTLKNYINDKRQ------ 239
Query: 355 ELQETFAGRKVMLGVDRLDMI-KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVP 413
K++L R + + A + F+++ ++
Sbjct: 240 -------KEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKII------------ 280
Query: 414 EYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMN 473
VG + + ++ L L L + + + + +
Sbjct: 281 -----------SVGEKHKDIALGKGIHLNSL-GKLTLEDYADLLKRSSIGISLMISPHPS 328
Query: 474 LVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEE 531
E G+ +++ + + + N +A +
Sbjct: 329 YPPLEMAHF-----GLRVITNKYENKDLSNWHSNIVSLEQLNPENIAETLVELCMS-FNN 382
Query: 532 REKRHWHNFTHVTTHTAQEWAETF 555
R+ + +
Sbjct: 383 RDVDKKESSNMMFYINEFNEFSFI 406
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 6e-05
Identities = 42/213 (19%), Positives = 71/213 (33%), Gaps = 29/213 (13%)
Query: 327 RVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFE 386
R++ G D E + + + + KV+ V RL KG + A
Sbjct: 209 RISVVSPGADVELYSPGNDRATERS--RRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVA 266
Query: 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHE--IVGRINGRFGTLTAVPIHHL 444
+ + D +V+ I E + RI RF +
Sbjct: 267 ALFDRDPDRNLRVI---ICGGPSGPNATPDTYRHMAEELGVEKRI--RF-------LDPR 314
Query: 445 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV-LILSEFAGAAQSLG 503
L A+Y D+ V S + LV+ E A G +I + G ++
Sbjct: 315 PP----SELVAVYRAADIVAVPSFNESFGLVAMEAQAS-----GTPVIAARVGGLPIAVA 365
Query: 504 AG--AILVNPWNITEVANAIARALNMSPEEREK 534
G +LV+ + A+A+A L+ E R +
Sbjct: 366 EGETGLLVDGHSPHAWADALATLLD-DDETRIR 397
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 2e-04
Identities = 58/379 (15%), Positives = 112/379 (29%), Gaps = 58/379 (15%)
Query: 194 GLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDG-----------DVVWCHDYHL 242
LP+E+ + ++ + + F VV HY DG + + H
Sbjct: 93 FLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHS 152
Query: 243 MFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHF 302
+ K K + I + AD + T
Sbjct: 153 LGAQKMEKLNVNTSNFKEMDERFKFHRRII-------AERLTMSYADKIIVSTSQERFGQ 205
Query: 303 VSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG 362
S + + + P G+++ F K L+
Sbjct: 206 YSHDLYRGAVNVEDDD--------KFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDLGS 257
Query: 363 ----RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDV---PEY 415
++ RLD K + A+ + E + L I P E
Sbjct: 258 ERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEE 317
Query: 416 QRLTSQVHEIVGR--INGRFGTLTAVPIHHLDRSLDFPALCALYAVT-DVALVTSLRDGM 472
+ + ++ E++ G+ ++ + + L A A V +TS +
Sbjct: 318 KEILGKIIELIDNNDCRGKV----SMFPLNSQQEL--AGCYAYLASKGSVFALTSFYEPF 371
Query: 473 NLVSYEFVACQDLKKGV-LILSEFAGAAQSLGAG--AILVNPWNITEVANAIARALNMSP 529
L E +A G+ +++ G A+ L G +LV+P + ++A + +A S
Sbjct: 372 GLAPVEAMAS-----GLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFE-SE 425
Query: 530 EERE-------KRHWHNFT 541
E +R +T
Sbjct: 426 ETWSAYQEKGKQRVEERYT 444
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 3e-04
Identities = 38/307 (12%), Positives = 86/307 (28%), Gaps = 53/307 (17%)
Query: 258 VGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTR----ILGFE 313
+ + E L + R A + F + + +
Sbjct: 98 AADVCYAEKVAQE-KGFLYRLTSRYRHYAAFERATFEQGK-STKLMMLTDKQIADFQKHY 155
Query: 314 GTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLD 373
T R P GI +R N +++ ++ + ++L V
Sbjct: 156 QTEPE--------RFQILPPGIYPDRKYSEQIPNSREIYRQKNG-IKEQQNLLLQVGSDF 206
Query: 374 MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHE--IVGRING 431
KG+ + + A E LL + + ++ + + + +
Sbjct: 207 GRKGVDRSIEALASLPESLRHNT----LLFVV-----GQDKPRKFEALAEKLGVRSNV-- 255
Query: 432 RF-GTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV- 489
F V L A D+ L + ++ +V E + G+
Sbjct: 256 HFFSGRNDVS--------------ELMAAADLLLHPAYQEAAGIVLLEAITA-----GLP 296
Query: 490 LILSEFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTH 546
++ + G A + G ++ P++ ++ + +AL R + + T
Sbjct: 297 VLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALT-QSPLRMAWAENARHYADTQ 355
Query: 547 TAQEWAE 553
E
Sbjct: 356 DLYSLPE 362
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 844 | |||
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 100.0 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 100.0 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 99.95 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 99.94 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 99.93 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 99.93 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 99.92 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 99.92 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 99.92 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 99.92 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 99.91 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 99.91 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 99.91 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 99.91 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.91 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.9 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.89 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.88 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.87 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.87 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.87 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.86 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.86 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 99.85 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 99.85 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.85 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 99.85 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 99.85 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.85 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 99.84 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.84 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.83 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 99.83 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.83 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.83 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.83 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.82 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.82 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.81 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 99.81 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.81 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.8 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.8 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.78 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.77 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.76 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.75 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.75 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.69 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.68 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.63 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.62 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.59 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.57 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.42 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.31 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.11 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.02 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.0 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 98.97 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 98.96 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 98.95 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 98.83 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.81 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 98.8 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.74 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 98.74 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.71 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.68 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 98.65 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.62 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.62 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.61 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 98.53 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.52 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 98.46 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 98.45 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 98.44 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 98.43 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 98.42 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 98.41 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.4 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 98.35 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.35 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.34 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 98.27 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.23 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 98.21 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.2 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.16 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 98.15 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.13 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.12 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.11 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.08 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 98.05 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 98.04 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 97.99 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 97.99 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.97 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.97 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.96 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 97.95 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 97.89 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.85 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.84 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 97.8 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 97.76 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.74 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.62 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.58 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.57 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 97.55 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 97.49 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 97.45 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 97.44 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 97.42 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 97.42 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.37 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 97.27 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 97.26 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 97.22 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.18 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 97.15 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 97.13 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 97.08 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 97.06 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.94 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 96.82 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 96.75 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.61 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 96.6 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 96.56 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 96.54 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 96.44 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 96.43 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 96.38 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 96.34 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 96.23 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 96.22 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 96.18 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 96.15 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 96.14 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 96.03 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 95.7 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 95.66 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 95.63 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 95.56 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 95.42 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 95.35 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 95.35 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 95.34 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 95.34 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 95.27 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 95.1 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 94.9 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 94.87 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 94.86 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 94.85 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 94.71 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 94.59 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 94.58 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 94.41 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 94.25 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 94.16 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 94.05 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 94.0 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 93.94 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 93.86 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 93.83 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 93.76 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 93.7 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 93.68 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 93.56 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 93.14 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 92.78 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 92.68 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 92.47 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 92.27 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 92.2 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 92.06 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 91.97 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 91.66 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 91.54 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 91.19 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 91.01 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 90.64 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 90.54 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 90.52 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 90.32 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 90.25 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 90.02 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 89.96 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 89.82 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 89.15 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 88.84 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 88.47 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 88.35 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 88.3 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 88.0 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 87.95 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 87.71 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 87.39 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 86.52 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 86.1 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 86.03 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 85.85 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 85.77 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 85.29 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 85.26 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 84.95 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 84.46 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 84.27 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 83.58 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 82.98 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 82.98 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 82.6 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 82.52 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 81.85 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 81.49 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 81.31 |
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-104 Score=902.99 Aligned_cols=453 Identities=23% Similarity=0.319 Sum_probs=403.8
Q ss_pred CCcEEEEEcCCCcceEec-CCCcE---EEEecCCcHHHhhcccccCCcEEEEeCCCCCCCchhhhHHHH----------h
Q 003145 93 RQRLLVVANRLPVSAIRR-GEDSW---SLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTK----------A 158 (844)
Q Consensus 93 ~~~livvsnrlP~~~~~~-~~~~~---~~~~~~ggl~~~l~~~~~~~~~Wvg~~g~~~~~~~~~~~~~~----------~ 158 (844)
..+|||||||||+.++++ ++|.| .++.++|||++||.++. +|+||||+|...+ .....+ .
T Consensus 2 ~~~livvsnR~P~~~~~~~~~g~~~~~~~~~s~GGLv~al~~~~--~~~Wvgw~~~~~~----~~~~~~~~~~~~~~~~~ 75 (496)
T 3t5t_A 2 GSEIFLASKRAAITYDTDPATGEPRAWLAPGGTGNVVAEQAGVL--NISWIASADSEDD----RRASALNPDGVTMELHS 75 (496)
T ss_dssp --CEEEEESCCCEEEEECTTTCSEEEEECSSHHHHHHHHHHHHH--TCCEEEECCSHHH----HHHHHHCTTCEEEECTT
T ss_pred CCCEEEEECCCCeeEEEecCCCceeeeeeccCCCchHHHHhhhc--CCEEEecCCCccc----hhhhhcccccccccccc
Confidence 368999999999999987 57887 67788999999999987 8999999985321 111111 2
Q ss_pred ccCceEEEEecChHhhhhhhhhhhhhccccccCCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHhhC--CCCCEE
Q 003145 159 LAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHY--KDGDVV 235 (844)
Q Consensus 159 ~~~~~~~pV~l~~~~~~~~Y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~~~~Y~~vN~~fa~~i~~~~--~~~DiV 235 (844)
..+++|+||+|+++++++||+||||++|||+|||+...+.. + ....|+ ++|++|++||++||++|++.+ +++|+|
T Consensus 76 ~~~~~~~~v~l~~~~~~~~Y~gf~n~~LWPl~H~~~~~~~~-p-~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~~D~V 153 (496)
T 3t5t_A 76 GREILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWTQ-P-SFGSDAREGWADFGRFTRDFADAILKSSAQSADPVY 153 (496)
T ss_dssp SCEEEEEEECCCHHHHHHHHHHHSTTTHHHHHTTCCCSSSC-C-CBCHHHHHHHHHHHHHHHHHHHHHHHHTTTCSSCEE
T ss_pred CCCeEEEEEeCCHHHHHHHHHHhHhhhcchhhccccccCCC-C-ccchhhHHHHHHHHHHHHHHHHHHHHHhccCCCCEE
Confidence 46799999999999999999999999999999997322100 0 112344 569999999999999999999 589999
Q ss_pred EEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCC--ccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHh-Cc
Q 003145 236 WCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLP--SRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL-GF 312 (844)
Q Consensus 236 wvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp--~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l-~~ 312 (844)
|||||||++||++||+++|+++||||||||||++|+|++|| ||++|++|||+||+|||||++|++||+++|++++ |.
T Consensus 154 wVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs~e~f~~Lp~~~r~ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~ 233 (496)
T 3t5t_A 154 LVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLPDA 233 (496)
T ss_dssp EEESGGGTTHHHHHHHHCTTSCEEEECCSCCCCHHHHTTSCHHHHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTC
T ss_pred EEeCccHhHHHHHHHhhCCCCeEEEEEcCCCCCHHHHhhCcHhHHHHHHHHHHhCCEEEEecHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999 7999999999999999999999999999999999 87
Q ss_pred cc--CCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHH
Q 003145 313 EG--TPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (844)
Q Consensus 313 ~~--~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~ 390 (844)
+. ....++++|+.++|.++|+|||++.|.+... ++ ..++|++++++++||+|||||+.||+..+|+|| +|++
T Consensus 234 ~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~--~~---~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Af-~ll~ 307 (496)
T 3t5t_A 234 RIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNP--QL---PEGIEEWADGHRLVVHSGRTDPIKNAERAVRAF-VLAA 307 (496)
T ss_dssp EEETTTTEEEETTEEEEEEECCCCBCGGGC----C--CC---CTTHHHHHTTSEEEEEEEESSGGGCHHHHHHHH-HHHH
T ss_pred cccccCCeEEECCEEEEEEEeccEeCHHHhchhhH--HH---HHHHHHHhCCceEEEEcccCccccCHHHHHHHH-HHHH
Confidence 65 3467899999999999999999999987643 11 146788888999999999999999999999999 9999
Q ss_pred hCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCc
Q 003145 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRD 470 (844)
Q Consensus 391 ~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~E 470 (844)
++|+++ +++|+|||.|+++++++|+++++++++++++||++||+. ||+| .+.++.+++.++|++|||||+||++|
T Consensus 308 ~~P~~~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~---~V~f-~g~v~~~el~aly~~ADv~vv~SlrE 382 (496)
T 3t5t_A 308 RGGGLE-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD---TVRI-DNDNDVNHTIACFRRADLLIFNSTVD 382 (496)
T ss_dssp HTSSCT-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT---SEEE-EECCCHHHHHHHHHHCSEEEECCSSB
T ss_pred hCcccc-eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc---CEEE-eCCCCHHHHHHHHHhccEEEECcccc
Confidence 999999 999999999999999999999999999999999999875 7886 57899999999999999999999999
Q ss_pred CCChhHhhhhhcccCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHH
Q 003145 471 GMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQE 550 (844)
Q Consensus 471 G~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 550 (844)
|||||++|||||+ +++||+|+|+++|++++++.+|++|||+|++++|+||.++|+|+++||++|+++++++|++||+++
T Consensus 383 GfgLv~~EamA~~-~~~g~lVlSe~aGa~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~~d~~~ 461 (496)
T 3t5t_A 383 GQNLSTFEAPLVN-ERDADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDAARPWTLEA 461 (496)
T ss_dssp SCCSHHHHHHHHC-SSCCEEEEETTBTTHHHHGGGSEEECTTBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCBHHH
T ss_pred cCChhHHHHHHhC-CCCCCEEEeCCCCCHHHhCCCEEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHH
Confidence 9999999999996 457899999999999999778999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHH
Q 003145 551 WAETFVSELNDTVVE 565 (844)
Q Consensus 551 W~~~fl~~l~~~~~~ 565 (844)
|+++||.+|..+...
T Consensus 462 W~~~fl~~L~~~~~~ 476 (496)
T 3t5t_A 462 WVQAQLDGLAADHAA 476 (496)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcccc
Confidence 999999999887544
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-90 Score=802.06 Aligned_cols=449 Identities=35% Similarity=0.621 Sum_probs=408.2
Q ss_pred CcEEEEEcCCCcceEecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchhhhHHHHhccCceEEEEecChH
Q 003145 94 QRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDED 172 (844)
Q Consensus 94 ~~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~~~~~~~~~~~~~~~~~pV~l~~~ 172 (844)
+||||||||||+.. + .+.++|||++||.++ +..+++||||+|.. ++ +++...+....+++|+||||+++
T Consensus 2 ~~livvsnr~p~~~----~----~~~~~ggl~~~l~~~~~~~~~~wvgw~g~~-~~-~~~~~~~~~~~~~~~~~v~l~~~ 71 (482)
T 1uqt_A 2 SRLVVVSNRIAPPD----E----HAASAGGLAVGILGALKAAGGLWFGWSGET-GN-EDQPLKKVKKGNITWASFNLSEQ 71 (482)
T ss_dssp CCEEEEEEECCCCC------------CCCHHHHHHHHHHHHHCEEEEEEEEEE-SC-CSSCCEEEEETTEEEEEEEECHH
T ss_pred CCEEEEECCCCCCC----C----CCcCCCcHHHHHHHHHhhCCCEEEeCCCCC-Cc-ccchhhhhccCCceEEEEECCHH
Confidence 57999999999972 1 136899999999998 78899999999975 32 21111112347899999999999
Q ss_pred hhhhhhhhhhhhccccccCCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhHHHHHHh
Q 003145 173 IVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE 251 (844)
Q Consensus 173 ~~~~~Y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~lr~ 251 (844)
++++||+||||++|||+|||..... .|+ ..|++|.++|+.||++|.+.++++|+|||||||++++|.++|+
T Consensus 72 ~~~~~y~gf~~~~lWp~~H~~~~~~--------~~~~~~w~~y~~vN~~fa~~l~~~~~~~DiV~vHdyhl~~l~~~lr~ 143 (482)
T 1uqt_A 72 DLDEYYNQFSNAVLWPAFHYRLDLV--------QFQRPAWDGYLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELRK 143 (482)
T ss_dssp HHHHHTTTHHHHTHHHHHTTCGGGC--------CCCHHHHHHHHHHHHHHHHHHGGGCCTTCEEEEESGGGTTHHHHHHH
T ss_pred HHHHHHHHhhhhhccccccCcCCcc--------ccCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEECchHHHHHHHHHH
Confidence 9999999999999999999984222 365 5699999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCC-CceeeCCeEEEEEE
Q 003145 252 YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP-EGVEDQGRLTRVAA 330 (844)
Q Consensus 252 ~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~-~~v~~~g~~~~v~v 330 (844)
+.++++|+||+|+|||++++|+++|++++++++++++|+|+||++.|+++|+++|+++++.+... ..++++|+.++|.+
T Consensus 144 ~~~~~~i~~~~H~pfp~~~~~~~lp~~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~~~~~~~g~~~~v~v 223 (482)
T 1uqt_A 144 RGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEV 223 (482)
T ss_dssp TTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEE
T ss_pred hCCCCcEEEEEcCCCCCHHHHhhCccHHHHHHhhhccCeEEEECHHHHHHHHHHHHHHhCCccccCCeEEECCeEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999886543 44778899999999
Q ss_pred EecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCC
Q 003145 331 FPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT 410 (844)
Q Consensus 331 ~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~ 410 (844)
+|+|||++.|.+....+++.+ ...+|++++++++|++||||++.||+..+|+||++|++++|+++++++|+|||.|+++
T Consensus 224 ip~GID~~~f~~~~~~~~~~~-~~~lr~~~~~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~ 302 (482)
T 1uqt_A 224 YPIGIEPKEIAKQAAGPLPPK-LAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRG 302 (482)
T ss_dssp CCCCCCHHHHHHHHHSCCCHH-HHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCST
T ss_pred EeccCCHHHHHHHhcCcchHH-HHHHHHHhCCCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCcc
Confidence 999999999988665555555 6778899999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhccc-CCCce
Q 003145 411 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD-LKKGV 489 (844)
Q Consensus 411 ~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~-~~~g~ 489 (844)
++++|+++++++++++++||.+||+.+|.||+|+.+.++++++.++|++|||||+||++||||||++||||||. +++||
T Consensus 303 ~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gp 382 (482)
T 1uqt_A 303 DVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGV 382 (482)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCE
T ss_pred chHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999984 55689
Q ss_pred EEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 003145 490 LILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (844)
Q Consensus 490 lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (844)
+|+|+++|+++++ .+|++|||+|++++|++|.++|+|++++|++|++++++++++||++.|+++|++.|+++
T Consensus 383 vV~S~~~G~~~~l-~~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 383 LVLSQFAGAANEL-TSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454 (482)
T ss_dssp EEEETTBGGGGTC-TTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred EEEECCCCCHHHh-CCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 9999999999999 79999999999999999999999999999999999999999999999999999999887
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-26 Score=260.29 Aligned_cols=313 Identities=19% Similarity=0.194 Sum_probs=236.8
Q ss_pred HHHHHHHHHHHHHHHHhh---CCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCCh---hhhh--------cCC
Q 003145 211 FAAYIKANQMFADVVNKH---YKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS---EIHR--------TLP 276 (844)
Q Consensus 211 ~~~Y~~vN~~fa~~i~~~---~~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~---e~~r--------~lp 276 (844)
+..+....+.....+... -...|+|++|+++..+++.++++. .++|+++++|..++.. ..+. ...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~-~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 177 (439)
T 3fro_A 99 IRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKY-FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYP 177 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHH-HCCCEEEEESCCCCCCEEHHHHHHTTCGGGCCSS
T ss_pred hhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhc-cCCCEEEEecccccccCchHHhCccccccccccc
Confidence 444444445555555554 346799999999998888888754 5789999999987641 1111 111
Q ss_pred ccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHH
Q 003145 277 SRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKEL 356 (844)
Q Consensus 277 ~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~l 356 (844)
........+..+|.|.+.+..+.+.... .++.. ..++.++|+|||.+.|.+....+........+
T Consensus 178 ~~~~~~~~~~~ad~ii~~S~~~~~~~~~----~~~~~-----------~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~ 242 (439)
T 3fro_A 178 DIDPEHTGGYIADIVTTVSRGYLIDEWG----FFRNF-----------EGKITYVFNGIDCSFWNESYLTGSRDERKKSL 242 (439)
T ss_dssp EECHHHHHHHHCSEEEESCHHHHHHTHH----HHGGG-----------TTSEEECCCCCCTTTSCGGGSCSCHHHHHHHH
T ss_pred eeeHhhhhhhhccEEEecCHHHHHHHhh----hhhhc-----------CCceeecCCCCCchhcCcccccchhhhhHHHH
Confidence 1123334455799999999877766322 11111 23688999999999998764333334455667
Q ss_pred HHHhC--CCcEEEEEeccc-ccCCHHHHHHHHHHHHHhC--cCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhc
Q 003145 357 QETFA--GRKVMLGVDRLD-MIKGIPQKLLAFEKFLEEN--SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRING 431 (844)
Q Consensus 357 r~~~~--~~~vil~VdRld-~~KGi~~~l~Af~~ll~~~--P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~ 431 (844)
+++++ ++++|+++||+. +.||+..+++|++.+.+++ |+ +.|+++|.+ ++ .+.+.+++++.+.+
T Consensus 243 ~~~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~----~~l~i~G~g-----~~--~~~~~l~~~~~~~~- 310 (439)
T 3fro_A 243 LSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE----MRFIIIGKG-----DP--ELEGWARSLEEKHG- 310 (439)
T ss_dssp HHHHTCCSCEEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGG----EEEEEECCC-----CH--HHHHHHHHHHHHCT-
T ss_pred HHHcCCCCCcEEEEEcccccccccHHHHHHHHHHHHhcccCCC----eEEEEEcCC-----Ch--hHHHHHHHHHhhcC-
Confidence 77773 448999999999 9999999999999998765 55 558888642 21 23455666665543
Q ss_pred ccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc-cCCeEEEC
Q 003145 432 RFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-GAGAILVN 510 (844)
Q Consensus 432 ~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l-g~~g~lvn 510 (844)
.++++.|.++.+++..+|+.||++|+||..||||++++|||||| .|+|+|+.+|..+.+ +.+|++++
T Consensus 311 --------~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G----~Pvi~s~~~~~~e~~~~~~g~~~~ 378 (439)
T 3fro_A 311 --------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG----AIPIASAVGGLRDIITNETGILVK 378 (439)
T ss_dssp --------TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTT----CEEEEESSTHHHHHCCTTTCEEEC
T ss_pred --------CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCC----CCeEEcCCCCcceeEEcCceEEeC
Confidence 25557899999999999999999999999999999999999996 899999999988888 44899999
Q ss_pred CCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhH
Q 003145 511 PWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTV 563 (844)
Q Consensus 511 P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~ 563 (844)
|.|++++|++|.++++++++.+.++.++++++++++++..+++++++.++++.
T Consensus 379 ~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 431 (439)
T 3fro_A 379 AGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSI 431 (439)
T ss_dssp TTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCS
T ss_pred CCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Confidence 99999999999999996566788888889999999999999999999888764
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-25 Score=261.98 Aligned_cols=298 Identities=17% Similarity=0.192 Sum_probs=207.1
Q ss_pred CCCCEEEEeCccchhHHHHHHhcC------CCCeEEEEEecCCCC----hhhhh--cCCc--------------------
Q 003145 230 KDGDVVWCHDYHLMFLPKCLKEYN------SDMKVGWFLHTPFPS----SEIHR--TLPS-------------------- 277 (844)
Q Consensus 230 ~~~DiVwvHDyhl~llp~~lr~~~------~~~~i~~flH~Pfp~----~e~~r--~lp~-------------------- 277 (844)
.++||+++||||-.++|.+++... .+++++|++|..-.. .+.+. .++.
T Consensus 152 ~~ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (536)
T 3vue_A 152 GEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRK 231 (536)
T ss_dssp CSCEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEE
T ss_pred CCCEEEEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccc
Confidence 367899999999999999998754 378999999975211 01110 1111
Q ss_pred cHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcC--------Cch
Q 003145 278 RSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI--------NPV 349 (844)
Q Consensus 278 r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~--------~~~ 349 (844)
-..+-.++..||.|..-++.|++..++. .+. ..++....+..++.+||||||.+.|.+.... ...
T Consensus 232 ~n~~k~~i~~ad~v~tVS~~~a~ei~~~----~~~---g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~ 304 (536)
T 3vue_A 232 INWMKAGILEADRVLTVSPYYAEELISG----IAR---GCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTA 304 (536)
T ss_dssp EEHHHHHHHHCSEEEESCHHHHHHHHTT----CCC---CSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTH
T ss_pred hhHHHHHHHhccEEEEcCHHHhhhhhcc----ccc---ccccccccccCCeEEEECCcchhhcCCCCccccccccchhhh
Confidence 1234567788999999998887764431 110 0111222345578999999999999874211 000
Q ss_pred ---H-HHHHHHHHHh-----CCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHH
Q 003145 350 ---Q-VHIKELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTS 420 (844)
Q Consensus 350 ---~-~~~~~lr~~~-----~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~ 420 (844)
+ .....+++.+ .+.++|++|||+++.||+..+|+|+.+++++++ .|+++|.+ +.. + ..
T Consensus 305 ~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~------~l~l~G~G---~~~-~---~~ 371 (536)
T 3vue_A 305 IEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDV------QIVLLGTG---KKK-F---EK 371 (536)
T ss_dssp HHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSC------EEEEECCB---CHH-H---HH
T ss_pred hhhhHHHHHHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCC------eEEEEecc---Cch-H---HH
Confidence 1 1123344444 367899999999999999999999999876533 36666542 222 2 22
Q ss_pred HHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchh
Q 003145 421 QVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ 500 (844)
Q Consensus 421 ~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~ 500 (844)
.+..+....+. .+.+ .+..+.+++..+|+.||+||+||.+||||++++|||||| .|+|+|+.+|..+
T Consensus 372 ~~~~~~~~~~~--------~v~~-~~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G----~PvI~s~~gG~~e 438 (536)
T 3vue_A 372 LLKSMEEKYPG--------KVRA-VVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYG----TPCACASTGGLVD 438 (536)
T ss_dssp HHHHHHHHSTT--------TEEE-ECSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTT----CCEEECSCTHHHH
T ss_pred HHHHHHhhcCC--------ceEE-EEeccHHHHHHHHHhhheeecccccCCCCHHHHHHHHcC----CCEEEcCCCCchh
Confidence 33334333332 2553 677899999999999999999999999999999999996 8999999999999
Q ss_pred hc--cCCeE----------EECCCCHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 003145 501 SL--GAGAI----------LVNPWNITEVANAIARALNMS-PEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (844)
Q Consensus 501 ~l--g~~g~----------lvnP~d~~~~A~ai~~aL~m~-~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (844)
.+ |.+|+ +|+|.|++++|++|.++|..- .++++++.+++. .+.|+|++-++++++.+...
T Consensus 439 ~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~~~~~~~~~am--~~~fSW~~~A~~y~~ly~~L 511 (536)
T 3vue_A 439 TVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCM--NQDLSWKGPAKNWENVLLGL 511 (536)
T ss_dssp HCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHH--HSCCSSHHHHHHHHHHHHTT
T ss_pred eeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcCcHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHh
Confidence 88 66777 788899999999999998632 223333333322 25689999999998887764
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=99.93 E-value=6.7e-24 Score=244.57 Aligned_cols=300 Identities=18% Similarity=0.147 Sum_probs=211.6
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCCh----hhhhc--CC-------------ccHHHHHhhhcCCEE
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS----EIHRT--LP-------------SRSDLLRAVLAADLV 291 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~----e~~r~--lp-------------~r~~ll~~ll~aDlI 291 (844)
..|+|++|+++..+++.+++.+..++|+++++|..++.. ..+.. ++ ........+..+|.|
T Consensus 129 ~~Divh~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 208 (485)
T 2qzs_A 129 RPDVVHAHDWHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHI 208 (485)
T ss_dssp CCSEEEEETGGGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEE
T ss_pred CCCEEEeeccchhHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeE
Confidence 579999999998888888763456899999999875421 11111 01 011222334568999
Q ss_pred EEecHHHHHHHHHHHHHHhCcccCCCceeeCCeE--EEEEEEecccChhHHhhhhcC-----------CchHHHHHHHHH
Q 003145 292 GFHTYDYARHFVSACTRILGFEGTPEGVEDQGRL--TRVAAFPIGIDSERFIRALEI-----------NPVQVHIKELQE 358 (844)
Q Consensus 292 gf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~--~~v~v~P~GID~~~f~~~~~~-----------~~~~~~~~~lr~ 358 (844)
...+....+.+... .+|.... ..+ ..+. .++.++|+|||.+.|.+.... +........+++
T Consensus 209 i~~S~~~~~~~~~~---~~~~~~~-~~~--~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 282 (485)
T 2qzs_A 209 TAVSPTYAREITEP---QFAYGME-GLL--QQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQI 282 (485)
T ss_dssp EESSHHHHHHTTSH---HHHTTCH-HHH--HHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHH
T ss_pred EecCHHHHHHHhcc---ccCcchH-HHH--HhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHH
Confidence 98887665554321 0110000 000 0011 368899999999988754210 001112345666
Q ss_pred HhC-----CCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhccc
Q 003145 359 TFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRF 433 (844)
Q Consensus 359 ~~~-----~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~ 433 (844)
+++ ++++|+++||+++.||+..+++|++.+.+ + ++.|+++|.+ +. .+++++++++.+.+.
T Consensus 283 ~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~----~~~l~ivG~g-----~~--~~~~~l~~~~~~~~~-- 347 (485)
T 2qzs_A 283 AMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--Q----GGQLALLGAG-----DP--VLQEGFLAAAAEYPG-- 347 (485)
T ss_dssp HHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--T----TCEEEEEEEE-----CH--HHHHHHHHHHHHSTT--
T ss_pred HcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh--C----CcEEEEEeCC-----ch--HHHHHHHHHHHhCCC--
Confidence 663 56899999999999999999999999876 2 3568888752 21 234566666655431
Q ss_pred CCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--c--------
Q 003145 434 GTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G-------- 503 (844)
Q Consensus 434 g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g-------- 503 (844)
.|.++.|. +.+++..+|+.||++|+||..||||++++|||||| .|+|+|+.+|..+.+ |
T Consensus 348 ------~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G----~PvI~s~~gg~~e~v~~~~~~~~~~~ 416 (485)
T 2qzs_A 348 ------QVGVQIGY-HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYG----TLPLVRRTGGLADTVSDCSLENLADG 416 (485)
T ss_dssp ------TEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHT----CEEEEESSHHHHHHCCBCCHHHHHTT
T ss_pred ------cEEEeCCC-CHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHCC----CCEEECCCCCccceeccCcccccccc
Confidence 37656777 88899999999999999999999999999999996 899999999988888 4
Q ss_pred -CCeEEECCCCHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHH
Q 003145 504 -AGAILVNPWNITEVANAIARALN--MSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVV 564 (844)
Q Consensus 504 -~~g~lvnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~ 564 (844)
.+|++++|.|++++|++|.+++. ..++.+.++.+++++ +.++|...++++++.++++..
T Consensus 417 ~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~ly~~~~~ 478 (485)
T 2qzs_A 417 VASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMA--MDFSWQVAAKSYRELYYRLKL 478 (485)
T ss_dssp CCCBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHC-
T ss_pred ccceEEECCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hcCCHHHHHHHHHHHHHHhhh
Confidence 68999999999999999999994 245566666666543 789999999999988877643
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=99.93 E-value=5.6e-25 Score=231.00 Aligned_cols=215 Identities=14% Similarity=0.185 Sum_probs=158.7
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCceEEeecce
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGM 670 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~liaenG~ 670 (844)
.|||++|+||||++....| ....++++++++|++|+++ | .|+|+|||++..+.++++.+ +++|++||+
T Consensus 1 ikli~~DlDGTLl~~~~~~---------~~~~i~~~~~~al~~l~~~-g-~v~iaTGR~~~~~~~~~~~l-~~~I~~nGa 68 (239)
T 1u02_A 1 MSLIFLDYDGTLVPIIMNP---------EESYADAGLLSLISDLKER-F-DTYIVTGRSPEEISRFLPLD-INMICYHGA 68 (239)
T ss_dssp -CEEEEECBTTTBCCCSCG---------GGCCCCHHHHHHHHHHHHH-S-EEEEECSSCHHHHHHHSCSS-CEEEEGGGT
T ss_pred CeEEEEecCCCCcCCCCCc---------ccCCCCHHHHHHHHHHhcC-C-CEEEEeCCCHHHHHHHhccc-hheEEECCE
Confidence 3799999999999864322 2457899999999999984 8 99999999999999999988 899999999
Q ss_pred EEEecCCeeee----cccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHHHHHHHHhcCCC
Q 003145 671 FLRCTTGKWMT----TMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPI 746 (844)
Q Consensus 671 ~i~~~~~~w~~----~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~ 746 (844)
++.. ++.+.. +.....+ .+.+.++++.. .+.++.+++.++..+.++|+..++ +.....+++.+.+ ...
T Consensus 69 ~i~~-~~~~~~~~~~~~~~~l~---~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l-~~~- 140 (239)
T 1u02_A 69 CSKI-NGQIVYNNGSDRFLGVF---DRIYEDTRSWV-SDFPGLRIYRKNLAVLYHLGLMGA-DMKPKLRSRIEEI-ARI- 140 (239)
T ss_dssp EEEE-TTEEEECTTGGGGHHHH---HHHHHHHTTHH-HHSTTCEEEEETTEEEEECTTSCS-TTHHHHHHHHHHH-HHH-
T ss_pred EEee-CCeeeecccccccchhh---HHHHHHHHHHH-hhCCCcEEEecCCEEEEEcCCCCh-hHHHHHHHHHHHH-hcc-
Confidence 9987 444321 1101111 23344554444 335677888888888888876532 1111123333334 221
Q ss_pred CCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc----cCcEEEeCCCCcch
Q 003145 747 SNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT----QFLIQVGSSINSLS 820 (844)
Q Consensus 747 ~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~----g~~Iavgna~~~~a 820 (844)
..+.+.++..++||+|+++|||.|+++|+++++ ++|||| +.|| ||+ +++|+|||| .+.|
T Consensus 141 --~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~g-----------via~GD-~~ND~~Ml~~a~~g~~vam~Na-~~~A 205 (239)
T 1u02_A 141 --FGVETYYGKMIIELRVPGVNKGSAIRSVRGERP-----------AIIAGD-DATDEAAFEANDDALTIKVGEG-ETHA 205 (239)
T ss_dssp --HTCEEEECSSEEEEECTTCCHHHHHHHHHTTSC-----------EEEEES-SHHHHHHHHTTTTSEEEEESSS-CCCC
T ss_pred --CCcEEEeCCcEEEEEcCCCCHHHHHHHHHhhCC-----------eEEEeC-CCccHHHHHHhhCCcEEEECCC-CCcc
Confidence 135567788999999999999999999998742 999999 9999 998 789999999 6788
Q ss_pred hhhcCC---HHHHHHHHHHHhhc
Q 003145 821 KEKKRK---VHQLFGIFLRFSYS 840 (844)
Q Consensus 821 ~~~l~~---~~~v~~~l~~~~~~ 840 (844)
++...+ .+.|..+|+++...
T Consensus 206 ~~v~~~~~~~~gV~~~l~~~~~~ 228 (239)
T 1u02_A 206 KFHVADYIEMRKILKFIEMLGVQ 228 (239)
T ss_dssp SEEESSHHHHHHHHHHHHHHHHH
T ss_pred eEEeCCCCCHHHHHHHHHHHHHh
Confidence 988888 77788888877543
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-24 Score=250.69 Aligned_cols=305 Identities=16% Similarity=0.089 Sum_probs=214.8
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhh-hhcC----C---------ccHHH-HHhhhcCCEEEEec
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI-HRTL----P---------SRSDL-LRAVLAADLVGFHT 295 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~-~r~l----p---------~r~~l-l~~ll~aDlIgf~t 295 (844)
+.|+|++|+++..+++.++.+. .++|+++++|..++.... +... | .+..+ ...+-.+|.|.+.+
T Consensus 120 ~~Divh~~~~~~~~~~~~~~~~-~~~p~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S 198 (499)
T 2r60_A 120 FPQVVTTHYGDGGLAGVLLKNI-KGLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVST 198 (499)
T ss_dssp CCSEEEEEHHHHHHHHHHHHHH-HCCCEEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESS
T ss_pred CCCEEEEcCCcchHHHHHHHHh-cCCcEEEEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECC
Confidence 5699999998766666666544 368899999986542110 0000 0 00111 12234688888887
Q ss_pred HHHHHHHHHHHHHHhC-cccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhC--------CCcEE
Q 003145 296 YDYARHFVSACTRILG-FEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA--------GRKVM 366 (844)
Q Consensus 296 ~~~~~~Fl~~~~~~l~-~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~--------~~~vi 366 (844)
....+.+... ..+| ... .....++.++|+|||.+.|.+... .+....++++++ ++++|
T Consensus 199 ~~~~~~~~~~--~~~g~~~~-------~~~~~ki~vi~ngvd~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~i 265 (499)
T 2r60_A 199 SQERFGQYSH--DLYRGAVN-------VEDDDKFSVIPPGVNTRVFDGEYG----DKIKAKITKYLERDLGSERMELPAI 265 (499)
T ss_dssp HHHHHHTTTS--GGGTTTCC-------TTCGGGEEECCCCBCTTTSSSCCC----HHHHHHHHHHHHHHSCGGGTTSCEE
T ss_pred HHHHHHHHhh--hccccccc-------ccCCCCeEEECCCcChhhcCccch----hhhHHHHHHHhcccccccCCCCcEE
Confidence 6544443210 0011 100 002346889999999988865311 122234555543 67899
Q ss_pred EEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCC----h---HHHHHHHHHHHHHHHHhhcccCCCCcc
Q 003145 367 LGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTD----V---PEYQRLTSQVHEIVGRINGRFGTLTAV 439 (844)
Q Consensus 367 l~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~----~---~~~~~l~~~l~~lv~~IN~~~g~~~~~ 439 (844)
+++||+.+.||+..+++|+..+.+++|+. +.|+++|... +. . .+..++.+++++++.+.+.. .
T Consensus 266 ~~vGrl~~~Kg~~~li~a~~~l~~~~~~~---~~l~i~G~~~-~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~------~ 335 (499)
T 2r60_A 266 IASSRLDQKKNHYGLVEAYVQNKELQDKA---NLVLTLRGIE-NPFEDYSRAGQEEKEILGKIIELIDNNDCR------G 335 (499)
T ss_dssp EECSCCCGGGCHHHHHHHHHTCHHHHHHC---EEEEEESSCS-BTTTBCTTSCHHHHHHHHHHHHHHHHTTCB------T
T ss_pred EEeecCccccCHHHHHHHHHHHHHhCCCc---eEEEEECCCC-CcccccccccccchHHHHHHHHHHHhcCCC------c
Confidence 99999999999999999999988776642 3566666411 11 0 11223456677777665432 1
Q ss_pred cEEEeCCCCCHHHHHHHHHhC----cEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCC
Q 003145 440 PIHHLDRSLDFPALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWN 513 (844)
Q Consensus 440 pv~~~~~~v~~~el~aly~~A----Dv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d 513 (844)
.|+ |.|.++.+++..+|+.| |++|+||..||||++++|||||| .|+|+|+.+|..+.+ |.+|++|+|.|
T Consensus 336 ~V~-~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G----~PvI~s~~~g~~e~v~~~~~g~l~~~~d 410 (499)
T 2r60_A 336 KVS-MFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASG----LPAVVTRNGGPAEILDGGKYGVLVDPED 410 (499)
T ss_dssp TEE-EEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTT----CCEEEESSBHHHHHTGGGTSSEEECTTC
T ss_pred eEE-ECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcC----CCEEEecCCCHHHHhcCCceEEEeCCCC
Confidence 266 48999999999999999 99999999999999999999996 899999998888888 45799999999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHhHHH
Q 003145 514 ITEVANAIARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETFVSELNDTVVE 565 (844)
Q Consensus 514 ~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~fl~~l~~~~~~ 565 (844)
++++|++|.+++++ ++.+.++.+++++++.+ |++...++.+++.++++...
T Consensus 411 ~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~ 462 (499)
T 2r60_A 411 PEDIARGLLKAFES-EETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADR 462 (499)
T ss_dssp HHHHHHHHHHHHSC-HHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 99999999999985 55777888888888876 99999999999999887644
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.8e-24 Score=241.94 Aligned_cols=295 Identities=18% Similarity=0.185 Sum_probs=213.7
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhh-hhcC----C-ccHHHHH-hhhcCCEEEEecHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI-HRTL----P-SRSDLLR-AVLAADLVGFHTYDYARHFV 303 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~-~r~l----p-~r~~ll~-~ll~aDlIgf~t~~~~~~Fl 303 (844)
..|+|++|++...+++.++.+. .++|+++++|..++.... +... + .+..+.+ .+-.+|.|.+.+....+.+.
T Consensus 122 ~~Div~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~ 200 (438)
T 3c48_A 122 TYDLIHSHYWLSGQVGWLLRDL-WRIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLM 200 (438)
T ss_dssp CCSEEEEEHHHHHHHHHHHHHH-HTCCEEEECSSCHHHHSCC----CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHH
T ss_pred CCCEEEeCCccHHHHHHHHHHH-cCCCEEEEecCCcccccccccccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHH
Confidence 3799999987665555555443 368899999987532110 0000 0 0111222 23468999998876666554
Q ss_pred HHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccccCCHHH
Q 003145 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQ 380 (844)
Q Consensus 304 ~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~ 380 (844)
+ .+|.. ..++.++|+|||.+.|.+... .....+++++ .++++|+++||+.+.||+..
T Consensus 201 ~----~~g~~-----------~~k~~vi~ngvd~~~~~~~~~-----~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ 260 (438)
T 3c48_A 201 H----HYDAD-----------PDRISVVSPGADVELYSPGND-----RATERSRRELGIPLHTKVVAFVGRLQPFKGPQV 260 (438)
T ss_dssp H----HHCCC-----------GGGEEECCCCCCTTTSCCC---------CHHHHHHTTCCSSSEEEEEESCBSGGGCHHH
T ss_pred H----HhCCC-----------hhheEEecCCccccccCCccc-----chhhhhHHhcCCCCCCcEEEEEeeecccCCHHH
Confidence 3 22322 235789999999988764311 1122356665 36789999999999999999
Q ss_pred HHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhC
Q 003145 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 460 (844)
Q Consensus 381 ~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~A 460 (844)
+++|+..+.+++|+. ++.|+++|.+.. +++. .+++++++.+.+.. ..|. +.|.++.+++..+|+.|
T Consensus 261 li~a~~~l~~~~p~~--~~~l~i~G~~~~-~g~~----~~~l~~~~~~~~l~------~~v~-~~g~~~~~~~~~~~~~a 326 (438)
T 3c48_A 261 LIKAVAALFDRDPDR--NLRVIICGGPSG-PNAT----PDTYRHMAEELGVE------KRIR-FLDPRPPSELVAVYRAA 326 (438)
T ss_dssp HHHHHHHHHHHCTTC--SEEEEEECCBC-----------CHHHHHHHHTTCT------TTEE-EECCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHhhCCCc--ceEEEEEeCCCC-CCcH----HHHHHHHHHHcCCC------CcEE-EcCCCChHHHHHHHHhC
Confidence 999999999998842 367888875321 1222 23445555544321 1355 47999999999999999
Q ss_pred cEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHH
Q 003145 461 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWH 538 (844)
Q Consensus 461 Dv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~ 538 (844)
|++|+||..||||++++|||||| .|+|+|..+|..+.+ +.+|++++|.|++++|++|.+++++ ++.+.++.++
T Consensus 327 dv~v~ps~~e~~~~~~~Eama~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~ 401 (438)
T 3c48_A 327 DIVAVPSFNESFGLVAMEAQASG----TPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDD-DETRIRMGED 401 (438)
T ss_dssp SEEEECCSCCSSCHHHHHHHHTT----CCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHHHHC-HHHHHHHHHH
T ss_pred CEEEECccccCCchHHHHHHHcC----CCEEecCCCChhHHhhCCCcEEECCCCCHHHHHHHHHHHHcC-HHHHHHHHHH
Confidence 99999999999999999999996 899999999999888 4579999999999999999999985 5577778888
Q ss_pred HHHHHHhcCHHHHHHHHHHHHHHhHHH
Q 003145 539 NFTHVTTHTAQEWAETFVSELNDTVVE 565 (844)
Q Consensus 539 ~~~~v~~~~~~~W~~~fl~~l~~~~~~ 565 (844)
+++++.++++...++.+++.++++...
T Consensus 402 ~~~~~~~~s~~~~~~~~~~~~~~~~~~ 428 (438)
T 3c48_A 402 AVEHARTFSWAATAAQLSSLYNDAIAN 428 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHhhh
Confidence 899988899999999999998887654
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-23 Score=242.73 Aligned_cols=299 Identities=17% Similarity=0.199 Sum_probs=211.3
Q ss_pred CCCEEEEeCccchhHHHHHHhc-CCCCeEEEEEecCCCCh----hhhhc--CCc-------------cHHHHHhhhcCCE
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTPFPSS----EIHRT--LPS-------------RSDLLRAVLAADL 290 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~-~~~~~i~~flH~Pfp~~----e~~r~--lp~-------------r~~ll~~ll~aDl 290 (844)
..|+|++|+++..+++.++++. ..++|+++++|..++.. ..+.. ++. ....-..+..+|.
T Consensus 130 ~~DiIh~~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 209 (485)
T 1rzu_A 130 RPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATA 209 (485)
T ss_dssp CCSEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSE
T ss_pred CCCEEEecccchhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCE
Confidence 5799999999888888888764 46789999999975421 11111 110 1122233456899
Q ss_pred EEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcC-----------CchHHHHHHHHHH
Q 003145 291 VGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI-----------NPVQVHIKELQET 359 (844)
Q Consensus 291 Igf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~-----------~~~~~~~~~lr~~ 359 (844)
|...+....+.+... .+|... ..+ +.....++.++|+|||.+.|.+.... +...+....++++
T Consensus 210 vi~~S~~~~~~~~~~---~~g~~~--~~~-~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 283 (485)
T 1rzu_A 210 LSTVSPSYAEEILTA---EFGMGL--EGV-IGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEH 283 (485)
T ss_dssp EEESCHHHHHHTTSH---HHHTTC--HHH-HHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHH
T ss_pred EEecCHhHHHHHhcc---ccCcch--HHH-HHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHh
Confidence 988887666554321 001000 000 00012368899999999988764211 0011123456666
Q ss_pred hC---C-CcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCC
Q 003145 360 FA---G-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGT 435 (844)
Q Consensus 360 ~~---~-~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~ 435 (844)
++ + +++|+++||+.+.||+..+++|+..+.+ + ++.|+++|.+ ++ .+++.+++++.+.+.
T Consensus 284 ~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~----~~~l~ivG~g-----~~--~~~~~l~~~~~~~~~---- 346 (485)
T 1rzu_A 284 FRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--L----GGRLVVLGAG-----DV--ALEGALLAAASRHHG---- 346 (485)
T ss_dssp HTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--T----TCEEEEEECB-----CH--HHHHHHHHHHHHTTT----
T ss_pred cCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHh--c----CceEEEEeCC-----ch--HHHHHHHHHHHhCCC----
Confidence 63 2 6799999999999999999999999866 2 3568888752 21 234556666665431
Q ss_pred CCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--c---------C
Q 003145 436 LTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G---------A 504 (844)
Q Consensus 436 ~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g---------~ 504 (844)
.|+++.|. +.+++..+|+.||++|+||..||||++++|||||| .|+|+|+.+|..+.+ | .
T Consensus 347 ----~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G----~PvI~s~~gg~~e~v~~~~~~~~~~~~~ 417 (485)
T 1rzu_A 347 ----RVGVAIGY-NEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYG----CIPVVARTGGLADTVIDANHAALASKAA 417 (485)
T ss_dssp ----TEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHT----CEEEEESSHHHHHHCCBCCHHHHHTTCC
T ss_pred ----cEEEecCC-CHHHHHHHHhcCCEEEECcccCCCCHHHHHHHHCC----CCEEEeCCCChhheecccccccccccCC
Confidence 37656777 88888999999999999999999999999999996 899999999998888 4 6
Q ss_pred CeEEECCCCHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhH
Q 003145 505 GAILVNPWNITEVANAIARALN--MSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTV 563 (844)
Q Consensus 505 ~g~lvnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~ 563 (844)
+|++++|.|++++|++|.+++. ..++.+.++.+++++ +.++++..++++++.++++.
T Consensus 418 ~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~~y~~~~ 476 (485)
T 1rzu_A 418 TGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAALYSQLI 476 (485)
T ss_dssp CBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHHHHHHT
T ss_pred cceEeCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH--HhCChHHHHHHHHHHHHHhh
Confidence 7999999999999999999994 245566666666654 78999999999998887764
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-23 Score=233.60 Aligned_cols=281 Identities=19% Similarity=0.225 Sum_probs=209.2
Q ss_pred CCCEEEEeCccchh-HHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHh-hhcCCEEEEecHHHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMF-LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA-VLAADLVGFHTYDYARHFVSACTR 308 (844)
Q Consensus 231 ~~DiVwvHDyhl~l-lp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~-ll~aDlIgf~t~~~~~~Fl~~~~~ 308 (844)
..|+||+|+...+. +...+++ ....++.+.+|...+ .+...+....+.+. +-.+|.|.+.+....+.+...
T Consensus 86 ~~Dvv~~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~---~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~--- 158 (394)
T 3okp_A 86 EIDNVWFGAAAPLALMAGTAKQ-AGASKVIASTHGHEV---GWSMLPGSRQSLRKIGTEVDVLTYISQYTLRRFKSA--- 158 (394)
T ss_dssp TCSEEEESSCTTGGGGHHHHHH-TTCSEEEEECCSTHH---HHTTSHHHHHHHHHHHHHCSEEEESCHHHHHHHHHH---
T ss_pred CCCEEEECCcchHHHHHHHHHh-cCCCcEEEEeccchh---hhhhcchhhHHHHHHHHhCCEEEEcCHHHHHHHHHh---
Confidence 46999999876553 4444444 333358888996432 12222333334333 346899999987666655441
Q ss_pred HhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhC---CCcEEEEEecccccCCHHHHHHHH
Q 003145 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---GRKVMLGVDRLDMIKGIPQKLLAF 385 (844)
Q Consensus 309 ~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~vil~VdRld~~KGi~~~l~Af 385 (844)
.+ ...++.++|+|||.+.|.+.. ......++++++ ++++|+++||+.+.||+..+++|+
T Consensus 159 -~~------------~~~~~~vi~ngv~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~ 220 (394)
T 3okp_A 159 -FG------------SHPTFEHLPSGVDVKRFTPAT-----PEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAM 220 (394)
T ss_dssp -HC------------SSSEEEECCCCBCTTTSCCCC-----HHHHHHHHHHTTCCTTCCEEEEESCSCGGGCHHHHHHHH
T ss_pred -cC------------CCCCeEEecCCcCHHHcCCCC-----chhhHHHHHhcCCCcCceEEEEEeccccccCHHHHHHHH
Confidence 11 124789999999998876421 123456677763 558999999999999999999999
Q ss_pred HHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEE
Q 003145 386 EKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALV 465 (844)
Q Consensus 386 ~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~ 465 (844)
+.+.+++|+++ |+++|. ++.. +.+++++..++. .|. +.|.++.+++..+|+.||++|+
T Consensus 221 ~~l~~~~~~~~----l~i~G~-----g~~~----~~l~~~~~~~~~--------~v~-~~g~~~~~~~~~~~~~ad~~v~ 278 (394)
T 3okp_A 221 PQVIAARPDAQ----LLIVGS-----GRYE----STLRRLATDVSQ--------NVK-FLGRLEYQDMINTLAAADIFAM 278 (394)
T ss_dssp HHHHHHSTTCE----EEEECC-----CTTH----HHHHHHTGGGGG--------GEE-EEESCCHHHHHHHHHHCSEEEE
T ss_pred HHHHhhCCCeE----EEEEcC-----chHH----HHHHHHHhcccC--------eEE-EcCCCCHHHHHHHHHhCCEEEe
Confidence 99999988754 877764 2322 233344323221 355 4789999999999999999999
Q ss_pred cCCC-------cCCChhHhhhhhcccCCCceEEEeCCCCchhhccC-CeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHH
Q 003145 466 TSLR-------DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGA-GAILVNPWNITEVANAIARALNMSPEEREKRHW 537 (844)
Q Consensus 466 ~S~~-------EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~lg~-~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~ 537 (844)
||.. ||||++++|||||| .|+|+|+.+|..+.+.. +|++++|.|+++++++|.+++++ ++.+.++.+
T Consensus 279 ps~~~~~~~~~e~~~~~~~Ea~a~G----~PvI~~~~~~~~e~i~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~ 353 (394)
T 3okp_A 279 PARTRGGGLDVEGLGIVYLEAQACG----VPVIAGTSGGAPETVTPATGLVVEGSDVDKLSELLIELLDD-PIRRAAMGA 353 (394)
T ss_dssp CCCCBGGGTBCCSSCHHHHHHHHTT----CCEEECSSTTGGGGCCTTTEEECCTTCHHHHHHHHHHHHTC-HHHHHHHHH
T ss_pred cCccccccccccccCcHHHHHHHcC----CCEEEeCCCChHHHHhcCCceEeCCCCHHHHHHHHHHHHhC-HHHHHHHHH
Confidence 9999 99999999999996 89999999999888822 89999999999999999999984 567777888
Q ss_pred HHHHHHHh-cCHHHHHHHHHHHHHHhH
Q 003145 538 HNFTHVTT-HTAQEWAETFVSELNDTV 563 (844)
Q Consensus 538 ~~~~~v~~-~~~~~W~~~fl~~l~~~~ 563 (844)
++++++.+ ++++.+++.+++.+++..
T Consensus 354 ~~~~~~~~~~s~~~~~~~~~~~~~~~~ 380 (394)
T 3okp_A 354 AGRAHVEAEWSWEIMGERLTNILQSEP 380 (394)
T ss_dssp HHHHHHHHHTBHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 88888865 899999999999888754
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-23 Score=237.61 Aligned_cols=280 Identities=21% Similarity=0.205 Sum_probs=201.1
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHh
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (844)
..|+|++|+++...+..++++ ..|+.+++|..++.... .....+.+.+..+|.+.+.+.++.+.
T Consensus 126 ~~Dvv~~~~~~~~~~~~~~~~---~~p~v~~~h~~~~~~~~----~~~~~~~~~~~~~~~~i~~~s~~~~~--------- 189 (416)
T 2x6q_A 126 SFDYVLVHDPQPAALIEFYEK---KSPWLWRCHIDLSSPNR----EFWEFLRRFVEKYDRYIFHLPEYVQP--------- 189 (416)
T ss_dssp GSSEEEEESSTTGGGGGGSCC---CSCEEEECCSCCSSCCH----HHHHHHHHHHTTSSEEEESSGGGSCT---------
T ss_pred CCCEEEEeccchhhHHHHHHh---cCCEEEEEccccCCccH----HHHHHHHHHHHhCCEEEEechHHHHh---------
Confidence 569999999887766655543 28899999987754210 00111222233456555443322211
Q ss_pred CcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccccCCHHHHHHHHHH
Q 003145 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFEK 387 (844)
Q Consensus 311 ~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~l~Af~~ 387 (844)
.+ . ..++.++|+|||+..|.+... .......+++++ .++++|+++||+.+.||+..+++|+..
T Consensus 190 -------~~--~--~~~~~vi~ngvd~~~~~~~~~---~~~~~~~~r~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~ 255 (416)
T 2x6q_A 190 -------EL--D--RNKAVIMPPSIDPLSEKNVEL---KQTEILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRK 255 (416)
T ss_dssp -------TS--C--TTTEEECCCCBCTTSTTTSCC---CHHHHHHHHHHTTCCTTSCEEEEECCCCTTSCHHHHHHHHHH
T ss_pred -------hC--C--ccceEEeCCCCChhhhccccc---ChhhHHHHHHHhCCCCCCcEEEEEeccccccCHHHHHHHHHH
Confidence 11 1 135779999999877654211 122345567776 367899999999999999999999999
Q ss_pred HHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCC---CCCHHHHHHHHHhCcEEE
Q 003145 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR---SLDFPALCALYAVTDVAL 464 (844)
Q Consensus 388 ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~---~v~~~el~aly~~ADv~v 464 (844)
+.+++|+++ |+++|.+... .+++ .+.+++++.+.+.. ..|.+ .| .++.+++..+|+.||++|
T Consensus 256 l~~~~~~~~----l~i~G~g~~~-~~~~---~~~l~~~~~~~~~~------~~V~~-~G~~~~~~~~~~~~~~~~ad~~v 320 (416)
T 2x6q_A 256 VKEKIPGVQ----LLLVGVMAHD-DPEG---WIYFEKTLRKIGED------YDVKV-LTNLIGVHAREVNAFQRASDVIL 320 (416)
T ss_dssp HHHHCTTCE----EEEEECCCTT-CHHH---HHHHHHHHHHHTTC------TTEEE-EEGGGTCCHHHHHHHHHHCSEEE
T ss_pred HHHhCCCeE----EEEEecCccc-chhH---HHHHHHHHHHhCCC------CcEEE-ecccCCCCHHHHHHHHHhCCEEE
Confidence 999888754 8888764321 1322 33444555554421 13665 55 456889999999999999
Q ss_pred EcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 003145 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542 (844)
Q Consensus 465 ~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~ 542 (844)
+||..||||++++|||||| .|+|+|+.+|..+.+ |.+|++++ |++++|++|.+++++ ++.+.++.++++++
T Consensus 321 ~ps~~E~~~~~~lEAma~G----~PvI~~~~~g~~e~i~~~~~g~l~~--d~~~la~~i~~ll~~-~~~~~~~~~~a~~~ 393 (416)
T 2x6q_A 321 QMSIREGFGLTVTEAMWKG----KPVIGRAVGGIKFQIVDGETGFLVR--DANEAVEVVLYLLKH-PEVSKEMGAKAKER 393 (416)
T ss_dssp ECCSSCSSCHHHHHHHHTT----CCEEEESCHHHHHHCCBTTTEEEES--SHHHHHHHHHHHHHC-HHHHHHHHHHHHHH
T ss_pred ECCCcCCCccHHHHHHHcC----CCEEEccCCCChhheecCCCeEEEC--CHHHHHHHHHHHHhC-HHHHHHHHHHHHHH
Confidence 9999999999999999996 899999998888888 56899997 999999999999985 45777777888888
Q ss_pred HH-hcCHHHHHHHHHHHHHHh
Q 003145 543 VT-THTAQEWAETFVSELNDT 562 (844)
Q Consensus 543 v~-~~~~~~W~~~fl~~l~~~ 562 (844)
+. .|++...++.+++.++++
T Consensus 394 ~~~~fs~~~~~~~~~~~~~~l 414 (416)
T 2x6q_A 394 VRKNFIITKHMERYLDILNSL 414 (416)
T ss_dssp HHHHTBHHHHHHHHHHHHHTC
T ss_pred HHHHcCHHHHHHHHHHHHHHh
Confidence 75 799999999998887654
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.5e-24 Score=260.80 Aligned_cols=311 Identities=12% Similarity=0.106 Sum_probs=213.5
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHH-------------HHhhhcCCEEEEecHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL-------------LRAVLAADLVGFHTYD 297 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~l-------------l~~ll~aDlIgf~t~~ 297 (844)
..|+|+.|++...+++.+++++. ++|++++.|...+..-......| +.+ ...+-.||.|...+..
T Consensus 407 ~PDVIHsH~~~sglva~llar~~-gvP~V~T~Hsl~~~k~~~~~~~~-~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~ 484 (816)
T 3s28_A 407 KPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYW-KKLDDKYHFSCQFTADIFAMNHTDFIITSTFQ 484 (816)
T ss_dssp CCSEEEEEHHHHHHHHHHHHHHH-TCCEEEECSCCHHHHSTTTTTTH-HHHHHHHCHHHHHHHHHHHHHHSSEEEESCHH
T ss_pred CCeEEEeCCchHHHHHHHHHHHc-CCCEEEEEecccccccccccchh-hhHHHHHHHHHHHHHHHHHHHhCCEEEECCHH
Confidence 57999999877767777776654 78999999975322111111111 111 1145578999888875
Q ss_pred HHHHHHHHHHHHhCccc---CCC------ceeeCCeEEEEEEEecccChhHHhhhhcCCc----hHHHHHHH-------H
Q 003145 298 YARHFVSACTRILGFEG---TPE------GVEDQGRLTRVAAFPIGIDSERFIRALEINP----VQVHIKEL-------Q 357 (844)
Q Consensus 298 ~~~~Fl~~~~~~l~~~~---~~~------~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~----~~~~~~~l-------r 357 (844)
..+.....+.. .+... .+. ++..... ++.++|+|||.+.|.+...... .......+ +
T Consensus 485 ~~~~l~~~~~~-y~~~~~~~~p~Lyr~~~gI~~~~~--ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r 561 (816)
T 3s28_A 485 EIAGSKETVGQ-YESHTAFTLPGLYRVVHGIDVFDP--KFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENK 561 (816)
T ss_dssp HHHCCSSSCCT-TGGGSSEEETTTEEEEESCCTTCT--TEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBT
T ss_pred HHHHHHHHHHH-hhhhhccccchhhhcccccccCCC--CEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHH
Confidence 44421110000 00000 000 1111111 7899999999999977542211 00111111 0
Q ss_pred HH-----hCCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCC--CChHHHHHHHHHHHHHHHHhh
Q 003145 358 ET-----FAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTR--TDVPEYQRLTSQVHEIVGRIN 430 (844)
Q Consensus 358 ~~-----~~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r--~~~~~~~~l~~~l~~lv~~IN 430 (844)
+. -.++++|+++||+++.||+..+++|+.++.+.+|+ +.|+++|.+.. ...++..+..+++.+++.+.+
T Consensus 562 ~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~----v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lg 637 (816)
T 3s28_A 562 EHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLREL----ANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYK 637 (816)
T ss_dssp TEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHH----CEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTT
T ss_pred HHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCC----eEEEEEeCCCcccccchhhHHHHHHHHHHHHHcC
Confidence 11 13578999999999999999999999999887775 45888876541 122334445667777777654
Q ss_pred cccCCCCcccEEEeCC----CCCHHHHHHHHH-hCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--c
Q 003145 431 GRFGTLTAVPIHHLDR----SLDFPALCALYA-VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G 503 (844)
Q Consensus 431 ~~~g~~~~~pv~~~~~----~v~~~el~aly~-~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g 503 (844)
.. ..|.| .| .++.+++..+|+ +||+||+||..||||++++|||||| .|+|+|+.+|..+.+ |
T Consensus 638 L~------~~V~f-lG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G----~PVIasd~GG~~EiV~dg 706 (816)
T 3s28_A 638 LN------GQFRW-ISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG----LPTFATCKGGPAEIIVHG 706 (816)
T ss_dssp CB------BBEEE-ECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTT----CCEEEESSBTHHHHCCBT
T ss_pred CC------CcEEE-ccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcC----CCEEEeCCCChHHHHccC
Confidence 32 13664 55 445699999998 6899999999999999999999996 899999999999988 6
Q ss_pred CCeEEECCCCHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHh
Q 003145 504 AGAILVNPWNITEVANAIARAL----NMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELNDT 562 (844)
Q Consensus 504 ~~g~lvnP~d~~~~A~ai~~aL----~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~~ 562 (844)
.+|++|+|.|++++|++|.+++ .++ +.+.++.+++++++ +.|+|..+++++++.++..
T Consensus 707 ~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~-~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~ 769 (816)
T 3s28_A 707 KSGFHIDPYHGDQAADTLADFFTKCKEDP-SHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVY 769 (816)
T ss_dssp TTBEEECTTSHHHHHHHHHHHHHHHHHCT-HHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHH
T ss_pred CcEEEeCCCCHHHHHHHHHHHHHHhccCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 7899999999999999998877 544 57788888889988 7899999999999877764
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.3e-23 Score=231.11 Aligned_cols=279 Identities=18% Similarity=0.209 Sum_probs=201.1
Q ss_pred CCCEEEEeCccchhHHHHH-HhcC-CCCeEEEEEecCCCChhhhhcCCccHHHHHh-hhcCCEEEEecHHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCL-KEYN-SDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA-VLAADLVGFHTYDYARHFVSACT 307 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~l-r~~~-~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~-ll~aDlIgf~t~~~~~~Fl~~~~ 307 (844)
..|+|++|......++.++ ++.. .++|+.+++|...+ ..+..-+....+.+. +-.+|.|...+....+.+.+
T Consensus 99 ~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~--~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~--- 173 (394)
T 2jjm_A 99 NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDI--TVLGSDPSLNNLIRFGIEQSDVVTAVSHSLINETHE--- 173 (394)
T ss_dssp TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHH--HTTTTCTTTHHHHHHHHHHSSEEEESCHHHHHHHHH---
T ss_pred CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcc--cccCCCHHHHHHHHHHHhhCCEEEECCHHHHHHHHH---
Confidence 4599999987654444443 3333 36899999997422 111111222333333 44689999888766555433
Q ss_pred HHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccccCCHHHHHHH
Q 003145 308 RILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLA 384 (844)
Q Consensus 308 ~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~l~A 384 (844)
..+ ...++.++|+|||++.|.+.. . ..+++++ .++++|+++||+.+.||+..+++|
T Consensus 174 -~~~------------~~~~~~vi~ngv~~~~~~~~~--~------~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a 232 (394)
T 2jjm_A 174 -LVK------------PNKDIQTVYNFIDERVYFKRD--M------TQLKKEYGISESEKILIHISNFRKVKRVQDVVQA 232 (394)
T ss_dssp -HTC------------CSSCEEECCCCCCTTTCCCCC--C------HHHHHHTTCC---CEEEEECCCCGGGTHHHHHHH
T ss_pred -hhC------------CcccEEEecCCccHHhcCCcc--h------HHHHHHcCCCCCCeEEEEeeccccccCHHHHHHH
Confidence 111 124688999999998876431 1 2345555 357899999999999999999999
Q ss_pred HHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEE
Q 003145 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (844)
Q Consensus 385 f~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v 464 (844)
++.+.++ ++ +.|+++|. +++.. ++++++.+.+.. ..|.+ .|. .+++..+|+.||++|
T Consensus 233 ~~~l~~~-~~----~~l~i~G~-----g~~~~----~l~~~~~~~~l~------~~v~~-~g~--~~~~~~~~~~adv~v 289 (394)
T 2jjm_A 233 FAKIVTE-VD----AKLLLVGD-----GPEFC----TILQLVKNLHIE------DRVLF-LGK--QDNVAELLAMSDLML 289 (394)
T ss_dssp HHHHHHS-SC----CEEEEECC-----CTTHH----HHHHHHHTTTCG------GGBCC-CBS--CSCTHHHHHTCSEEE
T ss_pred HHHHHhh-CC----CEEEEECC-----chHHH----HHHHHHHHcCCC------CeEEE-eCc--hhhHHHHHHhCCEEE
Confidence 9998776 33 45777763 23333 344444443311 12443 553 578999999999999
Q ss_pred EcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 003145 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542 (844)
Q Consensus 465 ~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~ 542 (844)
+||..||||++++|||||| .|+|+|+.+|..+.+ |.+|++++|.|++++|++|.+++++ ++.+.++.++++++
T Consensus 290 ~ps~~e~~~~~~~EAma~G----~PvI~~~~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~~~~~ 364 (394)
T 2jjm_A 290 LLSEKESFGLVLLEAMACG----VPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKD-EELHRNMGERARES 364 (394)
T ss_dssp ECCSCCSCCHHHHHHHHTT----CCEEEECCTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHHHC-HHHHHHHHHHHHHH
T ss_pred eccccCCCchHHHHHHhcC----CCEEEecCCChHHHhhcCCceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHH
Confidence 9999999999999999996 899999999999888 5689999999999999999999985 55777788888888
Q ss_pred H-HhcCHHHHHHHHHHHHHHhH
Q 003145 543 V-TTHTAQEWAETFVSELNDTV 563 (844)
Q Consensus 543 v-~~~~~~~W~~~fl~~l~~~~ 563 (844)
+ +.++++..++.+++.++++.
T Consensus 365 ~~~~~s~~~~~~~~~~~~~~~~ 386 (394)
T 2jjm_A 365 VYEQFRSEKIVSQYETIYYDVL 386 (394)
T ss_dssp HHHHSCHHHHHHHHHHHHHHTC
T ss_pred HHHhCCHHHHHHHHHHHHHHHH
Confidence 8 88999999999999888764
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.3e-23 Score=233.37 Aligned_cols=283 Identities=14% Similarity=0.098 Sum_probs=203.1
Q ss_pred CCCEEEEeCccchhHHHHHHhc-CC-CCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCC--EEEEecHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEY-NS-DMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAAD--LVGFHTYDYARHFVSAC 306 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~-~~-~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aD--lIgf~t~~~~~~Fl~~~ 306 (844)
..|+|++|.+...+.+.+.+.. .| ..++...+|...+... ..+...+-.+| .|.+.+....+.+..
T Consensus 81 ~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ii~~S~~~~~~~~~-- 150 (413)
T 3oy2_A 81 KPDIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKNIR--------ENLWWIFSHPKVVGVMAMSKCWISDICN-- 150 (413)
T ss_dssp CCSEEEEEECHHHHHHHHHHGGGCCSCCEEEEEECCCSBSCC--------GGGGGGGGCTTEEEEEESSTHHHHHHHH--
T ss_pred CCCEEEEcchHHHHHHHHHHhccCCCCCceeeeccccchhhH--------HHHHHHHhccCCceEEEcCHHHHHHHHH--
Confidence 4699999954444333333222 22 3456666665443211 11222334577 888887755555433
Q ss_pred HHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---C--CCcEEEEEecccccCCHHHH
Q 003145 307 TRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---A--GRKVMLGVDRLDMIKGIPQK 381 (844)
Q Consensus 307 ~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~--~~~vil~VdRld~~KGi~~~ 381 (844)
++. ..++.++|+|||.+.|.. .++.+ . ++++|+++||+.+.||+..+
T Consensus 151 ---~~~------------~~~~~vi~ngvd~~~~~~-------------~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~l 202 (413)
T 3oy2_A 151 ---YGC------------KVPINIVSHFVDTKTIYD-------------ARKLVGLSEYNDDVLFLNMNRNTARKRLDIY 202 (413)
T ss_dssp ---TTC------------CSCEEECCCCCCCCCCTT-------------HHHHTTCGGGTTSEEEECCSCSSGGGTHHHH
T ss_pred ---cCC------------CCceEEeCCCCCHHHHHH-------------HHHhcCCCcccCceEEEEcCCCchhcCcHHH
Confidence 221 246889999999987721 22333 2 57899999999999999999
Q ss_pred HHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCc-ccEEEeCCCCCHHHHHHHHHhC
Q 003145 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTA-VPIHHLDRSLDFPALCALYAVT 460 (844)
Q Consensus 382 l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~-~pv~~~~~~v~~~el~aly~~A 460 (844)
++|+..+.+++|+++ |+++|.+..... .++++.+.+++.+.+..- ...+ ..|+++.|.++.+++..+|+.|
T Consensus 203 i~a~~~l~~~~~~~~----l~ivG~g~~~~~---~~l~~~~~~~~~~~~l~~-~v~~l~~vv~~~g~~~~~~~~~~~~~a 274 (413)
T 3oy2_A 203 VLAAARFISKYPDAK----VRFLCNSHHESK---FDLHSIALRELVASGVDN-VFTHLNKIMINRTVLTDERVDMMYNAC 274 (413)
T ss_dssp HHHHHHHHHHCTTCC----EEEEEECCTTCS---CCHHHHHHHHHHHHTCSC-HHHHHTTEEEECSCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCcE----EEEEeCCcccch---hhHHHHHHHHHHHcCccc-ccccccceeeccCcCCHHHHHHHHHhC
Confidence 999999999999875 888876542211 124455566665544320 0000 0156679999999999999999
Q ss_pred cEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCC---------------eE--EECCCCHHHHHHHH
Q 003145 461 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAG---------------AI--LVNPWNITEVANAI 521 (844)
Q Consensus 461 Dv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~---------------g~--lvnP~d~~~~A~ai 521 (844)
|++|+||..||||++++|||||| .|+|+|+.+|..+.+ +.+ |+ +++|.|++++|++|
T Consensus 275 dv~v~pS~~E~~~~~~lEAma~G----~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i 350 (413)
T 3oy2_A 275 DVIVNCSSGEGFGLCSAEGAVLG----KPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF 350 (413)
T ss_dssp SEEEECCSCCSSCHHHHHHHTTT----CCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH
T ss_pred CEEEeCCCcCCCCcHHHHHHHcC----CCEEEcCCCChHHHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH
Confidence 99999999999999999999996 899999999988888 344 88 99999999999999
Q ss_pred HHHhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHhHHH
Q 003145 522 ARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELNDTVVE 565 (844)
Q Consensus 522 ~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~~~~~ 565 (844)
++++ .++.+.++.+++++++ +.++++.+++.+++.++++...
T Consensus 351 -~l~~-~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~ 393 (413)
T 3oy2_A 351 -TFFK-DEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRV 393 (413)
T ss_dssp -HHTT-SHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC-
T ss_pred -HHhc-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 9998 4567788888889988 5789999999999999887543
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=8.6e-23 Score=228.59 Aligned_cols=275 Identities=17% Similarity=0.097 Sum_probs=209.0
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHh
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (844)
..|+|++|.+....++..+.+. .+.|+.+++|..+|....+..+-.. +-..+-.+|.|.+.+....+.+.+ .+
T Consensus 107 ~~Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~--~~~~~~~~d~ii~~s~~~~~~~~~----~~ 179 (406)
T 2gek_A 107 DFDVLHIHEPNAPSLSMLALQA-AEGPIVATFHTSTTKSLTLSVFQGI--LRPYHEKIIGRIAVSDLARRWQME----AL 179 (406)
T ss_dssp CCSEEEEECCCSSSHHHHHHHH-EESSEEEEECCCCCSHHHHHHHHST--THHHHTTCSEEEESSHHHHHHHHH----HH
T ss_pred CCCEEEECCccchHHHHHHHHh-cCCCEEEEEcCcchhhhhHHHHHHH--HHHHHhhCCEEEECCHHHHHHHHH----hc
Confidence 4699999998887765555443 3689999999988875433221111 113445789999998766655543 11
Q ss_pred CcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecc-cccCCHHHHHHHHHHHH
Q 003145 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRL-DMIKGIPQKLLAFEKFL 389 (844)
Q Consensus 311 ~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRl-d~~KGi~~~l~Af~~ll 389 (844)
+ ..++ ++|+|||.+.|.+...... + -.++++|+++||+ .+.||+..+++|+..+.
T Consensus 180 ~-------------~~~~-vi~~~v~~~~~~~~~~~~~-------~---~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~ 235 (406)
T 2gek_A 180 G-------------SDAV-EIPNGVDVASFADAPLLDG-------Y---PREGRTVLFLGRYDEPRKGMAVLLAALPKLV 235 (406)
T ss_dssp S-------------SCEE-ECCCCBCHHHHHTCCCCTT-------C---SCSSCEEEEESCTTSGGGCHHHHHHHHHHHH
T ss_pred C-------------CCcE-EecCCCChhhcCCCchhhh-------c---cCCCeEEEEEeeeCccccCHHHHHHHHHHHH
Confidence 1 1257 9999999998875432110 0 0256899999999 99999999999999998
Q ss_pred HhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCC-
Q 003145 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL- 468 (844)
Q Consensus 390 ~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~- 468 (844)
+++|++ .|+++|. ++. +.++ +++.++. ..|. +.|.++.+++..+|+.||++|+||.
T Consensus 236 ~~~~~~----~l~i~G~-----~~~-~~l~----~~~~~~~--------~~v~-~~g~~~~~~~~~~~~~adv~v~ps~~ 292 (406)
T 2gek_A 236 ARFPDV----EILIVGR-----GDE-DELR----EQAGDLA--------GHLR-FLGQVDDATKASAMRSADVYCAPHLG 292 (406)
T ss_dssp TTSTTC----EEEEESC-----SCH-HHHH----HHTGGGG--------GGEE-ECCSCCHHHHHHHHHHSSEEEECCCS
T ss_pred HHCCCe----EEEEEcC-----CcH-HHHH----HHHHhcc--------CcEE-EEecCCHHHHHHHHHHCCEEEecCCC
Confidence 888865 4777764 232 3333 3333321 1365 4899999999999999999999997
Q ss_pred CcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Q 003145 469 RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTH 546 (844)
Q Consensus 469 ~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 546 (844)
.||||++++|||||| .|+|+|..+|..+.+ |.+|++++|.|+++++++|.+++++ ++.+.++.+++++++..+
T Consensus 293 ~e~~~~~~~Ea~a~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~ 367 (406)
T 2gek_A 293 GESFGIVLVEAMAAG----TAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGILED-DQLRAGYVARASERVHRY 367 (406)
T ss_dssp CCSSCHHHHHHHHHT----CEEEECCCHHHHHHHTTTTSSEECCTTCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHGGGG
T ss_pred CCCCchHHHHHHHcC----CCEEEecCCcHHHHhcCCCceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHhC
Confidence 999999999999996 799999998888887 4679999999999999999999985 456777788888988899
Q ss_pred CHHHHHHHHHHHHHHhHH
Q 003145 547 TAQEWAETFVSELNDTVV 564 (844)
Q Consensus 547 ~~~~W~~~fl~~l~~~~~ 564 (844)
++...++.+++.++++..
T Consensus 368 s~~~~~~~~~~~~~~~~~ 385 (406)
T 2gek_A 368 DWSVVSAQIMRVYETVSG 385 (406)
T ss_dssp BHHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 999999999998887653
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.3e-22 Score=231.58 Aligned_cols=333 Identities=12% Similarity=0.041 Sum_probs=213.5
Q ss_pred HHHHHHHHHHHHHHHHhhC-CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecC----C----CChhhhhcCC-----
Q 003145 211 FAAYIKANQMFADVVNKHY-KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTP----F----PSSEIHRTLP----- 276 (844)
Q Consensus 211 ~~~Y~~vN~~fa~~i~~~~-~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~P----f----p~~e~~r~lp----- 276 (844)
...+--+-..|.+.+..+- .+.|++++||||..++|.+||+..++++.+|+.|.- + -..+++..+.
T Consensus 160 ~~~F~y~~~avl~~l~~~~~~~pdIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d 239 (725)
T 3nb0_A 160 AILLGYTVAWFLGEVAHLDSQHAIVAHFHEWLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVD 239 (725)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSEEEEEEEESGGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEeCchhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCC
Confidence 3444444455554444332 346999999999999999999999999999999974 1 0111111111
Q ss_pred ---------ccHHH-HHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcC
Q 003145 277 ---------SRSDL-LRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI 346 (844)
Q Consensus 277 ---------~r~~l-l~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~ 346 (844)
..-.+ -.++..||.|..-+..|++.-. .+++.. ...+ +|||||++.|.+....
T Consensus 240 ~ea~~~~i~~~~~~EKaga~~AD~ITTVS~~yA~Ei~----~Ll~r~-----------~d~i--IpNGID~~~f~p~~~~ 302 (725)
T 3nb0_A 240 HEAGRFGIYHRYCIERAAAHSADVFTTVSQITAFEAE----HLLKRK-----------PDGI--LPNGLNVIKFQAFHEF 302 (725)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHSSEEEESSHHHHHHHH----HHTSSC-----------CSEE--CCCCBCCCCCSSTTHH
T ss_pred hhhhhhchhHHHHHHHHHHHhCCEEEECCHHHHHHHH----HHhcCC-----------CCEE--EcCCccccccCcchhh
Confidence 01122 2345678999888877766432 344322 1123 9999999988763110
Q ss_pred ----CchHHHHH-HHHHHh-------CCCcEEEE-Eeccc-ccCCHHHHHHHHHHHHHhC--cCCCCceEEEEEEcCCCC
Q 003145 347 ----NPVQVHIK-ELQETF-------AGRKVMLG-VDRLD-MIKGIPQKLLAFEKFLEEN--SDWRGKVVLLQIAVPTRT 410 (844)
Q Consensus 347 ----~~~~~~~~-~lr~~~-------~~~~vil~-VdRld-~~KGi~~~l~Af~~ll~~~--P~~~~~v~Lv~i~~p~r~ 410 (844)
.+.++.++ .++..+ .+++++++ +||++ ..||++.+++|+.++...- .... +-++..|..|+..
T Consensus 303 ~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~-~~vvafii~p~~~ 381 (725)
T 3nb0_A 303 QNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSK-KTVVAFIVMPAKN 381 (725)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCC-CEEEEEEECCCCE
T ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCC-CcEEEEEEeCCCC
Confidence 01112221 123322 14566666 79999 6799999999999986431 1111 2223333445544
Q ss_pred ChHH-----HHHHHHHHHHHHH----------------------------------------------------------
Q 003145 411 DVPE-----YQRLTSQVHEIVG---------------------------------------------------------- 427 (844)
Q Consensus 411 ~~~~-----~~~l~~~l~~lv~---------------------------------------------------------- 427 (844)
.... .+.+.+++++.+.
T Consensus 382 ~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp 461 (725)
T 3nb0_A 382 NSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPP 461 (725)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCC
T ss_pred CCCchhhhcchhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCC
Confidence 3321 1111111111111
Q ss_pred -------------------HhhcccCCCCcccEEEeCCCCCHH------HHHHHHHhCcEEEEcCCCcCCChhHhhhhhc
Q 003145 428 -------------------RINGRFGTLTAVPIHHLDRSLDFP------ALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482 (844)
Q Consensus 428 -------------------~IN~~~g~~~~~pv~~~~~~v~~~------el~aly~~ADv~v~~S~~EG~~Lv~~Eama~ 482 (844)
+++-.=...+...|+|+.+.++.. ++..+|+.||+||+||.+||||++++|||||
T Consensus 462 ~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~ 541 (725)
T 3nb0_A 462 IVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVM 541 (725)
T ss_dssp SBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHT
T ss_pred eeeeecccCCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHc
Confidence 111000111335578888888876 5899999999999999999999999999999
Q ss_pred ccCCCceEEEeCCCCchhhc--c-------CCeEEEC---CCCHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHHHhc
Q 003145 483 QDLKKGVLILSEFAGAAQSL--G-------AGAILVN---PWNITEVANAIARAL----NMSPEEREKRHWHNFTHVTTH 546 (844)
Q Consensus 483 ~~~~~g~lVlSe~~G~~~~l--g-------~~g~lvn---P~d~~~~A~ai~~aL----~m~~~er~~r~~~~~~~v~~~ 546 (844)
| .|+|+|..+|+.+.+ + .+|++|. |.|+++++++|.++| .+++.+|..+.++.++..+.+
T Consensus 542 G----~PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~F 617 (725)
T 3nb0_A 542 G----VPSITTNVSGFGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLL 617 (725)
T ss_dssp T----CCEEEETTBHHHHHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGG
T ss_pred C----CCEEEeCCCChhhhhhccccccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 6 899999999998876 2 2588884 567777766666665 467777777777777778899
Q ss_pred CHHHHHHHHHHHHHHhHHH
Q 003145 547 TAQEWAETFVSELNDTVVE 565 (844)
Q Consensus 547 ~~~~W~~~fl~~l~~~~~~ 565 (844)
+|.+-++.+++.++.+...
T Consensus 618 SWe~iA~~Yl~~Ye~aL~~ 636 (725)
T 3nb0_A 618 DWKRMGLEYVKARQLALRR 636 (725)
T ss_dssp BHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhh
Confidence 9999999999998887543
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-22 Score=218.18 Aligned_cols=218 Identities=16% Similarity=0.197 Sum_probs=147.7
Q ss_pred HHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc--C
Q 003145 584 ERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--N 661 (844)
Q Consensus 584 ~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l--~ 661 (844)
..|...+.|+|+||+||||++.. ...++++++++|++|.+ .|+.|+++|||+...+..+++.+ .
T Consensus 14 ~~~~~~~~kli~~DlDGTLl~~~-------------~~~i~~~~~~al~~l~~-~G~~v~iaTGR~~~~~~~~~~~l~~~ 79 (283)
T 3dao_A 14 NLYFQGMIKLIATDIDGTLVKDG-------------SLLIDPEYMSVIDRLID-KGIIFVVCSGRQFSSEFKLFAPIKHK 79 (283)
T ss_dssp -----CCCCEEEECCBTTTBSTT-------------CSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHTGGGGGG
T ss_pred hhhhccCceEEEEeCcCCCCCCC-------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 46888999999999999999873 12689999999999998 59999999999999999999988 4
Q ss_pred ceEEeecceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCC----------CceEee------------------
Q 003145 662 LWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTP----------RSHFEQ------------------ 713 (844)
Q Consensus 662 l~liaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~----------gs~iE~------------------ 713 (844)
.++|++||+.+...+... .....+.+ .+.++++.+.+..+ +.+...
T Consensus 80 ~~~I~~NGa~i~~~~~~i---~~~~l~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (283)
T 3dao_A 80 LLYITDGGTVVRTPKEIL---KTYPMDED---IWKGMCRMVRDELPACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMR 153 (283)
T ss_dssp CEEEETTTTEEECSSCEE---EECCCCHH---HHHHHHHHHHHHCTTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEE
T ss_pred cEEEECCCcEEEECCEEE---EEecCCHH---HHHHHHHHHHHhcCCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCce
Confidence 589999999998643321 11223433 34444444433211 111110
Q ss_pred -----------ccceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhc
Q 003145 714 -----------RETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIV 781 (844)
Q Consensus 714 -----------k~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v-~~g~~~vEV~p~gvnKG~al~~Ll~~l~ 781 (844)
....+.+.. +++........+.+.+ . ..+.+ .++..++||.|+++|||.|++.|++++|
T Consensus 154 ~~~~l~~l~~~~~~ki~i~~---~~~~~~~~~~~l~~~~-----~-~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lg 224 (283)
T 3dao_A 154 EVDDITRLDRNDIIKFTVFH---PDKCEELCTPVFIPAW-----N-KKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFD 224 (283)
T ss_dssp ECSCGGGCCCSCCCEEEEEC---SSCHHHHHTTTHHHHH-----T-TTEEEEEETTTEEEEEETTCCHHHHHHHHHHHTT
T ss_pred EcCCHHHcCccCceEEEEEc---ChHHHHHHHHHHHHHh-----c-CCEEEEEecCceEEEeeCCCcHHHHHHHHHHHhC
Confidence 001111100 0110011112233333 1 23554 4678899999999999999999999999
Q ss_pred ccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcc---hhhhcCCHHH--HHHHHHHH
Q 003145 782 HSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSL---SKEKKRKVHQ--LFGIFLRF 837 (844)
Q Consensus 782 ~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~---a~~~l~~~~~--v~~~l~~~ 837 (844)
++++++++||| +.|| ||+ |++|+||||.+++ |++...+.++ |..+|+++
T Consensus 225 ------i~~~e~ia~GD-~~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~s~~edGv~~~l~~~ 282 (283)
T 3dao_A 225 ------LLPDEVCCFGD-NLNDIEMLQNAGISYAVSNARQEVIAAAKHTCAPYWENGVLSVLKSF 282 (283)
T ss_dssp ------CCGGGEEEEEC-SGGGHHHHHHSSEEEEETTSCHHHHHHSSEEECCGGGTHHHHHHHHT
T ss_pred ------CCHHHEEEECC-CHHHHHHHHhCCCEEEcCCCCHHHHHhcCeECCCCCCChHHHHHHHh
Confidence 78999999999 9999 999 9999999998654 4556666666 77777765
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.88 E-value=8.9e-22 Score=211.61 Aligned_cols=220 Identities=16% Similarity=0.197 Sum_probs=142.1
Q ss_pred HHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC--
Q 003145 584 ERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN-- 661 (844)
Q Consensus 584 ~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-- 661 (844)
.+|...+.|+|+||+||||++. ...++++++++|++|.+ +|+.|+|+|||+...+..+++.++
T Consensus 14 ~~~~~~~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~v~iaTGR~~~~~~~~~~~l~~~ 78 (285)
T 3pgv_A 14 NLYFQGMYQVVASDLDGTLLSP--------------DHFLTPYAKETLKLLTA-RGINFVFATGRHYIDVGQIRDNLGIR 78 (285)
T ss_dssp -------CCEEEEECCCCCSCT--------------TSCCCHHHHHHHHHHHT-TTCEEEEECSSCGGGGHHHHHHHCSC
T ss_pred cccccCcceEEEEeCcCCCCCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHhcCCC
Confidence 5799999999999999999986 35689999999999987 699999999999999999998874
Q ss_pred ceEEeecceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCc----------eEeeccc---------------
Q 003145 662 LWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRS----------HFEQRET--------------- 716 (844)
Q Consensus 662 l~liaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs----------~iE~k~~--------------- 716 (844)
.++|++||+.+...++... .....+ .+.+.++++.+.. ..+. +......
T Consensus 79 ~~~I~~nGa~i~~~~~~~l--~~~~l~---~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (285)
T 3pgv_A 79 SYMITSNGARVHDSDGQQI--FAHNLD---RDIAADLFEIVRN-DPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKL 152 (285)
T ss_dssp CEEEEGGGTEEECTTSCEE--EECCCC---HHHHHHHTTTTTT-CTTCEEEEEETTEEEESSCC-----CTTSCCCCEEE
T ss_pred ccEEEcCCeEEECCCCCEE--EecCCC---HHHHHHHHHHHhh-cCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEE
Confidence 4689999999985333321 112233 2334455442211 1111 1100000
Q ss_pred ----------eEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhcccCc
Q 003145 717 ----------SLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKK 785 (844)
Q Consensus 717 ----------sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~ 785 (844)
...+-+...+++ ...++.+.+ ...+. ..+.++ ++..++||.|+++|||.|+++|++++|
T Consensus 153 ~~~~~~~~~~i~ki~~~~~~~~----~~~~~~~~l-~~~~~-~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lg---- 222 (285)
T 3pgv_A 153 YEPGELDPQGISKVFFTCEDHE----HLLPLEQAM-NARWG-DRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLG---- 222 (285)
T ss_dssp CCTTCSCCSSEEEEEEECSCHH----HHHHHHHHH-HHHHG-GGEEEEESSTTEEEEEETTCSHHHHHHHHHHHTT----
T ss_pred ecHHHcCCCCceEEEEeCCCHH----HHHHHHHHH-HHHhc-CCEEEEEeCCceEEEecCCCChHHHHHHHHHHhC----
Confidence 000001111222 122333333 11111 125544 568899999999999999999999999
Q ss_pred CCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcchhh-----hcCCHH--HHHHHHHHH
Q 003145 786 MKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSLSKE-----KKRKVH--QLFGIFLRF 837 (844)
Q Consensus 786 ~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~a~~-----~l~~~~--~v~~~l~~~ 837 (844)
+++++++|||| +.|| ||+ |++|+||||.+++.+. ...+.+ -|..+|+++
T Consensus 223 --i~~~~~ia~GD-~~NDi~ml~~ag~~vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~~~ 282 (285)
T 3pgv_A 223 --YTLSDCIAFGD-GMNDAEMLSMAGKGCIMANAHQRLKDLHPELEVIGSNADDAVPRYLRKL 282 (285)
T ss_dssp --CCGGGEEEEEC-SGGGHHHHHHSSEEEECTTSCHHHHHHCTTSEECCCGGGTHHHHHHHHH
T ss_pred --CCHHHEEEECC-cHhhHHHHHhcCCEEEccCCCHHHHHhCCCCEecccCCcchHHHHHHHH
Confidence 78999999999 9999 999 9999999998765443 123333 366676665
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.3e-21 Score=210.52 Aligned_cols=214 Identities=12% Similarity=0.239 Sum_probs=151.9
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChh-HHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC--ceEEe
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPD-LKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAA 666 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~-~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--l~lia 666 (844)
..|+|+||+||||++. ...++++ ++++|++|.+ .|+.|+++|||+...+.+++..++ .++|+
T Consensus 36 ~iKli~fDlDGTLld~--------------~~~i~~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~ 100 (304)
T 3l7y_A 36 SVKVIATDMDGTFLNS--------------KGSYDHNRFQRILKQLQE-RDIRFVVASSNPYRQLREHFPDCHEQLTFVG 100 (304)
T ss_dssp CCSEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHHH-TTCEEEEECSSCHHHHHTTCTTTGGGSEEEE
T ss_pred eeEEEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHhCCCCcEEe
Confidence 5799999999999987 3457888 8999999998 599999999999999999998874 58999
Q ss_pred ecceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCC----------ceEeec----------------------
Q 003145 667 ENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPR----------SHFEQR---------------------- 714 (844)
Q Consensus 667 enG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~g----------s~iE~k---------------------- 714 (844)
+||+.+...+..... ...+. +.+.++++.+.++.++ .++...
T Consensus 101 ~nGa~i~~~~~~i~~---~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 174 (304)
T 3l7y_A 101 ENGANIISKNQSLIE---VFQQR---EDIASIIYFIEEKYPQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSF 174 (304)
T ss_dssp GGGTEEEETTEEEEE---CCCCH---HHHHHHHHHHHHHCTTSEEEEEESSCEEEETTSCHHHHHHHTTSCSSEEEESCC
T ss_pred CCCcEEEECCEEEEE---ecCCH---HHHHHHHHHHHHhcCCeEEEEEcCCCEeeeCCCCHHHHHHHHHHhccceecCCH
Confidence 999999754333211 12332 3344555554432211 111100
Q ss_pred -------cceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhcccCcC
Q 003145 715 -------ETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKM 786 (844)
Q Consensus 715 -------~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~ 786 (844)
-..+.+.. +++ ...++.+.+ ...+.+..+.++ .+..++||.|+++|||.|++++++++|
T Consensus 175 ~~~~~~~~~ki~~~~---~~~----~~~~~~~~l-~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lg----- 241 (304)
T 3l7y_A 175 SPLPDERFFKLTLQV---KEE----ESAQIMKAI-ADYKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRWN----- 241 (304)
T ss_dssp SSCC-CCEEEEEEEC---CGG----GHHHHHHHH-HTSTTTTTEEEEECSTTEEEEEETTCSHHHHHHHHHHHTT-----
T ss_pred HHcCcCCeEEEEEEc---CHH----HHHHHHHHH-HHhcCCCeEEEEEcCCceEEEEcCCCCHHHHHHHHHHHhC-----
Confidence 00111111 111 134555666 433333236655 467899999999999999999999999
Q ss_pred CCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcc---hhhhcCCHHH--HHHHHHHHhh
Q 003145 787 KTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSL---SKEKKRKVHQ--LFGIFLRFSY 839 (844)
Q Consensus 787 ~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~---a~~~l~~~~~--v~~~l~~~~~ 839 (844)
++++++++||| +.|| |++ |++|+||||.+++ |++...+.++ |..+|+++..
T Consensus 242 -i~~~e~i~~GD-s~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~~~~ 301 (304)
T 3l7y_A 242 -FTSDHLMAFGD-GGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVIDNYLA 301 (304)
T ss_dssp -CCGGGEEEEEC-SGGGHHHHHHCTEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHHH
T ss_pred -cCHHHEEEECC-CHHHHHHHHhcCCeEEcCCcCHHHHHhccEEcCCCCcchHHHHHHHHHH
Confidence 78999999999 9999 998 9999999998654 5556777777 8888877653
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.87 E-value=6.1e-21 Score=192.93 Aligned_cols=190 Identities=22% Similarity=0.243 Sum_probs=150.4
Q ss_pred EecccChhHHh--hhhcCCchHHHHHHHHHHhC--CCcEEEEEeccc-ccCCHHHHHHHHHHHH--HhCcCCCCceEEEE
Q 003145 331 FPIGIDSERFI--RALEINPVQVHIKELQETFA--GRKVMLGVDRLD-MIKGIPQKLLAFEKFL--EENSDWRGKVVLLQ 403 (844)
Q Consensus 331 ~P~GID~~~f~--~~~~~~~~~~~~~~lr~~~~--~~~vil~VdRld-~~KGi~~~l~Af~~ll--~~~P~~~~~v~Lv~ 403 (844)
+|+|||++.|. +.. ....+....++++++ ++++|+++||+. +.||+..+++|+..+. +++|+ +.|++
T Consensus 2 ipngvd~~~f~~~~~~--~~~~~~~~~~r~~~~~~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~----~~l~i 75 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLT--GSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE----MRFII 75 (200)
T ss_dssp ---CCCTTTSSGGGSC--SCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGG----EEEEE
T ss_pred CCCccChhhccccccc--cchhhHHHHHHHHcCCCCCCEEEEeeccccccCCHHHHHHHHHHHHhhccCCC----eEEEE
Confidence 69999999997 532 112223456777774 677999999999 9999999999999987 77775 45887
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcc
Q 003145 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (844)
Q Consensus 404 i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~ 483 (844)
+|.+ . + +...++.+++.+.+ .|+++.|.++.+++..+|+.||++|+||..||||++++||||||
T Consensus 76 ~G~~---~-~---~~~~~l~~~~~~~~---------~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G 139 (200)
T 2bfw_A 76 IGKG---D-P---ELEGWARSLEEKHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG 139 (200)
T ss_dssp ECCB---C-H---HHHHHHHHHHHHCT---------TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTT
T ss_pred ECCC---C-h---HHHHHHHHHHHhcC---------CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCC
Confidence 7642 1 1 12344555555433 36643899999999999999999999999999999999999996
Q ss_pred cCCCceEEEeCCCCchhhc-cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Q 003145 484 DLKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTH 546 (844)
Q Consensus 484 ~~~~g~lVlSe~~G~~~~l-g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 546 (844)
.|+|+|..+|..+.+ +.+|++++|.|+++++++|.++++|.++++.++.+++++++++|
T Consensus 140 ----~PvI~~~~~~~~e~~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~f 199 (200)
T 2bfw_A 140 ----AIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSF 199 (200)
T ss_dssp ----CEEEEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHT
T ss_pred ----CCEEEeCCCChHHHcCCCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc
Confidence 899999999988888 77899999999999999999999977778888888888887654
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=5e-21 Score=205.66 Aligned_cols=216 Identities=14% Similarity=0.243 Sum_probs=149.4
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc--eEEee
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAE 667 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l--~liae 667 (844)
+.|+|+||+||||++. ...++++++++|++|.+ .|+.|+++|||+...+..++..+++ ++|++
T Consensus 5 ~~kli~fDlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~~~~~~~~i~~ 69 (290)
T 3dnp_A 5 SKQLLALNIDGALLRS--------------NGKIHQATKDAIEYVKK-KGIYVTLVTNRHFRSAQKIAKSLKLDAKLITH 69 (290)
T ss_dssp -CCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEBCSSCHHHHHHHHHHTTCCSCEEEG
T ss_pred cceEEEEcCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCCCCeEEEc
Confidence 4789999999999987 35689999999999988 5999999999999999998888753 79999
Q ss_pred cceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceE-------------------------EEEe
Q 003145 668 NGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSL-------------------------VWNY 722 (844)
Q Consensus 668 nG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl-------------------------~~hy 722 (844)
||+.+....+.+. .....+ .+.+.++++.+.+......+....... ...+
T Consensus 70 nGa~i~~~~~~~~--~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (290)
T 3dnp_A 70 SGAYIAEKIDAPF--FEKRIS---DDHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFV 144 (290)
T ss_dssp GGTEEESSTTSCS--EECCCC---HHHHHHHHHHHHTSSCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEEC
T ss_pred CCeEEEcCCCCEE--EecCCC---HHHHHHHHHHHHHcCceEEEEECCcEEeeccccchhhhhhhhcccccccccccccc
Confidence 9999985333321 111233 445666776665431111111110000 0000
Q ss_pred e------------------cCChhhhHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhccc
Q 003145 723 K------------------YADVEFGRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHS 783 (844)
Q Consensus 723 ~------------------~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~ 783 (844)
. ..+++ ...++.+.+ .... ..+.++ ++..++||.|+++|||.|++.+++++|
T Consensus 145 ~~~~~~~~~~~~~~~ki~~~~~~~----~~~~~~~~l-~~~~--~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lg-- 215 (290)
T 3dnp_A 145 ESLSDLLMDEPVSAPVIEVYTEHD----IQHDITETI-TKAF--PAVDVIRVNDEKLNIVPKGVSKEAGLALVASELG-- 215 (290)
T ss_dssp SCHHHHHHHSCCCCSEEEEECCGG----GHHHHHHHH-HHHC--TTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTT--
T ss_pred CCHHHHHhcCCCCceEEEEeCCHH----HHHHHHHHH-HhhC--CcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcC--
Confidence 0 00111 112233332 1111 235554 578999999999999999999999999
Q ss_pred CcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcc---hhhhcCCHHH--HHHHHHHHhh
Q 003145 784 KKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSL---SKEKKRKVHQ--LFGIFLRFSY 839 (844)
Q Consensus 784 ~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~---a~~~l~~~~~--v~~~l~~~~~ 839 (844)
++++++++||| +.|| |++ |++|+||||.+++ |++...+.++ |..+|+++..
T Consensus 216 ----i~~~~~i~~GD-~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~~~~~ 275 (290)
T 3dnp_A 216 ----LSMDDVVAIGH-QYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMKEYFR 275 (290)
T ss_dssp ----CCGGGEEEEEC-SGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCTTTTHHHHHHHHHHH
T ss_pred ----CCHHHEEEECC-chhhHHHHHhcCCEEEecCCcHHHHHhcCEECCCCCccHHHHHHHHHHH
Confidence 78999999999 9999 998 9999999998754 4556677666 8888877653
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-21 Score=213.58 Aligned_cols=239 Identities=14% Similarity=0.011 Sum_probs=182.0
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHh
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (844)
..|+|++|.++..++. .+..+.| .+++|..++... .+|.|.+.+....+.+.+
T Consensus 84 ~~Dvi~~~~~~~~~~~----~~~~~~p-v~~~h~~~~~~~----------------~~d~ii~~S~~~~~~~~~------ 136 (342)
T 2iuy_A 84 DVDVVHDHSGGVIGPA----GLPPGTA-FISSHHFTTRPV----------------NPVGCTYSSRAQRAHCGG------ 136 (342)
T ss_dssp CCSEEEECSSSSSCST----TCCTTCE-EEEEECSSSBCS----------------CCTTEEESCHHHHHHTTC------
T ss_pred CCCEEEECCchhhHHH----HhhcCCC-EEEecCCCCCcc----------------cceEEEEcCHHHHHHHhc------
Confidence 5699999997765433 3345788 899999876421 178888877654433221
Q ss_pred CcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHH
Q 003145 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (844)
Q Consensus 311 ~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~ 390 (844)
..++.++|+|||++.|.+... ...++++|+++||+.+.||+..+++|++.+
T Consensus 137 --------------~~~~~vi~ngvd~~~~~~~~~-------------~~~~~~~i~~vG~~~~~Kg~~~li~a~~~~-- 187 (342)
T 2iuy_A 137 --------------GDDAPVIPIPVDPARYRSAAD-------------QVAKEDFLLFMGRVSPHKGALEAAAFAHAC-- 187 (342)
T ss_dssp --------------CTTSCBCCCCBCGGGSCCSTT-------------CCCCCSCEEEESCCCGGGTHHHHHHHHHHH--
T ss_pred --------------CCceEEEcCCCChhhcCcccc-------------cCCCCCEEEEEeccccccCHHHHHHHHHhc--
Confidence 124678999999988765321 123567899999999999999999999886
Q ss_pred hCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCC--
Q 003145 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-- 468 (844)
Q Consensus 391 ~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~-- 468 (844)
+ +.|+++|.+ +.. +.+++++.+++. .|++ .|.++.+++..+|+.||++|+||.
T Consensus 188 ---~----~~l~i~G~g-----~~~----~~l~~~~~~~~~--------~v~~-~g~~~~~~l~~~~~~adv~v~ps~~~ 242 (342)
T 2iuy_A 188 ---G----RRLVLAGPA-----WEP----EYFDEITRRYGS--------TVEP-IGEVGGERRLDLLASAHAVLAMSQAV 242 (342)
T ss_dssp ---T----CCEEEESCC-----CCH----HHHHHHHHHHTT--------TEEE-CCCCCHHHHHHHHHHCSEEEECCCCC
T ss_pred ---C----cEEEEEeCc-----ccH----HHHHHHHHHhCC--------CEEE-eccCCHHHHHHHHHhCCEEEECCccc
Confidence 2 447777642 222 233344444431 3664 899999999999999999999999
Q ss_pred --------CcCCChhHhhhhhcccCCCceEEEeCCCCchhhc----cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHH
Q 003145 469 --------RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----GAGAILVNPWNITEVANAIARALNMSPEEREKRH 536 (844)
Q Consensus 469 --------~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l----g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~ 536 (844)
.||||++++|||||| .|+|+|..+|..+.+ |.+|++++| |+++++++|.++++ .
T Consensus 243 ~~~~~~~~~E~~~~~~~EAma~G----~PvI~s~~~~~~e~~~~~~~~~g~~~~~-d~~~l~~~i~~l~~---------~ 308 (342)
T 2iuy_A 243 TGPWGGIWCEPGATVVSEAAVSG----TPVVGTGNGCLAEIVPSVGEVVGYGTDF-APDEARRTLAGLPA---------S 308 (342)
T ss_dssp CCTTCSCCCCCCCHHHHHHHHTT----CCEEECCTTTHHHHGGGGEEECCSSSCC-CHHHHHHHHHTSCC---------H
T ss_pred ccccccccccCccHHHHHHHhcC----CCEEEcCCCChHHHhcccCCCceEEcCC-CHHHHHHHHHHHHH---------H
Confidence 899999999999996 899999999988888 357999999 99999999999987 3
Q ss_pred HHHHHHH-HhcCHHHHHHHHHHHHHHhHH
Q 003145 537 WHNFTHV-TTHTAQEWAETFVSELNDTVV 564 (844)
Q Consensus 537 ~~~~~~v-~~~~~~~W~~~fl~~l~~~~~ 564 (844)
+++++++ +.+++...++++++.++++..
T Consensus 309 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 337 (342)
T 2iuy_A 309 DEVRRAAVRLWGHVTIAERYVEQYRRLLA 337 (342)
T ss_dssp HHHHHHHHHHHBHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHc
Confidence 3445555 788999999999988887653
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.86 E-value=4.3e-21 Score=204.97 Aligned_cols=219 Identities=13% Similarity=0.134 Sum_probs=144.9
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC-----ceE
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN-----LWL 664 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-----l~l 664 (844)
+.|+|+||+||||++. ...++++++++|++|.+ .|+.|+++|||+...+..++..++ .++
T Consensus 4 ~~kli~fDlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~ 68 (279)
T 4dw8_A 4 KYKLIVLDLDGTLTNS--------------KKEISSRNRETLIRIQE-QGIRLVLASGRPTYGIVPLANELRMNEFGGFI 68 (279)
T ss_dssp CCCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTTGGGTTCEE
T ss_pred cceEEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHHhCCCCCCCEE
Confidence 5799999999999987 35689999999999998 599999999999999999998875 478
Q ss_pred EeecceEEEec-CCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEE----------------EEeecCCh
Q 003145 665 AAENGMFLRCT-TGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLV----------------WNYKYADV 727 (844)
Q Consensus 665 iaenG~~i~~~-~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~----------------~hy~~~d~ 727 (844)
|++||+.+... ++... .....+.+. +.++++.+.+..-...+........ ..+...+
T Consensus 69 i~~nGa~i~~~~~~~~~--~~~~l~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 142 (279)
T 4dw8_A 69 LSYNGGEIINWESKEMM--YENVLPNEV---VPVLYECARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETN- 142 (279)
T ss_dssp EEGGGTEEEETTTCCEE--EECCCCGGG---HHHHHHHHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECS-
T ss_pred EEeCCeEEEECCCCeEE--EEecCCHHH---HHHHHHHHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHH-
Confidence 99999999852 23221 111233222 3344444333211111111000000 0000000
Q ss_pred hh---------------hHHHHHHHHHHHhcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCc
Q 003145 728 EF---------------GRIQARDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAID 791 (844)
Q Consensus 728 e~---------------~~~qa~el~~~L~~~~~~~~~~~v-~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d 791 (844)
++ ......++.+.+ ...+.. .+.+ .++..++||.|+++|||.|++.+++++| ++++
T Consensus 143 ~~~~~~~~~~~ki~~~~~~~~~~~~~~~l-~~~~~~-~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lg------i~~~ 214 (279)
T 4dw8_A 143 DFLTDITLPVAKCLIVGDAGKLIPVESEL-CIRLQG-KINVFRSEPYFLELVPQGIDKALSLSVLLENIG------MTRE 214 (279)
T ss_dssp CHHHHSCSCCSCEEEESCHHHHHHHHHHH-HHHTTT-TCEEEEEETTEEEEECTTCCHHHHHHHHHHHHT------CCGG
T ss_pred HHHHhhcCCceEEEEeCCHHHHHHHHHHH-HHHhcC-CEEEEEcCCcEEEEecCCCChHHHHHHHHHHcC------CCHH
Confidence 00 011223344444 221222 3454 4678999999999999999999999999 7899
Q ss_pred eEEEEeeCCCch--hhc--cCcEEEeCCCCcc---hhhhcCCHHH--HHHHHHHHh
Q 003145 792 YVLCIGHFLGKV--LLT--QFLIQVGSSINSL---SKEKKRKVHQ--LFGIFLRFS 838 (844)
Q Consensus 792 ~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~---a~~~l~~~~~--v~~~l~~~~ 838 (844)
++++||| +.|| |++ |++|+||||.+++ |++...+.++ |..+|+++.
T Consensus 215 ~~i~~GD-~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~ 269 (279)
T 4dw8_A 215 EVIAIGD-GYNDLSMIKFAGMGVAMGNAQEPVKKAADYITLTNDEDGVAEAIERIF 269 (279)
T ss_dssp GEEEEEC-SGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHC
T ss_pred HEEEECC-ChhhHHHHHHcCcEEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHHHHH
Confidence 9999999 9999 998 9999999998754 4445555443 667776654
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=8.7e-22 Score=217.89 Aligned_cols=228 Identities=14% Similarity=0.161 Sum_probs=176.5
Q ss_pred cCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCC
Q 003145 287 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGR 363 (844)
Q Consensus 287 ~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~ 363 (844)
.+|.|.+.+....+.+.+ .++.. ..++.++|+|||.+.|.+....+ ....+++++ .++
T Consensus 136 ~~d~ii~~s~~~~~~~~~----~~~~~-----------~~~~~vi~ngv~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 196 (374)
T 2iw1_A 136 KSTKLMMLTDKQIADFQK----HYQTE-----------PERFQILPPGIYPDRKYSEQIPN----SREIYRQKNGIKEQQ 196 (374)
T ss_dssp CCCEEEESCHHHHHHHHH----HHCCC-----------GGGEEECCCCCCGGGSGGGSCTT----HHHHHHHHTTCCTTC
T ss_pred CCcEEEEcCHHHHHHHHH----HhCCC-----------hhheEEecCCcCHHhcCcccchh----HHHHHHHHhCCCCCC
Confidence 589999988876666543 22221 23688999999999887653221 224566666 367
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHHh-CcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEE
Q 003145 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEE-NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 442 (844)
Q Consensus 364 ~vil~VdRld~~KGi~~~l~Af~~ll~~-~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~ 442 (844)
++|+++||+.+.||+..+++|+..+.++ .|+ +.|+++|.+. . ++ +++++.+.+.. ..|.
T Consensus 197 ~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~----~~l~i~G~g~---~---~~----~~~~~~~~~~~------~~v~ 256 (374)
T 2iw1_A 197 NLLLQVGSDFGRKGVDRSIEALASLPESLRHN----TLLFVVGQDK---P---RK----FEALAEKLGVR------SNVH 256 (374)
T ss_dssp EEEEEECSCTTTTTHHHHHHHHHTSCHHHHHT----EEEEEESSSC---C---HH----HHHHHHHHTCG------GGEE
T ss_pred eEEEEeccchhhcCHHHHHHHHHHhHhccCCc----eEEEEEcCCC---H---HH----HHHHHHHcCCC------CcEE
Confidence 8999999999999999999999988665 454 5588887532 1 22 33344333311 1366
Q ss_pred EeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEEC-CCCHHHHHH
Q 003145 443 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVN-PWNITEVAN 519 (844)
Q Consensus 443 ~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvn-P~d~~~~A~ 519 (844)
+ .|. .+++..+|+.||++|+||..||||++++|||||| .|+|+|..+|..+.+ +.+|++++ |.|++++++
T Consensus 257 ~-~g~--~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G----~Pvi~~~~~~~~e~i~~~~~g~~~~~~~~~~~l~~ 329 (374)
T 2iw1_A 257 F-FSG--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITAG----LPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNE 329 (374)
T ss_dssp E-ESC--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHT----CCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHH
T ss_pred E-CCC--cccHHHHHHhcCEEEeccccCCcccHHHHHHHCC----CCEEEecCCCchhhhccCCceEEeCCCCCHHHHHH
Confidence 5 554 4789999999999999999999999999999996 899999999999888 67899998 999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 003145 520 AIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561 (844)
Q Consensus 520 ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~ 561 (844)
+|.+++++ ++.+.++.+++++++.++++..|++.+.+.++.
T Consensus 330 ~i~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 370 (374)
T 2iw1_A 330 VLRKALTQ-SPLRMAWAENARHYADTQDLYSLPEKAADIITG 370 (374)
T ss_dssp HHHHHHHC-HHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHC
T ss_pred HHHHHHcC-hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99999985 557778888889999999999999988877764
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.8e-21 Score=203.77 Aligned_cols=203 Identities=15% Similarity=0.170 Sum_probs=138.0
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcc-c---CceEE
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE-Y---NLWLA 665 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~-l---~l~li 665 (844)
+.|||++|+||||++. ...++++++++|++|.+ +|+.|+|+|||++..+.+.++. + ..++|
T Consensus 3 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~~l~~l~~-~g~~~~iaTGR~~~~~~~~l~~~~~~~~~~~i 67 (246)
T 3f9r_A 3 KRVLLLFDVDGTLTPP--------------RLCQTDEMRALIKRARG-AGFCVGTVGGSDFAKQVEQLGRDVLTQFDYVF 67 (246)
T ss_dssp CSEEEEECSBTTTBST--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHCTTHHHHCSEEE
T ss_pred CceEEEEeCcCCcCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHhhhhccccCCEEE
Confidence 4799999999999987 35689999999999998 5999999999999998888874 1 24799
Q ss_pred eecceEEEecCCe-eeecccccCChHHHHHHHHHHHHHHh-----cCCCceEeeccceEEEEe--ecCCh----hhhHHH
Q 003145 666 AENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFTE-----RTPRSHFEQRETSLVWNY--KYADV----EFGRIQ 733 (844)
Q Consensus 666 aenG~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~-----rt~gs~iE~k~~sl~~hy--~~~d~----e~~~~q 733 (844)
++||+++...++. |...++...+.++...+.+.++.+.. ...+.|++.+...+.+.. +.... .+....
T Consensus 68 ~~NGa~i~~~~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (246)
T 3f9r_A 68 AENGLLAYRNGLEIHRQSLLNALGNDRIVKFVKKTLRLIADLDIPVQRGTFVEYRNGMINVSPIGRNCSQAERDEFEVYD 147 (246)
T ss_dssp EGGGTEEEETTEEEEECCHHHHTCHHHHHHHHHHHHHHHHTCCCSCCCSCCEEECSSCEEECSSCTTSCHHHHHHHHHHH
T ss_pred ECCCcEEEECCEEEEEeeccccCCHHHHHHHHHHHHhhhhceeeecCCceEEEeecceeccccccccCchhhceeeeEec
Confidence 9999999874332 43322111344444445454443321 134677776655544321 11111 111110
Q ss_pred -----HHHHHHHHhcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCC----Cch
Q 003145 734 -----ARDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL----GKV 803 (844)
Q Consensus 734 -----a~el~~~L~~~~~~~~~~~v-~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~----~nD 803 (844)
..++.+.| ...+.+..+.+ .++..++||+|+|+|||.|+++|++ . +++++|||| + .||
T Consensus 148 ~~~~~~~~~~~~l-~~~~~~~~~~~~~sg~~~leI~~~gv~Kg~al~~L~~--~--------~~ev~afGD-~~~~g~ND 215 (246)
T 3f9r_A 148 NEHRVRASLIAEL-ENSFPDFGLKYSIGGQISFDVFPVGWDKTYCLQFVED--D--------FEEIHFFGD-KTQEGGND 215 (246)
T ss_dssp HHHCHHHHHHHHH-HHHCGGGCEEEEEETTTEEEEEETTCSGGGGGGGTTT--T--------CSEEEEEES-CCSTTSTT
T ss_pred ccchHHHHHHHHH-HhhCcCCcEEEEecCCeEEEEEeCCCCHHHHHHHHHc--C--------cccEEEEeC-CCCCCCCC
Confidence 13344445 33333333654 5688999999999999999999987 3 789999999 6 899
Q ss_pred --hhc---cCcEEEeCCCCcc
Q 003145 804 --LLT---QFLIQVGSSINSL 819 (844)
Q Consensus 804 --Mf~---g~~Iavgna~~~~ 819 (844)
||+ ..+++|+|+.+++
T Consensus 216 i~Ml~~a~~~g~~v~n~~~~~ 236 (246)
T 3f9r_A 216 YEIYTDKRTIGHKVTSYKDTI 236 (246)
T ss_dssp HHHHTCTTSEEEECSSHHHHH
T ss_pred HHHHhCCCccEEEeCCHHHHH
Confidence 999 4688888865543
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=3.1e-21 Score=206.04 Aligned_cols=214 Identities=12% Similarity=0.201 Sum_probs=125.0
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc-----eE
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL-----WL 664 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l-----~l 664 (844)
+.|+|+||+||||++. ...++++++++|++|.+ .|+.|+++|||+...+.++++.+++ ++
T Consensus 4 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~ 68 (279)
T 3mpo_A 4 TIKLIAIDIDGTLLNE--------------KNELAQATIDAVQAAKA-QGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYA 68 (279)
T ss_dssp -CCEEEECC-------------------------CHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTTCCSSSCEE
T ss_pred ceEEEEEcCcCCCCCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEE
Confidence 4789999999999987 35689999999999988 5999999999999999999988753 69
Q ss_pred EeecceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccce---------------------------
Q 003145 665 AAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETS--------------------------- 717 (844)
Q Consensus 665 iaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~s--------------------------- 717 (844)
|++||+.+...++.+... ...+ .+.+.++++.+.+..-...+......
T Consensus 69 i~~nGai~~~~~~~~~~~--~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (279)
T 3mpo_A 69 ITFNGSVAQTISGKVLTN--HSLT---YEDYIDLEAWARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREV 143 (279)
T ss_dssp EEGGGTEEEETTSCEEEE--CCCC---HHHHHHHHHHHHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCG
T ss_pred EEcCcEEEECCCCCEEEe--cCCC---HHHHHHHHHHHHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCH
Confidence 999999443433332211 1233 23445555554433111111111000
Q ss_pred ---------EEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCC
Q 003145 718 ---------LVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMK 787 (844)
Q Consensus 718 ---------l~~hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~ 787 (844)
..+.+. .++ ....++.+.+ ...+.. .+.++ ++..++||.|+++|||.|++.++++++
T Consensus 144 ~~~~~~~~~~ki~~~-~~~----~~~~~~~~~l-~~~~~~-~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lg------ 210 (279)
T 3mpo_A 144 SETPRDLTISKAMFV-DYP----QVIEQVKANM-PQDFKD-RFSVVQSAPYFIEVMNRRASKGGTLSELVDQLG------ 210 (279)
T ss_dssp GGSCTTCCCCEEEEE-CCH----HHHHHHHHHC-CHHHHH-HEEEECCSSSEEEEEESSCCHHHHHHHHHHHTT------
T ss_pred HHhhccCCcEEEEEc-CCH----HHHHHHHHHH-HHHhCC-CEEEEEecCceEEEecCCCChHHHHHHHHHHcC------
Confidence 000000 011 1122333333 111111 24554 578899999999999999999999999
Q ss_pred CCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcc---hhhhcCCHHH--HHHHHHHH
Q 003145 788 TAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSL---SKEKKRKVHQ--LFGIFLRF 837 (844)
Q Consensus 788 ~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~---a~~~l~~~~~--v~~~l~~~ 837 (844)
++++++++||| +.|| |++ |++|+||||.+++ |++...+.++ |..+|+++
T Consensus 211 i~~~~~i~~GD-~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~ 268 (279)
T 3mpo_A 211 LTADDVMTLGD-QGNDLTMIKYAGLGVAMGNAIDEVKEAAQAVTLTNAENGVAAAIRKY 268 (279)
T ss_dssp CCGGGEEEC---CCTTHHHHHHSTEECBC---CCHHHHHCSCBC------CHHHHHC--
T ss_pred CCHHHEEEECC-chhhHHHHHhcCceeeccCCCHHHHHhcceeccCCCccHHHHHHHHH
Confidence 78999999999 9999 998 9999999998765 4444444433 55565554
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=4.5e-21 Score=203.88 Aligned_cols=209 Identities=19% Similarity=0.237 Sum_probs=129.9
Q ss_pred HHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcc---
Q 003145 583 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE--- 659 (844)
Q Consensus 583 ~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~--- 659 (844)
..+|+..+.|||++|+||||++. ...++++++++|++|++ . +.|+|+|||++..+.+.++.
T Consensus 5 ~~~~~~~~~kli~~DlDGTLl~~--------------~~~is~~~~~al~~l~~-~-i~v~iaTGR~~~~~~~~l~~~~~ 68 (262)
T 2fue_A 5 AQAARRKERVLCLFDVDGTLTPA--------------RQKIDPEVAAFLQKLRS-R-VQIGVVGGSDYCKIAEQLGDGDE 68 (262)
T ss_dssp --------CEEEEEESBTTTBST--------------TSCCCHHHHHHHHHHTT-T-SEEEEECSSCHHHHHHHHSSTTT
T ss_pred cccccccCeEEEEEeCccCCCCC--------------CCcCCHHHHHHHHHHHh-C-CEEEEEcCCCHHHHHHHHhhhhc
Confidence 34677778999999999999986 35689999999999976 5 99999999999999888875
Q ss_pred -c--CceEEeecceEEEecCCe-eeecccccCChHHHHHHHHHHHHHHhc--------CCCceEeeccceEEEE-e-ecC
Q 003145 660 -Y--NLWLAAENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFTER--------TPRSHFEQRETSLVWN-Y-KYA 725 (844)
Q Consensus 660 -l--~l~liaenG~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~r--------t~gs~iE~k~~sl~~h-y-~~~ 725 (844)
+ ..++|++||+++...++. |...++...+ .+.+.++++...+. ..+.+++.+...+.+. + +..
T Consensus 69 ~~~~~~~~I~~NGa~i~~~~~~i~~~~~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (262)
T 2fue_A 69 VIEKFDYVFAENGTVQYKHGRLLSKQTIQNHLG---EELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSC 145 (262)
T ss_dssp HHHHCSEEEEGGGTEEEETTEECCCCCHHHHHC---HHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTC
T ss_pred ccccCCeEEECCCcEEEeCCeEEEEeeccccCC---HHHHHHHHHHHHHcCceEEEEeCCeEEEechHHhhhHHhhcCCC
Confidence 2 247899999999863321 2111000012 33444444433221 2334444332222211 1 111
Q ss_pred Chh----hhHH-----HHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEE
Q 003145 726 DVE----FGRI-----QARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLC 795 (844)
Q Consensus 726 d~e----~~~~-----qa~el~~~L~~~~~~~~~~~v~~-g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vla 795 (844)
+.+ +... ...++.+.+ ...+....+.+.. +..++||.|+++|||.||+.| ++ +++++++|
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~s~~~~leI~~~~vsKg~al~~l---~g------i~~~~via 215 (262)
T 2fue_A 146 TLEERIEFSELDKKEKIREKFVEAL-KTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSL---DQ------DSFDTIHF 215 (262)
T ss_dssp CHHHHHHHHHHHHHHCHHHHHHHHH-HHHTTTSCEEEECCSSSCEEEEETTCSTTHHHHHH---TT------SCCSEEEE
T ss_pred cccccccEEEEcCCHHHHHHHHHHH-HHhCCCceEEEEECCCcEEEEecCCCCHHHHHHHH---HC------CCHHHEEE
Confidence 111 1000 112333444 2222222466654 677999999999999999999 67 78999999
Q ss_pred EeeC---CCch--hhc--c-CcEEEeCCCCcch
Q 003145 796 IGHF---LGKV--LLT--Q-FLIQVGSSINSLS 820 (844)
Q Consensus 796 iGD~---~~nD--Mf~--g-~~Iavgna~~~~a 820 (844)
|||+ +.|| ||+ + .+++||||.+++.
T Consensus 216 fGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k 248 (262)
T 2fue_A 216 FGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQ 248 (262)
T ss_dssp EESCCSTTSTTHHHHHSTTSEEEECSSHHHHHH
T ss_pred ECCCCCCCCCCHHHHhcCccCcEEecCCCHHHH
Confidence 9995 5788 999 4 4999999976543
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=99.85 E-value=4.3e-21 Score=201.86 Aligned_cols=207 Identities=16% Similarity=0.200 Sum_probs=130.1
Q ss_pred hcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcc-c---Cce
Q 003145 588 RSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE-Y---NLW 663 (844)
Q Consensus 588 ~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~-l---~l~ 663 (844)
..+.|||++|+||||++. +..++++++++|++|++ . +.|+|+|||+...+.+.++. + ..+
T Consensus 3 ~~~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~-i~v~iaTGR~~~~~~~~l~~~~~~~~~~ 66 (246)
T 2amy_A 3 APGPALCLFDVDGTLTAP--------------RQKITKEMDDFLQKLRQ-K-IKIGVVGGSDFEKVQEQLGNDVVEKYDY 66 (246)
T ss_dssp -CCSEEEEEESBTTTBCT--------------TSCCCHHHHHHHHHHTT-T-SEEEEECSSCHHHHHHHHCTTHHHHCSE
T ss_pred CCCceEEEEECCCCcCCC--------------CcccCHHHHHHHHHHHh-C-CeEEEEcCCCHHHHHHHhccccccccCE
Confidence 356899999999999986 35689999999999987 5 99999999999888777762 2 237
Q ss_pred EEeecceEEEecCCe-eeecccccCChHHHHHHHHHHHHHH-----hcCCCceEeeccceEEEEe--ecCCh----hhhH
Q 003145 664 LAAENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFT-----ERTPRSHFEQRETSLVWNY--KYADV----EFGR 731 (844)
Q Consensus 664 liaenG~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~-----~rt~gs~iE~k~~sl~~hy--~~~d~----e~~~ 731 (844)
+|++||+++...++. |...++...+.+....+.+.++.+. ....+.+++.+.....++. +.... .+..
T Consensus 67 ~I~~NGa~i~~~~~~i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (246)
T 2amy_A 67 VFPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYE 146 (246)
T ss_dssp EESGGGTEEEETTEEEEECCHHHHHCHHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHH
T ss_pred EEECCCcEEEeCCcEEEeeecccccCHHHHHHHHHHHHhcCceEEEecCCceeEecccceeehhhhcCcCchhhhhhhee
Confidence 899999999864332 3221100013233333333333221 1123445443332222211 11110 1110
Q ss_pred H-----HHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeC---CCc
Q 003145 732 I-----QARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF---LGK 802 (844)
Q Consensus 732 ~-----qa~el~~~L~~~~~~~~~~~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~---~~n 802 (844)
. ...++.+.+ ...+....+.+. ++..++||.|+++|||.|+++| ++ +++++++||||+ +.|
T Consensus 147 ~~~~~~~~~~~~~~l-~~~~~~~~~~~~~s~~~~leI~~~~~~Kg~al~~l---~~------i~~~~viafGD~~~~~~N 216 (246)
T 2amy_A 147 LDKKENIRQKFVADL-RKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHV---EN------DGYKTIYFFGDKTMPGGN 216 (246)
T ss_dssp HHHHHCHHHHHHHHH-HHHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGT---TT------SCCSEEEEEECSCC---C
T ss_pred ecCCHHHHHHHHHHH-HHhcCCCcEEEEEcCCcEEEEecCCCchHHHHHHH---hC------CCHHHEEEECCCCCCCCC
Confidence 0 012333444 222222246665 4778999999999999999999 67 789999999994 567
Q ss_pred h--hhc--cC-cEEEeCCCCcch
Q 003145 803 V--LLT--QF-LIQVGSSINSLS 820 (844)
Q Consensus 803 D--Mf~--g~-~Iavgna~~~~a 820 (844)
| ||+ |+ +++||||.+++.
T Consensus 217 D~~Ml~~a~~ag~av~Na~~~vk 239 (246)
T 2amy_A 217 DHEIFTDPRTMGYSVTAPEDTRR 239 (246)
T ss_dssp CCHHHHCTTEEEEECSSHHHHHH
T ss_pred cHHHHHhCCcceEEeeCCCHHHH
Confidence 7 999 45 999999987654
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2.9e-20 Score=198.34 Aligned_cols=215 Identities=14% Similarity=0.198 Sum_probs=147.0
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhH-HHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC--ceEEe
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDL-KQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAA 666 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~-~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--l~lia 666 (844)
+.|||++|+||||++. ...+++++ +++|++|.+ .|+.|+|+|||++..+.++++.++ .++|+
T Consensus 2 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~ 66 (271)
T 1rlm_A 2 AVKVIVTDMDGTFLND--------------AKTYNQPRFMAQYQELKK-RGIKFVVASGNQYYQLISFFPELKDEISFVA 66 (271)
T ss_dssp CCCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHHH-HTCEEEEECSSCHHHHGGGCTTTTTTSEEEE
T ss_pred CccEEEEeCCCCCCCC--------------CCcCCHHHHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHhcCCCCEEEE
Confidence 3689999999999986 34588885 999999987 699999999999999999888773 58999
Q ss_pred ecceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcC---------CCceEeecc-----------c-eEE------
Q 003145 667 ENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERT---------PRSHFEQRE-----------T-SLV------ 719 (844)
Q Consensus 667 enG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt---------~gs~iE~k~-----------~-sl~------ 719 (844)
+||+.+...++.... ...+ .+.+.++++.+.+.. .+.+..... . .+.
T Consensus 67 ~NGa~i~~~~~~i~~---~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (271)
T 1rlm_A 67 ENGALVYEHGKQLFH---GELT---RHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQ 140 (271)
T ss_dssp GGGTEEEETTEEEEE---CCCC---HHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGG
T ss_pred CCccEEEECCeEEEE---ecCC---HHHHHHHHHHHHhCCCccEEEEeCCCEEeeCCCCHHHHHHHHHhCCCCEEeCchh
Confidence 999998864332111 1233 344555665554321 122221100 0 000
Q ss_pred --------EEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCC
Q 003145 720 --------WNYKYADVEFGRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAI 790 (844)
Q Consensus 720 --------~hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~ 790 (844)
+.... ++ ....++.+.+ ...+.. .+.++ ++..++||.|++++||.++++++++++ +++
T Consensus 141 ~~~~~~~ki~i~~-~~----~~~~~~~~~l-~~~~~~-~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~------i~~ 207 (271)
T 1rlm_A 141 EIDDVLFKFSLNL-PD----EQIPLVIDKL-HVALDG-IMKPVTSGFGFIDLIIPGLHKANGISRLLKRWD------LSP 207 (271)
T ss_dssp GCCSCEEEEEEEC-CG----GGHHHHHHHH-HHHTTT-SSEEEECSTTEEEEECTTCSHHHHHHHHHHHHT------CCG
T ss_pred hCCCceEEEEEEc-CH----HHHHHHHHHH-HHHcCC-cEEEEeccCCeEEEEcCCCChHHHHHHHHHHhC------CCH
Confidence 00000 11 1133444444 221221 34554 567899999999999999999999999 788
Q ss_pred ceEEEEeeCCCch--hhc--cCcEEEeCCCCcc---hhhhcCCHHH--HHHHHHHHhh
Q 003145 791 DYVLCIGHFLGKV--LLT--QFLIQVGSSINSL---SKEKKRKVHQ--LFGIFLRFSY 839 (844)
Q Consensus 791 d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~---a~~~l~~~~~--v~~~l~~~~~ 839 (844)
+.+++||| +.|| |++ |++|+|||+.+++ |.+...+.++ |..+|+++..
T Consensus 208 ~~~~~~GD-~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~~~~~ 264 (271)
T 1rlm_A 208 QNVVAIGD-SGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLD 264 (271)
T ss_dssp GGEEEEEC-SGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHH
T ss_pred HHEEEECC-cHHHHHHHHHcCCeEEeCCccHHHHHhCCeeCcCCCCChHHHHHHHHHh
Confidence 99999999 9999 888 8999999997653 5556666655 7777777653
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.4e-20 Score=201.67 Aligned_cols=210 Identities=15% Similarity=0.132 Sum_probs=128.6
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc---eEEe
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL---WLAA 666 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l---~lia 666 (844)
+.|||++|+||||++.. ..++++++++|++|.+ .|+.|+|+|||++..+..++..+++ ++|+
T Consensus 8 ~~~li~~DlDGTLl~~~--------------~~~~~~~~~~l~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~ 72 (275)
T 1xvi_A 8 QPLLVFSDLDGTLLDSH--------------SYDWQPAAPWLTRLRE-ANVPVILCSSKTSAEMLYLQKTLGLQGLPLIA 72 (275)
T ss_dssp CCEEEEEECTTTTSCSS--------------CCSCCTTHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHTTCTTSCEEE
T ss_pred CceEEEEeCCCCCCCCC--------------CcCCHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEE
Confidence 57999999999999862 3456778999999987 5999999999999999999988753 6999
Q ss_pred ecceEEE-ecCCe-------eeecccccCChHHHHHHHHHHHHHHhcCCCceEee------------------------c
Q 003145 667 ENGMFLR-CTTGK-------WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQ------------------------R 714 (844)
Q Consensus 667 enG~~i~-~~~~~-------w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~------------------------k 714 (844)
+||+++. ..++. |... .+. +.+.++++.+.......+... +
T Consensus 73 ~NGa~i~~~~~~~~~~~~~~~~~~----l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (275)
T 1xvi_A 73 ENGAVIQLAEQWQEIDGFPRIISG----ISH---GEISLVLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLH 145 (275)
T ss_dssp GGGTEEECCTTCTTSTTTTEEECS----SCH---HHHHHHHHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCC
T ss_pred eCCCeEEecCcccccCceEEEecC----CCH---HHHHHHHHHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHhh
Confidence 9999997 32111 3222 332 333444443322111111000 0
Q ss_pred cceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhc-ccCcCCCCCce-
Q 003145 715 ETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIV-HSKKMKTAIDY- 792 (844)
Q Consensus 715 ~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~-~~~~~~~~~d~- 792 (844)
.....+.+. .+++ ...++.+.+ .. ..+.++.+..++||.|++++||.|++.++++++ . +++.
T Consensus 146 ~~~~~~~~~-~~~~----~~~~~~~~l-~~----~~~~~~~~~~~leI~~~~~~K~~~l~~l~~~~~~~------~~~~~ 209 (275)
T 1xvi_A 146 EASVTLIWR-DSDE----RMAQFTARL-NE----LGLQFMQGARFWHVLDASAGKDQAANWIIATYQQL------SGKRP 209 (275)
T ss_dssp SSCEEEEEC-SCHH----HHHHHHHHH-HH----TTEEEEECSSCEEEEETTCCHHHHHHHHHHHHHHH------HSSCC
T ss_pred ccCceeEec-CCHH----HHHHHHHHH-Hh----hCeEEEECCceEEEecCCCCHHHHHHHHHHHhhhc------ccccC
Confidence 111112221 1211 123344444 22 146777777899999999999999999999987 4 3567
Q ss_pred -EEEEeeCCCch--hhc--cCcEEEeCCC---Ccc-----hh-hhcCCHH--HHHHHHHHHh
Q 003145 793 -VLCIGHFLGKV--LLT--QFLIQVGSSI---NSL-----SK-EKKRKVH--QLFGIFLRFS 838 (844)
Q Consensus 793 -vlaiGD~~~nD--Mf~--g~~Iavgna~---~~~-----a~-~~l~~~~--~v~~~l~~~~ 838 (844)
+++||| +.|| ||+ +++|+|||+. +++ |. +...+.+ -|..+|+++.
T Consensus 210 ~~~~~GD-~~nD~~m~~~ag~~va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l~~~l 270 (275)
T 1xvi_A 210 TTLGLGD-GPNDAPLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLDHFF 270 (275)
T ss_dssp EEEEEES-SGGGHHHHHTSSEEEECCCCC---------------------------------
T ss_pred cEEEECC-ChhhHHHHHhCCceEEecCCCccchhhccccCCceeEccCCCchHHHHHHHHHH
Confidence 999999 9999 998 8999999997 555 34 4443333 2555555543
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.84 E-value=4.2e-20 Score=198.45 Aligned_cols=222 Identities=13% Similarity=0.194 Sum_probs=146.3
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc-----eEE
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL-----WLA 665 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l-----~li 665 (844)
.|||++|+||||++. ...++++++++|++|.+ .|+.|+|+|||++..+..+++.+++ ++|
T Consensus 5 ~kli~~DlDGTLl~~--------------~~~i~~~~~~aL~~l~~-~Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I 69 (282)
T 1rkq_A 5 IKLIAIDMDGTLLLP--------------DHTISPAVKNAIAAARA-RGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCI 69 (282)
T ss_dssp CCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEE
T ss_pred ceEEEEeCCCCCCCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEE
Confidence 689999999999986 35689999999999998 5999999999999999999988754 689
Q ss_pred eecceEEEe-cCCeeeecccccCChHHHHHHHHHHHHHHh----cCC-CceEeeccc-----------eEEEEeecCC--
Q 003145 666 AENGMFLRC-TTGKWMTTMPEHLNMEWVDSLKHVFEYFTE----RTP-RSHFEQRET-----------SLVWNYKYAD-- 726 (844)
Q Consensus 666 aenG~~i~~-~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~----rt~-gs~iE~k~~-----------sl~~hy~~~d-- 726 (844)
++||+++.. .+++. +.....+.++...+.+.++.+.- .+. +.+.+.+.. .+.......+
T Consensus 70 ~~NGa~i~~~~~~~~--i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (282)
T 1rkq_A 70 TYNGALVQKAADGST--VAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKM 147 (282)
T ss_dssp EGGGTEEEETTTCCE--EEECCBCHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGS
T ss_pred EeCCeEEEECCCCeE--EEEecCCHHHHHHHHHHHHHcCCEEEEEECCEEEEcCCchhHHHHHHhhhccCCccccchhHh
Confidence 999999986 23332 11123454454444444443210 011 122221100 0000000000
Q ss_pred ---hhh-------hHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEE
Q 003145 727 ---VEF-------GRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLC 795 (844)
Q Consensus 727 ---~e~-------~~~qa~el~~~L~~~~~~~~~~~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vla 795 (844)
.+. ......++.+.+ ...+. ..+.++ ++..++||.|++++||.|++.++++++ ++++.+++
T Consensus 148 ~~~~~~~ki~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~------~~~~~~~~ 219 (282)
T 1rkq_A 148 DPNTQFLKVMMIDEPAILDQAIARI-PQEVK-EKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLG------IKPEEIMA 219 (282)
T ss_dssp CTTCCBCEEEEECCHHHHHHHHHHS-CHHHH-HHEEEEEEETTEEEEEETTCSHHHHHHHHHHHHT------CCGGGEEE
T ss_pred cccCCceEEEEECCHHHHHHHHHHH-HHHhc-CCEEEEEeCCceEEecCCCCCCHHHHHHHHHHhC------CCHHHEEE
Confidence 000 011122333333 11010 135554 678899999999999999999999998 78899999
Q ss_pred EeeCCCch--hhc--cCcEEEeCCCCc---chhhhcCCHHH--HHHHHHHHh
Q 003145 796 IGHFLGKV--LLT--QFLIQVGSSINS---LSKEKKRKVHQ--LFGIFLRFS 838 (844)
Q Consensus 796 iGD~~~nD--Mf~--g~~Iavgna~~~---~a~~~l~~~~~--v~~~l~~~~ 838 (844)
||| +.|| |++ +++|+|||+.++ .|.+...+.++ |..+|+++.
T Consensus 220 ~GD-~~nD~~m~~~ag~~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~~~~ 270 (282)
T 1rkq_A 220 IGD-QENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKYV 270 (282)
T ss_dssp EEC-SGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHHHHT
T ss_pred ECC-cHHHHHHHHHCCcEEEecCCcHHHHhhCCEEecCCCcchHHHHHHHHH
Confidence 999 9999 888 899999999764 45566666554 778887764
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.83 E-value=4.5e-20 Score=196.03 Aligned_cols=205 Identities=16% Similarity=0.243 Sum_probs=141.6
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc-eEEeecc
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL-WLAAENG 669 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l-~liaenG 669 (844)
.|+|+||+||||++.. ..++++++++|++|.+ +|+.|+++|||+...+.+++..+++ ++|++||
T Consensus 5 ~kli~fDlDGTLl~~~--------------~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~~~~~~~i~~nG 69 (274)
T 3fzq_A 5 YKLLILDIDGTLRDEV--------------YGIPESAKHAIRLCQK-NHCSVVICTGRSMGTIQDDVLSLGVDGYIAGGG 69 (274)
T ss_dssp CCEEEECSBTTTBBTT--------------TBCCHHHHHHHHHHHH-TTCEEEEECSSCTTTSCHHHHTTCCSEEEETTT
T ss_pred ceEEEEECCCCCCCCC--------------CcCCHHHHHHHHHHHH-CCCEEEEEeCCChHHHHHHHHHcCCCEEEecCc
Confidence 6899999999999873 4589999999999987 6999999999999999988888743 5899999
Q ss_pred eEEEecCCe-eeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccc--------------------------------
Q 003145 670 MFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRET-------------------------------- 716 (844)
Q Consensus 670 ~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~-------------------------------- 716 (844)
+++...++. +.. ..+. +.+.++++.+.+......+.....
T Consensus 70 a~i~~~~~~~~~~----~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (274)
T 3fzq_A 70 NYIQYHGELLYNQ----SFNQ---RLIKEVVCLLKKREVAFSIESQEKVFMNQKAKEIFETMNQLKGTNSCINKQHIQEK 142 (274)
T ss_dssp TEEEETTEEEEEC----CCCH---HHHHHHHHHHHHHTCEEEEECSSCEEECHHHHHHHHHHHHTTTSCCTTHHHHCCSS
T ss_pred cEEEECCEEEEEc----CCCH---HHHHHHHHHHHHCCceEEEEeCCceEeCCchHHHHHHHHhhhccchhhhhhhhhhh
Confidence 999854332 222 2333 334444444433211111111000
Q ss_pred ----------------eEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEE-EEcC--cEEEEEeCCCCHHHHHHHHH
Q 003145 717 ----------------SLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEV-VQGS--KSVEVRAVGVTKGAAIDRIL 777 (844)
Q Consensus 717 ----------------sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v-~~g~--~~vEV~p~gvnKG~al~~Ll 777 (844)
.+.+. .++ ....++.+.+ .. .+.+ .++. .++||.|++++||.|+++++
T Consensus 143 ~~~~~~~~~~~~~~~~ki~~~---~~~----~~~~~~~~~l-~~-----~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~ 209 (274)
T 3fzq_A 143 ITYENNIEEYKSQDIHKICLW---SNE----KVFDEVKDIL-QD-----KMELAQRDISSQYYEIIQKDFHKGKAIKRLQ 209 (274)
T ss_dssp SCCCCCGGGCSSCCCCEEEEE---CCH----HHHHHHHHHH-GG-----GEEEEEEEGGGTEEEEEETTCSHHHHHHHHH
T ss_pred cccccchhhhcccCeEEEEEE---cCH----HHHHHHHHHh-hc-----ceEEEeccCCCceEEEeeCCCCHHHHHHHHH
Confidence 11111 111 1234455555 32 1343 3455 89999999999999999999
Q ss_pred HHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcc---hhhhcCCHHH--HHHHHHHH
Q 003145 778 AEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSL---SKEKKRKVHQ--LFGIFLRF 837 (844)
Q Consensus 778 ~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~---a~~~l~~~~~--v~~~l~~~ 837 (844)
+++| ++++++++||| +.|| |++ |++|+|||+.+++ |++...+.++ |..+|+++
T Consensus 210 ~~lg------i~~~~~i~~GD-~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~~~ 271 (274)
T 3fzq_A 210 ERLG------VTQKETICFGD-GQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFDNGIYKELKRR 271 (274)
T ss_dssp HHHT------CCSTTEEEECC-SGGGHHHHHTCSEEEEETTSCHHHHHHCSEEECCGGGTHHHHHHHHT
T ss_pred HHcC------CCHHHEEEECC-ChhHHHHHHhcCceEEecCccHHHHHhhhheeCCCchhHHHHHHHHh
Confidence 9999 78999999999 9999 888 9999999998754 4445555543 55666554
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.3e-20 Score=198.25 Aligned_cols=192 Identities=15% Similarity=0.161 Sum_probs=131.4
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC----ceEEee
Q 003145 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN----LWLAAE 667 (844)
Q Consensus 592 rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~----l~liae 667 (844)
+||++|+||||++.. ..+ ++++++|+++.+ |+.|+|+|||++..+.++++.++ .++|++
T Consensus 4 ~li~~DlDGTLl~~~--------------~~~-~~~~~~l~~~~~--gi~v~iaTGR~~~~~~~~~~~l~l~~~~~~I~~ 66 (244)
T 1s2o_A 4 LLLISDLDNTWVGDQ--------------QAL-EHLQEYLGDRRG--NFYLAYATGRSYHSARELQKQVGLMEPDYWLTA 66 (244)
T ss_dssp EEEEECTBTTTBSCH--------------HHH-HHHHHHHHTTGG--GEEEEEECSSCHHHHHHHHHHHTCCCCSEEEET
T ss_pred eEEEEeCCCCCcCCH--------------HHH-HHHHHHHHHhcC--CCEEEEEcCCCHHHHHHHHHHcCCCCCCEEEEC
Confidence 599999999999862 223 678899998664 79999999999999999998853 369999
Q ss_pred cceEEEecC---CeeeecccccCChHH-HHHHHHHHHHHHhcCCCceE----eeccceEEEEeecCChhhhHHHHHHHHH
Q 003145 668 NGMFLRCTT---GKWMTTMPEHLNMEW-VDSLKHVFEYFTERTPRSHF----EQRETSLVWNYKYADVEFGRIQARDMLQ 739 (844)
Q Consensus 668 nG~~i~~~~---~~w~~~~~~~~~~~w-~~~v~~i~~~~~~rt~gs~i----E~k~~sl~~hy~~~d~e~~~~qa~el~~ 739 (844)
||+++.... ..|...+ ...| .+.+..++.. .++... +.+...+.+++..... .....++.+
T Consensus 67 NGa~i~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ki~~~~~~~~~---~~~~~~l~~ 135 (244)
T 1s2o_A 67 VGSEIYHPEGLDQHWADYL----SEHWQRDILQAIADG----FEALKPQSPLEQNPWKISYHLDPQAC---PTVIDQLTE 135 (244)
T ss_dssp TTTEEEETTEECHHHHHHH----HTTCCHHHHHHHHHT----CTTEEECCGGGCBTTBEEEEECTTSC---THHHHHHHH
T ss_pred CCcEEEeCCCcChHHHHHH----hccccHHHHHHHHHh----ccCccccCcccCCCeEEEEEeChhhH---HHHHHHHHH
Confidence 999998521 1121111 1112 1222222222 222211 2234556666533211 111234445
Q ss_pred HHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeC
Q 003145 740 HLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGS 814 (844)
Q Consensus 740 ~L~~~~~~~~~~~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgn 814 (844)
.+ ... ...+.++ ++..++||.|++++||.|+++++++++ ++++++++||| +.|| ||+ +++|+|||
T Consensus 136 ~~-~~~--~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~------~~~~~~~~~GD-~~nD~~m~~~~g~~va~~n 205 (244)
T 1s2o_A 136 ML-KET--GIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLA------MEPSQTLVCGD-SGNDIGLFETSARGVIVRN 205 (244)
T ss_dssp HH-HTS--SCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTT------CCGGGEEEEEC-SGGGHHHHTSSSEEEECTT
T ss_pred HH-Hhc--CCCeEEEEecCceEEeccCCCChHHHHHHHHHHhC------CCHHHEEEECC-chhhHHHHhccCcEEEEcC
Confidence 55 332 2246664 578899999999999999999999998 78899999999 9999 998 78999999
Q ss_pred CCCcchh
Q 003145 815 SINSLSK 821 (844)
Q Consensus 815 a~~~~a~ 821 (844)
+.+++.+
T Consensus 206 a~~~~k~ 212 (244)
T 1s2o_A 206 AQPELLH 212 (244)
T ss_dssp CCHHHHH
T ss_pred CcHHHHH
Confidence 9876544
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.83 E-value=5.8e-20 Score=199.49 Aligned_cols=223 Identities=13% Similarity=0.193 Sum_probs=145.3
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhh--cccC------
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF--QEYN------ 661 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~--~~l~------ 661 (844)
..|||++|+||||++.. ...++++++++|++|.+ .|+.|+|+|||++..+..++ ..++
T Consensus 26 ~ikli~~DlDGTLl~~~-------------~~~is~~~~~al~~l~~-~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~~~~ 91 (301)
T 2b30_A 26 DIKLLLIDFDGTLFVDK-------------DIKVPSENIDAIKEAIE-KGYMVSICTGRSKVGILSAFGEENLKKMNFYG 91 (301)
T ss_dssp CCCEEEEETBTTTBCCT-------------TTCSCHHHHHHHHHHHH-HTCEEEEECSSCHHHHHHHHCHHHHHHHTCCS
T ss_pred cccEEEEECCCCCcCCC-------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHhhHHhhcccccCC
Confidence 47999999999999861 24589999999999997 59999999999999999988 7655
Q ss_pred ceEEeecceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcC---------C-CceEeec-cce--------EEEEe
Q 003145 662 LWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERT---------P-RSHFEQR-ETS--------LVWNY 722 (844)
Q Consensus 662 l~liaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt---------~-gs~iE~k-~~s--------l~~hy 722 (844)
.++|++||+++...++... .....+.+ .+.++++...+.. . +.+.+.. ... ..+++
T Consensus 92 ~~~I~~NGa~i~~~~~~~i--~~~~l~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 166 (301)
T 2b30_A 92 MPGVYINGTIVYDQIGYTL--LDETIETD---VYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSI 166 (301)
T ss_dssp CSEEEGGGTEEECTTCCEE--EECCCCHH---HHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCE
T ss_pred CeEEEcCCeEEEeCCCCEE--EEccCCHH---HHHHHHHHHHHcCCceEEEEEeCCEEEEcCchHHHHHHHHhhccCCce
Confidence 3699999999986222221 11223433 3344444332211 1 1111110 000 00011
Q ss_pred ecCChhh-------------hHHHHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCC
Q 003145 723 KYADVEF-------------GRIQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKT 788 (844)
Q Consensus 723 ~~~d~e~-------------~~~qa~el~~~L~~~~~~~~~~~v~~-g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~ 788 (844)
+..+.++ ......++.+.+ ...+. ..+.++. +..++||.|++++||.|++.+++.++ +
T Consensus 167 ~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~------~ 238 (301)
T 2b30_A 167 IIRHNEMLKYRTMNKLMIVLDPSESKTVIGNL-KQKFK-NKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYN------I 238 (301)
T ss_dssp EECHHHHTTCCCCSEEEECCCTTTHHHHHHHH-HHHST-TTEEEEECTTSCEEEEETTCCHHHHHHHHHHHTT------C
T ss_pred eecchhhhccCCceEEEEECCHHHHHHHHHHH-HHHhc-CCEEEEEeCCcceEecCCCCCcHHHHHHHHHHcC------C
Confidence 1000000 000122334444 22121 2466654 67899999999999999999999998 7
Q ss_pred CCceEEEEeeCCCch--hhc--cCcEEEeCCCCc---chhhhcC-CHH--HHHHHHHHHhhc
Q 003145 789 AIDYVLCIGHFLGKV--LLT--QFLIQVGSSINS---LSKEKKR-KVH--QLFGIFLRFSYS 840 (844)
Q Consensus 789 ~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~---~a~~~l~-~~~--~v~~~l~~~~~~ 840 (844)
+++.+++||| +.|| ||+ |++|+|||+.++ .|.+... +.+ -|..+|+++...
T Consensus 239 ~~~~~~~~GD-~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~~~~~~ 299 (301)
T 2b30_A 239 SNDQVLVVGD-AENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFDL 299 (301)
T ss_dssp CGGGEEEEEC-SGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHTT
T ss_pred CHHHEEEECC-CHHHHHHHHHcCCeEEEcCCcHHHHhhCCEEEccCCCCcHHHHHHHHHHhc
Confidence 8899999999 9999 888 899999999764 3555565 543 377888877543
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.83 E-value=6.3e-20 Score=195.53 Aligned_cols=216 Identities=14% Similarity=0.139 Sum_probs=141.7
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc---eEEee
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL---WLAAE 667 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l---~liae 667 (844)
.|+|++|+||||++. ...++++++++|++ .+ .|+.|+|+|||+...+..+++.+++ ++|++
T Consensus 2 ikli~~DlDGTLl~~--------------~~~i~~~~~~al~~-~~-~Gi~v~iaTGR~~~~~~~~~~~l~~~~~~~I~~ 65 (268)
T 1nf2_A 2 YRVFVFDLDGTLLND--------------NLEISEKDRRNIEK-LS-RKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAY 65 (268)
T ss_dssp BCEEEEECCCCCSCT--------------TSCCCHHHHHHHHH-HT-TTSEEEEECSSCHHHHHHHHHHHSSSCCCEEEG
T ss_pred ccEEEEeCCCcCCCC--------------CCccCHHHHHHHHH-Hh-CCCEEEEECCCChHHHHHHHHHhCCCCCeEEEe
Confidence 479999999999986 35689999999999 75 6999999999999999999988754 69999
Q ss_pred cceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhc--------CCCceEeecc---------ceEEEE-eecCChhh
Q 003145 668 NGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTER--------TPRSHFEQRE---------TSLVWN-YKYADVEF 729 (844)
Q Consensus 668 nG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~r--------t~gs~iE~k~---------~sl~~h-y~~~d~e~ 729 (844)
||+.+...++.. +.....+.++ +.++++.+.+. ..+.+.+.+. ..+... +... .++
T Consensus 66 NGa~i~~~~~~~--i~~~~l~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 139 (268)
T 1nf2_A 66 NGAIVYLPEEGV--ILNEKIPPEV---AKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNL-SEL 139 (268)
T ss_dssp GGTEEEETTTEE--EEECCBCHHH---HHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTH-HHH
T ss_pred CCeEEECCCCCE--EEecCCCHHH---HHHHHHHHHhCCCEEEEEECCEEEECCChHHHHHHHhhcCCceEecCCH-HHh
Confidence 999998633332 1112244333 34444444322 1122221110 000000 0000 000
Q ss_pred h-------------HHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEE
Q 003145 730 G-------------RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLC 795 (844)
Q Consensus 730 ~-------------~~qa~el~~~L~~~~~~~~~~~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vla 795 (844)
. .....++.+.+ ...+. ..+.++ ++..++||.|++++||.+++.++++++ ++++.+++
T Consensus 140 ~~~~~~~ki~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~------~~~~~~~~ 211 (268)
T 1nf2_A 140 VSKMGTTKLLLIDTPERLDELKEIL-SERFK-DVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMN------WKKEEIVV 211 (268)
T ss_dssp HHHHCBSEEEEECCHHHHHHHHHHH-HHHHT-TTSEEEEEETTEEEEECTTCCHHHHHHHHHHHHT------CCGGGEEE
T ss_pred cccCCceEEEEECCHHHHHHHHHHH-HHHhc-CCEEEEEecCceEEEeCCCCChHHHHHHHHHHcC------CCHHHeEE
Confidence 0 01122333333 21111 235554 577899999999999999999999998 77899999
Q ss_pred EeeCCCch--hhc--cCcEEEeCCCCcc---hhhhcCCHH--HHHHHHHHH
Q 003145 796 IGHFLGKV--LLT--QFLIQVGSSINSL---SKEKKRKVH--QLFGIFLRF 837 (844)
Q Consensus 796 iGD~~~nD--Mf~--g~~Iavgna~~~~---a~~~l~~~~--~v~~~l~~~ 837 (844)
||| +.|| |++ |++|+|||+.+++ |.+.+.+.+ -|..+|+++
T Consensus 212 ~GD-~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~~~ 261 (268)
T 1nf2_A 212 FGD-NENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLERI 261 (268)
T ss_dssp EEC-SHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHTTB
T ss_pred EcC-chhhHHHHHHcCCEEEecCCCHHHHhhCCEEEccCCcchHHHHHHHH
Confidence 999 9999 888 8999999987643 455565544 366666554
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.9e-19 Score=191.04 Aligned_cols=214 Identities=13% Similarity=0.122 Sum_probs=139.0
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC-ceEEeec
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN-LWLAAEN 668 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-l~liaen 668 (844)
..|+|+||+||||++.. ...++++++++|++|.+ .|+.|+++|||+...+ +.+..++ .++|++|
T Consensus 11 miKli~~DlDGTLl~~~-------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~-~~~~~l~~~~~i~~n 75 (268)
T 3r4c_A 11 MIKVLLLDVDGTLLSFE-------------THKVSQSSIDALKKVHD-SGIKIVIATGRAASDL-HEIDAVPYDGVIALN 75 (268)
T ss_dssp CCCEEEECSBTTTBCTT-------------TCSCCHHHHHHHHHHHH-TTCEEEEECSSCTTCC-GGGTTSCCCEEEEGG
T ss_pred ceEEEEEeCCCCCcCCC-------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCChHHh-HHHHhcCCCcEEEeC
Confidence 47999999999999842 35689999999999998 5999999999999887 4566653 4689999
Q ss_pred ceEE-EecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhH---------------H
Q 003145 669 GMFL-RCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGR---------------I 732 (844)
Q Consensus 669 G~~i-~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~---------------~ 732 (844)
|+.+ ...++.. .....+. +.+.++++.+.+..-...+....... . ....+.+.. .
T Consensus 76 Ga~i~~~~~~~~---~~~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (268)
T 3r4c_A 76 GAECVLRDGSVI---RKVAIPA---QDFRKSMELAREFDFAVALELNEGVF--V-NRLTPTVEQIAGIVEHPVPPVVDIE 146 (268)
T ss_dssp GTEEEETTSCEE---EECCCCH---HHHHHHHHHHHHTTCEEEEEETTEEE--E-SCCCHHHHHHHHHHTCCCCCBCCHH
T ss_pred CcEEEEcCCeEE---EEecCCH---HHHHHHHHHHHHcCcEEEEEECCEEE--E-eCCcHHHHHHHHHcCCCCCcccchH
Confidence 9999 7543321 1122343 34455555443321111111111100 0 000000000 0
Q ss_pred -H-------------HHHHHHHHhcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEe
Q 003145 733 -Q-------------ARDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797 (844)
Q Consensus 733 -q-------------a~el~~~L~~~~~~~~~~~v-~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiG 797 (844)
. ..+....+... + ..+.+ ..+..++||.|+++|||.|++.++++++ ++++++++||
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lg------i~~~~~ia~G 217 (268)
T 3r4c_A 147 EMFERKECCQLCFYFDEEAEQKVMPL-L--SGLSATRWHPLFADVNVAGTSKATGLSLFADYYR------VKVSEIMACG 217 (268)
T ss_dssp HHHHHSCCCCEEEECCHHHHHHHGGG-C--TTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTT------CCGGGEEEEE
T ss_pred HHhccCceEEEEEecChHHHHHHHHh-C--CCcEEEEecCCeEEEeeCCCCHHHHHHHHHHHcC------CCHHHEEEEC
Confidence 0 00111222111 1 13444 4578899999999999999999999999 7899999999
Q ss_pred eCCCch--hhc--cCcEEEeCCCCcc---hhhhcCCHHH--HHHHHHHH
Q 003145 798 HFLGKV--LLT--QFLIQVGSSINSL---SKEKKRKVHQ--LFGIFLRF 837 (844)
Q Consensus 798 D~~~nD--Mf~--g~~Iavgna~~~~---a~~~l~~~~~--v~~~l~~~ 837 (844)
| +.|| |++ |++|+||||.+++ |++...+.++ |..+|+++
T Consensus 218 D-~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~~ 265 (268)
T 3r4c_A 218 D-GGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALKHF 265 (268)
T ss_dssp C-SGGGHHHHHHSSEEEECTTSCHHHHHTCSEECCCTTTTHHHHHHHHT
T ss_pred C-cHHhHHHHHhCCCeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHHHh
Confidence 9 9999 998 9999999998764 4444555443 66666554
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-19 Score=191.57 Aligned_cols=211 Identities=11% Similarity=0.139 Sum_probs=138.9
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc-eEEeecc
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL-WLAAENG 669 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l-~liaenG 669 (844)
.|+|+||+||||++.. ..++++++++|++|.+ .|+.|+++|||+...+..++..+++ .+|+.||
T Consensus 3 ~kli~~DlDGTLl~~~--------------~~i~~~~~~al~~l~~-~G~~~~~aTGR~~~~~~~~~~~l~~~~~i~~nG 67 (258)
T 2pq0_A 3 RKIVFFDIDGTLLDEQ--------------KQLPLSTIEAVRRLKQ-SGVYVAIATGRAPFMFEHVRKQLGIDSFVSFNG 67 (258)
T ss_dssp CCEEEECTBTTTBCTT--------------SCCCHHHHHHHHHHHH-TTCEEEEECSSCGGGSHHHHHHHTCCCEEEGGG
T ss_pred ceEEEEeCCCCCcCCC--------------CccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHhcCCCEEEECCC
Confidence 5899999999999872 4589999999999988 5999999999999998888887743 4789999
Q ss_pred eEEEecCCe-eeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEE----------------EeecCChhh---
Q 003145 670 MFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVW----------------NYKYADVEF--- 729 (844)
Q Consensus 670 ~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~----------------hy~~~d~e~--- 729 (844)
+++...++. +.. ..+ .+.+.++++.+.+..-...+......... .+.....++
T Consensus 68 a~i~~~~~~i~~~----~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (258)
T 2pq0_A 68 QYVVFEGNVLYKQ----PLR---REKVRALTEEAHKNGHPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYEN 140 (258)
T ss_dssp TEEEETTEEEEEC----CCC---HHHHHHHHHHHHHTTCCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGG
T ss_pred CEEEECCEEEEEe----cCC---HHHHHHHHHHHHhCCCeEEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhc
Confidence 999864332 221 223 34555666655432111111100000000 000000000
Q ss_pred ---------h-HHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEee
Q 003145 730 ---------G-RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 798 (844)
Q Consensus 730 ---------~-~~qa~el~~~L~~~~~~~~~~~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD 798 (844)
+ ......+.+.+ . .+.+. ++..++||.|+++|||.|++.+++++| ++++++++|||
T Consensus 141 ~~~~k~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lg------i~~~~~ia~GD 207 (258)
T 2pq0_A 141 KDIYQALLFCRAEEEEPYVRNY-----P--EFRFVRWHDVSTDVLPAGGSKAEGIRMMIEKLG------IDKKDVYAFGD 207 (258)
T ss_dssp SCCCEEEECSCHHHHHHHHHHC-----T--TEEEEEEETTEEEEEESSCCHHHHHHHHHHHHT------CCGGGEEEECC
T ss_pred cCceEEEEECCHHHHHHHHHhC-----C--CeEEEEeCCceEEEEECCCChHHHHHHHHHHhC------CCHHHEEEECC
Confidence 0 00111111111 1 34443 477899999999999999999999999 78999999999
Q ss_pred CCCch--hhc--cCcEEEeCCCCcc---hhhhcCCHHH--HHHHHHHH
Q 003145 799 FLGKV--LLT--QFLIQVGSSINSL---SKEKKRKVHQ--LFGIFLRF 837 (844)
Q Consensus 799 ~~~nD--Mf~--g~~Iavgna~~~~---a~~~l~~~~~--v~~~l~~~ 837 (844)
+.|| |++ |++|+||||.+++ |++...+.++ |..+|+++
T Consensus 208 -s~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~~~~~dGva~~i~~~ 254 (258)
T 2pq0_A 208 -GLNDIEMLSFVGTGVAMGNAHEEVKRVADFVTKPVDKEGIWYGLKQL 254 (258)
T ss_dssp -SGGGHHHHHHSSEEEEETTCCHHHHHTCSEEECCGGGTHHHHHHHHT
T ss_pred -cHHhHHHHHhCCcEEEeCCCcHHHHHhCCEEeCCCCcchHHHHHHHh
Confidence 9999 998 9999999998754 4444555443 55555543
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.82 E-value=6.8e-19 Score=189.46 Aligned_cols=216 Identities=12% Similarity=0.197 Sum_probs=143.6
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc--eEEeec
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAEN 668 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l--~liaen 668 (844)
.|+|+||+||||++. ...+++.++++|++|.+ .|+.|+++|||+...+..++..+++ .+|++|
T Consensus 4 ikli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 68 (288)
T 1nrw_A 4 MKLIAIDLDGTLLNS--------------KHQVSLENENALRQAQR-DGIEVVVSTGRAHFDVMSIFEPLGIKTWVISAN 68 (288)
T ss_dssp CCEEEEECCCCCSCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGG
T ss_pred eEEEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcC
Confidence 589999999999987 34688999999999987 5999999999999999999988743 699999
Q ss_pred ceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcC--------CCceEeecc------c---e--------------
Q 003145 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERT--------PRSHFEQRE------T---S-------------- 717 (844)
Q Consensus 669 G~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt--------~gs~iE~k~------~---s-------------- 717 (844)
|+.+....+.. +.....+ .+.+.++++...+.. .+.+.+... . .
T Consensus 69 Ga~i~~~~~~~--~~~~~~~---~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (288)
T 1nrw_A 69 GAVIHDPEGRL--YHHETID---KKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQ 143 (288)
T ss_dssp GTEEECTTCCE--EEECCCC---HHHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHH
T ss_pred CeEEEcCCCcE--EEEeeCC---HHHHHHHHHHHHHCCcEEEEEeCCEEEEcCchHHHHHHHHHHHhhcccccchHHHHh
Confidence 99998522221 1111222 244555555443321 111111000 0 0
Q ss_pred --------EEEEeecCChhh-----------------hHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHH
Q 003145 718 --------LVWNYKYADVEF-----------------GRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGA 771 (844)
Q Consensus 718 --------l~~hy~~~d~e~-----------------~~~qa~el~~~L~~~~~~~~~~~v~-~g~~~vEV~p~gvnKG~ 771 (844)
..+.+...-.++ ......++.+.+ .. . ..+.++ ++..++||.|++++||.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~~l-~~-~--~~~~~~~s~~~~lei~~~~~~K~~ 219 (288)
T 1nrw_A 144 AAEVQYSQSGFAYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRY-EH-A--EDLTLVSSAEHNFELSSRKASKGQ 219 (288)
T ss_dssp HHHHHHHTCCEEECSCGGGGTSSSSCCCEEEEEEECSCHHHHHHHHHHH-TT-C--TTEEEECSSTTEEEEEETTCSHHH
T ss_pred hhhhhhhcCCceEcCCHHHhhccccCCCceEEEEEcCCHHHHHHHHHHH-hh-C--CCEEEEeeCCCcEEEecCCCChHH
Confidence 001110000000 012234455555 33 2 246665 46789999999999999
Q ss_pred HHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcc---hhhhcCCHHH--HHHHHHHH
Q 003145 772 AIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSL---SKEKKRKVHQ--LFGIFLRF 837 (844)
Q Consensus 772 al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~---a~~~l~~~~~--v~~~l~~~ 837 (844)
|++.++++++ ++++.+++||| +.|| |++ |++|+|||+.+++ |.+...+.++ |..+|+++
T Consensus 220 ~~~~~~~~~~------~~~~~~~~~GD-~~nD~~m~~~ag~~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~~~ 287 (288)
T 1nrw_A 220 ALKRLAKQLN------IPLEETAAVGD-SLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMKHL 287 (288)
T ss_dssp HHHHHHHHTT------CCGGGEEEEES-SGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHT
T ss_pred HHHHHHHHhC------CCHHHEEEEcC-CHHHHHHHHHcCcEEEEcCCCHHHHhhCceeecCCCcChHHHHHHHh
Confidence 9999999998 78899999999 9999 888 8999999997654 4445555444 55666553
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-19 Score=188.54 Aligned_cols=201 Identities=16% Similarity=0.136 Sum_probs=139.3
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc--eEEeec
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAEN 668 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l--~liaen 668 (844)
.|+|++|+||||++. ...++++++++|++|.+ .|+.|+|+|||+...+..+++.+++ ++|++|
T Consensus 5 ~kli~~DlDGTLl~~--------------~~~i~~~~~~~l~~l~~-~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~N 69 (227)
T 1l6r_A 5 IRLAAIDVDGNLTDR--------------DRLISTKAIESIRSAEK-KGLTVSLLSGNVIPVVYALKIFLGINGPVFGEN 69 (227)
T ss_dssp CCEEEEEHHHHSBCT--------------TSCBCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGG
T ss_pred eEEEEEECCCCCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeC
Confidence 589999999999986 34689999999999987 5999999999999999999988754 599999
Q ss_pred ceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccc--------eEEEEeecCChhhhHHHHHHHHHH
Q 003145 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRET--------SLVWNYKYADVEFGRIQARDMLQH 740 (844)
Q Consensus 669 G~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~--------sl~~hy~~~d~e~~~~qa~el~~~ 740 (844)
|+++...++.... ..... +.+.++ +...+ .+ ..+.. .+.......++ +..+.
T Consensus 70 Ga~i~~~~~~~i~-~~~~l-----~~~~~i-~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 129 (227)
T 1l6r_A 70 GGIMFDNDGSIKK-FFSNE-----GTNKFL-EEMSK----RT-SMRSILTNRWREASTGFDIDPEDV--------DYVRK 129 (227)
T ss_dssp GTEEECTTSCEEE-SSCSH-----HHHHHH-HHHTT----TS-SCBCCGGGGGCSSSEEEBCCGGGH--------HHHHH
T ss_pred CcEEEeCCCCEEE-EeccH-----HHHHHH-HHHHH----Hh-cCCccccccceecccceEEecCCH--------HHHHH
Confidence 9999852333210 11112 444444 43322 11 11000 00000000011 11222
Q ss_pred HhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCC
Q 003145 741 LWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSI 816 (844)
Q Consensus 741 L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~ 816 (844)
+.+. + .+.++++..++||.|++++||.++++++++++ ++++.+++||| +.|| |++ +++|+|||+.
T Consensus 130 ~~~~-~---~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~------~~~~~~~~iGD-~~nD~~m~~~ag~~va~~n~~ 198 (227)
T 1l6r_A 130 EAES-R---GFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYS------LEYDEILVIGD-SNNDMPMFQLPVRKACPANAT 198 (227)
T ss_dssp HHHT-T---TEEEEEETTEEEEEETTCSHHHHHHHHHHHTT------CCGGGEEEECC-SGGGHHHHTSSSEEEECTTSC
T ss_pred HHHh-c---CEEEEecCcEEEEecCCCCHHHHHHHHHHHhC------cCHHHEEEECC-cHHhHHHHHHcCceEEecCch
Confidence 3133 2 46666888999999999999999999999998 77899999999 9999 888 8999999997
Q ss_pred Ccc---hhhhcCCH--HHHHHHHHHH
Q 003145 817 NSL---SKEKKRKV--HQLFGIFLRF 837 (844)
Q Consensus 817 ~~~---a~~~l~~~--~~v~~~l~~~ 837 (844)
+++ |.+...+. +-|..+|+++
T Consensus 199 ~~~k~~a~~v~~~~~~~Gv~~~l~~~ 224 (227)
T 1l6r_A 199 DNIKAVSDFVSDYSYGEEIGQIFKHF 224 (227)
T ss_dssp HHHHHHCSEECSCCTTHHHHHHHHHT
T ss_pred HHHHHhCCEEecCCCCcHHHHHHHHH
Confidence 643 44555554 3466777665
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.8e-19 Score=190.01 Aligned_cols=185 Identities=17% Similarity=0.113 Sum_probs=123.3
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC--ceEEeec
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--l~liaen 668 (844)
.|||++|+||||+ .. ..++ +++++|++|.+ .|+.|+|+|||+...+..++..++ .++|++|
T Consensus 2 ikli~~DlDGTLl-~~--------------~~~~-~~~~~l~~l~~-~g~~~~i~Tgr~~~~~~~~~~~~~~~~~~I~~N 64 (249)
T 2zos_A 2 IRLIFLDIDKTLI-PG--------------YEPD-PAKPIIEELKD-MGFEIIFNSSKTRAEQEYYRKELEVETPFISEN 64 (249)
T ss_dssp EEEEEECCSTTTC-TT--------------SCSG-GGHHHHHHHHH-TTEEEEEBCSSCHHHHHHHHHHHTCCSCEEETT
T ss_pred ccEEEEeCCCCcc-CC--------------CCcH-HHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCccEEEeC
Confidence 4899999999999 42 2344 49999999987 599999999999999999998875 4799999
Q ss_pred ceEEEecC-------------CeeeecccccCChHHHHHHHHHHHHHHhcCC----------------CceEe------e
Q 003145 669 GMFLRCTT-------------GKWMTTMPEHLNMEWVDSLKHVFEYFTERTP----------------RSHFE------Q 713 (844)
Q Consensus 669 G~~i~~~~-------------~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~----------------gs~iE------~ 713 (844)
|+++...+ +.+... ...+. +.+.++++.+.+..+ +.... .
T Consensus 65 Ga~i~~~~~~~~~~~~~~~~~~~~i~~--~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (249)
T 2zos_A 65 GSAIFIPKGYFPFDVKGKEVGNYIVIE--LGIRV---EKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAME 139 (249)
T ss_dssp TTEEECCTTCCC------CCCCCCEEE--CSCCH---HHHHHHHHHHHHHHTCEEGGGSCHHHHHHHHCCCTTTHHHHHC
T ss_pred CeEEEccCCcccccccccccCceEEEe--cCCCH---HHHHHHHHHHHhhcCEEEecCCCHHHHHHHhCCChhHhhhhhh
Confidence 99998532 222111 12332 333334333322100 00000 0
Q ss_pred ccceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCC-CCce
Q 003145 714 RETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKT-AIDY 792 (844)
Q Consensus 714 k~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~-~~d~ 792 (844)
+.....+.+.. +++. .+.+ .. ..+.++.+..++||.| ++|||.|++.|+++++ + ++++
T Consensus 140 ~~~~~~~~~~~-~~~~--------~~~l-~~----~~~~~~~s~~~~ei~~-g~sKg~al~~l~~~~~------~~~~~~ 198 (249)
T 2zos_A 140 REYSETIFEWS-RDGW--------EEVL-VE----GGFKVTMGSRFYTVHG-NSDKGKAAKILLDFYK------RLGQIE 198 (249)
T ss_dssp CSSCEEEEECS-SSCH--------HHHH-HH----TTCEEEECSSSEEEEC-SCCHHHHHHHHHHHHH------TTSCEE
T ss_pred hhhcCceEecC-CHHH--------HHHH-Hh----CCEEEEecCCeEEEeC-CCChHHHHHHHHHHhc------cCCCce
Confidence 00011111111 1111 2223 21 1356666667899999 9999999999999988 6 6899
Q ss_pred EEEEeeCCCch--hhc--cCcEEEeCCC-Ccc
Q 003145 793 VLCIGHFLGKV--LLT--QFLIQVGSSI-NSL 819 (844)
Q Consensus 793 vlaiGD~~~nD--Mf~--g~~Iavgna~-~~~ 819 (844)
++|||| +.|| ||+ |++|+|||+. +++
T Consensus 199 viafGD-~~NDi~Ml~~ag~~va~gna~~~~~ 229 (249)
T 2zos_A 199 SYAVGD-SYNDFPMFEVVDKVFIVGSLKHKKA 229 (249)
T ss_dssp EEEEEC-SGGGHHHHTTSSEEEEESSCCCTTE
T ss_pred EEEECC-CcccHHHHHhCCcEEEeCCCCcccc
Confidence 999999 9999 999 8999999997 544
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.81 E-value=6.5e-19 Score=183.49 Aligned_cols=208 Identities=13% Similarity=0.130 Sum_probs=146.4
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC--ceEEeec
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--l~liaen 668 (844)
.|+|+||+||||++. ...++++++++|++|.+ .|+.|+++|||+...+.+++..++ ..+|++|
T Consensus 3 ~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~n 67 (231)
T 1wr8_A 3 IKAISIDIDGTITYP--------------NRMIHEKALEAIRRAES-LGIPIMLVTGNTVQFAEAASILIGTSGPVVAED 67 (231)
T ss_dssp CCEEEEESTTTTBCT--------------TSCBCHHHHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGG
T ss_pred eeEEEEECCCCCCCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeC
Confidence 589999999999986 34588999999999987 599999999999999998888774 3589999
Q ss_pred ceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEee-ccc---eEEEEeecCChhhhHHHHHHHHHHHhcC
Q 003145 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQ-RET---SLVWNYKYADVEFGRIQARDMLQHLWTG 744 (844)
Q Consensus 669 G~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~-k~~---sl~~hy~~~d~e~~~~qa~el~~~L~~~ 744 (844)
|+.+... +.. +..... +.+.++++.+.+..||..++. +.. .+.+...+.++ ....++.+.+
T Consensus 68 Ga~i~~~-~~~--~~~~~l-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~--- 132 (231)
T 1wr8_A 68 GGAISYK-KKR--IFLASM-----DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINV----ETVREIINEL--- 132 (231)
T ss_dssp GTEEEET-TEE--EESCCC-----SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCH----HHHHHHHHHT---
T ss_pred CcEEEeC-CEE--EEeccH-----HHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCH----HHHHHHHHhc---
Confidence 9988753 332 111122 344555555543445543311 000 11211101122 1233344433
Q ss_pred CCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCc--
Q 003145 745 PISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINS-- 818 (844)
Q Consensus 745 ~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~-- 818 (844)
. ..+.++++..++||.|++++||.+++.++++++ ++++.+++||| +.|| |++ |++|+|||+.++
T Consensus 133 --~-~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~------~~~~~~~~iGD-~~nD~~~~~~ag~~v~~~~~~~~~~ 202 (231)
T 1wr8_A 133 --N-LNLVAVDSGFAIHVKKPWINKGSGIEKASEFLG------IKPKEVAHVGD-GENDLDAFKVVGYKVAVAQAPKILK 202 (231)
T ss_dssp --T-CSCEEEECSSCEEEECTTCCHHHHHHHHHHHHT------SCGGGEEEEEC-SGGGHHHHHHSSEEEECTTSCHHHH
T ss_pred --C-CcEEEEecCcEEEEecCCCChHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHcCCeEEecCCCHHHH
Confidence 1 235666778899999999999999999999998 67899999999 9999 888 889999998753
Q ss_pred -chhhhcCCHHH--HHHHHHHHh
Q 003145 819 -LSKEKKRKVHQ--LFGIFLRFS 838 (844)
Q Consensus 819 -~a~~~l~~~~~--v~~~l~~~~ 838 (844)
.|.+.+.+.++ |..+|+++.
T Consensus 203 ~~a~~v~~~~~e~Gv~~~l~~~~ 225 (231)
T 1wr8_A 203 ENADYVTKKEYGEGGAEAIYHIL 225 (231)
T ss_dssp TTCSEECSSCHHHHHHHHHHHHH
T ss_pred hhCCEEecCCCcchHHHHHHHHH
Confidence 45666777665 777777654
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.80 E-value=5.1e-19 Score=173.46 Aligned_cols=162 Identities=14% Similarity=0.077 Sum_probs=122.8
Q ss_pred CcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEE
Q 003145 363 RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 442 (844)
Q Consensus 363 ~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~ 442 (844)
+.+|+++||+.+.||+..+++|+..+ +++|+ +.|+++|. ++....++ +++.+.+. .|.
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l-~~~~~----~~l~i~G~-----g~~~~~~~----~~~~~~~~--------~v~ 59 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALS-KYKQD----IVLLLKGK-----GPDEKKIK----LLAQKLGV--------KAE 59 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTC-TTGGG----EEEEEECC-----STTHHHHH----HHHHHHTC--------EEE
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHh-ccCCC----eEEEEEeC-----CccHHHHH----HHHHHcCC--------eEE
Confidence 46899999999999999999999986 34454 56888864 23333333 44443332 244
Q ss_pred EeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCc-eEEEeC-CCCchhhccCCeEEECCCCHHHHHHH
Q 003145 443 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKG-VLILSE-FAGAAQSLGAGAILVNPWNITEVANA 520 (844)
Q Consensus 443 ~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g-~lVlSe-~~G~~~~lg~~g~lvnP~d~~~~A~a 520 (844)
+ |.++.+++..+|+.||++++||..||||++++|||||| . |+|++. .+|..+.+..++.+++|.|+++++++
T Consensus 60 -~-g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G----~vPvi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 133 (166)
T 3qhp_A 60 -F-GFVNSNELLEILKTCTLYVHAANVESEAIACLEAISVG----IVPVIANSPLSATRQFALDERSLFEPNNAKDLSAK 133 (166)
T ss_dssp -C-CCCCHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTT----CCEEEECCTTCGGGGGCSSGGGEECTTCHHHHHHH
T ss_pred -E-eecCHHHHHHHHHhCCEEEECCcccCccHHHHHHHhcC----CCcEEeeCCCCchhhhccCCceEEcCCCHHHHHHH
Confidence 5 99999999999999999999999999999999999995 5 667634 45555555556679999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHH
Q 003145 521 IARALNMSPEEREKRHWHNFTHVTTHTAQEWAE 553 (844)
Q Consensus 521 i~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 553 (844)
|.++++. ++.+.++.+++++++++|+|+.+++
T Consensus 134 i~~l~~~-~~~~~~~~~~~~~~~~~~s~~~~~~ 165 (166)
T 3qhp_A 134 IDWWLEN-KLERERMQNEYAKSALNYTLENSVI 165 (166)
T ss_dssp HHHHHHC-HHHHHHHHHHHHHHHHHHC------
T ss_pred HHHHHhC-HHHHHHHHHHHHHHHHHCChhhhhc
Confidence 9999994 5677788888888899999888765
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-18 Score=197.88 Aligned_cols=180 Identities=8% Similarity=0.006 Sum_probs=131.1
Q ss_pred EEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecc-cccCCHHHHHHHHHHHHHhCcCCCCceEEEEEE
Q 003145 327 RVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRL-DMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIA 405 (844)
Q Consensus 327 ~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRl-d~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~ 405 (844)
++.++|+|+|.+.|.+... ...++++|+++||+ .+.||+..+|+||+.+.+++|+. .++.|+++|
T Consensus 218 ~~~~i~~g~d~~~~~~~~~-------------~~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~-~~~~l~ivG 283 (413)
T 2x0d_A 218 DEYFFQPKINTTLKNYIND-------------KRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRS-NEWKIISVG 283 (413)
T ss_dssp EEEEECCCCCHHHHTTTTS-------------CCCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTG-GGCEEEEEE
T ss_pred ceEEeCCCcCchhhccccc-------------ccCCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCC-CceEEEEEc
Confidence 5788999999987753210 11356789999997 68999999999999998888851 135588887
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccC
Q 003145 406 VPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDL 485 (844)
Q Consensus 406 ~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~ 485 (844)
.+... .++ +.. ..|+ |.|.++.+++..+|+.||+||+||..||||++++||||||
T Consensus 284 ~~~~~----------------~~l----~~~--~~v~-f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G-- 338 (413)
T 2x0d_A 284 EKHKD----------------IAL----GKG--IHLN-SLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFG-- 338 (413)
T ss_dssp SCCCC----------------EEE----ETT--EEEE-EEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTT--
T ss_pred CCchh----------------hhc----CCc--CcEE-EcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCC--
Confidence 53210 011 111 1355 5899999999999999999999999999999999999995
Q ss_pred CCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHH
Q 003145 486 KKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWA 552 (844)
Q Consensus 486 ~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~ 552 (844)
.|+|++ .+|..+.+ |.+|++|+|.|++++|++|.++++++. .+.+ ++++.++.++|+.-+
T Consensus 339 --~PVV~~-~~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~~~-~~~~---~~~~~~~~~~W~~~~ 400 (413)
T 2x0d_A 339 --LRVITN-KYENKDLSNWHSNIVSLEQLNPENIAETLVELCMSFN-NRDV---DKKESSNMMFYINEF 400 (413)
T ss_dssp --CEEEEE-CBTTBCGGGTBTTEEEESSCSHHHHHHHHHHHHHHTC-----------CCBSCGGGCCCC
T ss_pred --CcEEEe-CCCcchhhhcCCCEEEeCCCCHHHHHHHHHHHHcCHH-HHHH---hHHHHHHhCCHHHHH
Confidence 677764 45777766 678999999999999999999998653 2322 334445555554433
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.78 E-value=3.2e-19 Score=189.05 Aligned_cols=213 Identities=15% Similarity=0.213 Sum_probs=140.8
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccC-CChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC----c-eEE
Q 003145 592 RLLILGFNATLTEPVDTPGRRGDQIREMELK-LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN----L-WLA 665 (844)
Q Consensus 592 rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~-~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~----l-~li 665 (844)
|+|+||+||||++.. .. ++++++++|++|++ .|+.|+++|||+ ..+.+++..++ + ++|
T Consensus 3 kli~~DlDGTLl~~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~-~~~~~~~~~l~~~~~~~~~i 66 (261)
T 2rbk_A 3 KALFFDIDGTLVSFE--------------THRIPSSTIEALEAAHA-KGLKIFIATGRP-KAIINNLSELQDRNLIDGYI 66 (261)
T ss_dssp CEEEECSBTTTBCTT--------------TSSCCHHHHHHHHHHHH-TTCEEEEECSSC-GGGCCSCHHHHHTTCCCEEE
T ss_pred cEEEEeCCCCCcCCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEECCCh-HHHHHHHHHhCcccccCeEE
Confidence 799999999999873 34 88999999999998 599999999999 88877766554 3 689
Q ss_pred eecceEEEecCCe-eeecccccCChHHHHHHHHHHHHHHhc-CC-------CceEeeccceEE-EEeec--------CCh
Q 003145 666 AENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFTER-TP-------RSHFEQRETSLV-WNYKY--------ADV 727 (844)
Q Consensus 666 aenG~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~r-t~-------gs~iE~k~~sl~-~hy~~--------~d~ 727 (844)
++||+++...++. +.. ..+. +.+.++++...+. .+ +.+++.....+. .+++. ..+
T Consensus 67 ~~nGa~i~~~~~~i~~~----~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (261)
T 2rbk_A 67 TMNGAYCFVGEEVIYKS----AIPQ---EEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSF 139 (261)
T ss_dssp EGGGTEEEETTEEEEEC----CCCH---HHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCH
T ss_pred EeCCEEEEECCEEEEec----CCCH---HHHHHHHHHHHHcCCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCcccc
Confidence 9999999863222 222 2343 3344444443332 11 112211000000 00000 000
Q ss_pred hhhH---------HHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEe
Q 003145 728 EFGR---------IQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797 (844)
Q Consensus 728 e~~~---------~qa~el~~~L~~~~~~~~~~~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiG 797 (844)
++.. ....+....+ ...+. .+.++ ++..++||.|.+++||.+++.++++++ ++++.+++||
T Consensus 140 ~~~~~~~~~k~~~~~~~~~~~~~-~~~~~--~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~------~~~~~~~~iG 210 (261)
T 2rbk_A 140 EEASNKEVIQMTPFITEEEEKEV-LPSIP--TCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFG------IKLEETMSFG 210 (261)
T ss_dssp HHHHTSCCSEEEECCCHHHHHHH-GGGST--TCEEECSSTTCCEEESTTCSHHHHHHHHHHHHT------CCGGGEEEEE
T ss_pred chhccCceeEEEEEeCHHHHHHH-HHhcC--CeEEEEecCCeEEecCCCCChHHHHHHHHHHcC------CCHHHEEEEC
Confidence 0000 0000011123 22222 25555 467899999999999999999999999 7889999999
Q ss_pred eCCCch--hhc--cCcEEEeCCCCc---chhhhcCCHHH--HHHHHHHH
Q 003145 798 HFLGKV--LLT--QFLIQVGSSINS---LSKEKKRKVHQ--LFGIFLRF 837 (844)
Q Consensus 798 D~~~nD--Mf~--g~~Iavgna~~~---~a~~~l~~~~~--v~~~l~~~ 837 (844)
| +.|| |++ |++|+|||+.++ .|.+.+.+.++ |..+|+++
T Consensus 211 D-~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~~~ 258 (261)
T 2rbk_A 211 D-GGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKHF 258 (261)
T ss_dssp C-SGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHHH
T ss_pred C-CHHHHHHHHHcCceEEecCccHHHHhhCCEEeccCchhhHHHHHHHh
Confidence 9 9999 888 899999998764 45667889999 98888875
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=3.9e-18 Score=180.56 Aligned_cols=206 Identities=14% Similarity=0.106 Sum_probs=133.9
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCceEEeecceEE
Q 003145 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFL 672 (844)
Q Consensus 593 Li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~liaenG~~i 672 (844)
||+||+||||++. . .++++++++|++|.+ +|+.|+++|||+...+. .++ +..++|++||+.+
T Consensus 2 li~~DlDGTLl~~--------------~-~i~~~~~~al~~l~~-~Gi~v~iaTGR~~~~~~-~l~-~~~~~i~~nGa~i 63 (259)
T 3zx4_A 2 IVFTDLDGTLLDE--------------R-GELGPAREALERLRA-LGVPVVPVTAKTRKEVE-ALG-LEPPFIVENGGGL 63 (259)
T ss_dssp EEEECCCCCCSCS--------------S-SSCSTTHHHHHHHHH-TTCCEEEBCSSCHHHHH-HTT-CCSSEEEGGGTEE
T ss_pred EEEEeCCCCCcCC--------------C-cCCHHHHHHHHHHHH-CCCeEEEEeCCCHHHHH-HcC-CCCcEEEECCcEE
Confidence 7999999999987 3 578899999999997 69999999999999998 332 2457999999998
Q ss_pred EecCCe----e-----eecccccCChHHHHHHHHHHHHHHhc--CC-CceEe---------------------eccceEE
Q 003145 673 RCTTGK----W-----MTTMPEHLNMEWVDSLKHVFEYFTER--TP-RSHFE---------------------QRETSLV 719 (844)
Q Consensus 673 ~~~~~~----w-----~~~~~~~~~~~w~~~v~~i~~~~~~r--t~-gs~iE---------------------~k~~sl~ 719 (844)
...+.. | ..+.....+ .+.+.++++.+.+. .. ..+.. .+.....
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (259)
T 3zx4_A 64 YLPRDWPVRAGRPKGGYRVVSLAWP---YRKVRARLREAEALAGRPILGYGDLTAEAVARLTGLSREAARRAKAREYDET 140 (259)
T ss_dssp EEETTCSSCCSEEETTEEEEECSCC---HHHHHHHHHHHHHHHTSCCCBGGGBCHHHHHHHHCCCHHHHHHHTCCSSCEE
T ss_pred EeCCCCcccccccCCceEEEEcCCC---HHHHHHHHHHHHHhcCceEEEcCCCCHHHHHHHcCCCHHHhhhhhcccccee
Confidence 864332 0 011111223 22333343333210 00 00000 0000000
Q ss_pred EEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCC--ceEEEEe
Q 003145 720 WNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAI--DYVLCIG 797 (844)
Q Consensus 720 ~hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~--d~vlaiG 797 (844)
+.+ .+ + ....+.+.+ .. ..+.++.+..++||.|+ ++||.|+++++++++ +++ +++++||
T Consensus 141 ~~~--~~-~----~~~~~~~~l-~~----~~~~~~~s~~~~ei~~~-~~K~~~l~~l~~~~~------i~~~~~~~~~~G 201 (259)
T 3zx4_A 141 LVL--CP-E----EVEAVLEAL-EA----VGLEWTHGGRFYHAAKG-ADKGRAVARLRALWP------DPEEARFAVGLG 201 (259)
T ss_dssp BCC--CT-T----THHHHHHHH-HH----TTCEEEECSSSEEEESS-CCHHHHHHHHHHTCS------SHHHHTSEEEEE
T ss_pred EEe--Cc-H----HHHHHHHHH-HH----CCcEEEecCceEEEcCC-CCHHHHHHHHHHHhC------CCCCCceEEEEe
Confidence 001 11 1 123344444 22 14677776677899999 999999999999998 667 9999999
Q ss_pred eCCCch--hhc--cCcEEEeCCCCcchhhhcCC---HHHHHHHHHHHhhc
Q 003145 798 HFLGKV--LLT--QFLIQVGSSINSLSKEKKRK---VHQLFGIFLRFSYS 840 (844)
Q Consensus 798 D~~~nD--Mf~--g~~Iavgna~~~~a~~~l~~---~~~v~~~l~~~~~~ 840 (844)
| +.|| ||+ +++|+||||.+ ++...+.. .+-|..+|+.+...
T Consensus 202 D-~~nD~~m~~~ag~~va~~na~~-~~~~~~~~~~~~~gv~~~~~~~~~~ 249 (259)
T 3zx4_A 202 D-SLNDLPLFRAVDLAVYVGRGDP-PEGVLATPAPGPEGFRYAVERYLLP 249 (259)
T ss_dssp S-SGGGHHHHHTSSEEEECSSSCC-CTTCEECSSCHHHHHHHHHHHHTTT
T ss_pred C-CHHHHHHHHhCCCeEEeCChhh-cCCcEEeCCCCchHHHHHHHHHHHh
Confidence 9 9999 898 89999999988 75544332 33466677766543
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=2.3e-18 Score=194.77 Aligned_cols=240 Identities=10% Similarity=-0.016 Sum_probs=160.5
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHH-HhhhcCCEEEEecHHHHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLL-RAVLAADLVGFHTYDYARHFVSACTRI 309 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll-~~ll~aDlIgf~t~~~~~~Fl~~~~~~ 309 (844)
..|+|+.++.-...+..+.+.. +.|+.+++|..... ..+...+....+. ..+-.+|.|...+....+.
T Consensus 124 ~~DvIh~~~~~~~~~~~~~~~~--~~p~v~~~h~~~~~-~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~-------- 192 (406)
T 2hy7_A 124 ESDVIVFESGIAVAFIELAKRV--NPAAKLVYRASDGL-STINVASYIEREFDRVAPTLDVIALVSPAMAAE-------- 192 (406)
T ss_dssp HCSEEEEESSGGGGGHHHHHHH--CTTSEEEEEESSCH-HHHTCCHHHHHHHHHHGGGCSEEEESCGGGGGG--------
T ss_pred CCCEEEECCchHHHHHHHHHHh--CCCEEEEEeccchh-hcccccHHHHHHHHHHHHhCCEEEEcCHHHHHH--------
Confidence 4588874443222222344433 46777778864320 1111112222222 2334567766555422111
Q ss_pred hCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHH
Q 003145 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 389 (844)
Q Consensus 310 l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll 389 (844)
+.-.+ ++.++|+|||.+.|.+.... ...++++|+++||+.+.||+ ++.+.
T Consensus 193 ---------~~~~~---~i~vipngvd~~~f~~~~~~------------~~~~~~~i~~vGrl~~~Kg~------~~~l~ 242 (406)
T 2hy7_A 193 ---------VVSRD---NVFHVGHGVDHNLDQLGDPS------------PYAEGIHAVAVGSMLFDPEF------FVVAS 242 (406)
T ss_dssp ---------CSCST---TEEECCCCBCTTHHHHHCSC------------SCCSSEEEEEECCTTBCHHH------HHHHH
T ss_pred ---------HHhcC---CEEEEcCCcChHhcCccccc------------ccCCCcEEEEEeccccccCH------HHHHH
Confidence 11122 68899999999998764221 11234899999999999999 45555
Q ss_pred HhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCC
Q 003145 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR 469 (844)
Q Consensus 390 ~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~ 469 (844)
+..|+ +.|+++|.+ + +.+. |.. ..|+| .|.++.+++..+|+.||++|+||..
T Consensus 243 ~~~~~----~~l~ivG~g-----~------------~~~~----~l~--~~V~f-~G~~~~~~l~~~~~~adv~v~ps~~ 294 (406)
T 2hy7_A 243 KAFPQ----VTFHVIGSG-----M------------GRHP----GYG--DNVIV-YGEMKHAQTIGYIKHARFGIAPYAS 294 (406)
T ss_dssp HHCTT----EEEEEESCS-----S------------CCCT----TCC--TTEEE-ECCCCHHHHHHHHHTCSEEECCBSC
T ss_pred HhCCC----eEEEEEeCc-----h------------HHhc----CCC--CCEEE-cCCCCHHHHHHHHHhcCEEEECCCc
Confidence 66776 458878632 2 1111 111 13664 7999999999999999999999999
Q ss_pred cCCChhHhhhh-------hcccCCCceEEEeCCCCchhhc-cCCeEE-ECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 003145 470 DGMNLVSYEFV-------ACQDLKKGVLILSEFAGAAQSL-GAGAIL-VNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (844)
Q Consensus 470 EG~~Lv~~Eam-------a~~~~~~g~lVlSe~~G~~~~l-g~~g~l-vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~ 540 (844)
||||++++||| ||| .|+|+|+. .. +.+|++ |+|.|++++|++|.++++++. +
T Consensus 295 E~~~~~~lEAm~Kl~eYla~G----~PVIas~~-----v~~~~~G~l~v~~~d~~~la~ai~~ll~~~~----------~ 355 (406)
T 2hy7_A 295 EQVPVYLADSSMKLLQYDFFG----LPAVCPNA-----VVGPYKSRFGYTPGNADSVIAAITQALEAPR----------V 355 (406)
T ss_dssp SCCCTTHHHHCHHHHHHHHHT----CCEEEEGG-----GTCSCSSEEEECTTCHHHHHHHHHHHHHCCC----------C
T ss_pred ccCchHHHHHHHHHHHHhhCC----CcEEEehh-----cccCcceEEEeCCCCHHHHHHHHHHHHhCcc----------h
Confidence 99999999999 996 78998876 22 567999 999999999999999998875 1
Q ss_pred HHHHhcCHHHHHHHHHHH
Q 003145 541 THVTTHTAQEWAETFVSE 558 (844)
Q Consensus 541 ~~v~~~~~~~W~~~fl~~ 558 (844)
+..+.++|+..++++++.
T Consensus 356 ~~~~~~sw~~~a~~~~~~ 373 (406)
T 2hy7_A 356 RYRQCLNWSDTTDRVLDP 373 (406)
T ss_dssp CCSCCCBHHHHHHHHHCG
T ss_pred hhhhcCCHHHHHHHHHHh
Confidence 345778999999888765
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=2e-17 Score=184.07 Aligned_cols=277 Identities=13% Similarity=0.117 Sum_probs=176.8
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhh-h-cCCEEEEecHHHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV-L-AADLVGFHTYDYARHFVSACTR 308 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~l-l-~aDlIgf~t~~~~~~Fl~~~~~ 308 (844)
..|+|++|+.....++..+-.+..++|+.+..|... +...+. ++...+.+.+ . .+|.+...+....+.|..
T Consensus 86 ~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~~l~~---- 158 (384)
T 1vgv_A 86 KPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLR-TGDLYS--PWPEEANRTLTGHLAMYHFSPTETSRQNLLR---- 158 (384)
T ss_dssp CCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCC-CSCTTS--STTHHHHHHHHHTTCSEEEESSHHHHHHHHH----
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEecccc-cccccC--CCchHhhHHHHHhhccEEEcCcHHHHHHHHH----
Confidence 359999997533334433333345788887766432 211111 1222233332 2 389998888766655532
Q ss_pred HhCcccCCCceeeCCeEEEEEEEeccc-ChhHHhhhhcCCchHHHHHHHHHHhC----CC-cEEEEEeccccc-CCHHHH
Q 003145 309 ILGFEGTPEGVEDQGRLTRVAAFPIGI-DSERFIRALEINPVQVHIKELQETFA----GR-KVMLGVDRLDMI-KGIPQK 381 (844)
Q Consensus 309 ~l~~~~~~~~v~~~g~~~~v~v~P~GI-D~~~f~~~~~~~~~~~~~~~lr~~~~----~~-~vil~VdRld~~-KGi~~~ 381 (844)
.|.. ..++.++|+|+ |...+.+....+ .......++++++ ++ .+++++||+.+. ||+..+
T Consensus 159 -~g~~-----------~~~i~vi~n~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~kg~~~l 225 (384)
T 1vgv_A 159 -ENVA-----------DSRIFITGNTVIDALLWVRDQVMS-SDKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEI 225 (384)
T ss_dssp -TTCC-----------GGGEEECCCHHHHHHHHHHHHTTT-CHHHHHHHHTTCTTCCTTSEEEEEECCCBSSCCHHHHHH
T ss_pred -cCCC-----------hhhEEEeCChHHHHHHhhhhcccc-chhhhHHHHHhccccCCCCCEEEEEeCCccccchHHHHH
Confidence 2321 13577889995 543332211000 0001123455432 33 477899999987 999999
Q ss_pred HHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCc
Q 003145 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (844)
Q Consensus 382 l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~AD 461 (844)
++|+.++.+++|++ .|++++.+ ++ +++++++++++. . ..|.+ .+.++++++..+|+.||
T Consensus 226 i~a~~~l~~~~~~~----~l~i~~g~----~~---~~~~~l~~~~~~-------~--~~v~~-~g~~~~~~~~~~~~~ad 284 (384)
T 1vgv_A 226 CHALADIATTHQDI----QIVYPVHL----NP---NVREPVNRILGH-------V--KNVIL-IDPQEYLPFVWLMNHAW 284 (384)
T ss_dssp HHHHHHHHHHCTTE----EEEEECCB----CH---HHHHHHHHHHTT-------C--TTEEE-ECCCCHHHHHHHHHHCS
T ss_pred HHHHHHHHhhCCCe----EEEEEcCC----CH---HHHHHHHHHhhc-------C--CCEEE-eCCCCHHHHHHHHHhCc
Confidence 99999999888864 36554321 22 234455544321 0 13664 67888899999999999
Q ss_pred EEEEcCCCcCCChhHhhhhhcccCCCceEEEeCC-CCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHH
Q 003145 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF-AGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWH 538 (844)
Q Consensus 462 v~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~-~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~ 538 (844)
+||.|| |.+++|||||| .|+|+|.. +|..+.+ | +|++|+| |+++++++|.++|++ ++.+.++.++
T Consensus 285 ~~v~~S-----g~~~lEA~a~G----~PvI~~~~~~~~~e~v~~g-~g~lv~~-d~~~la~~i~~ll~d-~~~~~~~~~~ 352 (384)
T 1vgv_A 285 LILTDS-----GGIQEEAPSLG----KPVLVMRDTTERPEAVTAG-TVRLVGT-DKQRIVEEVTRLLKD-ENEYQAMSRA 352 (384)
T ss_dssp EEEESS-----STGGGTGGGGT----CCEEEESSCCSCHHHHHHT-SEEEECS-SHHHHHHHHHHHHHC-HHHHHHHHSS
T ss_pred EEEECC-----cchHHHHHHcC----CCEEEccCCCCcchhhhCC-ceEEeCC-CHHHHHHHHHHHHhC-hHHHhhhhhc
Confidence 999999 44589999996 79999987 6666666 5 8999988 999999999999985 4466666666
Q ss_pred HHHHHHhcCHHHHHHHHHHHHH
Q 003145 539 NFTHVTTHTAQEWAETFVSELN 560 (844)
Q Consensus 539 ~~~~v~~~~~~~W~~~fl~~l~ 560 (844)
++++...+++++.++.+++.++
T Consensus 353 ~~~~~~~~~~~~i~~~~~~~~~ 374 (384)
T 1vgv_A 353 HNPYGDGQACSRILEALKNNRI 374 (384)
T ss_dssp CCTTCCSCHHHHHHHHHHHTCC
T ss_pred cCCCcCCCHHHHHHHHHHHHHH
Confidence 6666666777777766655443
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.75 E-value=1.2e-17 Score=185.02 Aligned_cols=271 Identities=14% Similarity=0.128 Sum_probs=176.2
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhh--cCCEEEEecHHHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFVSACTR 308 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll--~aDlIgf~t~~~~~~Fl~~~~~ 308 (844)
..|+|++|......++..+..+..++|+.++.|.. .+...+. ++...+.+.++ .+|.+...+....+.+..
T Consensus 95 ~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~---- 167 (375)
T 3beo_A 95 KPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGL-RTWDKYS--PYPEEMNRQLTGVMADLHFSPTAKSATNLQK---- 167 (375)
T ss_dssp CCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCC-CCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHHHHH----
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccc-ccccccC--CChhHhhhhHHhhhhheeeCCCHHHHHHHHH----
Confidence 35999998753333332222223467887665532 2211111 22334444433 389988888766555532
Q ss_pred HhCcccCCCceeeCCeEEEEEEEecc-cChhHHhhhhcCCchHHHHHHHHHHhCC-CcEEEEEeccccc-CCHHHHHHHH
Q 003145 309 ILGFEGTPEGVEDQGRLTRVAAFPIG-IDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDMI-KGIPQKLLAF 385 (844)
Q Consensus 309 ~l~~~~~~~~v~~~g~~~~v~v~P~G-ID~~~f~~~~~~~~~~~~~~~lr~~~~~-~~vil~VdRld~~-KGi~~~l~Af 385 (844)
.|.. ..++.++|+| +|...|.+..... ..+++++.+ +.+++++||+.+. ||+..+++|+
T Consensus 168 -~g~~-----------~~~i~vi~n~~~d~~~~~~~~~~~------~~~~~~~~~~~~vl~~~gr~~~~~K~~~~li~a~ 229 (375)
T 3beo_A 168 -ENKD-----------ESRIFITGNTAIDALKTTVKETYS------HPVLEKLGNNRLVLMTAHRRENLGEPMRNMFRAI 229 (375)
T ss_dssp -TTCC-----------GGGEEECCCHHHHHHHHHCCSSCC------CHHHHTTTTSEEEEEECCCGGGTTHHHHHHHHHH
T ss_pred -cCCC-----------cccEEEECChhHhhhhhhhhhhhh------HHHHHhccCCCeEEEEecccccchhHHHHHHHHH
Confidence 1221 2357889999 8987775421111 123344433 4467789999986 9999999999
Q ss_pred HHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEE
Q 003145 386 EKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALV 465 (844)
Q Consensus 386 ~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~ 465 (844)
.++.+++|+++ |+ ++.+ ++ .+++++++++++. . ..|++ .+.++..++..+|+.||++|+
T Consensus 230 ~~l~~~~~~~~----~i-~~~g-----~~-~~~~~~~~~~~~~-------~--~~v~~-~g~~~~~~~~~~~~~ad~~v~ 288 (375)
T 3beo_A 230 KRLVDKHEDVQ----VV-YPVH-----MN-PVVRETANDILGD-------Y--GRIHL-IEPLDVIDFHNVAARSYLMLT 288 (375)
T ss_dssp HHHHHHCTTEE----EE-EECC-----SC-HHHHHHHHHHHTT-------C--TTEEE-ECCCCHHHHHHHHHTCSEEEE
T ss_pred HHHHhhCCCeE----EE-EeCC-----CC-HHHHHHHHHHhhc-------c--CCEEE-eCCCCHHHHHHHHHhCcEEEE
Confidence 99988888643 44 3321 11 1344555554321 0 13664 788899999999999999999
Q ss_pred cCCCcCCChhHhhhhhcccCCCceEEEeCC-CCchhhc-cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 003145 466 TSLRDGMNLVSYEFVACQDLKKGVLILSEF-AGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV 543 (844)
Q Consensus 466 ~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~-~G~~~~l-g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v 543 (844)
|| |.+++|||||| .|+|+|.. +|..+.+ ..+|++|+| |++++|++|.+++++ ++.++++.++++++.
T Consensus 289 ~s-----g~~~lEA~a~G----~Pvi~~~~~~~~~e~v~~g~g~~v~~-d~~~la~~i~~ll~~-~~~~~~~~~~~~~~~ 357 (375)
T 3beo_A 289 DS-----GGVQEEAPSLG----VPVLVLRDTTERPEGIEAGTLKLAGT-DEETIFSLADELLSD-KEAHDKMSKASNPYG 357 (375)
T ss_dssp CC-----HHHHHHHHHHT----CCEEECSSCCSCHHHHHTTSEEECCS-CHHHHHHHHHHHHHC-HHHHHHHCCCCCTTC
T ss_pred CC-----CChHHHHHhcC----CCEEEecCCCCCceeecCCceEEcCC-CHHHHHHHHHHHHhC-hHhHhhhhhcCCCCC
Confidence 99 67799999996 78888864 7766666 228999987 999999999999985 446666666666666
Q ss_pred HhcCHHHHHHHHHHH
Q 003145 544 TTHTAQEWAETFVSE 558 (844)
Q Consensus 544 ~~~~~~~W~~~fl~~ 558 (844)
..+++++.++.+.+.
T Consensus 358 ~~~~~~~i~~~~~~~ 372 (375)
T 3beo_A 358 DGRASERIVEAILKH 372 (375)
T ss_dssp CSCHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHH
Confidence 667777777666543
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.69 E-value=9.3e-17 Score=159.90 Aligned_cols=142 Identities=18% Similarity=0.160 Sum_probs=113.4
Q ss_pred CCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCccc
Q 003145 361 AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (844)
Q Consensus 361 ~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~p 440 (844)
.++++|+++||+.+.||+..+++|++.+ |++ .|+++|.+.. ...+++.+.++ +.+.. ..
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~----~l~i~G~~~~-----~~~l~~~~~~~--~~~l~------~~ 79 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL----QDE----KLYIVGWFSK-----GDHAERYARKI--MKIAP------DN 79 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC----TTS----CEEEEBCCCT-----TSTHHHHHHHH--HHHSC------TT
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC----CCc----EEEEEecCcc-----HHHHHHHHHhh--hcccC------Cc
Confidence 3678999999999999999999999876 554 4777775321 12233333211 11110 13
Q ss_pred EEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHH
Q 003145 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA 518 (844)
Q Consensus 441 v~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A 518 (844)
|.+ .|.++.+++..+|+.||++++||..||||++++|||||| .|+|+|..+|..+.+ +.+|+++ |.|+++++
T Consensus 80 v~~-~g~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G----~PvI~~~~~~~~e~i~~~~~g~~~-~~d~~~l~ 153 (177)
T 2f9f_A 80 VKF-LGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASG----KPVIAVNEGGFKETVINEKTGYLV-NADVNEII 153 (177)
T ss_dssp EEE-EESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTT----CCEEEESSHHHHHHCCBTTTEEEE-CSCHHHHH
T ss_pred EEE-eCCCCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcC----CcEEEeCCCCHHHHhcCCCccEEe-CCCHHHHH
Confidence 654 799999999999999999999999999999999999996 899999998888877 5689999 99999999
Q ss_pred HHHHHHhcCCH
Q 003145 519 NAIARALNMSP 529 (844)
Q Consensus 519 ~ai~~aL~m~~ 529 (844)
++|.++++++.
T Consensus 154 ~~i~~l~~~~~ 164 (177)
T 2f9f_A 154 DAMKKVSKNPD 164 (177)
T ss_dssp HHHHHHHHCTT
T ss_pred HHHHHHHhCHH
Confidence 99999998875
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.3e-16 Score=171.44 Aligned_cols=221 Identities=12% Similarity=0.149 Sum_probs=146.6
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHH-------HhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLN-------ALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~-------~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
..|+|+||+||||++.. +++.+..+|. +++..+++.++++|||+...+..++..+++
T Consensus 21 ~~kliifDlDGTLlds~----------------i~~~~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~~~~~~~~~~~~g~ 84 (289)
T 3gyg_A 21 PQYIVFCDFDETYFPHT----------------IDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKMGRGKF 84 (289)
T ss_dssp CSEEEEEETBTTTBCSS----------------CCHHHHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHTTC
T ss_pred CCeEEEEECCCCCcCCC----------------CCcchHHHHHHHHHHHHHHHhcCCcEEEEEcCCCHHHHHHHHHhhcc
Confidence 47899999999999862 4555555555 354557999999999999999988887643
Q ss_pred -----eEEeecceEEEec--CC------eeeecccccCChHHHHHHHHHHHHHHhc-C----CCceEeeccceEEEEeec
Q 003145 663 -----WLAAENGMFLRCT--TG------KWMTTMPEHLNMEWVDSLKHVFEYFTER-T----PRSHFEQRETSLVWNYKY 724 (844)
Q Consensus 663 -----~liaenG~~i~~~--~~------~w~~~~~~~~~~~w~~~v~~i~~~~~~r-t----~gs~iE~k~~sl~~hy~~ 724 (844)
.+++.+|..+... ++ .|...+... ...+.+.++++.+.++ . ..+..+.+...+.++|+.
T Consensus 85 ~~~~~~~i~~~g~~i~~~~~ng~~~~~~~~~~~~~~~---~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~ 161 (289)
T 3gyg_A 85 RYFPHFIASDLGTEITYFSEHNFGQQDNKWNSRINEG---FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQE 161 (289)
T ss_dssp CBCCSEEEETTTTEEEECCSSSTTEECHHHHHHHHTT---CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEEC
T ss_pred CCCCCeEeecCCceEEEEcCCCcEeecCchhhhhccc---CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEec
Confidence 4777777766541 12 122211111 1245677777777554 1 122224455567788887
Q ss_pred CChhhhHHHHHHHHHHHhcCCCCCCCeEEEEc---------CcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEE
Q 003145 725 ADVEFGRIQARDMLQHLWTGPISNASVEVVQG---------SKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLC 795 (844)
Q Consensus 725 ~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g---------~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vla 795 (844)
.++.........+.+.+ ... +....+... ...+|+.|.+.+|+.++.+++++++ ++++.+++
T Consensus 162 ~~~~~~~~~~~~~~~~l-~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~------~~~~~~~~ 232 (289)
T 3gyg_A 162 QDEINDKKNLLAIEKIC-EEY--GVSVNINRCNPLAGDPEDSYDVDFIPIGTGKNEIVTFMLEKYN------LNTERAIA 232 (289)
T ss_dssp CCHHHHHHHHHHHHHHH-HHH--TEEEEEEECCGGGTCCTTEEEEEEEESCCSHHHHHHHHHHHHT------CCGGGEEE
T ss_pred cccccchHHHHHHHHHH-HHc--CCCEEEEEccccccCCCCceEEEEEeCCCCHHHHHHHHHHHcC------CChhhEEE
Confidence 65432111112222222 110 112233332 2689999999999999999999999 78899999
Q ss_pred EeeCCCch--hhc--cCcEEEeCCCCcc---hhhhcCCHHH--HHHHHHHHhh
Q 003145 796 IGHFLGKV--LLT--QFLIQVGSSINSL---SKEKKRKVHQ--LFGIFLRFSY 839 (844)
Q Consensus 796 iGD~~~nD--Mf~--g~~Iavgna~~~~---a~~~l~~~~~--v~~~l~~~~~ 839 (844)
||| +.|| |++ |++|+|||+.+++ |.+...++++ +..+|+++..
T Consensus 233 ~GD-s~~D~~~~~~ag~~~~~~~~~~~~~~~a~~v~~~~~~~gv~~~~~~~~~ 284 (289)
T 3gyg_A 233 FGD-SGNDVRMLQTVGNGYLLKNATQEAKNLHNLITDSEYSKGITNTLKKLIG 284 (289)
T ss_dssp EEC-SGGGHHHHTTSSEEEECTTCCHHHHHHCCCBCSSCHHHHHHHHHHHHTC
T ss_pred EcC-CHHHHHHHHhCCcEEEECCccHHHHHhCCEEcCCCCcCHHHHHHHHHHH
Confidence 999 9999 888 8999999997644 4556677666 7777777654
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=2.1e-15 Score=177.12 Aligned_cols=199 Identities=13% Similarity=0.037 Sum_probs=148.4
Q ss_pred EEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh--CCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEE
Q 003145 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 403 (844)
Q Consensus 326 ~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~ 403 (844)
.++.++|+++++....+..... ..|+++ ++.++++++||+.+ ||++.+|+|+.++++++|+++ |++
T Consensus 344 ~~i~~ipn~~~~~~~~~~~~~~-------~~r~~~~~~~~~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~----l~i 411 (568)
T 2vsy_A 344 EHVLRLQGAFQPSDTSRVVAEP-------PSRTQCGLPEQGVVLCCFNNSY-KLNPQSMARMLAVLREVPDSV----LWL 411 (568)
T ss_dssp SEEEECSSCSCCCCTTCCCCCC-------CCTGGGTCCTTSCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCE----EEE
T ss_pred ceeEcCCCcCCCCCCCCCCCCC-------CCccccCCCCCCEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcE----EEE
Confidence 4688899865543211100000 123334 34567889999999 999999999999999998754 887
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcc
Q 003145 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (844)
Q Consensus 404 i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~ 483 (844)
+|. +++..+ ++++++.+.+.. ...|+ |.|.++.+++..+|+.|||||+||.+ |||++++||||||
T Consensus 412 ~G~----~g~~~~----~l~~~~~~~~l~-----~~~v~-~~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G 476 (568)
T 2vsy_A 412 LSG----PGEADA----RLRAFAHAQGVD-----AQRLV-FMPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWTG 476 (568)
T ss_dssp ECC----STTHHH----HHHHHHHHTTCC-----GGGEE-EECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTT
T ss_pred ecC----CHHHHH----HHHHHHHHcCCC-----hhHEE-eeCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCC
Confidence 762 234433 444444443211 01366 48999999999999999999999999 9999999999996
Q ss_pred cCCCceEEE-------eCCC-------CchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH---Hhc
Q 003145 484 DLKKGVLIL-------SEFA-------GAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV---TTH 546 (844)
Q Consensus 484 ~~~~g~lVl-------Se~~-------G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v---~~~ 546 (844)
.|+|+ |..+ |..+.+ .+ |+++++++|.+++++ ++.+.++.+++++.+ ..|
T Consensus 477 ----~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v-~~-------~~~~la~~i~~l~~~-~~~~~~~~~~~~~~~~~~~~f 543 (568)
T 2vsy_A 477 ----CPVLTTPGETFAARVAGSLNHHLGLDEMN-VA-------DDAAFVAKAVALASD-PAALTALHARVDVLRRASGVF 543 (568)
T ss_dssp ----CCEEBCCCSSGGGSHHHHHHHHHTCGGGB-CS-------SHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHSSTT
T ss_pred ----CCEEeccCCCchHHHHHHHHHHCCChhhh-cC-------CHHHHHHHHHHHhcC-HHHHHHHHHHHHHhhhcCCCC
Confidence 78999 8888 887776 22 899999999999985 456777778888888 779
Q ss_pred CHHHHHHHHHHHHHHhHH
Q 003145 547 TAQEWAETFVSELNDTVV 564 (844)
Q Consensus 547 ~~~~W~~~fl~~l~~~~~ 564 (844)
++...++.+++.++++..
T Consensus 544 ~~~~~~~~~~~~y~~~~~ 561 (568)
T 2vsy_A 544 HMDGFADDFGALLQALAR 561 (568)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999999999988877654
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.62 E-value=6.5e-15 Score=163.47 Aligned_cols=251 Identities=15% Similarity=0.117 Sum_probs=155.2
Q ss_pred HhhCCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhh--cCCEEEEecHHHHHHHH
Q 003145 226 NKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFV 303 (844)
Q Consensus 226 ~~~~~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll--~aDlIgf~t~~~~~~Fl 303 (844)
.+..+ .|+|++|++....++..+..+..++|+.+ .|.++.+...+. ++.....+.++ .+|.+...+....+.+.
T Consensus 87 l~~~~-pDvv~~~~~~~~~~~~~~~a~~~~ip~v~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~ 162 (376)
T 1v4v_A 87 LKEMG-ADYVLVHGDTLTTFAVAWAAFLEGIPVGH-VEAGLRSGNLKE--PFPEEANRRLTDVLTDLDFAPTPLAKANLL 162 (376)
T ss_dssp HHHTT-CSEEEEESSCHHHHHHHHHHHHTTCCEEE-ETCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHHHH
T ss_pred HHHcC-CCEEEEeCChHHHHHHHHHHHHhCCCEEE-EeCCCccccccC--CCchHHHHHHHHHHhceeeCCCHHHHHHHH
Confidence 33344 59999998765555533333334678754 454443222111 12223333322 37888777766555543
Q ss_pred HHHHHHhCcccCCCceeeCCeEEEEEEEecc-cChhHHhhhhcCCchHHHHHHHHHHhC-CCcEEEEEecccccCCHHHH
Q 003145 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIG-IDSERFIRALEINPVQVHIKELQETFA-GRKVMLGVDRLDMIKGIPQK 381 (844)
Q Consensus 304 ~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~G-ID~~~f~~~~~~~~~~~~~~~lr~~~~-~~~vil~VdRld~~KGi~~~ 381 (844)
+ .|.. ..++.++|++ +|...+.+.. ..++++++ ++.+++++||+...||+..+
T Consensus 163 ~-----~g~~-----------~~ki~vi~n~~~d~~~~~~~~---------~~~~~~~~~~~~vl~~~gr~~~~k~~~~l 217 (376)
T 1v4v_A 163 K-----EGKR-----------EEGILVTGQTGVDAVLLAAKL---------GRLPEGLPEGPYVTVTMHRRENWPLLSDL 217 (376)
T ss_dssp T-----TTCC-----------GGGEEECCCHHHHHHHHHHHH---------CCCCTTCCSSCEEEECCCCGGGGGGHHHH
T ss_pred H-----cCCC-----------cceEEEECCchHHHHhhhhhh---------hHHHHhcCCCCEEEEEeCcccchHHHHHH
Confidence 2 1211 2356778875 4544332210 01222233 34566779999999999999
Q ss_pred HHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCc
Q 003145 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (844)
Q Consensus 382 l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~AD 461 (844)
++|++.+.+++|+++ |+++++ +++ .++++++++++. . ..|++ .+.+++.++..+|+.||
T Consensus 218 l~a~~~l~~~~~~~~----lv~~~g----~~~---~~~~~l~~~~~~-------~--~~v~~-~g~~g~~~~~~~~~~ad 276 (376)
T 1v4v_A 218 AQALKRVAEAFPHLT----FVYPVH----LNP---VVREAVFPVLKG-------V--RNFVL-LDPLEYGSMAALMRASL 276 (376)
T ss_dssp HHHHHHHHHHCTTSE----EEEECC----SCH---HHHHHHHHHHTT-------C--TTEEE-ECCCCHHHHHHHHHTEE
T ss_pred HHHHHHHHhhCCCeE----EEEECC----CCH---HHHHHHHHHhcc-------C--CCEEE-ECCCCHHHHHHHHHhCc
Confidence 999999988888753 554422 122 233445554421 0 13664 67888889999999999
Q ss_pred EEEEcCCCcCCChhHhhhhhcccCCCceEEEeC-CCCchhhc-cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHH
Q 003145 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-FAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHW 537 (844)
Q Consensus 462 v~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe-~~G~~~~l-g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~ 537 (844)
+||.|| +|+ .+|||||| .|+|++. .+|..+.+ +.+|++++ .|++++|++|.++|+++ +.++++.+
T Consensus 277 ~~v~~S--~g~---~lEA~a~G----~PvI~~~~~~~~~~~~~~g~g~lv~-~d~~~la~~i~~ll~d~-~~~~~~~~ 343 (376)
T 1v4v_A 277 LLVTDS--GGL---QEEGAALG----VPVVVLRNVTERPEGLKAGILKLAG-TDPEGVYRVVKGLLENP-EELSRMRK 343 (376)
T ss_dssp EEEESC--HHH---HHHHHHTT----CCEEECSSSCSCHHHHHHTSEEECC-SCHHHHHHHHHHHHTCH-HHHHHHHH
T ss_pred EEEECC--cCH---HHHHHHcC----CCEEeccCCCcchhhhcCCceEECC-CCHHHHHHHHHHHHhCh-Hhhhhhcc
Confidence 999999 543 88999996 7888774 45655555 34688885 59999999999999854 45555444
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=1.1e-14 Score=160.59 Aligned_cols=249 Identities=13% Similarity=-0.003 Sum_probs=162.5
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHh
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (844)
..|+|++|.....+...++.+ ..++|+.+..|..+|..- ..++. -.+|.+...+..
T Consensus 96 ~pDvv~~~~~~~~~~~~~~~~-~~~~p~v~~~~~~~~~~~--------~~~~~--~~~d~v~~~~~~------------- 151 (364)
T 1f0k_A 96 KPDVVLGMGGYVSGPGGLAAW-SLGIPVVLHEQNGIAGLT--------NKWLA--KIATKVMQAFPG------------- 151 (364)
T ss_dssp CCSEEEECSSTTHHHHHHHHH-HTTCCEEEEECSSSCCHH--------HHHHT--TTCSEEEESSTT-------------
T ss_pred CCCEEEEeCCcCchHHHHHHH-HcCCCEEEEecCCCCcHH--------HHHHH--HhCCEEEecChh-------------
Confidence 459999997543333333333 346888888887665310 11111 135555432211
Q ss_pred CcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCc-EEEEEecccccCCHHHHHHHHH
Q 003145 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRK-VMLGVDRLDMIKGIPQKLLAFE 386 (844)
Q Consensus 311 ~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~-vil~VdRld~~KGi~~~l~Af~ 386 (844)
. +. ++.++|+|||.+.|.+. .. ++.+ .+++ +++++||+.+.||++.+++|++
T Consensus 152 -------~--~~----~~~~i~n~v~~~~~~~~----~~-------~~~~~~~~~~~~il~~~g~~~~~k~~~~li~a~~ 207 (364)
T 1f0k_A 152 -------A--FP----NAEVVGNPVRTDVLALP----LP-------QQRLAGREGPVRVLVVGGSQGARILNQTMPQVAA 207 (364)
T ss_dssp -------S--SS----SCEECCCCCCHHHHTSC----CH-------HHHHTTCCSSEEEEEECTTTCCHHHHHHHHHHHH
T ss_pred -------h--cC----CceEeCCccchhhcccc----hh-------hhhcccCCCCcEEEEEcCchHhHHHHHHHHHHHH
Confidence 0 11 35689999999877431 11 1222 2445 4555679999999999999999
Q ss_pred HHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEc
Q 003145 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 466 (844)
Q Consensus 387 ~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~ 466 (844)
.+.+ ++.++.++++ ++ ++++ .+++.+.+. ..|.+ .|.+ +++..+|+.||++|+|
T Consensus 208 ~l~~-------~~~~l~i~G~----~~-~~~l----~~~~~~~~~-------~~v~~-~g~~--~~~~~~~~~ad~~v~~ 261 (364)
T 1f0k_A 208 KLGD-------SVTIWHQSGK----GS-QQSV----EQAYAEAGQ-------PQHKV-TEFI--DDMAAAYAWADVVVCR 261 (364)
T ss_dssp HHGG-------GEEEEEECCT----TC-HHHH----HHHHHHTTC-------TTSEE-ESCC--SCHHHHHHHCSEEEEC
T ss_pred HhcC-------CcEEEEEcCC----ch-HHHH----HHHHhhcCC-------CceEE-ecch--hhHHHHHHhCCEEEEC
Confidence 8743 2444333322 22 2333 334433321 13554 6776 7899999999999999
Q ss_pred CCCcCCChhHhhhhhcccCCCceEEEeCCCCch-------hhc--cCCeEEECCCC--HHHHHHHHHHHhcCCHHHHHHH
Q 003145 467 SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA-------QSL--GAGAILVNPWN--ITEVANAIARALNMSPEEREKR 535 (844)
Q Consensus 467 S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~-------~~l--g~~g~lvnP~d--~~~~A~ai~~aL~m~~~er~~r 535 (844)
| | +++++|||||| .|+|+|..+|.. +.+ ...|++++|.| ++++|++|.++ +++.+.++
T Consensus 262 s---g-~~~~~EAma~G----~Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l---~~~~~~~~ 330 (364)
T 1f0k_A 262 S---G-ALTVSEIAAAG----LPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW---SRETLLTM 330 (364)
T ss_dssp C---C-HHHHHHHHHHT----CCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC---CHHHHHHH
T ss_pred C---c-hHHHHHHHHhC----CCEEEeeCCCCchhHHHHHHHHHhCCcEEEeccccCCHHHHHHHHHhc---CHHHHHHH
Confidence 9 4 99999999996 899999988753 233 23499999988 99999999988 56677777
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHhHH
Q 003145 536 HWHNFTHVTTHTAQEWAETFVSELNDTVV 564 (844)
Q Consensus 536 ~~~~~~~v~~~~~~~W~~~fl~~l~~~~~ 564 (844)
.+++++++..+++..-++.+++.+++...
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~~ 359 (364)
T 1f0k_A 331 AERARAASIPDATERVANEVSRVARALEH 359 (364)
T ss_dssp HHHHHHTCCTTHHHHHHHHHHHHHTTC--
T ss_pred HHHHHHhhccCHHHHHHHHHHHHHHHHHh
Confidence 78888888888888888888777765543
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=2.3e-14 Score=160.07 Aligned_cols=247 Identities=13% Similarity=0.001 Sum_probs=156.5
Q ss_pred HhhCCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHh-hhcCCEEEEecHHHHHHHHH
Q 003145 226 NKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA-VLAADLVGFHTYDYARHFVS 304 (844)
Q Consensus 226 ~~~~~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~-ll~aDlIgf~t~~~~~~Fl~ 304 (844)
.+..+| |+|+++.++++. .++..... |+.+..+. +.. +. +.+. +-.+|.|..++....+.|..
T Consensus 107 l~~~~p-Div~~~~~~~~~--~~~~~~~~--p~~~~~~~-~~~---------~~-~~~~~~~~~d~ii~~S~~~~~~l~~ 170 (374)
T 2xci_A 107 EELSKP-KALIVVEREFWP--SLIIFTKV--PKILVNAY-AKG---------SL-IEKILSKKFDLIIMRTQEDVEKFKT 170 (374)
T ss_dssp HHHHCC-SEEEEESCCCCH--HHHHHCCS--CEEEEEEC-CCC---------CH-HHHHHHTTCSEEEESCHHHHHHHHT
T ss_pred HHHhCC-CEEEEECccCcH--HHHHHHhC--CEEEEEee-cCc---------hH-HHHHHHHhCCEEEECCHHHHHHHHH
Confidence 334454 899888777653 34433222 55443332 211 11 2222 34689999999887766543
Q ss_pred HHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHH
Q 003145 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 384 (844)
Q Consensus 305 ~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A 384 (844)
+| .. ++.++|+|. |.+... + ++.+ .+++++++++. .||+..+|+|
T Consensus 171 -----~g------------~~-ki~vi~n~~----f~~~~~-~---------~~~l-~~~vi~~~~~~--~k~~~~ll~A 215 (374)
T 2xci_A 171 -----FG------------AK-RVFSCGNLK----FICQKG-K---------GIKL-KGEFIVAGSIH--TGEVEIILKA 215 (374)
T ss_dssp -----TT------------CC-SEEECCCGG----GCCCCC-S---------CCCC-SSCEEEEEEEC--GGGHHHHHHH
T ss_pred -----cC------------CC-eEEEcCCCc----cCCCcC-h---------hhhh-cCCEEEEEeCC--CchHHHHHHH
Confidence 11 12 577888762 221110 0 0011 23677888774 5899999999
Q ss_pred HHHHHHhCcCCCCceEEEEEEcCCCCChHHH-HHHHHHHHHHHHHhhcccC--CCCcccEEEeCCCCCHHHHHHHHHhCc
Q 003145 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEY-QRLTSQVHEIVGRINGRFG--TLTAVPIHHLDRSLDFPALCALYAVTD 461 (844)
Q Consensus 385 f~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~-~~l~~~l~~lv~~IN~~~g--~~~~~pv~~~~~~v~~~el~aly~~AD 461 (844)
|.++.+++|+++ |+++|. +++. ++++ +++.+.+-.+. ..+...|. +.+. .+++..+|+.||
T Consensus 216 ~~~l~~~~p~~~----lvivG~-----g~~~~~~l~----~~~~~~gl~~~~~~~~~~~v~-~~~~--~~dl~~~y~~aD 279 (374)
T 2xci_A 216 FKEIKKTYSSLK----LILVPR-----HIENAKIFE----KKARDFGFKTSFFENLEGDVI-LVDR--FGILKELYPVGK 279 (374)
T ss_dssp HHHHHTTCTTCE----EEEEES-----SGGGHHHHH----HHHHHTTCCEEETTCCCSSEE-ECCS--SSCHHHHGGGEE
T ss_pred HHHHHhhCCCcE----EEEECC-----CHHHHHHHH----HHHHHCCCceEEecCCCCcEE-EECC--HHHHHHHHHhCC
Confidence 999988888764 877763 3432 2444 44444332210 00001244 4553 378999999999
Q ss_pred EEEEcCC-CcCCChhHhhhhhcccCCCceEEEe-CCCCchhhc---cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHH
Q 003145 462 VALVTSL-RDGMNLVSYEFVACQDLKKGVLILS-EFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRH 536 (844)
Q Consensus 462 v~v~~S~-~EG~~Lv~~Eama~~~~~~g~lVlS-e~~G~~~~l---g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~ 536 (844)
++++||. .|++|++++|||||| .|+|++ ...|+.+.+ +.+|.++.|.|++++|++|.++|++ +.|.++.
T Consensus 280 v~vl~ss~~e~gg~~~lEAmA~G----~PVI~~~~~~~~~e~~~~~~~~G~l~~~~d~~~La~ai~~ll~d--~~r~~mg 353 (374)
T 2xci_A 280 IAIVGGTFVNIGGHNLLEPTCWG----IPVIYGPYTHKVNDLKEFLEKEGAGFEVKNETELVTKLTELLSV--KKEIKVE 353 (374)
T ss_dssp EEEECSSSSSSCCCCCHHHHTTT----CCEEECSCCTTSHHHHHHHHHTTCEEECCSHHHHHHHHHHHHHS--CCCCCHH
T ss_pred EEEECCcccCCCCcCHHHHHHhC----CCEEECCCccChHHHHHHHHHCCCEEEeCCHHHHHHHHHHHHhH--HHHHHHH
Confidence 9888764 577899999999995 677765 556666654 2578889899999999999999985 5777788
Q ss_pred HHHHHHHHh
Q 003145 537 WHNFTHVTT 545 (844)
Q Consensus 537 ~~~~~~v~~ 545 (844)
+++++++++
T Consensus 354 ~~ar~~~~~ 362 (374)
T 2xci_A 354 EKSREIKGC 362 (374)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 888887754
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.42 E-value=6.7e-12 Score=141.24 Aligned_cols=258 Identities=15% Similarity=0.156 Sum_probs=159.8
Q ss_pred hhCCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhh--hcCCEEEEecHHHHHHHHH
Q 003145 227 KHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV--LAADLVGFHTYDYARHFVS 304 (844)
Q Consensus 227 ~~~~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~l--l~aDlIgf~t~~~~~~Fl~ 304 (844)
+..+ +|+|++|+.-...+|..+..+..++|+++. |.+..+...+ -|+.+++.+-+ ..+|++...+....++|.+
T Consensus 108 ~~~k-PDvVi~~g~~~~~~~~~~aa~~~~IPv~h~-~ag~rs~~~~--~~~~~~~~r~~~~~~a~~~~~~se~~~~~l~~ 183 (396)
T 3dzc_A 108 SSEQ-PDVVLVHGDTATTFAASLAAYYQQIPVGHV-EAGLRTGNIY--SPWPEEGNRKLTAALTQYHFAPTDTSRANLLQ 183 (396)
T ss_dssp HHHC-CSEEEEETTSHHHHHHHHHHHTTTCCEEEE-TCCCCCSCTT--SSTTHHHHHHHHHHTCSEEEESSHHHHHHHHH
T ss_pred HhcC-CCEEEEECCchhHHHHHHHHHHhCCCEEEE-ECCccccccc--cCCcHHHHHHHHHHhcCEEECCCHHHHHHHHH
Confidence 3344 599999986666666555555668888643 3333222222 13445565554 2479988888887777654
Q ss_pred HHHHHhCcccCCCceeeCCeEEEEEEEec-ccChhHHhhhhc-CCchHHHHHHHHHHhC----CCcEE-EEEeccc-ccC
Q 003145 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPI-GIDSERFIRALE-INPVQVHIKELQETFA----GRKVM-LGVDRLD-MIK 376 (844)
Q Consensus 305 ~~~~~l~~~~~~~~v~~~g~~~~v~v~P~-GID~~~f~~~~~-~~~~~~~~~~lr~~~~----~~~vi-l~VdRld-~~K 376 (844)
.|.+ ..+|.++++ ++|...+.+... .. .....+++++++ +++++ +..+|.. ..|
T Consensus 184 -----~G~~-----------~~ki~vvGn~~~d~~~~~~~~~~~~--~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~ 245 (396)
T 3dzc_A 184 -----ENYN-----------AENIFVTGNTVIDALLAVREKIHTD--MDLQATLESQFPMLDASKKLILVTGHRRESFGG 245 (396)
T ss_dssp -----TTCC-----------GGGEEECCCHHHHHHHHHHHHHHHC--HHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTT
T ss_pred -----cCCC-----------cCcEEEECCcHHHHHHHhhhhcccc--hhhHHHHHHHhCccCCCCCEEEEEECCcccchh
Confidence 2322 224666665 566544332110 00 011245666653 34554 4566764 448
Q ss_pred CHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHH
Q 003145 377 GIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCAL 456 (844)
Q Consensus 377 Gi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~al 456 (844)
++..+++|+..+.+++|++ .++..+.+ .+. +++.++++. +. ...|+ +.+.+++.++..+
T Consensus 246 ~~~~ll~A~~~l~~~~~~~----~~v~~~g~----~~~---~~~~l~~~~---~~------~~~v~-~~~~lg~~~~~~l 304 (396)
T 3dzc_A 246 GFERICQALITTAEQHPEC----QILYPVHL----NPN---VREPVNKLL---KG------VSNIV-LIEPQQYLPFVYL 304 (396)
T ss_dssp HHHHHHHHHHHHHHHCTTE----EEEEECCB----CHH---HHHHHHHHT---TT------CTTEE-EECCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCc----eEEEEeCC----ChH---HHHHHHHHH---cC------CCCEE-EeCCCCHHHHHHH
Confidence 8999999999999888874 35544322 132 334444432 11 12465 4678888999999
Q ss_pred HHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEe-CCCCchhhc-cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHH
Q 003145 457 YAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS-EFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREK 534 (844)
Q Consensus 457 y~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlS-e~~G~~~~l-g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~ 534 (844)
|+.||++|.+| | |++ +||++|+ .|+|++ +.++..+.+ ...+++|.+ |.++++++|.++|+++ +.+.+
T Consensus 305 ~~~ad~vv~~S---G-g~~-~EA~a~G----~PvV~~~~~~~~~e~v~~G~~~lv~~-d~~~l~~ai~~ll~d~-~~~~~ 373 (396)
T 3dzc_A 305 MDRAHIILTDS---G-GIQ-EEAPSLG----KPVLVMRETTERPEAVAAGTVKLVGT-NQQQICDALSLLLTDP-QAYQA 373 (396)
T ss_dssp HHHCSEEEESC---S-GGG-TTGGGGT----CCEEECCSSCSCHHHHHHTSEEECTT-CHHHHHHHHHHHHHCH-HHHHH
T ss_pred HHhcCEEEECC---c-cHH-HHHHHcC----CCEEEccCCCcchHHHHcCceEEcCC-CHHHHHHHHHHHHcCH-HHHHH
Confidence 99999999999 6 655 9999996 788888 555555544 125677765 8999999999999854 34444
Q ss_pred HHHH
Q 003145 535 RHWH 538 (844)
Q Consensus 535 r~~~ 538 (844)
+.++
T Consensus 374 m~~~ 377 (396)
T 3dzc_A 374 MSQA 377 (396)
T ss_dssp HHTS
T ss_pred Hhhc
Confidence 4433
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.31 E-value=3.2e-11 Score=135.99 Aligned_cols=257 Identities=14% Similarity=0.130 Sum_probs=157.0
Q ss_pred hhCCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhh--cCCEEEEecHHHHHHHHH
Q 003145 227 KHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFVS 304 (844)
Q Consensus 227 ~~~~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll--~aDlIgf~t~~~~~~Fl~ 304 (844)
+..+ +|+|++|+.-...++..+..+..++|+++ ++.+.-+...++ |+.+++.+.++ .+|++...+..+.++|.+
T Consensus 111 ~~~k-PD~Vi~~gd~~~~l~~~laA~~~~IPv~h-~~aglrs~~~~~--~~p~~~~r~~~~~~a~~~~~~se~~~~~l~~ 186 (403)
T 3ot5_A 111 AAEN-PDIVLVHGDTTTSFAAGLATFYQQKMLGH-VEAGLRTWNKYS--PFPEEMNRQLTGVMADIHFSPTKQAKENLLA 186 (403)
T ss_dssp HHHC-CSEEEEETTCHHHHHHHHHHHHTTCEEEE-ESCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHHHHH
T ss_pred HHcC-CCEEEEECCchhHHHHHHHHHHhCCCEEE-EECCcccccccc--CCcHHHHHHHHHHhcCEEECCCHHHHHHHHH
Confidence 3344 59999998655555544444445788754 333322222221 33455555543 278888888888888765
Q ss_pred HHHHHhCcccCCCceeeCCeEEEEEEEec-ccChhHHhhhhcCCchHHHHHHHHHHhCCC-cEEEEEecccc-cCCHHHH
Q 003145 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPI-GIDSERFIRALEINPVQVHIKELQETFAGR-KVMLGVDRLDM-IKGIPQK 381 (844)
Q Consensus 305 ~~~~~l~~~~~~~~v~~~g~~~~v~v~P~-GID~~~f~~~~~~~~~~~~~~~lr~~~~~~-~vil~VdRld~-~KGi~~~ 381 (844)
.|.+ ..+|.++++ ++|...+........ ..++++.++ .+++.++|... .|++..+
T Consensus 187 -----~Gi~-----------~~~i~vvGn~~~D~~~~~~~~~~~~------~~~~~l~~~~~vlv~~~r~~~~~~~l~~l 244 (403)
T 3ot5_A 187 -----EGKD-----------PATIFVTGNTAIDALKTTVQKDYHH------PILENLGDNRLILMTAHRRENLGEPMQGM 244 (403)
T ss_dssp -----TTCC-----------GGGEEECCCHHHHHHHHHSCTTCCC------HHHHSCTTCEEEEECCCCHHHHTTHHHHH
T ss_pred -----cCCC-----------cccEEEeCCchHHHHHhhhhhhcch------HHHHhccCCCEEEEEeCcccccCcHHHHH
Confidence 2322 234666654 567655432110000 122223333 45566888754 4789999
Q ss_pred HHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCc
Q 003145 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (844)
Q Consensus 382 l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~AD 461 (844)
++|+.++.+++|++ .++.++.| .+ .+++.+++..+ . ...|. +.+++++.++..+|+.||
T Consensus 245 l~a~~~l~~~~~~~----~~v~~~~~----~~---~~~~~l~~~~~---~------~~~v~-l~~~l~~~~~~~l~~~ad 303 (403)
T 3ot5_A 245 FEAVREIVESREDT----ELVYPMHL----NP---AVREKAMAILG---G------HERIH-LIEPLDAIDFHNFLRKSY 303 (403)
T ss_dssp HHHHHHHHHHCTTE----EEEEECCS----CH---HHHHHHHHHHT---T------CTTEE-EECCCCHHHHHHHHHHEE
T ss_pred HHHHHHHHHhCCCc----eEEEecCC----CH---HHHHHHHHHhC---C------CCCEE-EeCCCCHHHHHHHHHhcC
Confidence 99999999988874 35544332 12 23344443321 1 12355 478889999999999999
Q ss_pred EEEEcCCCcCCChhHhhhhhcccCCCceEEEe-CCCCchhhc-cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 003145 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILS-EFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHN 539 (844)
Q Consensus 462 v~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlS-e~~G~~~~l-g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~ 539 (844)
++|.+| |-+.+||++|+ .|+|++ ..++..+.+ ..++++|.+ |.++++++|.++|.++ +.+.++.+..
T Consensus 304 ~vv~~S-----Gg~~~EA~a~g----~PvV~~~~~~~~~e~v~~g~~~lv~~-d~~~l~~ai~~ll~~~-~~~~~m~~~~ 372 (403)
T 3ot5_A 304 LVFTDS-----GGVQEEAPGMG----VPVLVLRDTTERPEGIEAGTLKLIGT-NKENLIKEALDLLDNK-ESHDKMAQAA 372 (403)
T ss_dssp EEEECC-----HHHHHHGGGTT----CCEEECCSSCSCHHHHHHTSEEECCS-CHHHHHHHHHHHHHCH-HHHHHHHHSC
T ss_pred EEEECC-----ccHHHHHHHhC----CCEEEecCCCcchhheeCCcEEEcCC-CHHHHHHHHHHHHcCH-HHHHHHHhhc
Confidence 999888 33449999996 788887 455544544 237888876 9999999999999854 3444444333
Q ss_pred HH
Q 003145 540 FT 541 (844)
Q Consensus 540 ~~ 541 (844)
..
T Consensus 373 ~~ 374 (403)
T 3ot5_A 373 NP 374 (403)
T ss_dssp CT
T ss_pred Cc
Confidence 33
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.11 E-value=1.7e-10 Score=121.73 Aligned_cols=211 Identities=8% Similarity=0.050 Sum_probs=117.7
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcC---CChhhHHHhhcccCc----
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKNFQEYNL---- 662 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SG---R~~~~l~~~~~~l~l---- 662 (844)
+.|+|+||+||||++. ..+.++++++|++|.+ .|+.|+++|| |+...+.+.+..+++
T Consensus 5 ~~kli~~DlDGTLl~~---------------~~~~~~~~~ai~~l~~-~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~~ 68 (266)
T 3pdw_A 5 TYKGYLIDLDGTMYNG---------------TEKIEEACEFVRTLKD-RGVPYLFVTNNSSRTPKQVADKLVSFDIPATE 68 (266)
T ss_dssp CCSEEEEECSSSTTCH---------------HHHHHHHHHHHHHHHH-TTCCEEEEESCCSSCHHHHHHHHHHTTCCCCG
T ss_pred cCCEEEEeCcCceEeC---------------CEeCccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCH
Confidence 4799999999999975 2356789999999998 5999999988 777777777777654
Q ss_pred -eEEeecceEEEe--cCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHHHHHH
Q 003145 663 -WLAAENGMFLRC--TTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQ 739 (844)
Q Consensus 663 -~liaenG~~i~~--~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el~~ 739 (844)
+++..||+.... ......... .... ..+.+.++.+ |..+........+... +..+......+...
T Consensus 69 ~~ii~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~-----g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 136 (266)
T 3pdw_A 69 EQVFTTSMATAQHIAQQKKDASVY-VIGE----EGIRQAIEEN-----GLTFGGENADFVVVGI--DRSITYEKFAVGCL 136 (266)
T ss_dssp GGEEEHHHHHHHHHHHHCTTCEEE-EESC----HHHHHHHHHT-----TCEECCTTCSEEEECC--CTTCCHHHHHHHHH
T ss_pred HHccCHHHHHHHHHHhhCCCCEEE-EEeC----hhHHHHHHHc-----CCccCCCCCCEEEEeC--CCCCCHHHHHHHHH
Confidence 355555554321 000000011 0011 1222222221 2222111111111111 11111111222223
Q ss_pred HHhcCC---CCCCCeEE------EEc----------CcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCC
Q 003145 740 HLWTGP---ISNASVEV------VQG----------SKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL 800 (844)
Q Consensus 740 ~L~~~~---~~~~~~~v------~~g----------~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~ 800 (844)
.+.... ..+..... ..+ ....|+.+.+..|+.+++.++++++ ++++++++||| +
T Consensus 137 ~l~~~~~~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg------i~~~~~~~iGD-~ 209 (266)
T 3pdw_A 137 AIRNGARFISTNGDIAIPTERGLLPGNGSLTSVLTVSTGVQPVFIGKPESIIMEQAMRVLG------TDVSETLMVGD-N 209 (266)
T ss_dssp HHHTTCEEEESCCCCEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSSHHHHHHHHHHT------CCGGGEEEEES-C
T ss_pred HHHCCCeEEEEcCCceeECCCceEecchHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcC------CChhhEEEECC-C
Confidence 331110 11111110 111 0134667788999999999999999 78999999999 9
Q ss_pred -Cch--hhc--cCcEEEeC----CCCc------chhhhcCCHHHHHHHHH
Q 003145 801 -GKV--LLT--QFLIQVGS----SINS------LSKEKKRKVHQLFGIFL 835 (844)
Q Consensus 801 -~nD--Mf~--g~~Iavgn----a~~~------~a~~~l~~~~~v~~~l~ 835 (844)
.|| |.+ |+++++.+ +.++ .|.+.++++.++..-.+
T Consensus 210 ~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~~~~el~~~~~ 259 (266)
T 3pdw_A 210 YATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAIDSLTEWIPYIE 259 (266)
T ss_dssp TTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEESSGGGGHHHHH
T ss_pred cHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeCCHHHHHHHhh
Confidence 899 777 77666544 3332 36678888888776543
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.02 E-value=6.4e-10 Score=117.38 Aligned_cols=211 Identities=12% Similarity=0.119 Sum_probs=118.2
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcC---CChhhHHHhhcccCc----
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKNFQEYNL---- 662 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SG---R~~~~l~~~~~~l~l---- 662 (844)
+.|+|+||+||||++.. .+.++++++|++|.+ .|+.|+++|| |+...+.+.+..+++
T Consensus 7 ~~kli~~DlDGTLl~~~---------------~~~~~~~~ai~~l~~-~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~~ 70 (268)
T 3qgm_A 7 DKKGYIIDIDGVIGKSV---------------TPIPEGVEGVKKLKE-LGKKIIFVSNNSTRSRRILLERLRSFGLEVGE 70 (268)
T ss_dssp CCSEEEEECBTTTEETT---------------EECHHHHHHHHHHHH-TTCEEEEEECCSSSCHHHHHHHHHHTTCCCCG
T ss_pred cCCEEEEcCcCcEECCC---------------EeCcCHHHHHHHHHH-cCCeEEEEeCcCCCCHHHHHHHHHHCCCCCCH
Confidence 47999999999999762 256789999999998 5999999999 777778788877654
Q ss_pred -eEEeecceEEEe--cCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceE-eeccceEEEEeecCChhhhHHHHHHHH
Q 003145 663 -WLAAENGMFLRC--TTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHF-EQRETSLVWNYKYADVEFGRIQARDML 738 (844)
Q Consensus 663 -~liaenG~~i~~--~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~i-E~k~~sl~~hy~~~d~e~~~~qa~el~ 738 (844)
.+++.||+.... ......... .... ..+...+... |..+ ........+.-......+. ...+..
T Consensus 71 ~~ii~~~~~~~~~~~~~~~~~~~~-~~~~----~~l~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 138 (268)
T 3qgm_A 71 DEILVATYATARFIAREKPNAKVF-TTGE----EGLIEELRLA-----GLEIVDYDEAEYLVVGSNRKINFE--LMTKAL 138 (268)
T ss_dssp GGEEEHHHHHHHHHHHHSTTCEEE-ECCC----HHHHHHHHHT-----TCEECCTTTCSEEEECCCTTCBHH--HHHHHH
T ss_pred HHeeCHHHHHHHHHHhhCCCCeEE-EEcC----HHHHHHHHHc-----CCeecCCCCCCEEEEecCCCCCHH--HHHHHH
Confidence 366666664321 000000000 0011 1112222111 1111 1111111111111111111 111111
Q ss_pred HHHhcC---CCCCCCeEE------EEcC----------cEEEE-EeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEee
Q 003145 739 QHLWTG---PISNASVEV------VQGS----------KSVEV-RAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 798 (844)
Q Consensus 739 ~~L~~~---~~~~~~~~v------~~g~----------~~vEV-~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD 798 (844)
..+... +..+..... ..+. ...|+ ...+..|+.+++.++++++ ++++.+++|||
T Consensus 139 ~~l~~~~~~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~------~~~~~~~~vGD 212 (268)
T 3qgm_A 139 RACLRGIRYIATNPDRIFPAEDGPIPGTGMIIGALYWMTGREPDVVVGKPSEVIMREALDILG------LDAKDVAVVGD 212 (268)
T ss_dssp HHHHHTCEEEESCCCCEEEETTEEEECTHHHHHHHHHHHSCCCSEECSTTSHHHHHHHHHHHT------CCGGGEEEEES
T ss_pred HHHhCCCcEEEEeCCCcccCCCCceeChHHHHHHHHHHhCCCcceecCCCCHHHHHHHHHHhC------CCchhEEEECC
Confidence 222111 011111111 1111 11345 6678889999999999999 78999999999
Q ss_pred CC-Cch--hhc--c---CcEEEeCCCCc-----------chhhhcCCHHHHHHHHH
Q 003145 799 FL-GKV--LLT--Q---FLIQVGSSINS-----------LSKEKKRKVHQLFGIFL 835 (844)
Q Consensus 799 ~~-~nD--Mf~--g---~~Iavgna~~~-----------~a~~~l~~~~~v~~~l~ 835 (844)
+ .|| |.+ | ..|.+|++..+ .+.+.++++.++..+|+
T Consensus 213 -~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~el~~~l~ 267 (268)
T 3qgm_A 213 -QIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKDMVEALE 267 (268)
T ss_dssp -CTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHHHHHTC-
T ss_pred -CchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEECCHHHHHHHHh
Confidence 8 699 665 4 46667776532 35667899999887764
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=8.3e-10 Score=109.94 Aligned_cols=129 Identities=16% Similarity=0.122 Sum_probs=95.3
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCceEEeecc
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENG 669 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~liaenG 669 (844)
..|+|+||+||||++..... ....+....++++..++|++|.+ .|..++|+|||+...+...++.+++.-.- +|
T Consensus 7 ~ik~i~~DlDGTL~~~~~~~----~~~~~~~~~~~~~~~~~l~~L~~-~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~-~~ 80 (180)
T 1k1e_A 7 NIKFVITDVDGVLTDGQLHY----DANGEAIKSFHVRDGLGIKMLMD-ADIQVAVLSGRDSPILRRRIADLGIKLFF-LG 80 (180)
T ss_dssp GCCEEEEECTTTTSCSEEEE----ETTEEEEEEEEHHHHHHHHHHHH-TTCEEEEEESCCCHHHHHHHHHHTCCEEE-ES
T ss_pred CCeEEEEeCCCCcCCCCeee----ccCcceeeeeccchHHHHHHHHH-CCCeEEEEeCCCcHHHHHHHHHcCCceee-cC
Confidence 47899999999999863100 00001123467788999999988 59999999999999988888776542100 00
Q ss_pred eEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCC
Q 003145 670 MFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNA 749 (844)
Q Consensus 670 ~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~~ 749 (844)
T Consensus 81 -------------------------------------------------------------------------------- 80 (180)
T 1k1e_A 81 -------------------------------------------------------------------------------- 80 (180)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCc---chhh
Q 003145 750 SVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINS---LSKE 822 (844)
Q Consensus 750 ~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~---~a~~ 822 (844)
..+|+.+++.++++++ ++++.+++||| +.|| |++ |++++|+|+.+. .|.+
T Consensus 81 ----------------~k~k~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~ 137 (180)
T 1k1e_A 81 ----------------KLEKETACFDLMKQAG------VTAEQTAYIGD-DSVDLPAFAACGTSFAVADAPIYVKNAVDH 137 (180)
T ss_dssp ----------------CSCHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHHHHHSSEEEECTTSCHHHHTTSSE
T ss_pred ----------------CCCcHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHcCCeEEeCCccHHHHhhCCE
Confidence 0579999999999998 67899999999 9999 776 899999998653 3555
Q ss_pred hcCCH
Q 003145 823 KKRKV 827 (844)
Q Consensus 823 ~l~~~ 827 (844)
.+.+.
T Consensus 138 v~~~~ 142 (180)
T 1k1e_A 138 VLSTH 142 (180)
T ss_dssp ECSSC
T ss_pred EecCC
Confidence 55554
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=2e-09 Score=113.67 Aligned_cols=203 Identities=11% Similarity=0.054 Sum_probs=120.2
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEc---CCChhhHHHhhcccCc---
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQEYNL--- 662 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~l~l--- 662 (844)
.+.+.|+||+||||++.. .+++.++++|++|.+ .|..|+++| ||+...+.+.++.+++
T Consensus 15 ~~~~~v~~DlDGTLl~~~---------------~~~~~~~~~l~~l~~-~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~~ 78 (271)
T 1vjr_A 15 DKIELFILDMDGTFYLDD---------------SLLPGSLEFLETLKE-KNKRFVFFTNNSSLGAQDYVRKLRNMGVDVP 78 (271)
T ss_dssp GGCCEEEECCBTTTEETT---------------EECTTHHHHHHHHHH-TTCEEEEEESCTTSCHHHHHHHHHHTTCCCC
T ss_pred cCCCEEEEcCcCcEEeCC---------------EECcCHHHHHHHHHH-cCCeEEEEECCCCCCHHHHHHHHHHcCCCCC
Confidence 357889999999999762 366889999999988 599999999 9999999988887743
Q ss_pred --eEEeecceEEEe-----cCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHH
Q 003145 663 --WLAAENGMFLRC-----TTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQAR 735 (844)
Q Consensus 663 --~liaenG~~i~~-----~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~ 735 (844)
.++++||+.+.. ....... ... ..+.+.++.+ |..+........+...... .....+.
T Consensus 79 ~~~ii~~~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~l~~~-----g~~~~~~~~~~~~~~~~~~--~~~~~~~ 143 (271)
T 1vjr_A 79 DDAVVTSGEITAEHMLKRFGRCRIFL----LGT----PQLKKVFEAY-----GHVIDEENPDFVVLGFDKT--LTYERLK 143 (271)
T ss_dssp GGGEEEHHHHHHHHHHHHHCSCEEEE----ESC----HHHHHHHHHT-----TCEECSSSCSEEEECCCTT--CCHHHHH
T ss_pred hhhEEcHHHHHHHHHHHhCCCCeEEE----EcC----HHHHHHHHHc-----CCccCCCCCCEEEEeCCCC--cCHHHHH
Confidence 367777764331 0111100 011 1122222221 1111111111111111111 1111223
Q ss_pred HHHHHHhcCCCCCCCeEEEEcC------------------------cEEEE-EeCCCCHHHHHHHHHHHhcccCcCCCCC
Q 003145 736 DMLQHLWTGPISNASVEVVQGS------------------------KSVEV-RAVGVTKGAAIDRILAEIVHSKKMKTAI 790 (844)
Q Consensus 736 el~~~L~~~~~~~~~~~v~~g~------------------------~~vEV-~p~gvnKG~al~~Ll~~l~~~~~~~~~~ 790 (844)
++++.+ .. +..+ +.+.. ...|. .+.+.+|+.+++.++++++ +++
T Consensus 144 ~~l~~l-~~---~~~~-i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lg------i~~ 212 (271)
T 1vjr_A 144 KACILL-RK---GKFY-IATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFG------VPK 212 (271)
T ss_dssp HHHHHH-TT---TCEE-EESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHT------CCG
T ss_pred HHHHHH-HC---CCeE-EEECCCccccCCCCccccccHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhC------CCC
Confidence 344444 21 1111 11110 12355 7788999999999999999 789
Q ss_pred ceEEEEeeCC-Cch--hhc--cCcEEE-eCCCC---c------chhhhcCCHHHHHHHH
Q 003145 791 DYVLCIGHFL-GKV--LLT--QFLIQV-GSSIN---S------LSKEKKRKVHQLFGIF 834 (844)
Q Consensus 791 d~vlaiGD~~-~nD--Mf~--g~~Iav-gna~~---~------~a~~~l~~~~~v~~~l 834 (844)
+++++||| + .|| |.+ |+++++ ..+.. + .+.+.++++.++..+|
T Consensus 213 ~e~i~iGD-~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el~~~l 270 (271)
T 1vjr_A 213 ERMAMVGD-RLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAV 270 (271)
T ss_dssp GGEEEEES-CHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred ceEEEECC-CcHHHHHHHHHcCCeEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence 99999999 9 699 777 776654 32211 1 3556788888887765
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.96 E-value=3.2e-10 Score=118.77 Aligned_cols=209 Identities=11% Similarity=0.057 Sum_probs=115.5
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEc---CCChhhHHHhhcccCc----
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQEYNL---- 662 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~l~l---- 662 (844)
..|+|+||+||||++.. + ....+.+.+.++++.|.+ .|..++++| ||+...+.+.+..+++
T Consensus 11 ~~k~i~fDlDGTLl~s~--~---------~~~~~~~~~~~a~~~l~~-~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~~~ 78 (271)
T 2x4d_A 11 GVRGVLLDISGVLYDSG--A---------GGGTAIAGSVEAVARLKR-SRLKVRFCTNESAASRAELVGQLQRLGFDISE 78 (271)
T ss_dssp TCCEEEECCBTTTEECC--T---------TTCEECTTHHHHHHHHHH-SSSEEEEECCCCSSCHHHHHHHHHHTTCCCCG
T ss_pred cCCEEEEeCCCeEEecC--C---------CCCccCcCHHHHHHHHHH-CCCcEEEEECCCCCCHHHHHHHHHHCCCCCCH
Confidence 47899999999999852 0 012356788999999987 599999999 9999988888877543
Q ss_pred -eEEeecceEEEe--cCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHHHHHH
Q 003145 663 -WLAAENGMFLRC--TTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQ 739 (844)
Q Consensus 663 -~liaenG~~i~~--~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el~~ 739 (844)
.+++.+|..+.. ....+....+ .+.+.++++.... ......+ +...+..+......+.++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~~~---------~~~~~~~-~~~~~~~~~~~~~~~~l~ 141 (271)
T 2x4d_A 79 QEVTAPAPAACQILKERGLRPYLLI-------HDGVRSEFDQIDT---------SNPNCVV-IADAGESFSYQNMNNAFQ 141 (271)
T ss_dssp GGEECHHHHHHHHHHHHTCCEEEEC-------CGGGGGGGTTSCC---------SSCSEEE-ECCCGGGCCHHHHHHHHH
T ss_pred HHeecHHHHHHHHHHHcCCEEEEEe-------CHHHHHHHHHcCC---------CCCCEEE-EecCCCCcCHHHHHHHHH
Confidence 245555542211 0000000000 0001111111100 0000000 000000000111122222
Q ss_pred HHhcCCCCCCCeEEEE------------------------cCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEE
Q 003145 740 HLWTGPISNASVEVVQ------------------------GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLC 795 (844)
Q Consensus 740 ~L~~~~~~~~~~~v~~------------------------g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vla 795 (844)
.+... ....+ +.. .....|+.+.+.+|+.+++.+++++| ++++.+++
T Consensus 142 ~l~~~--~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lg------i~~~~~i~ 212 (271)
T 2x4d_A 142 VLMEL--EKPVL-ISLGKGRYYAATSGLMLDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIG------VEAHQAVM 212 (271)
T ss_dssp HHHHC--SSCCE-EEECCCSEEEETTEEEECHHHHHHHHHHHHTCCCEEESTTCHHHHHHHHHHHT------CCGGGEEE
T ss_pred HHHhc--CCCeE-EEEcCCcccccCCCcccChhHHHHHHHHHhCCceeeccCCCHHHHHHHHHHhC------CCcceEEE
Confidence 22111 00011 000 01123567778899999999999999 78999999
Q ss_pred EeeCCC-ch--hhc--cCcEE-EeCC--CC-------cchhhhcCCHHHHHHHHHHH
Q 003145 796 IGHFLG-KV--LLT--QFLIQ-VGSS--IN-------SLSKEKKRKVHQLFGIFLRF 837 (844)
Q Consensus 796 iGD~~~-nD--Mf~--g~~Ia-vgna--~~-------~~a~~~l~~~~~v~~~l~~~ 837 (844)
||| +. || |++ |++++ |..+ .+ ..+.+.++++.++..+|...
T Consensus 213 iGD-~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~ 268 (271)
T 2x4d_A 213 IGD-DIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLLLQH 268 (271)
T ss_dssp EES-CTTTTHHHHHHTTCEEEEESSTTCCGGGGGCSSCCCSEEESSHHHHHHHHHHH
T ss_pred ECC-CcHHHHHHHHHCCCcEEEEcCCCCCchhhcccCCCCCEEeCCHHHHHHHHHhh
Confidence 999 87 99 777 77655 3332 11 12566799999998887654
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=2.2e-08 Score=110.03 Aligned_cols=246 Identities=13% Similarity=0.052 Sum_probs=152.8
Q ss_pred HHhhCCCCCEEEEeCccch--hH-HHHHHhc-CCCCeEEEEEecCCCChhhhhcCCccHHHHH-hhhcCCEEEEecHHHH
Q 003145 225 VNKHYKDGDVVWCHDYHLM--FL-PKCLKEY-NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLR-AVLAADLVGFHTYDYA 299 (844)
Q Consensus 225 i~~~~~~~DiVwvHDyhl~--ll-p~~lr~~-~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~-~ll~aDlIgf~t~~~~ 299 (844)
+...++++|+|+++-..+. .+ ..+++.. ..++++.+..|--||-.- ..-+.....-+ .+-.||.|..++....
T Consensus 68 ~~~~~~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~~--~~~~~~~~~E~~~y~~aD~Ii~~S~~~~ 145 (339)
T 3rhz_A 68 IVAGLRHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLMF--SGNFYLMDRTIAYYNKADVVVAPSQKMI 145 (339)
T ss_dssp HTTTCCTTCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHHC--GGGGGGHHHHHHHHTTCSEEEESCHHHH
T ss_pred HHhcCCCCCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhhC--ccchhhHHHHHHHHHHCCEEEECCHHHH
Confidence 5567889999999876653 22 2334432 238999999998766221 00011111112 2346999999998766
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeEEEEEEEeccc-ChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCH
Q 003145 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGI-DSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGI 378 (844)
Q Consensus 300 ~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GI-D~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi 378 (844)
+.+.+ .|.+ ..++. +.++ |... + .+. ....++++|+++||+....++
T Consensus 146 ~~l~~-----~G~~-----------~~ki~--~~~~~~~~~--~---~~~---------~~~~~~~~i~yaG~l~k~~~L 193 (339)
T 3rhz_A 146 DKLRD-----FGMN-----------VSKTV--VQGMWDHPT--Q---APM---------FPAGLKREIHFPGNPERFSFV 193 (339)
T ss_dssp HHHHH-----TTCC-----------CSEEE--ECCSCCCCC--C---CCC---------CCCEEEEEEEECSCTTTCGGG
T ss_pred HHHHH-----cCCC-----------cCcee--ecCCCCccC--c---ccc---------cccCCCcEEEEeCCcchhhHH
Confidence 55443 1221 12332 3333 2110 0 000 011246789999999853222
Q ss_pred HHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHH
Q 003145 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 458 (844)
Q Consensus 379 ~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 458 (844)
.. + .|+ +.|+++|.+... + .. .|+| .|.++.+|++.+|+
T Consensus 194 ~~----l------~~~----~~f~ivG~G~~~-----------------~-------l~--nV~f-~G~~~~~el~~~l~ 232 (339)
T 3rhz_A 194 KE----W------KYD----IPLKVYTWQNVE-----------------L-------PQ--NVHK-INYRPDEQLLMEMS 232 (339)
T ss_dssp GG----C------CCS----SCEEEEESCCCC-----------------C-------CT--TEEE-EECCCHHHHHHHHH
T ss_pred Hh----C------CCC----CeEEEEeCCccc-----------------C-------cC--CEEE-eCCCCHHHHHHHHH
Confidence 11 1 354 448888854310 0 11 3665 79999999999999
Q ss_pred hCcEEEEcCCCcC---------CChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcC
Q 003145 459 VTDVALVTSLRDG---------MNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNM 527 (844)
Q Consensus 459 ~ADv~v~~S~~EG---------~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m 527 (844)
.||+.++. .++ ++..+.|||||| .|+|++..++.++.+ +..|+.++ +.++++++|..+
T Consensus 233 ~~~~~lv~--~~~~~~~y~~~~~P~Kl~eymA~G----~PVI~~~~~~~~~~v~~~~~G~~~~--~~~e~~~~i~~l--- 301 (339)
T 3rhz_A 233 QGGFGLVW--MDDKDKEYQSLYCSYKLGSFLAAG----IPVIVQEGIANQELIENNGLGWIVK--DVEEAIMKVKNV--- 301 (339)
T ss_dssp TEEEEECC--CCGGGHHHHTTCCCHHHHHHHHHT----CCEEEETTCTTTHHHHHHTCEEEES--SHHHHHHHHHHC---
T ss_pred hCCEEEEE--CCCchhHHHHhcChHHHHHHHHcC----CCEEEccChhHHHHHHhCCeEEEeC--CHHHHHHHHHHh---
Confidence 99999987 233 467899999996 799999998888887 45789887 578888888753
Q ss_pred CHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 003145 528 SPEEREKRHWHNFTHVTTHTAQEWAETFV 556 (844)
Q Consensus 528 ~~~er~~r~~~~~~~v~~~~~~~W~~~fl 556 (844)
.++++.++.+++++..+..++....++-|
T Consensus 302 ~~~~~~~m~~na~~~a~~~~~~~f~k~~l 330 (339)
T 3rhz_A 302 NEDEYIELVKNVRSFNPILRKGFFTRRLL 330 (339)
T ss_dssp CHHHHHHHHHHHHHHTHHHHTTHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 56677777777777766554444444443
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=98.83 E-value=5.6e-09 Score=110.16 Aligned_cols=67 Identities=6% Similarity=0.160 Sum_probs=55.1
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEc---CCChhhHHHhhcccCc----
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQEYNL---- 662 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~l~l---- 662 (844)
+.|+|+||+||||++. ...+ ++++++|++|.+ .|..|+++| ||+...+.+.+..+++
T Consensus 4 ~~kli~~DlDGTLl~~--------------~~~i-~~~~eal~~l~~-~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~ 67 (264)
T 3epr_A 4 AYKGYLIDLDGTIYKG--------------KSRI-PAGERFIERLQE-KGIPYMLVTNNTTRTPESVQEMLRGFNVETPL 67 (264)
T ss_dssp CCCEEEECCBTTTEET--------------TEEC-HHHHHHHHHHHH-HTCCEEEEECCCSSCHHHHHHHHHTTTCCCCG
T ss_pred CCCEEEEeCCCceEeC--------------CEEC-cCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHCCCCCCh
Confidence 4799999999999987 2446 799999999998 599999999 8899888888887754
Q ss_pred -eEEeecceEE
Q 003145 663 -WLAAENGMFL 672 (844)
Q Consensus 663 -~liaenG~~i 672 (844)
.+++.||+.+
T Consensus 68 ~~ii~~~~~~~ 78 (264)
T 3epr_A 68 ETIYTATMATV 78 (264)
T ss_dssp GGEEEHHHHHH
T ss_pred hheecHHHHHH
Confidence 3666666644
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.81 E-value=1.8e-11 Score=134.33 Aligned_cols=204 Identities=8% Similarity=-0.049 Sum_probs=112.5
Q ss_pred HhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCCh---hhHH---Hhh--c
Q 003145 587 LRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR---NVLD---KNF--Q 658 (844)
Q Consensus 587 ~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~---~~l~---~~~--~ 658 (844)
.....|+|+||+||||++.. . .++|.++.. .+..++++|||+. ..+. .++ .
T Consensus 17 ~~~~~kli~fDlDGTLld~~-------------~-------~~~l~~~~~-~g~~~~~~tGR~~~~~~~~~~~~~~~~~~ 75 (332)
T 1y8a_A 17 LYFQGHMFFTDWEGPWILTD-------------F-------ALELCMAVF-NNARFFSNLSEYDDYLAYEVRREGYEAGY 75 (332)
T ss_dssp ---CCCEEEECSBTTTBCCC-------------H-------HHHHHHHHH-CCHHHHHHHHHHHHHHHHTTCCTTCCTTT
T ss_pred hCCCceEEEEECcCCCcCcc-------------H-------HHHHHHHHH-CCCEEEEEcCCCchhhhhhhhccCeechh
Confidence 34457899999999999862 1 167777776 4789999999998 6665 555 4
Q ss_pred ccC--ceEEeecceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceE-eecc----------ceE--EEEee
Q 003145 659 EYN--LWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHF-EQRE----------TSL--VWNYK 723 (844)
Q Consensus 659 ~l~--l~liaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~i-E~k~----------~sl--~~hy~ 723 (844)
.++ ..+++.||+.+...+..+.... . ..+.+.++++...+ .-...+ ..+. ..+ .+...
T Consensus 76 ~l~~~~~~i~~nGa~i~~~~~~~~~~~---~---~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~~~~ 148 (332)
T 1y8a_A 76 TLKLLTPFLAAAGVKNRDVERIAELSA---K---FVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGELHGT 148 (332)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHC---C---BCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEEEEE
T ss_pred hcCCcCeEEEcCCcEEEECCeEeeccC---C---CHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhhccc
Confidence 443 3478889998763211111100 0 12344555555443 111111 1110 000 00000
Q ss_pred cCChh-------hh-------HHHH-----HHHHHHHhcCCCCCCCeEEEEc--CcEEE--EEeCCCCHHHHHHHHHHHh
Q 003145 724 YADVE-------FG-------RIQA-----RDMLQHLWTGPISNASVEVVQG--SKSVE--VRAVGVTKGAAIDRILAEI 780 (844)
Q Consensus 724 ~~d~e-------~~-------~~qa-----~el~~~L~~~~~~~~~~~v~~g--~~~vE--V~p~gvnKG~al~~Ll~~l 780 (844)
..+.+ .. .... .++ +.+ .. + +... ..++| +.|.+++||.+++.+
T Consensus 149 ~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~l-~~~-~~------~-~~~s~~~~~~e~ii~~~g~~K~~al~gi---- 215 (332)
T 1y8a_A 149 EVDFDSIAVPEGLREELLSIIDVIASLSGEELF-RKL-DE------L-FSRSEVRKIVESVKAVGAGEKAKIMRGY---- 215 (332)
T ss_dssp BCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHH-HHH-HH------H-HHSHHHHHHHHTCBCCCHHHHHHHHHHH----
T ss_pred ccchhhhccccccceeEEecCHHHHhhhhHHHH-HHH-HH------H-HhhcCCCceeeEEecCCCCCHHHHHhcc----
Confidence 00000 00 0000 111 222 10 1 2211 12344 889999999999833
Q ss_pred cccCcCCCCCce----EEEEeeCCCch--hhc------cCcEEEeCCCCc---chhhhcCC--HHHHHHHHHHHhhcc
Q 003145 781 VHSKKMKTAIDY----VLCIGHFLGKV--LLT------QFLIQVGSSINS---LSKEKKRK--VHQLFGIFLRFSYSG 841 (844)
Q Consensus 781 ~~~~~~~~~~d~----vlaiGD~~~nD--Mf~------g~~Iavgna~~~---~a~~~l~~--~~~v~~~l~~~~~~~ 841 (844)
+++. +++||| +.|| ||+ +++|+| |+.++ .|.+.+.+ .+.|..+|+++...|
T Consensus 216 --------~~~~~~~~via~GD-s~NDi~ml~~A~~~~g~~vam-na~~~lk~~Ad~v~~~~~~dGV~~~l~~~~~~~ 283 (332)
T 1y8a_A 216 --------CESKGIDFPVVVGD-SISDYKMFEAARGLGGVAIAF-NGNEYALKHADVVIISPTAMSEAKVIELFMERK 283 (332)
T ss_dssp --------HHHHTCSSCEEEEC-SGGGHHHHHHHHHTTCEEEEE-SCCHHHHTTCSEEEECSSTHHHHHHHHHHHHHG
T ss_pred --------ChhhcCceEEEEeC-cHhHHHHHHHHhhcCCeEEEe-cCCHHHHhhCcEEecCCCCCHHHHHHHHHHHcC
Confidence 2455 999999 9999 886 689999 98763 45566655 566777887776544
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=98.80 E-value=9.4e-10 Score=113.21 Aligned_cols=64 Identities=13% Similarity=0.005 Sum_probs=49.5
Q ss_pred EEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCC-Cch--hhc--cCc---EEEeCCC-Cc------chhhhc
Q 003145 760 VEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL-GKV--LLT--QFL---IQVGSSI-NS------LSKEKK 824 (844)
Q Consensus 760 vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~-~nD--Mf~--g~~---Iavgna~-~~------~a~~~l 824 (844)
.|+.+.+.+|+.+++.+++++| ++++++++||| + .|| |++ |++ |.+|++. ++ .|.+.+
T Consensus 169 ~~~~~~~kpk~~~~~~~~~~lg------i~~~~~i~iGD-~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~ 241 (250)
T 2c4n_A 169 RKPFYVGKPSPWIIRAALNKMQ------AHSEETVIVGD-NLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIY 241 (250)
T ss_dssp CCCEECSTTSTHHHHHHHHHHT------CCGGGEEEEES-CTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEE
T ss_pred CCceEeCCCCHHHHHHHHHHcC------CCcceEEEECC-CchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEE
Confidence 4778899999999999999999 78999999999 9 799 887 666 4456654 22 344556
Q ss_pred CCHHHH
Q 003145 825 RKVHQL 830 (844)
Q Consensus 825 ~~~~~v 830 (844)
+++.++
T Consensus 242 ~~~~el 247 (250)
T 2c4n_A 242 PSVAEI 247 (250)
T ss_dssp SSGGGC
T ss_pred CCHHHh
Confidence 666553
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.74 E-value=1.2e-08 Score=101.30 Aligned_cols=61 Identities=15% Similarity=0.138 Sum_probs=49.9
Q ss_pred CCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCc---chhhhcCC------HHHHHHH
Q 003145 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINS---LSKEKKRK------VHQLFGI 833 (844)
Q Consensus 767 vnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~---~a~~~l~~------~~~v~~~ 833 (844)
.+|+.+++.+++.++ ++++.+++||| +.|| |++ +++++|+|+.+. .|.+.+.+ ..++..+
T Consensus 85 ~~k~~~l~~~~~~~~------~~~~~~~~vGD-~~nD~~~~~~ag~~v~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ 157 (176)
T 3mmz_A 85 DRKDLALKQWCEEQG------IAPERVLYVGN-DVNDLPCFALVGWPVAVASAHDVVRGAARAVTTVPGGDGAIREIASW 157 (176)
T ss_dssp SCHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHH
T ss_pred CChHHHHHHHHHHcC------CCHHHEEEEcC-CHHHHHHHHHCCCeEECCChhHHHHHhCCEEecCCCCCcHHHHHHHH
Confidence 679999999999998 78899999999 9999 777 889999998654 35556666 6666666
Q ss_pred H
Q 003145 834 F 834 (844)
Q Consensus 834 l 834 (844)
|
T Consensus 158 l 158 (176)
T 3mmz_A 158 I 158 (176)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=98.74 E-value=2.7e-07 Score=103.16 Aligned_cols=242 Identities=10% Similarity=0.061 Sum_probs=141.3
Q ss_pred hhCCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhh--cCCEEEEecHHHHHHHHH
Q 003145 227 KHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFVS 304 (844)
Q Consensus 227 ~~~~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll--~aDlIgf~t~~~~~~Fl~ 304 (844)
+..+ +|+|.+|+.-...++ .+.....++||++ ++-+..+.+ + ++.+++.+-+. .+|++...+....++|.+
T Consensus 91 ~~~k-PD~Vlv~gd~~~~~a-alaA~~~~IPv~h-~eaglrs~~--~--~~pee~nR~~~~~~a~~~~~~te~~~~~l~~ 163 (385)
T 4hwg_A 91 EKEK-PDAVLFYGDTNSCLS-AIAAKRRKIPIFH-MEAGNRCFD--Q--RVPEEINRKIIDHISDVNITLTEHARRYLIA 163 (385)
T ss_dssp HHHC-CSEEEEESCSGGGGG-HHHHHHTTCCEEE-ESCCCCCSC--T--TSTHHHHHHHHHHHCSEEEESSHHHHHHHHH
T ss_pred HhcC-CcEEEEECCchHHHH-HHHHHHhCCCEEE-EeCCCcccc--c--cCcHHHHHHHHHhhhceeecCCHHHHHHHHH
Confidence 3345 599999985544445 3433345788764 333332211 1 22234444443 378887788877777764
Q ss_pred HHHHHhCcccCCCceeeCCeEEEEEEEec-ccChhHHhhhhcCCchHHHHHHHHHHhC---CCcEEEEEeccc---ccCC
Q 003145 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPI-GIDSERFIRALEINPVQVHIKELQETFA---GRKVMLGVDRLD---MIKG 377 (844)
Q Consensus 305 ~~~~~l~~~~~~~~v~~~g~~~~v~v~P~-GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~vil~VdRld---~~KG 377 (844)
.|.+ ..+|.++++ ++|.-.+.... .....++++++ ++.+++..+|.. ..|+
T Consensus 164 -----~G~~-----------~~~I~vtGnp~~D~~~~~~~~------~~~~~~~~~lgl~~~~~iLvt~hr~e~~~~~~~ 221 (385)
T 4hwg_A 164 -----EGLP-----------AELTFKSGSHMPEVLDRFMPK------ILKSDILDKLSLTPKQYFLISSHREENVDVKNN 221 (385)
T ss_dssp -----TTCC-----------GGGEEECCCSHHHHHHHHHHH------HHHCCHHHHTTCCTTSEEEEEECCC-----CHH
T ss_pred -----cCCC-----------cCcEEEECCchHHHHHHhhhh------cchhHHHHHcCCCcCCEEEEEeCCchhcCcHHH
Confidence 2322 123555543 56654332110 11123455553 344566677854 4478
Q ss_pred HHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHh-hcccCCCCcccEEEeCCCCCHHHHHHH
Q 003145 378 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI-NGRFGTLTAVPIHHLDRSLDFPALCAL 456 (844)
Q Consensus 378 i~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~I-N~~~g~~~~~pv~~~~~~v~~~el~al 456 (844)
+..+++|+.++.+++ ++ .+|... .|. +++.++ +. +. .+ ....|+ +.+.+++.++..+
T Consensus 222 l~~ll~al~~l~~~~-~~----~vv~p~------~p~---~~~~l~----~~~~~-~~--~~~~v~-l~~~lg~~~~~~l 279 (385)
T 4hwg_A 222 LKELLNSLQMLIKEY-NF----LIIFST------HPR---TKKRLE----DLEGF-KE--LGDKIR-FLPAFSFTDYVKL 279 (385)
T ss_dssp HHHHHHHHHHHHHHH-CC----EEEEEE------CHH---HHHHHH----TSGGG-GG--TGGGEE-ECCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHhcC-Ce----EEEEEC------ChH---HHHHHH----HHHHH-hc--CCCCEE-EEcCCCHHHHHHH
Confidence 999999999987765 43 243322 132 233332 22 10 00 112455 4788899999999
Q ss_pred HHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCC-chhhc-cCCeEEECCCCHHHHHHHHHHHhcCCH
Q 003145 457 YAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG-AAQSL-GAGAILVNPWNITEVANAIARALNMSP 529 (844)
Q Consensus 457 y~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G-~~~~l-g~~g~lvnP~d~~~~A~ai~~aL~m~~ 529 (844)
|+.||+++..| |.+..||++++ .|+|+....+ -.+.+ ..++++|.+ |.+++++++.++|+++.
T Consensus 280 ~~~adlvvt~S-----Ggv~~EA~alG----~Pvv~~~~~ter~e~v~~G~~~lv~~-d~~~i~~ai~~ll~d~~ 344 (385)
T 4hwg_A 280 QMNAFCILSDS-----GTITEEASILN----LPALNIREAHERPEGMDAGTLIMSGF-KAERVLQAVKTITEEHD 344 (385)
T ss_dssp HHHCSEEEECC-----TTHHHHHHHTT----CCEEECSSSCSCTHHHHHTCCEECCS-SHHHHHHHHHHHHTTCB
T ss_pred HHhCcEEEECC-----ccHHHHHHHcC----CCEEEcCCCccchhhhhcCceEEcCC-CHHHHHHHHHHHHhChH
Confidence 99999999877 45679999996 6777654433 33444 225677754 99999999999998653
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.71 E-value=1.6e-08 Score=98.40 Aligned_cols=140 Identities=15% Similarity=0.071 Sum_probs=97.3
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCceEEeecc
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENG 669 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~liaenG 669 (844)
..|+|+||+||||++..... ....+....+++.+.++|++|.+ .|..++|+||++...+...++.+++.-.
T Consensus 8 ~~k~v~~DlDGTL~~~~~~~----~~~~~~~~~~~~~~~~~l~~l~~-~g~~~~i~T~~~~~~~~~~l~~~gl~~~---- 78 (162)
T 2p9j_A 8 KLKLLIMDIDGVLTDGKLYY----TEHGETIKVFNVLDGIGIKLLQK-MGITLAVISGRDSAPLITRLKELGVEEI---- 78 (162)
T ss_dssp HCCEEEECCTTTTSCSEEEE----ETTEEEEEEEEHHHHHHHHHHHT-TTCEEEEEESCCCHHHHHHHHHTTCCEE----
T ss_pred ceeEEEEecCcceECCceee----cCCCceeeeecccHHHHHHHHHH-CCCEEEEEeCCCcHHHHHHHHHcCCHhh----
Confidence 47899999999999753100 00001123456788999999987 5999999999999888888876543210
Q ss_pred eEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCC
Q 003145 670 MFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNA 749 (844)
Q Consensus 670 ~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~~ 749 (844)
+ .
T Consensus 79 -------------~-~---------------------------------------------------------------- 80 (162)
T 2p9j_A 79 -------------Y-T---------------------------------------------------------------- 80 (162)
T ss_dssp -------------E-E----------------------------------------------------------------
T ss_pred -------------c-c----------------------------------------------------------------
Confidence 0 0
Q ss_pred CeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCc---chhh
Q 003145 750 SVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINS---LSKE 822 (844)
Q Consensus 750 ~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~---~a~~ 822 (844)
.+..|..+++.++++++ .+++.++++|| +.+| |.+ |++++++++.+. .|.+
T Consensus 81 ---------------~~kp~~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~a~~ag~~~~~~~~~~~~~~~a~~ 138 (162)
T 2p9j_A 81 ---------------GSYKKLEIYEKIKEKYS------LKDEEIGFIGD-DVVDIEVMKKVGFPVAVRNAVEEVRKVAVY 138 (162)
T ss_dssp ---------------CC--CHHHHHHHHHHTT------CCGGGEEEEEC-SGGGHHHHHHSSEEEECTTSCHHHHHHCSE
T ss_pred ---------------CCCCCHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHCCCeEEecCccHHHHhhCCE
Confidence 03468899999999988 67899999999 8899 565 788888887543 4556
Q ss_pred hcCCHHH---HHHHHHHHh
Q 003145 823 KKRKVHQ---LFGIFLRFS 838 (844)
Q Consensus 823 ~l~~~~~---v~~~l~~~~ 838 (844)
.+.+.++ +..+++++.
T Consensus 139 v~~~~~~~g~~~~~~~~~~ 157 (162)
T 2p9j_A 139 ITQRNGGEGALREVAELIH 157 (162)
T ss_dssp ECSSCSSSSHHHHHHHHHH
T ss_pred EecCCCCCcHHHHHHHHHH
Confidence 6666544 434555443
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=6.9e-08 Score=96.68 Aligned_cols=132 Identities=13% Similarity=0.103 Sum_probs=91.4
Q ss_pred HhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCceEEe
Q 003145 587 LRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAA 666 (844)
Q Consensus 587 ~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~lia 666 (844)
+....|+|+||+||||++....- ....+...........+|++|.+ .|..++|+||++...++.+++.+++.-.
T Consensus 22 ~~~~ik~vifD~DGTL~~~~~~~----~~~~~~~~~~~~~d~~~l~~L~~-~g~~v~ivT~~~~~~~~~~l~~lgl~~~- 95 (188)
T 2r8e_A 22 KAENIRLLILDVDGVLSDGLIYM----GNNGEELKAFNVRDGYGIRCALT-SDIEVAIITGRKAKLVEDRCATLGITHL- 95 (188)
T ss_dssp HHHTCSEEEECCCCCCBCSEEEE----ETTSCEEEEEEHHHHHHHHHHHT-TTCEEEEECSSCCHHHHHHHHHHTCCEE-
T ss_pred HHhcCCEEEEeCCCCcCCCCEEe----cCCCcEEEEeecccHHHHHHHHH-CCCeEEEEeCCChHHHHHHHHHcCCcee-
Confidence 45678999999999999742100 00000011122333457888887 5999999999999888877776543210
Q ss_pred ecceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHHHHHHHHhcCCC
Q 003145 667 ENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPI 746 (844)
Q Consensus 667 enG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~ 746 (844)
+
T Consensus 96 ----------------~--------------------------------------------------------------- 96 (188)
T 2r8e_A 96 ----------------Y--------------------------------------------------------------- 96 (188)
T ss_dssp ----------------E---------------------------------------------------------------
T ss_pred ----------------e---------------------------------------------------------------
Confidence 0
Q ss_pred CCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCc---c
Q 003145 747 SNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINS---L 819 (844)
Q Consensus 747 ~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~---~ 819 (844)
+.+..|+.+++.++++++ ++++.+++||| +.|| |++ |++++++++.+. .
T Consensus 97 -----------------~~~kpk~~~~~~~~~~~g------~~~~~~~~iGD-~~~Di~~a~~ag~~~~~~~~~~~~~~~ 152 (188)
T 2r8e_A 97 -----------------QGQSNKLIAFSDLLEKLA------IAPENVAYVGD-DLIDWPVMEKVGLSVAVADAHPLLIPR 152 (188)
T ss_dssp -----------------CSCSCSHHHHHHHHHHHT------CCGGGEEEEES-SGGGHHHHTTSSEEEECTTSCTTTGGG
T ss_pred -----------------cCCCCCHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHCCCEEEecCcCHHHHhc
Confidence 013578999999999998 67899999999 8899 666 888899987553 3
Q ss_pred hhhhcCCH
Q 003145 820 SKEKKRKV 827 (844)
Q Consensus 820 a~~~l~~~ 827 (844)
|.+.+.++
T Consensus 153 ad~v~~~~ 160 (188)
T 2r8e_A 153 ADYVTRIA 160 (188)
T ss_dssp SSEECSSC
T ss_pred CCEEEeCC
Confidence 55566665
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.65 E-value=6.9e-08 Score=95.22 Aligned_cols=52 Identities=13% Similarity=-0.027 Sum_probs=44.0
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCC---cchhhhcCC
Q 003145 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSIN---SLSKEKKRK 826 (844)
Q Consensus 768 nKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~---~~a~~~l~~ 826 (844)
+|+.+++.++++++ ++++.+++||| +.|| |++ +++++|+|+.+ +.|.+...+
T Consensus 83 ~K~~~l~~~~~~~g------i~~~~~~~vGD-~~nDi~~~~~ag~~~a~~na~~~~k~~Ad~v~~~ 141 (168)
T 3ewi_A 83 DKLATVDEWRKEMG------LCWKEVAYLGN-EVSDEECLKRVGLSAVPADACSGAQKAVGYICKC 141 (168)
T ss_dssp CHHHHHHHHHHHTT------CCGGGEEEECC-SGGGHHHHHHSSEEEECTTCCHHHHTTCSEECSS
T ss_pred ChHHHHHHHHHHcC------cChHHEEEEeC-CHhHHHHHHHCCCEEEeCChhHHHHHhCCEEeCC
Confidence 59999999999998 78999999999 9999 777 89999999976 445555544
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=1.4e-07 Score=91.86 Aligned_cols=139 Identities=14% Similarity=0.068 Sum_probs=93.8
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCce-EEeec
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLW-LAAEN 668 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~-liaen 668 (844)
+.|+++||+||||++.......... ...........+|+.|.+ .|..++|+||++...++..+..+++. +...
T Consensus 3 ~ik~vifD~DGTL~~~~~~~~~~~~----~~~~~~~~~~~~l~~l~~-~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~- 76 (164)
T 3e8m_A 3 EIKLILTDIDGVWTDGGMFYDQTGN----EWKKFNTSDSAGIFWAHN-KGIPVGILTGEKTEIVRRRAEKLKVDYLFQG- 76 (164)
T ss_dssp CCCEEEECSTTTTSSSEEEECSSSC----EEEEEEGGGHHHHHHHHH-TTCCEEEECSSCCHHHHHHHHHTTCSEEECS-
T ss_pred cceEEEEcCCCceEcCcEEEcCCCc----EEEEecCChHHHHHHHHH-CCCEEEEEeCCChHHHHHHHHHcCCCEeecc-
Confidence 5789999999999985210000000 011122222336888887 58999999999998888888775431 1100
Q ss_pred ceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHHHHHHHHhcCCCCC
Q 003145 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN 748 (844)
Q Consensus 669 G~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~ 748 (844)
T Consensus 77 -------------------------------------------------------------------------------- 76 (164)
T 3e8m_A 77 -------------------------------------------------------------------------------- 76 (164)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCC---cchh
Q 003145 749 ASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSIN---SLSK 821 (844)
Q Consensus 749 ~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~---~~a~ 821 (844)
.-.|..+++.++++++ ++++.+++||| +.|| |.+ |++++|+|+.+ +.|.
T Consensus 77 -----------------~kpk~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~~~~ag~~~~~~~~~~~~~~~ad 132 (164)
T 3e8m_A 77 -----------------VVDKLSAAEELCNELG------INLEQVAYIGD-DLNDAKLLKRVGIAGVPASAPFYIRRLST 132 (164)
T ss_dssp -----------------CSCHHHHHHHHHHHHT------CCGGGEEEECC-SGGGHHHHTTSSEEECCTTSCHHHHTTCS
T ss_pred -----------------cCChHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHCCCeEEcCChHHHHHHhCc
Confidence 1579999999999998 78899999999 8899 666 88889998764 3455
Q ss_pred hhcCCHH---HHHHHHHHHh
Q 003145 822 EKKRKVH---QLFGIFLRFS 838 (844)
Q Consensus 822 ~~l~~~~---~v~~~l~~~~ 838 (844)
+.+.+.+ .+..+++.+.
T Consensus 133 ~v~~~~~~~g~~~e~~~~ll 152 (164)
T 3e8m_A 133 IFLEKRGGEGVFREFVEKVL 152 (164)
T ss_dssp SCCCCCTTTTHHHHHHHHHT
T ss_pred EEeccCCCCcHHHHHHHHHH
Confidence 5565522 2445555554
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.62 E-value=4.5e-08 Score=98.48 Aligned_cols=61 Identities=16% Similarity=0.200 Sum_probs=47.7
Q ss_pred CCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCc---chhhhcCC------HHHHHHH
Q 003145 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINS---LSKEKKRK------VHQLFGI 833 (844)
Q Consensus 767 vnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~---~a~~~l~~------~~~v~~~ 833 (844)
.+|+.+++.+++.++ ++++.+++||| +.|| |++ |++++|+|+.+. .|.+.+.+ +.++..+
T Consensus 93 kpk~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ 165 (191)
T 3n1u_A 93 VDKRSAYQHLKKTLG------LNDDEFAYIGD-DLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTERTGGRGAVRELCDL 165 (191)
T ss_dssp SSCHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHH
T ss_pred CChHHHHHHHHHHhC------CCHHHEEEECC-CHHHHHHHHHCCCEEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHH
Confidence 478999999999998 78899999999 8899 777 889999998654 34555555 4455554
Q ss_pred H
Q 003145 834 F 834 (844)
Q Consensus 834 l 834 (844)
|
T Consensus 166 l 166 (191)
T 3n1u_A 166 I 166 (191)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.61 E-value=2.4e-07 Score=93.53 Aligned_cols=129 Identities=15% Similarity=0.132 Sum_probs=88.5
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCceEEeec
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAEN 668 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~liaen 668 (844)
.+.|+|+||+||||++....-. ...+........-...|+.|.+ .|..++|+||++...++..++.+++.-
T Consensus 23 ~~ik~vifD~DGtL~d~~~~~~----~~~~~~~~~~~~d~~~l~~L~~-~G~~~~ivT~~~~~~~~~~l~~lgi~~---- 93 (195)
T 3n07_A 23 KQIKLLICDVDGVFSDGLIYMG----NQGEELKTFHTRDGYGVKALMN-AGIEIAIITGRRSQIVENRMKALGISL---- 93 (195)
T ss_dssp HTCCEEEECSTTTTSCSCCEEC----TTSCEECCCCTTHHHHHHHHHH-TTCEEEEECSSCCHHHHHHHHHTTCCE----
T ss_pred hCCCEEEEcCCCCcCCCcEEEc----cCchhhheeecccHHHHHHHHH-CCCEEEEEECcCHHHHHHHHHHcCCcE----
Confidence 4679999999999998421000 0000122233334456888887 599999999998777776666543210
Q ss_pred ceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHHHHHHHHhcCCCCC
Q 003145 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN 748 (844)
Q Consensus 669 G~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~ 748 (844)
.+ .
T Consensus 94 -------------~~---------------------------------------~------------------------- 96 (195)
T 3n07_A 94 -------------IY---------------------------------------Q------------------------- 96 (195)
T ss_dssp -------------EE---------------------------------------C-------------------------
T ss_pred -------------Ee---------------------------------------e-------------------------
Confidence 00 0
Q ss_pred CCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcc---hh
Q 003145 749 ASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSL---SK 821 (844)
Q Consensus 749 ~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~---a~ 821 (844)
..-+|+.+++.++++++ ++++.+++||| +.|| |++ |++++|+|+.+.+ |.
T Consensus 97 ----------------~~k~k~~~~~~~~~~~~------~~~~~~~~vGD-~~nDi~~~~~ag~~va~~na~~~~~~~ad 153 (195)
T 3n07_A 97 ----------------GQDDKVQAYYDICQKLA------IAPEQTGYIGD-DLIDWPVMEKVALRVCVADGHPLLAQRAN 153 (195)
T ss_dssp ----------------SCSSHHHHHHHHHHHHC------CCGGGEEEEES-SGGGHHHHTTSSEEEECTTSCHHHHHHCS
T ss_pred ----------------CCCCcHHHHHHHHHHhC------CCHHHEEEEcC-CHHHHHHHHHCCCEEEECChHHHHHHhCC
Confidence 00379999999999998 78999999999 9999 777 8999999987643 44
Q ss_pred hhcCC
Q 003145 822 EKKRK 826 (844)
Q Consensus 822 ~~l~~ 826 (844)
+.+.+
T Consensus 154 ~v~~~ 158 (195)
T 3n07_A 154 YVTHI 158 (195)
T ss_dssp EECSS
T ss_pred EEEcC
Confidence 44444
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=98.53 E-value=1.8e-07 Score=93.78 Aligned_cols=61 Identities=15% Similarity=0.193 Sum_probs=48.5
Q ss_pred CCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCc---chhhhcCC------HHHHHHH
Q 003145 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINS---LSKEKKRK------VHQLFGI 833 (844)
Q Consensus 767 vnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~---~a~~~l~~------~~~v~~~ 833 (844)
.+|+.+++.+++.++ ++++.+++||| +.|| |++ |++++|+++.+. .|.+.+.+ ..++..+
T Consensus 93 ~~K~~~~~~~~~~~g------~~~~~~~~vGD-~~nDi~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~ 165 (189)
T 3mn1_A 93 EDKLVVLDKLLAELQ------LGYEQVAYLGD-DLPDLPVIRRVGLGMAVANAASFVREHAHGITRAQGGEGAAREFCEL 165 (189)
T ss_dssp SCHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHHHHHSSEEEECTTSCHHHHHTSSEECSSCTTTTHHHHHHHH
T ss_pred CChHHHHHHHHHHcC------CChhHEEEECC-CHHHHHHHHHCCCeEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHH
Confidence 689999999999998 78899999999 9999 666 889999998654 34555666 4555555
Q ss_pred H
Q 003145 834 F 834 (844)
Q Consensus 834 l 834 (844)
|
T Consensus 166 l 166 (189)
T 3mn1_A 166 I 166 (189)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=6.1e-08 Score=97.04 Aligned_cols=61 Identities=10% Similarity=0.109 Sum_probs=47.8
Q ss_pred CCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCc---chhhhcCC--HHHHHHH
Q 003145 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINS---LSKEKKRK--VHQLFGI 833 (844)
Q Consensus 765 ~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~---~a~~~l~~--~~~v~~~ 833 (844)
.+.+|+.++..++++++ ++++.+++||| +.|| |++ |++++|+ +.+. .|.+.+.+ ..++..+
T Consensus 140 ~~~~K~~~l~~~~~~lg------i~~~~~~~iGD-~~~Di~~~~~ag~~~~~~-~~~~~~~~a~~v~~~~~~~~l~~~ 209 (211)
T 1l7m_A 140 KENAKGEILEKIAKIEG------INLEDTVAVGD-GANDISMFKKAGLKIAFC-AKPILKEKADICIEKRDLREILKY 209 (211)
T ss_dssp STTHHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHHHHHCSEEEEES-CCHHHHTTCSEEECSSCGGGGGGG
T ss_pred CCccHHHHHHHHHHHcC------CCHHHEEEEec-ChhHHHHHHHCCCEEEEC-CCHHHHhhcceeecchhHHHHHHh
Confidence 47899999999999998 78999999999 9999 777 8888888 4433 35556666 6665443
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=98.46 E-value=2.1e-07 Score=88.77 Aligned_cols=70 Identities=17% Similarity=0.131 Sum_probs=53.0
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCC---hhhHHHhhcccCc--eE
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD---RNVLDKNFQEYNL--WL 664 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~---~~~l~~~~~~l~l--~l 664 (844)
+.|+|++|+||||++... + ....+.+.++++|++|.+ .|+.|+|+|||+ ...+.+++...++ .+
T Consensus 2 ~~k~i~~DlDGTL~~~~~-~---------~i~~~~~~~~~al~~l~~-~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~ 70 (142)
T 2obb_A 2 NAMTIAVDFDGTIVEHRY-P---------RIGEEIPFAVETLKLLQQ-EKHRLILWSVREGELLDEAIEWCRARGLEFYA 70 (142)
T ss_dssp CCCEEEECCBTTTBCSCT-T---------SCCCBCTTHHHHHHHHHH-TTCEEEECCSCCHHHHHHHHHHHHTTTCCCSE
T ss_pred CCeEEEEECcCCCCCCCC-c---------cccccCHHHHHHHHHHHH-CCCEEEEEeCCCcccHHHHHHHHHHcCCCeEE
Confidence 368999999999998631 1 012345789999999987 599999999998 5667788877644 56
Q ss_pred Eeecce
Q 003145 665 AAENGM 670 (844)
Q Consensus 665 iaenG~ 670 (844)
++.|+-
T Consensus 71 I~~n~P 76 (142)
T 2obb_A 71 ANKDYP 76 (142)
T ss_dssp ESSSST
T ss_pred EEcCCc
Confidence 776643
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=2.1e-06 Score=95.75 Aligned_cols=158 Identities=14% Similarity=0.042 Sum_probs=103.3
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 003145 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (844)
Q Consensus 362 ~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv 441 (844)
...+++++|++. .|+...+..+++.+. +.+ +.++.++.+.. .. ++++ ++. ..|
T Consensus 242 ~~~vlv~~G~~~-~~~~~~~~~~~~~l~-~~~-----~~~~~~~g~~~-~~-------~~l~----~~~--------~~v 294 (412)
T 3otg_A 242 RPLVYLTLGTSS-GGTVEVLRAAIDGLA-GLD-----ADVLVASGPSL-DV-------SGLG----EVP--------ANV 294 (412)
T ss_dssp SCEEEEECTTTT-CSCHHHHHHHHHHHH-TSS-----SEEEEECCSSC-CC-------TTCC----CCC--------TTE
T ss_pred CCEEEEEcCCCC-cCcHHHHHHHHHHHH-cCC-----CEEEEEECCCC-Ch-------hhhc----cCC--------CcE
Confidence 345778899996 667666666666553 322 23444443221 00 0111 000 135
Q ss_pred EEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCC----chhhc--cCCeEEECCC--C
Q 003145 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW--N 513 (844)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G----~~~~l--g~~g~lvnP~--d 513 (844)
.+ .+.++ +..+|+.||+||.+|- ..+++|||+|| .|+|+....+ .++.+ +..|++++|. |
T Consensus 295 ~~-~~~~~---~~~~l~~ad~~v~~~g----~~t~~Ea~a~G----~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~ 362 (412)
T 3otg_A 295 RL-ESWVP---QAALLPHVDLVVHHGG----SGTTLGALGAG----VPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNIS 362 (412)
T ss_dssp EE-ESCCC---HHHHGGGCSEEEESCC----HHHHHHHHHHT----CCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCC
T ss_pred EE-eCCCC---HHHHHhcCcEEEECCc----hHHHHHHHHhC----CCEEecCCchhHHHHHHHHHHcCCEEecCcccCC
Confidence 54 67774 7789999999997762 36899999996 7888855443 45555 4578999887 8
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 003145 514 ITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559 (844)
Q Consensus 514 ~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l 559 (844)
.++++++|.++|+++ +.+.++.+..++....+++.+-++.+.+.+
T Consensus 363 ~~~l~~ai~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 407 (412)
T 3otg_A 363 PDSVSGAAKRLLAEE-SYRAGARAVAAEIAAMPGPDEVVRLLPGFA 407 (412)
T ss_dssp HHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHSCCHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHhCH-HHHHHHHHHHHHHhcCCCHHHHHHHHHHHh
Confidence 999999999999864 455556666677778888877777665444
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=4.6e-07 Score=97.70 Aligned_cols=66 Identities=14% Similarity=0.139 Sum_probs=51.7
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEc---CCChhhHHHhhcccCc----
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQEYNL---- 662 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~l~l---- 662 (844)
+.|+|+||+||||++.. .+.+.+.++|++|.+ .|..|+++| ||+...+.+.+..+++
T Consensus 20 ~~k~i~~D~DGTL~~~~---------------~~~~~~~~~l~~l~~-~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~~~~ 83 (306)
T 2oyc_A 20 RAQGVLFDCDGVLWNGE---------------RAVPGAPELLERLAR-AGKAALFVSNNSRRARPELALRFARLGFGGLR 83 (306)
T ss_dssp HCSEEEECSBTTTEETT---------------EECTTHHHHHHHHHH-TTCEEEEEECCCSSCHHHHHHHHHHTTCCSCC
T ss_pred hCCEEEECCCCcEecCC---------------ccCcCHHHHHHHHHH-CCCeEEEEECCCCCCHHHHHHHHHhcCCCcCC
Confidence 47899999999999752 245789999999998 599999999 6888888887777643
Q ss_pred --eEEeecceE
Q 003145 663 --WLAAENGMF 671 (844)
Q Consensus 663 --~liaenG~~ 671 (844)
.+++.||+.
T Consensus 84 ~~~i~~~~~~~ 94 (306)
T 2oyc_A 84 AEQLFSSALCA 94 (306)
T ss_dssp GGGEEEHHHHH
T ss_pred hhhEEcHHHHH
Confidence 355555543
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=2.7e-06 Score=101.10 Aligned_cols=150 Identities=15% Similarity=0.104 Sum_probs=108.0
Q ss_pred CCcEEEEEecccccCCHHH-HHHHHHHHHH--hCcCCC-CceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCC
Q 003145 362 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFLE--ENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (844)
Q Consensus 362 ~~~vil~VdRld~~KGi~~-~l~Af~~ll~--~~P~~~-~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~ 437 (844)
+..+++.|.|+..-||... ++..+.++++ .+|+.. ..+++|..|.+..++ ...+.+-+.+.+++.-||..=...+
T Consensus 525 d~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~Dp~~~~ 603 (796)
T 1l5w_A 525 QAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY-YLAKNIIFAINKVADVINNDPLVGD 603 (796)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTCTTTGG
T ss_pred CcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhH-HHHHHHHHHHHHHHHHhccccccCC
Confidence 5688899999999999999 8888888865 455421 247787776554443 2234555667888887775211112
Q ss_pred cccEEEeCCCCCHHHHHHHHHhCcEEEEcCC--CcCCChhHhhhhhcccCCCceEEEeCCCCchhhc----c-CCeEEEC
Q 003145 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----G-AGAILVN 510 (844)
Q Consensus 438 ~~pv~~~~~~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l----g-~~g~lvn 510 (844)
...|.| ....+-+--..+|.+||+++.||+ .|.-|+.-+=||.- |.|-+|...|+..++ | .+|+++.
T Consensus 604 ~lKVvf-l~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N-----GaL~iGtLDGanvEi~e~vG~~NgF~FG 677 (796)
T 1l5w_A 604 KLKVVF-LPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALN-----GALTVGTLDGANVEIAEKVGEENIFIFG 677 (796)
T ss_dssp GEEEEE-CSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHT-----TCEEEECSCTTHHHHHHHHCGGGSEECS
T ss_pred ceEEEE-ECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc-----CCeeecCcCCeeeehhhccCCCcEEEec
Confidence 234776 445566666789999999999999 99999999999986 566668887777554 5 5899997
Q ss_pred CCCHHHHHH
Q 003145 511 PWNITEVAN 519 (844)
Q Consensus 511 P~d~~~~A~ 519 (844)
. +.+++.+
T Consensus 678 ~-~~~ev~~ 685 (796)
T 1l5w_A 678 H-TVEQVKA 685 (796)
T ss_dssp C-CHHHHHH
T ss_pred C-CHHHHHH
Confidence 6 7777653
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=98.42 E-value=4.1e-06 Score=86.98 Aligned_cols=66 Identities=15% Similarity=0.016 Sum_probs=48.6
Q ss_pred eCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCC-ch--hhc--cC-cEEEeCCC---------CcchhhhcCCHH
Q 003145 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KV--LLT--QF-LIQVGSSI---------NSLSKEKKRKVH 828 (844)
Q Consensus 764 p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~-nD--Mf~--g~-~Iavgna~---------~~~a~~~l~~~~ 828 (844)
..+-.|+.+++.++++++ ++++.+++||| +. || |.+ |+ +|.|..+. ...+.+.+++..
T Consensus 176 ~~~Kp~~~~~~~~~~~lg------i~~~~~~~iGD-~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~ 248 (259)
T 2ho4_A 176 VVGKPEKTFFLEALRDAD------CAPEEAVMIGD-DCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTCESFP 248 (259)
T ss_dssp ECSTTSHHHHHHHGGGGT------CCGGGEEEEES-CTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEESCHH
T ss_pred EecCCCHHHHHHHHHHcC------CChHHEEEECC-CcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEECCHH
Confidence 345678999999999998 78999999999 87 99 665 43 34454431 123556789999
Q ss_pred HHHHHHHH
Q 003145 829 QLFGIFLR 836 (844)
Q Consensus 829 ~v~~~l~~ 836 (844)
++..+|..
T Consensus 249 ~l~~~l~~ 256 (259)
T 2ho4_A 249 HAVDHILQ 256 (259)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99887754
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=98.41 E-value=2e-05 Score=94.03 Aligned_cols=151 Identities=11% Similarity=0.080 Sum_probs=106.1
Q ss_pred CCcEEEEEecccccCCHHHH-HHHHHHHH--HhCcCCCC-ceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCC
Q 003145 362 GRKVMLGVDRLDMIKGIPQK-LLAFEKFL--EENSDWRG-KVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (844)
Q Consensus 362 ~~~vil~VdRld~~KGi~~~-l~Af~~ll--~~~P~~~~-~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~ 437 (844)
+..+++.|.|+..-||.... +..+.+++ .++|+.-- .+++|..|.+..++ ...+.+-+.+.+++..+|..=...+
T Consensus 549 d~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIkli~~va~~in~Dp~v~~ 627 (824)
T 2gj4_A 549 NSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGY-HMAKMIIKLITAIGDVVNHDPVVGD 627 (824)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHTTCTTTGG
T ss_pred CcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhH-HHHHHHHHHHHHHHHHhccCcccCC
Confidence 56889999999999999998 88888885 35664321 36777776554443 2334556678888888865321122
Q ss_pred cccEEEeCCCCCHHHHHHHHHhCcEEEEcCC--CcCCChhHhhhhhcccCCCceEEEeCCCCchhh----cc-CCeEEEC
Q 003145 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS----LG-AGAILVN 510 (844)
Q Consensus 438 ~~pv~~~~~~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~----lg-~~g~lvn 510 (844)
...|.|+. ..+-+--..+|.+||+++.||+ .|.-|+.-+=||.- |.|-+|..-|+.-+ +| .+|+++.
T Consensus 628 ~lKVvFl~-nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlN-----GaLtigtlDGanvEi~e~vG~~Ngf~FG 701 (824)
T 2gj4_A 628 RLRVIFLE-NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN-----GALTIGTMDGANVEMAEEAGEENFFIFG 701 (824)
T ss_dssp GEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT-----TCEEEECSCTTHHHHHHHHCGGGSEECS
T ss_pred ceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc-----CceEEEEecCccchhhhccCCCCEEEeC
Confidence 23477654 4466666789999999999999 99999999999986 66666777776533 34 4789997
Q ss_pred CCCHHHHHHHH
Q 003145 511 PWNITEVANAI 521 (844)
Q Consensus 511 P~d~~~~A~ai 521 (844)
.. .+++ .++
T Consensus 702 ~~-~~ev-~~l 710 (824)
T 2gj4_A 702 MR-VEDV-DRL 710 (824)
T ss_dssp CC-HHHH-HHH
T ss_pred Cc-HHHH-HHH
Confidence 65 6666 444
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.40 E-value=5.1e-07 Score=92.34 Aligned_cols=54 Identities=17% Similarity=0.072 Sum_probs=44.0
Q ss_pred CCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCc---chhhhcCCH
Q 003145 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINS---LSKEKKRKV 827 (844)
Q Consensus 767 vnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~---~a~~~l~~~ 827 (844)
-+|+.+++.++++++ ++++.+++||| +.|| |++ |++++|+++.+. .|.+.+.++
T Consensus 123 k~K~~~l~~~~~~lg------~~~~~~~~vGD-s~nDi~~~~~ag~~~a~~~~~~~~~~~Ad~v~~~~ 183 (211)
T 3ij5_A 123 SDKLVAYHELLATLQ------CQPEQVAYIGD-DLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRIK 183 (211)
T ss_dssp SSHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSC
T ss_pred CChHHHHHHHHHHcC------cCcceEEEEcC-CHHHHHHHHHCCCEEEeCCccHHHHhhCCEEEeCC
Confidence 479999999999998 78999999999 9999 666 889999998654 344555554
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=98.35 E-value=4.3e-06 Score=99.37 Aligned_cols=150 Identities=13% Similarity=0.164 Sum_probs=107.0
Q ss_pred CCcEEEEEecccccCCHHH-HHHHHHHHHH--hCcCCC-CceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCC
Q 003145 362 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFLE--ENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (844)
Q Consensus 362 ~~~vil~VdRld~~KGi~~-~l~Af~~ll~--~~P~~~-~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~ 437 (844)
+..+++.|.|+..-||... ++..+.++++ ++|+.. ..+++|..|.+..++ ...+.+-+.+.+++.-||..=...+
T Consensus 515 d~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~dp~~~~ 593 (796)
T 2c4m_A 515 ESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGY-VRAKAIIKLINSIADLVNNDPEVSP 593 (796)
T ss_dssp TSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTCTTTTT
T ss_pred CCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhH-HHHHHHHHHHHHHHHHhccccccCC
Confidence 5688899999999999999 8999988875 566421 247787776554443 2334555667888887775211122
Q ss_pred cccEEEeCCCCCHHHHHHHHHhCcEEEEcCC--CcCCChhHhhhhhcccCCCceEEEeCCCCchhhc----c-CCeEEEC
Q 003145 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----G-AGAILVN 510 (844)
Q Consensus 438 ~~pv~~~~~~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l----g-~~g~lvn 510 (844)
...|.|+. ..+-+--..+|.+||+++.||+ .|.-|+.-+=||.- |.|-+|...|+..++ | .+|+++.
T Consensus 594 ~lKVvFl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N-----GaL~iGtLDGanvEi~e~vG~~NgF~FG 667 (796)
T 2c4m_A 594 LLKVVFVE-NYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMN-----GALTLGTMDGANVEIVDSVGEENAYIFG 667 (796)
T ss_dssp TEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHT-----TCEEEEESSTHHHHHHHHHCGGGSEEES
T ss_pred ceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc-----CCeEEeccCCeEeehhhhcCCCcEEEec
Confidence 23477654 4466666789999999999999 99999999999986 566667777777554 5 5899997
Q ss_pred C--CCHHHHH
Q 003145 511 P--WNITEVA 518 (844)
Q Consensus 511 P--~d~~~~A 518 (844)
. .++.++-
T Consensus 668 ~~~~ev~~l~ 677 (796)
T 2c4m_A 668 ARVEELPALR 677 (796)
T ss_dssp CCTTTHHHHH
T ss_pred CchhhHHHHH
Confidence 6 5554443
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.35 E-value=2e-06 Score=87.61 Aligned_cols=198 Identities=10% Similarity=0.045 Sum_probs=107.8
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhH-HHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCceEEee
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDL-KQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAE 667 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~-~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~liae 667 (844)
.+.|+|+||+||||++.. ..+.+.. .++++++.. +...+...+|++....-..+..... ...
T Consensus 23 ~~~k~i~fDlDGTL~d~~--------------~~~~~~~~~~~~~~~g~-~~~~~~~~~g~~~~~~~~~~~~~~~--~~~ 85 (231)
T 3kzx_A 23 KQPTAVIFDWYNTLIDTS--------------INIDRTTFYQVLDQMGY-KNIDLDSIPNSTIPKYLITLLGKRW--KEA 85 (231)
T ss_dssp CCCSEEEECTBTTTEETT--------------SSCCHHHHHHHHHHTTC-CCCCCTTSCTTTHHHHHHHHHGGGH--HHH
T ss_pred CCCCEEEECCCCCCcCCc--------------hhHHHHHHHHHHHHcCC-CHHHHHHHhCccHHHHHHHHhCchH--HHH
Confidence 357999999999999763 3467788 899998876 4667777888875543222211000 000
Q ss_pred cceEEEe-c-CCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHHHHHHHHhcCC
Q 003145 668 NGMFLRC-T-TGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGP 745 (844)
Q Consensus 668 nG~~i~~-~-~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~ 745 (844)
...+... . ....... ...+.+.++++...++ | ..+.+- .+.... .+...++.+ .+
T Consensus 86 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~l~~~--g-------~~~~i~-T~~~~~----~~~~~l~~~--gl 142 (231)
T 3kzx_A 86 TILYENSLEKSQKSDNF-------MLNDGAIELLDTLKEN--N-------ITMAIV-SNKNGE----RLRSEIHHK--NL 142 (231)
T ss_dssp HHHHHHHHHHCCSCCCC-------EECTTHHHHHHHHHHT--T-------CEEEEE-EEEEHH----HHHHHHHHT--TC
T ss_pred HHHHHHHHhhhcccccc-------eECcCHHHHHHHHHHC--C-------CeEEEE-ECCCHH----HHHHHHHHC--Cc
Confidence 0000000 0 0000000 0112234445544432 1 111111 111111 122333333 11
Q ss_pred CCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCc-eEEEEeeCCCch--hhc--cC-cEEEeCCCCcc
Q 003145 746 ISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAID-YVLCIGHFLGKV--LLT--QF-LIQVGSSINSL 819 (844)
Q Consensus 746 ~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d-~vlaiGD~~~nD--Mf~--g~-~Iavgna~~~~ 819 (844)
..-.. .++.+.. ...+..|+.+++.++++++ ++++ .+++||| +.|| |.+ |+ +|.|+++.+..
T Consensus 143 ~~~f~-~i~~~~~----~~~~Kp~~~~~~~~~~~lg------i~~~~~~v~vGD-~~~Di~~a~~aG~~~v~~~~~~~~~ 210 (231)
T 3kzx_A 143 THYFD-SIIGSGD----TGTIKPSPEPVLAALTNIN------IEPSKEVFFIGD-SISDIQSAIEAGCLPIKYGSTNIIK 210 (231)
T ss_dssp GGGCS-EEEEETS----SSCCTTSSHHHHHHHHHHT------CCCSTTEEEEES-SHHHHHHHHHTTCEEEEECC-----
T ss_pred hhhee-eEEcccc----cCCCCCChHHHHHHHHHcC------CCcccCEEEEcC-CHHHHHHHHHCCCeEEEECCCCCCC
Confidence 11111 1222221 2345667899999999999 6788 8999999 8899 666 64 78899987767
Q ss_pred hhhhcCCHHHHHHHHHHHh
Q 003145 820 SKEKKRKVHQLFGIFLRFS 838 (844)
Q Consensus 820 a~~~l~~~~~v~~~l~~~~ 838 (844)
+.+.+++..++..+|.++.
T Consensus 211 ~~~~~~~~~el~~~l~~~l 229 (231)
T 3kzx_A 211 DILSFKNFYDIRNFICQLI 229 (231)
T ss_dssp CCEEESSHHHHHHHHHHHH
T ss_pred CceeeCCHHHHHHHHHHHh
Confidence 7889999999999998875
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.34 E-value=6.7e-07 Score=89.62 Aligned_cols=71 Identities=17% Similarity=0.038 Sum_probs=54.2
Q ss_pred CcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc-c---CcEE--EeCCCC---cchhhhcC
Q 003145 757 SKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT-Q---FLIQ--VGSSIN---SLSKEKKR 825 (844)
Q Consensus 757 ~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~-g---~~Ia--vgna~~---~~a~~~l~ 825 (844)
..+.++.+.+.+|+.+++.+.+.++ ++++.+++||| +.|| |++ | .+|. |+++.+ ..|.+.++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~~~vGD-~~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~~ 209 (219)
T 3kd3_A 137 GSFKELDNSNGACDSKLSAFDKAKG------LIDGEVIAIGD-GYTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVAR 209 (219)
T ss_dssp SBEEEEECTTSTTTCHHHHHHHHGG------GCCSEEEEEES-SHHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEES
T ss_pred CceeccCCCCCCcccHHHHHHHHhC------CCCCCEEEEEC-CHhHHHHHhCCCCcEEEeccCccccHHHHhhcceeeC
Confidence 4456788889999999999999888 67899999999 9999 766 2 2343 344433 34667899
Q ss_pred CHHHHHHHH
Q 003145 826 KVHQLFGIF 834 (844)
Q Consensus 826 ~~~~v~~~l 834 (844)
+..++..+|
T Consensus 210 ~~~el~~~l 218 (219)
T 3kd3_A 210 NVAELASLI 218 (219)
T ss_dssp SHHHHHHHH
T ss_pred CHHHHHHhh
Confidence 999988765
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=4.4e-06 Score=92.59 Aligned_cols=156 Identities=10% Similarity=0.030 Sum_probs=102.1
Q ss_pred CCcEEEEEecccccCCH-HHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCccc
Q 003145 362 GRKVMLGVDRLDMIKGI-PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (844)
Q Consensus 362 ~~~vil~VdRld~~KGi-~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~p 440 (844)
.+.++++.|++...|+. ..+++++... ++.|++ .+++++.+ +..+. +. .+ . ..
T Consensus 218 ~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~----~~v~~~~~-----~~~~~----l~----~~------~--~~ 271 (391)
T 3tsa_A 218 ARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGV----EAVIAVPP-----EHRAL----LT----DL------P--DN 271 (391)
T ss_dssp SEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTE----EEEEECCG-----GGGGG----CT----TC------C--TT
T ss_pred CCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCe----EEEEEECC-----cchhh----cc----cC------C--CC
Confidence 34677778999886666 8888888877 777754 36555432 11111 11 00 0 13
Q ss_pred EEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCC----CCchhhc--cCCeEEECC---
Q 003145 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF----AGAAQSL--GAGAILVNP--- 511 (844)
Q Consensus 441 v~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~----~G~~~~l--g~~g~lvnP--- 511 (844)
|. +.+.++..+ ++..||++|.. |-..+.+|||+|| .|+|+.-. .+.++.+ +..|++++|
T Consensus 272 v~-~~~~~~~~~---ll~~ad~~v~~----~G~~t~~Ea~~~G----~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~ 339 (391)
T 3tsa_A 272 AR-IAESVPLNL---FLRTCELVICA----GGSGTAFTATRLG----IPQLVLPQYFDQFDYARNLAAAGAGICLPDEQA 339 (391)
T ss_dssp EE-ECCSCCGGG---TGGGCSEEEEC----CCHHHHHHHHHTT----CCEEECCCSTTHHHHHHHHHHTTSEEECCSHHH
T ss_pred EE-EeccCCHHH---HHhhCCEEEeC----CCHHHHHHHHHhC----CCEEecCCcccHHHHHHHHHHcCCEEecCcccc
Confidence 55 467777655 45999999953 4456889999996 67777433 3334444 346899998
Q ss_pred -CCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 003145 512 -WNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV 556 (844)
Q Consensus 512 -~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl 556 (844)
.|.++++++|.++|+++. .|.++.+...+......+.+.++.+.
T Consensus 340 ~~~~~~l~~ai~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~ 384 (391)
T 3tsa_A 340 QSDHEQFTDSIATVLGDTG-FAAAAIKLSDEITAMPHPAALVRTLE 384 (391)
T ss_dssp HTCHHHHHHHHHHHHTCTH-HHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHcCHH-HHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 799999999999999764 44444444455566677776666443
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.23 E-value=7e-08 Score=97.34 Aligned_cols=68 Identities=10% Similarity=-0.017 Sum_probs=50.5
Q ss_pred eCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEE----eCCCCcc----hhhhcCCHHHHH
Q 003145 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQV----GSSINSL----SKEKKRKVHQLF 831 (844)
Q Consensus 764 p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iav----gna~~~~----a~~~l~~~~~v~ 831 (844)
+.+..|+.++..++++++ ++++.+++||| +.|| |++ |++++| +++.+++ |.+.+++.+++.
T Consensus 142 ~~~k~~~~~~~~~~~~~~------~~~~~~i~iGD-~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~ 214 (225)
T 3d6j_A 142 THHKPDPEGLLLAIDRLK------ACPEEVLYIGD-STVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLI 214 (225)
T ss_dssp SSCTTSTHHHHHHHHHTT------CCGGGEEEEES-SHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESSGGGGC
T ss_pred CCCCCChHHHHHHHHHhC------CChHHeEEEcC-CHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECCHHHHH
Confidence 345678899999999998 78999999999 8999 777 888777 6655554 667889999999
Q ss_pred HHHHHHh
Q 003145 832 GIFLRFS 838 (844)
Q Consensus 832 ~~l~~~~ 838 (844)
.+|+.+.
T Consensus 215 ~~l~~~~ 221 (225)
T 3d6j_A 215 SVPEDKS 221 (225)
T ss_dssp -------
T ss_pred Hhhhhhc
Confidence 8887654
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=1.3e-05 Score=89.09 Aligned_cols=100 Identities=16% Similarity=0.061 Sum_probs=65.8
Q ss_pred EEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEe----CCCCchhhc--cCCeEEECCC--
Q 003145 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS----EFAGAAQSL--GAGAILVNPW-- 512 (844)
Q Consensus 441 v~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlS----e~~G~~~~l--g~~g~lvnP~-- 512 (844)
|. +.+.++ ...++..||++|. .|-+.+..|||+|| .|+|+. +-.+.++.+ +..|+++++.
T Consensus 286 v~-~~~~~~---~~~ll~~ad~~v~----~gG~~t~~Ea~~~G----~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~ 353 (398)
T 4fzr_A 286 VL-AAGQFP---LSAIMPACDVVVH----HGGHGTTLTCLSEG----VPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQA 353 (398)
T ss_dssp EE-EESCCC---HHHHGGGCSEEEE----CCCHHHHHHHHHTT----CCEEECCCSGGGHHHHHHHHHTTSEEECC----
T ss_pred EE-EeCcCC---HHHHHhhCCEEEe----cCCHHHHHHHHHhC----CCEEecCCchhHHHHHHHHHHcCCEEecCcccC
Confidence 55 367776 4567888999994 44467899999996 677874 333555555 3468999887
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHH
Q 003145 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAE 553 (844)
Q Consensus 513 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 553 (844)
|.++++++|.++|+++. .|.++.+...+....+++...++
T Consensus 354 ~~~~l~~ai~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 393 (398)
T 4fzr_A 354 GVESVLAACARIRDDSS-YVGNARRLAAEMATLPTPADIVR 393 (398)
T ss_dssp ---CHHHHHHHHHHCTH-HHHHHHHHHHHHTTSCCHHHHHH
T ss_pred CHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHcCCCHHHHHH
Confidence 78899999999999764 44444444455556666665554
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.20 E-value=7.2e-07 Score=90.78 Aligned_cols=69 Identities=9% Similarity=-0.023 Sum_probs=54.1
Q ss_pred CCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCC-ch--hhc--c---CcEEEeCCCCc---chhhhcCCHHHHHHHH
Q 003145 766 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KV--LLT--Q---FLIQVGSSINS---LSKEKKRKVHQLFGIF 834 (844)
Q Consensus 766 gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~-nD--Mf~--g---~~Iavgna~~~---~a~~~l~~~~~v~~~l 834 (844)
+-.|+.+++.++++++ ++++.+++||| +. || |.+ | +.|++|++.++ .|.+.+++..++..+|
T Consensus 154 ~kp~~~~~~~~~~~~~------~~~~~~~~vGD-~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~~~~~el~~~l 226 (234)
T 3u26_A 154 FKPHPRIFELALKKAG------VKGEEAVYVGD-NPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIV 226 (234)
T ss_dssp CTTSHHHHHHHHHHHT------CCGGGEEEEES-CTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEESSTHHHHHHH
T ss_pred CCcCHHHHHHHHHHcC------CCchhEEEEcC-CcHHHHHHHHHcCCEEEEECCCCCccccccCCCEeeCCHHHHHHHH
Confidence 4567888999999999 78999999999 85 99 666 5 45666776543 5677899999999999
Q ss_pred HHHhhcc
Q 003145 835 LRFSYSG 841 (844)
Q Consensus 835 ~~~~~~~ 841 (844)
..+.+.|
T Consensus 227 ~~~~~~~ 233 (234)
T 3u26_A 227 DELNGQG 233 (234)
T ss_dssp HHHC---
T ss_pred HHHhhcC
Confidence 9886643
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.16 E-value=2.7e-06 Score=83.69 Aligned_cols=54 Identities=19% Similarity=0.196 Sum_probs=40.8
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCCh
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~ 650 (844)
.|+++||+||||+.....- .. .....++.|.+.++|++|.+ .|..++|+|+++.
T Consensus 1 ~k~v~~D~DGtL~~~~~~~---~~--~~~~~~~~~g~~~~l~~L~~-~g~~~~i~Tn~~~ 54 (179)
T 3l8h_A 1 MKLIILDRDGVVNQDSDAF---VK--SPDEWIALPGSLQAIARLTQ-ADWTVVLATNQSG 54 (179)
T ss_dssp CCEEEECSBTTTBCCCTTC---CC--SGGGCCBCTTHHHHHHHHHH-TTCEEEEEEECTT
T ss_pred CCEEEEcCCCccccCCCcc---CC--CHHHceECcCHHHHHHHHHH-CCCEEEEEECCCc
Confidence 4789999999999763210 00 01245678899999999988 5999999999973
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=98.15 E-value=2.5e-05 Score=91.00 Aligned_cols=172 Identities=9% Similarity=-0.036 Sum_probs=107.8
Q ss_pred CcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEE-EEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 003145 363 RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLL-QIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (844)
Q Consensus 363 ~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv-~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv 441 (844)
..++.+..|+ .|..+..++++.+++++.|+. +.++ .++. +.+... .+.+++.+. .|.. .|
T Consensus 441 ~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s---~L~l~~~g~---~~g~~~-~~~~~~~~~--GI~~--------Rv 501 (631)
T 3q3e_A 441 VVNIGIASTT--MKLNPYFLEALKAIRDRAKVK---VHFHFALGQ---SNGITH-PYVERFIKS--YLGD--------SA 501 (631)
T ss_dssp EEEEEEEECS--TTCCHHHHHHHHHHHHHCSSE---EEEEEEESS---CCGGGH-HHHHHHHHH--HHGG--------GE
T ss_pred eEEEEECCcc--ccCCHHHHHHHHHHHHhCCCc---EEEEEecCC---CchhhH-HHHHHHHHc--CCCc--------cE
Confidence 3455567774 689999999999999999963 2222 2332 122222 222222221 2321 25
Q ss_pred EEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--------cCCeEEECCCC
Q 003145 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--------GAGAILVNPWN 513 (844)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--------g~~g~lvnP~d 513 (844)
. |.+.++.++..++|+.|||||.|+.+.| |++++|||+|| .|+|.....+.+.-+ |-..++| ..|
T Consensus 502 ~-F~g~~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwmG----VPVVTl~G~~~asRvgaSlL~~~GLpE~LI-A~d 574 (631)
T 3q3e_A 502 T-AHPHSPYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTLG----LVGVCKTGAEVHEHIDEGLFKRLGLPEWLI-ANT 574 (631)
T ss_dssp E-EECCCCHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHTT----CCEEEECCSSHHHHHHHHHHHHTTCCGGGE-ESS
T ss_pred E-EcCCCCHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHcC----CCEEeccCCcHHHHhHHHHHHhcCCCccee-cCC
Confidence 5 4789999999999999999999998876 99999999994 455554433333222 3334223 247
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH---hcCHHHHHHHHHHHHHHhH
Q 003145 514 ITEVANAIARALNMSPEEREKRHWHNFTHVT---THTAQEWAETFVSELNDTV 563 (844)
Q Consensus 514 ~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~---~~~~~~W~~~fl~~l~~~~ 563 (844)
.++.++...++.++++ .+.++.+++++... -++ .|.+.|-+.++.+.
T Consensus 575 ~eeYv~~Av~La~D~~-~l~~LR~~Lr~~~~~spLFd--~~~~~~e~~ye~~~ 624 (631)
T 3q3e_A 575 VDEYVERAVRLAENHQ-ERLELRRYIIENNGLNTLFT--GDPRPMGQVFLEKL 624 (631)
T ss_dssp HHHHHHHHHHHHHCHH-HHHHHHHHHHHSCCHHHHTC--SCCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHH-HHHHHHHHHHHHhhhCCCcc--hhHHHHHHHHHHHH
Confidence 8999999888888653 55555455544432 223 45555555555543
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.13 E-value=1.9e-06 Score=87.28 Aligned_cols=69 Identities=14% Similarity=0.036 Sum_probs=56.2
Q ss_pred EeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cC---cEEEeCCCC-----cchhhhcCCHHHH
Q 003145 763 RAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QF---LIQVGSSIN-----SLSKEKKRKVHQL 830 (844)
Q Consensus 763 ~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~---~Iavgna~~-----~~a~~~l~~~~~v 830 (844)
.+.+..|+.+++.++++++ ++++.+++||| +.|| |.+ |+ .|++|++.. ..|.+.+++..++
T Consensus 138 ~~~~kp~~~~~~~~~~~lg------i~~~~~i~iGD-~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el 210 (226)
T 3mc1_A 138 DGKLSTKEDVIRYAMESLN------IKSDDAIMIGD-REYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDEL 210 (226)
T ss_dssp TSSSCSHHHHHHHHHHHHT------CCGGGEEEEES-SHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHH
T ss_pred CCCCCCCHHHHHHHHHHhC------cCcccEEEECC-CHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHH
Confidence 3667899999999999999 78899999999 8899 776 66 777787642 3466789999999
Q ss_pred HHHHHHHh
Q 003145 831 FGIFLRFS 838 (844)
Q Consensus 831 ~~~l~~~~ 838 (844)
..+|....
T Consensus 211 ~~~~~~~~ 218 (226)
T 3mc1_A 211 HKKILELR 218 (226)
T ss_dssp HHHHHTC-
T ss_pred HHHHHHHh
Confidence 99887543
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.12 E-value=1.9e-06 Score=88.09 Aligned_cols=67 Identities=9% Similarity=-0.044 Sum_probs=54.9
Q ss_pred EeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cC---cEEEeCCC-C----cchhhhcCCHHHH
Q 003145 763 RAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QF---LIQVGSSI-N----SLSKEKKRKVHQL 830 (844)
Q Consensus 763 ~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~---~Iavgna~-~----~~a~~~l~~~~~v 830 (844)
.+.+..|+.+++.++++++ ++++.+++||| +.|| |.+ |+ +|++|++. + ..|.+.+++..++
T Consensus 156 ~~~~kp~~~~~~~~~~~lg------~~~~~~i~vGD-~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el 228 (237)
T 4ex6_A 156 VERGKPHPDMALHVARGLG------IPPERCVVIGD-GVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAA 228 (237)
T ss_dssp SSSCTTSSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHH
T ss_pred CCCCCCCHHHHHHHHHHcC------CCHHHeEEEcC-CHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHH
Confidence 4567889999999999999 78999999999 8899 666 66 77888653 2 2567789999999
Q ss_pred HHHHHH
Q 003145 831 FGIFLR 836 (844)
Q Consensus 831 ~~~l~~ 836 (844)
..+|+.
T Consensus 229 ~~~l~~ 234 (237)
T 4ex6_A 229 VTAVLD 234 (237)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 988764
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.11 E-value=5.3e-06 Score=83.43 Aligned_cols=48 Identities=10% Similarity=0.111 Sum_probs=41.1
Q ss_pred EeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCc
Q 003145 763 RAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINS 818 (844)
Q Consensus 763 ~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~ 818 (844)
.+.+.+|+.+++.++++++ ++++.+++||| +.|| |.+ |++++| |+.+.
T Consensus 137 ~~~~k~k~~~~~~~~~~~g------~~~~~~i~vGD-s~~Di~~a~~aG~~~~~-~~~~~ 188 (217)
T 3m1y_A 137 MMFSHSKGEMLLVLQRLLN------ISKTNTLVVGD-GANDLSMFKHAHIKIAF-NAKEV 188 (217)
T ss_dssp CCSTTHHHHHHHHHHHHHT------CCSTTEEEEEC-SGGGHHHHTTCSEEEEE-SCCHH
T ss_pred CCCCCChHHHHHHHHHHcC------CCHhHEEEEeC-CHHHHHHHHHCCCeEEE-CccHH
Confidence 3467899999999999999 78899999999 8899 777 889999 76654
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.08 E-value=2.1e-07 Score=94.56 Aligned_cols=65 Identities=9% Similarity=-0.019 Sum_probs=53.2
Q ss_pred CCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCC-ch--hhc--cCcEEE---eCCCCc---chhhhcCCHHHHHHHHH
Q 003145 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KV--LLT--QFLIQV---GSSINS---LSKEKKRKVHQLFGIFL 835 (844)
Q Consensus 767 vnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~-nD--Mf~--g~~Iav---gna~~~---~a~~~l~~~~~v~~~l~ 835 (844)
-.|+.+++.+++++| ++++.+++||| +. || |.+ |++++| |++.++ .+.+.+++..++..+|.
T Consensus 158 kp~~~~~~~~~~~lg------i~~~~~~~iGD-~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~ 230 (235)
T 2om6_A 158 KPRKEMFEKVLNSFE------VKPEESLHIGD-TYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKDVIE 230 (235)
T ss_dssp TTCHHHHHHHHHHTT------CCGGGEEEEES-CTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGHHHHHH
T ss_pred CCCHHHHHHHHHHcC------CCccceEEECC-ChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHHHHHHH
Confidence 357899999999999 78999999999 87 99 777 899888 654433 35668999999999988
Q ss_pred HHh
Q 003145 836 RFS 838 (844)
Q Consensus 836 ~~~ 838 (844)
.+.
T Consensus 231 ~~~ 233 (235)
T 2om6_A 231 LIS 233 (235)
T ss_dssp HTC
T ss_pred HHh
Confidence 764
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=98.05 E-value=9.2e-06 Score=85.02 Aligned_cols=67 Identities=7% Similarity=0.119 Sum_probs=49.7
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcc----cCc---
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE----YNL--- 662 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~----l~l--- 662 (844)
+.|+|+||+||||++.. ..+ +.+.++|+.|.+ .|..++++|||+......++.. +++
T Consensus 4 ~~k~v~fDlDGTL~~~~--------------~~~-~~~~~~l~~l~~-~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~~ 67 (264)
T 1yv9_A 4 DYQGYLIDLDGTIYLGK--------------EPI-PAGKRFVERLQE-KDLPFLFVTNNTTKSPETVAQRLANEFDIHVP 67 (264)
T ss_dssp SCCEEEECCBTTTEETT--------------EEC-HHHHHHHHHHHH-TTCCEEEEECCCSSCHHHHHHHHHHHSCCCCC
T ss_pred cCCEEEEeCCCeEEeCC--------------EEC-cCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCC
Confidence 46899999999999862 223 688899999987 5999999999988776665554 332
Q ss_pred --eEEeecceEE
Q 003145 663 --WLAAENGMFL 672 (844)
Q Consensus 663 --~liaenG~~i 672 (844)
.+++.+|+.+
T Consensus 68 ~~~~~~~~~~~~ 79 (264)
T 1yv9_A 68 ASLVYTATLATI 79 (264)
T ss_dssp GGGEEEHHHHHH
T ss_pred hhhEEcHHHHHH
Confidence 3566666543
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=98.04 E-value=4.6e-06 Score=77.92 Aligned_cols=52 Identities=17% Similarity=0.222 Sum_probs=40.6
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhh
Q 003145 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 652 (844)
Q Consensus 592 rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~ 652 (844)
|+|++|+||||++....+ . ....+++.+.++|++|.+ +|..++|+|||+...
T Consensus 2 k~i~~DlDGTL~~~~~~~------~--~~~~~~~~~~~~l~~l~~-~Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 2 KKLIVDLDGTLTQANTSD------Y--RNVLPRLDVIEQLREYHQ-LGFEIVISTARNMRT 53 (126)
T ss_dssp CEEEECSTTTTBCCCCSC------G--GGCCBCHHHHHHHHHHHH-TTCEEEEEECTTTTT
T ss_pred CEEEEecCCCCCCCCCCc------c--ccCCCCHHHHHHHHHHHh-CCCeEEEEeCCChhh
Confidence 789999999999863210 0 012477899999999988 599999999998743
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.99 E-value=5.7e-06 Score=83.18 Aligned_cols=58 Identities=9% Similarity=-0.057 Sum_probs=47.9
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEE----eCCCC---cchhhhcCCHHHHHH
Q 003145 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQV----GSSIN---SLSKEKKRKVHQLFG 832 (844)
Q Consensus 768 nKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iav----gna~~---~~a~~~l~~~~~v~~ 832 (844)
.|+.+++.++++++ ++++.+++||| +.|| |++ |++++| +|+.+ ..|.+.+++..++..
T Consensus 151 p~~~~~~~~~~~~~------i~~~~~i~iGD-~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el~~ 219 (226)
T 1te2_A 151 PHPQVYLDCAAKLG------VDPLTCVALED-SVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTA 219 (226)
T ss_dssp TSTHHHHHHHHHHT------SCGGGEEEEES-SHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCCH
T ss_pred CChHHHHHHHHHcC------CCHHHeEEEeC-CHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHHhH
Confidence 44999999999999 78999999999 8899 777 899998 77654 456677888887654
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=97.99 E-value=1.7e-06 Score=87.11 Aligned_cols=65 Identities=3% Similarity=-0.260 Sum_probs=49.9
Q ss_pred CCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCc--chhhhcCCHHHH--HHHHHHHh
Q 003145 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINS--LSKEKKRKVHQL--FGIFLRFS 838 (844)
Q Consensus 767 vnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~--~a~~~l~~~~~v--~~~l~~~~ 838 (844)
-.|+.+++.++++++ ++++.+++||| +.|| |++ |++++|+|+.++ .|.+.+++.+++ ..+++.+.
T Consensus 145 Kp~~~~~~~~~~~lg------i~~~~~i~iGD-~~nDi~~a~~aG~~~~~~~~~~~~~~a~~v~~~~~el~~~~~~~~~~ 217 (221)
T 2wf7_A 145 KPAPDIFIAAAHAVG------VAPSESIGLED-SQAGIQAIKDSGALPIGVGRPEDLGDDIVIVPDTSHYTLEFLKEVWL 217 (221)
T ss_dssp TTSSHHHHHHHHHTT------CCGGGEEEEES-SHHHHHHHHHHTCEEEEESCHHHHCSSSEEESSGGGCCHHHHHHHHH
T ss_pred CCChHHHHHHHHHcC------CChhHeEEEeC-CHHHHHHHHHCCCEEEEECCHHHhccccchhcCHHhCCHHHHHHHHh
Confidence 345569999999999 78999999999 8899 777 999999998543 456667777764 34444444
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.97 E-value=4.6e-06 Score=84.87 Aligned_cols=55 Identities=9% Similarity=0.076 Sum_probs=42.1
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChh
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRN 651 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~ 651 (844)
+.|+++||+||||+...... .. .....+.+.+.++|++|.+ .|..++|+|+++..
T Consensus 24 ~~k~v~~D~DGTL~~~~~~~----~~--~~~~~~~pg~~e~L~~L~~-~G~~~~ivTn~~~~ 78 (211)
T 2gmw_A 24 SVPAIFLDRDGTINVDHGYV----HE--IDNFEFIDGVIDAMRELKK-MGFALVVVTNQSGI 78 (211)
T ss_dssp CBCEEEECSBTTTBCCCSSC----CS--GGGCCBCTTHHHHHHHHHH-TTCEEEEEEECTHH
T ss_pred cCCEEEEcCCCCeECCCCcc----cC--cccCcCCcCHHHHHHHHHH-CCCeEEEEECcCCc
Confidence 46899999999999763111 00 1234677899999999998 59999999999864
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.97 E-value=2.6e-07 Score=97.91 Aligned_cols=67 Identities=13% Similarity=-0.006 Sum_probs=54.4
Q ss_pred eCCCCHHHHHHHHHHHhcccCcCCCCC-ceEEEEeeCCCch--hhc--cCcEEEeCCCCc---------chhhhcCCHHH
Q 003145 764 AVGVTKGAAIDRILAEIVHSKKMKTAI-DYVLCIGHFLGKV--LLT--QFLIQVGSSINS---------LSKEKKRKVHQ 829 (844)
Q Consensus 764 p~gvnKG~al~~Ll~~l~~~~~~~~~~-d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~---------~a~~~l~~~~~ 829 (844)
..+-.|+.+++.+++++| +++ +.+++||| +.|| |.+ |++++|+++... .|.+.+++..+
T Consensus 201 ~~~Kp~~~~~~~~~~~lg------i~~~~~~i~vGD-~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~e 273 (282)
T 3nuq_A 201 LVCKPHVKAFEKAMKESG------LARYENAYFIDD-SGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILE 273 (282)
T ss_dssp CCCTTSHHHHHHHHHHHT------CCCGGGEEEEES-CHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGG
T ss_pred cCCCcCHHHHHHHHHHcC------CCCcccEEEEcC-CHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHH
Confidence 345689999999999999 777 99999999 8899 666 898899998653 45577888888
Q ss_pred HHHHHHHH
Q 003145 830 LFGIFLRF 837 (844)
Q Consensus 830 v~~~l~~~ 837 (844)
+..+|..|
T Consensus 274 l~~~l~~l 281 (282)
T 3nuq_A 274 LPHVVSDL 281 (282)
T ss_dssp GGGTSGGG
T ss_pred HHHHhhhh
Confidence 87776543
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.96 E-value=6.4e-06 Score=83.13 Aligned_cols=60 Identities=10% Similarity=0.066 Sum_probs=45.6
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCC-ch--hhc--cCcEEE-------eCCCCc---c-hhhhcCCHHHHH
Q 003145 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KV--LLT--QFLIQV-------GSSINS---L-SKEKKRKVHQLF 831 (844)
Q Consensus 768 nKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~-nD--Mf~--g~~Iav-------gna~~~---~-a~~~l~~~~~v~ 831 (844)
.|+.+++.+++++| ++++.+++||| +. || |.+ |+++++ |++.++ . +.+.+++..|+.
T Consensus 158 pk~~~~~~~~~~lg------i~~~~~i~iGD-~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~ 230 (234)
T 3ddh_A 158 KTEKEYLRLLSILQ------IAPSELLMVGN-SFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDLL 230 (234)
T ss_dssp CSHHHHHHHHHHHT------CCGGGEEEEES-CCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGHH
T ss_pred CCHHHHHHHHHHhC------CCcceEEEECC-CcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHHH
Confidence 69999999999999 78999999999 85 99 666 776665 444322 2 256788998887
Q ss_pred HHH
Q 003145 832 GIF 834 (844)
Q Consensus 832 ~~l 834 (844)
.+|
T Consensus 231 ~~l 233 (234)
T 3ddh_A 231 SLL 233 (234)
T ss_dssp HHC
T ss_pred Hhc
Confidence 765
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=2.1e-05 Score=82.41 Aligned_cols=57 Identities=11% Similarity=0.091 Sum_probs=42.9
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCc---chhhhc--CCHHHHHHHHHH
Q 003145 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINS---LSKEKK--RKVHQLFGIFLR 836 (844)
Q Consensus 768 nKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~---~a~~~l--~~~~~v~~~l~~ 836 (844)
+|+.+++.+.+.+ .+++||| +.|| |++ |++|+|||+.+. .|.+.+ ++..++..+|+.
T Consensus 194 ~k~~~~k~~~~~~-----------~~~~vGD-~~nDi~~~~~Ag~~va~~~~~~~~~~~a~~~~~~~~~~~l~~~l~~ 259 (280)
T 3skx_A 194 EKAEKVKEVQQKY-----------VTAMVGD-GVNDAPALAQADVGIAIGAGTDVAVETADIVLVRNDPRDVAAIVEL 259 (280)
T ss_dssp GHHHHHHHHHTTS-----------CEEEEEC-TTTTHHHHHHSSEEEECSCCSSSCCCSSSEECSSCCTHHHHHHHHH
T ss_pred HHHHHHHHHHhcC-----------CEEEEeC-CchhHHHHHhCCceEEecCCcHHHHhhCCEEEeCCCHHHHHHHHHH
Confidence 3888877765432 5799999 9999 777 899999998654 345555 888888888763
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.89 E-value=9.8e-07 Score=89.66 Aligned_cols=65 Identities=12% Similarity=0.064 Sum_probs=50.3
Q ss_pred CCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCC-ch--hhc--cCcEEEeC---C-C--CcchhhhcCCHHHHHHH
Q 003145 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KV--LLT--QFLIQVGS---S-I--NSLSKEKKRKVHQLFGI 833 (844)
Q Consensus 765 ~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~-nD--Mf~--g~~Iavgn---a-~--~~~a~~~l~~~~~v~~~ 833 (844)
.+-.|+.+++.++++++ ++++.+++||| +. || |.+ |+++++-+ . . ...+.+.+++..++..+
T Consensus 153 ~~kp~~~~~~~~~~~~~------~~~~~~~~vGD-~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~ 225 (230)
T 3vay_A 153 IGKPDPAPFLEALRRAK------VDASAAVHVGD-HPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEV 225 (230)
T ss_dssp CCTTSHHHHHHHHHHHT------CCGGGEEEEES-CTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHH
T ss_pred CCCcCHHHHHHHHHHhC------CCchheEEEeC-ChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHH
Confidence 44567999999999999 78999999999 86 99 665 77666522 1 1 23567789999999998
Q ss_pred HHH
Q 003145 834 FLR 836 (844)
Q Consensus 834 l~~ 836 (844)
|.+
T Consensus 226 l~~ 228 (230)
T 3vay_A 226 LAR 228 (230)
T ss_dssp HHT
T ss_pred HHh
Confidence 865
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.85 E-value=1.8e-06 Score=87.88 Aligned_cols=206 Identities=10% Similarity=0.034 Sum_probs=102.8
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHh-hcCCCCcEEEEcCCChhh-HHHhhcccCce----
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL-CHDPKTTIVVLSGSDRNV-LDKNFQEYNLW---- 663 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L-~~d~g~~V~I~SGR~~~~-l~~~~~~l~l~---- 663 (844)
..|+|+||+||||++.. ....+...++++++ -......+..++||+... +..++..+++.
T Consensus 3 ~~k~iifDlDGTL~d~~--------------~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 68 (234)
T 2hcf_A 3 SRTLVLFDIDGTLLKVE--------------SMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERAEI 68 (234)
T ss_dssp CCEEEEECCBTTTEEEC--------------THHHHHHHHHHHHHHSCCCCC---CCTTCCHHHHHHHHHHTTTCCHHHH
T ss_pred cceEEEEcCCCCcccCc--------------cchHHHHHHHHHHHhCCCCccchhhhcCCChHHHHHHHHHHcCCCcccc
Confidence 36899999999999863 22446677777773 322223577889999877 66666654321
Q ss_pred ---EEeecceEEEecCCeee-ecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHHHHHH
Q 003145 664 ---LAAENGMFLRCTTGKWM-TTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQ 739 (844)
Q Consensus 664 ---liaenG~~i~~~~~~w~-~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el~~ 739 (844)
+...+|.+...-...+. ... ...+.+.++++...++ +| ..+.+- .+...+. ....++
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~l~~~-~g-------~~~~i~-t~~~~~~----~~~~l~ 129 (234)
T 2hcf_A 69 ADKFDKAKETYIALFRERARREDI------TLLEGVRELLDALSSR-SD-------VLLGLL-TGNFEAS----GRHKLK 129 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHCCGGGE------EECTTHHHHHHHHHTC-TT-------EEEEEE-CSSCHHH----HHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHhccCCC------CcCCCHHHHHHHHHhC-CC-------ceEEEE-cCCcHHH----HHHHHH
Confidence 12222322211000000 000 0012334445444321 12 111111 1112111 122222
Q ss_pred HHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCc-EEEeC
Q 003145 740 HLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFL-IQVGS 814 (844)
Q Consensus 740 ~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~-Iavgn 814 (844)
.+ .+..-... ++.+.. +.+.+-.+..+++.++++++. .++++.+++||| +.|| |.+ |+. |.|.+
T Consensus 130 ~~--~l~~~f~~-~~~~~~---~~~~~k~~~~~~~~~~~~lg~----~~~~~~~i~iGD-~~~Di~~a~~aG~~~i~v~~ 198 (234)
T 2hcf_A 130 LP--GIDHYFPF-GAFADD---ALDRNELPHIALERARRMTGA----NYSPSQIVIIGD-TEHDIRCARELDARSIAVAT 198 (234)
T ss_dssp TT--TCSTTCSC-EECTTT---CSSGGGHHHHHHHHHHHHHCC----CCCGGGEEEEES-SHHHHHHHHTTTCEEEEECC
T ss_pred HC--CchhhcCc-ceecCC---CcCccchHHHHHHHHHHHhCC----CCCcccEEEECC-CHHHHHHHHHCCCcEEEEcC
Confidence 22 11111111 232321 112222456778889998871 025899999999 8899 666 543 44444
Q ss_pred C--CC-cc----hhhhcCCHHHHHHHHHHHhh
Q 003145 815 S--IN-SL----SKEKKRKVHQLFGIFLRFSY 839 (844)
Q Consensus 815 a--~~-~~----a~~~l~~~~~v~~~l~~~~~ 839 (844)
+ .+ .+ |.+.+++..++..+|..+..
T Consensus 199 ~~~~~~~~~~~~a~~v~~~~~el~~~l~~~~~ 230 (234)
T 2hcf_A 199 GNFTMEELARHKPGTLFKNFAETDEVLASILT 230 (234)
T ss_dssp SSSCHHHHHTTCCSEEESCSCCHHHHHHHHHC
T ss_pred CCCCHHHHHhCCCCEEeCCHHhHHHHHHHHhc
Confidence 3 22 12 56778999999999988753
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.84 E-value=9.5e-05 Score=76.30 Aligned_cols=64 Identities=8% Similarity=-0.049 Sum_probs=48.2
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCC-ch--hhc--cCcEE-EeCCC-----------Ccchhh-hcCCHHH
Q 003145 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KV--LLT--QFLIQ-VGSSI-----------NSLSKE-KKRKVHQ 829 (844)
Q Consensus 768 nKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~-nD--Mf~--g~~Ia-vgna~-----------~~~a~~-~l~~~~~ 829 (844)
.++.++..++++++ ++++.+++||| +. || |.+ |++++ +.... ...+.+ .+++..+
T Consensus 163 p~~~~~~~~~~~l~------~~~~~~i~iGD-~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~e 235 (251)
T 2pke_A 163 KDPQTYARVLSEFD------LPAERFVMIGN-SLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSG 235 (251)
T ss_dssp CSHHHHHHHHHHHT------CCGGGEEEEES-CCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECSSGGG
T ss_pred CCHHHHHHHHHHhC------cCchhEEEECC-CchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeCCHHH
Confidence 46899999999999 78999999999 87 99 666 66554 32111 123555 7999999
Q ss_pred HHHHHHHHh
Q 003145 830 LFGIFLRFS 838 (844)
Q Consensus 830 v~~~l~~~~ 838 (844)
+..+|..+.
T Consensus 236 l~~~l~~~~ 244 (251)
T 2pke_A 236 WPAAVRALD 244 (251)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhC
Confidence 999887765
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.80 E-value=0.0004 Score=76.67 Aligned_cols=148 Identities=12% Similarity=0.022 Sum_probs=85.2
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEE
Q 003145 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 443 (844)
Q Consensus 364 ~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~ 443 (844)
.+++..|++...+.-..+++|++.+ +.-. ++.++.+++. + .++.+.+.. ...+. ++.+
T Consensus 182 ~ilv~gGs~g~~~~~~~~~~al~~l----~~~~-~~~vi~~~G~--~---~~~~~~~~~----~~~~~--------~~~v 239 (365)
T 3s2u_A 182 NLLVLGGSLGAEPLNKLLPEALAQV----PLEI-RPAIRHQAGR--Q---HAEITAERY----RTVAV--------EADV 239 (365)
T ss_dssp EEEECCTTTTCSHHHHHHHHHHHTS----CTTT-CCEEEEECCT--T---THHHHHHHH----HHTTC--------CCEE
T ss_pred EEEEECCcCCccccchhhHHHHHhc----cccc-ceEEEEecCc--c---cccccccee----ccccc--------cccc
Confidence 3455567877666666666666554 2211 2334444321 1 223333332 22221 1222
Q ss_pred eCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCch--------hhc-c-CCeEEECCC-
Q 003145 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA--------QSL-G-AGAILVNPW- 512 (844)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~--------~~l-g-~~g~lvnP~- 512 (844)
.+++ +++..+|+.||++|..| | +.++.|++++| .|.|+..+.++. +.+ . ..|++++..
T Consensus 240 -~~f~--~dm~~~l~~aDlvI~ra---G-~~Tv~E~~a~G----~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~ 308 (365)
T 3s2u_A 240 -APFI--SDMAAAYAWADLVICRA---G-ALTVSELTAAG----LPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKS 308 (365)
T ss_dssp -ESCC--SCHHHHHHHCSEEEECC---C-HHHHHHHHHHT----CCEEECC-----CCHHHHHHHHHHTTTSEEECCTTT
T ss_pred -ccch--hhhhhhhccceEEEecC---C-cchHHHHHHhC----CCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCC
Confidence 3443 46889999999998644 5 67888999996 677776655432 223 1 247888654
Q ss_pred -CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Q 003145 513 -NITEVANAIARALNMSPEEREKRHWHNFTHVTT 545 (844)
Q Consensus 513 -d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 545 (844)
+.+.++++|.++|++++ .+++|.+++++....
T Consensus 309 ~~~~~L~~~i~~ll~d~~-~~~~m~~~a~~~~~~ 341 (365)
T 3s2u_A 309 TGAAELAAQLSEVLMHPE-TLRSMADQARSLAKP 341 (365)
T ss_dssp CCHHHHHHHHHHHHHCTH-HHHHHHHHHHHTCCT
T ss_pred CCHHHHHHHHHHHHCCHH-HHHHHHHHHHhcCCc
Confidence 58899999999999874 555555655554433
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00012 Score=82.13 Aligned_cols=104 Identities=13% Similarity=-0.028 Sum_probs=72.7
Q ss_pred EEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCC----chhhc--cCCeEEECCC--
Q 003145 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW-- 512 (844)
Q Consensus 441 v~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G----~~~~l--g~~g~lvnP~-- 512 (844)
|.+ .+.+++. .+|+.||+||..| |. .+.+|||+|| .|+|++...| .++.+ ...|+++++.
T Consensus 285 v~~-~~~~~~~---~~l~~ad~~v~~~---G~-~t~~Ea~~~G----~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~ 352 (430)
T 2iyf_A 285 VEV-HDWVPQL---AILRQADLFVTHA---GA-GGSQEGLATA----TPMIAVPQAVDQFGNADMLQGLGVARKLATEEA 352 (430)
T ss_dssp EEE-ESSCCHH---HHHTTCSEEEECC---CH-HHHHHHHHTT----CCEEECCCSHHHHHHHHHHHHTTSEEECCCC-C
T ss_pred eEE-EecCCHH---HHhhccCEEEECC---Cc-cHHHHHHHhC----CCEEECCCccchHHHHHHHHHcCCEEEcCCCCC
Confidence 554 6788765 6899999998865 33 6899999996 7888886654 23333 3468899877
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 003145 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVS 557 (844)
Q Consensus 513 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~ 557 (844)
|.++++++|.++|+++ +.++++.+...+....+++...++.+.+
T Consensus 353 ~~~~l~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 396 (430)
T 2iyf_A 353 TADLLRETALALVDDP-EVARRLRRIQAEMAQEGGTRRAADLIEA 396 (430)
T ss_dssp CHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 8899999999999854 3444444444555556666665555443
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=3.1e-05 Score=79.33 Aligned_cols=65 Identities=6% Similarity=-0.084 Sum_probs=47.1
Q ss_pred CCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEE---EeCCCC---cch-hhhcCCHHHHHHHHH
Q 003145 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQ---VGSSIN---SLS-KEKKRKVHQLFGIFL 835 (844)
Q Consensus 767 vnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Ia---vgna~~---~~a-~~~l~~~~~v~~~l~ 835 (844)
-.|+.+++.++++++ ++++.+++||| +.+| |.+ |+.++ .|+..+ ..+ .+.++++.++..+|.
T Consensus 161 Kp~~~~~~~~~~~~~------~~~~~~~~iGD-~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~el~~~l~ 233 (240)
T 2no4_A 161 KPDPRIYQFACDRLG------VNPNEVCFVSS-NAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVNSLSELWPLLA 233 (240)
T ss_dssp TTSHHHHHHHHHHHT------CCGGGEEEEES-CHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEESSGGGHHHHHC
T ss_pred CCCHHHHHHHHHHcC------CCcccEEEEeC-CHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceeeCCHHHHHHHHH
Confidence 357788899999998 78899999999 8899 555 54433 344422 234 677899999998876
Q ss_pred HHh
Q 003145 836 RFS 838 (844)
Q Consensus 836 ~~~ 838 (844)
.+.
T Consensus 234 ~~~ 236 (240)
T 2no4_A 234 KNV 236 (240)
T ss_dssp C--
T ss_pred Hhh
Confidence 554
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.62 E-value=2.5e-05 Score=79.65 Aligned_cols=55 Identities=18% Similarity=0.279 Sum_probs=42.1
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChh
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRN 651 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~ 651 (844)
..+++++|+||||+....... ......+.+.+.++|++|.+ .|..++|+|+++..
T Consensus 30 ~~k~i~~D~DGtl~~~~~y~~------~~~~~~~~~g~~e~L~~L~~-~G~~~~i~Tn~~~~ 84 (218)
T 2o2x_A 30 HLPALFLDRDGTINVDTDYPS------DPAEIVLRPQMLPAIATANR-AGIPVVVVTNQSGI 84 (218)
T ss_dssp SCCCEEECSBTTTBCCCSCTT------CGGGCCBCGGGHHHHHHHHH-HTCCEEEEEECHHH
T ss_pred cCCEEEEeCCCCcCCCCcccC------CcccCeECcCHHHHHHHHHH-CCCEEEEEcCcCCC
Confidence 468999999999997632110 01235678899999999987 59999999999764
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.58 E-value=7.5e-05 Score=75.81 Aligned_cols=67 Identities=7% Similarity=-0.031 Sum_probs=49.7
Q ss_pred CCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEE----eCCCC---cchhhhcCCHHHHHHH
Q 003145 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQV----GSSIN---SLSKEKKRKVHQLFGI 833 (844)
Q Consensus 765 ~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iav----gna~~---~~a~~~l~~~~~v~~~ 833 (844)
.+-.|..+++.++++++ ++++.+++||| +.|| |.+ |+++++ ++..+ ..+.+.+++..++..+
T Consensus 149 ~~Kp~~~~~~~~~~~~~------~~~~~~~~iGD-~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 221 (232)
T 1zrn_A 149 VYKPDNRVYELAEQALG------LDRSAILFVAS-NAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVEL 221 (232)
T ss_dssp CCTTSHHHHHHHHHHHT------SCGGGEEEEES-CHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTT
T ss_pred CCCCCHHHHHHHHHHcC------CCcccEEEEeC-CHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHHHHHH
Confidence 45567889999999998 78899999999 8899 565 888887 33322 3466789999999887
Q ss_pred HHHHh
Q 003145 834 FLRFS 838 (844)
Q Consensus 834 l~~~~ 838 (844)
|..+.
T Consensus 222 l~~~~ 226 (232)
T 1zrn_A 222 FETAA 226 (232)
T ss_dssp C----
T ss_pred HHhhc
Confidence 76654
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.57 E-value=0.0001 Score=73.08 Aligned_cols=72 Identities=13% Similarity=0.124 Sum_probs=50.6
Q ss_pred hcCCeEEEEecCCccCCCCCCCCCCCccc-----------cccccCCChhHHHHHHHhhcCCCCcEEEEcCCC-hhhHHH
Q 003145 588 RSNNRLLILGFNATLTEPVDTPGRRGDQI-----------REMELKLHPDLKQPLNALCHDPKTTIVVLSGSD-RNVLDK 655 (844)
Q Consensus 588 ~sk~rLi~lD~DGTL~~~~~~p~~~~~~~-----------~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~-~~~l~~ 655 (844)
....|+|+||+||||.+..-.. ..+... ......+.+.+.++|++|.+ .|..++|+||++ ...+..
T Consensus 24 ~~~~k~vifDlDGTL~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~-~G~~v~ivT~~~~~~~~~~ 101 (187)
T 2wm8_A 24 ARLPKLAVFDLDYTLWPFWVDT-HVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQS-LGVPGAAASRTSEIEGANQ 101 (187)
T ss_dssp HTSCSEEEECSBTTTBSSCTTT-SSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHHHH-HTCCEEEEECCSCHHHHHH
T ss_pred HhccCEEEEcCCCCcchHHHhh-ccCcchhhhcccchhhccCcccCcchhHHHHHHHHHH-CCceEEEEeCCCChHHHHH
Confidence 3457899999999998542100 000000 01235678899999999988 599999999999 788888
Q ss_pred hhcccC
Q 003145 656 NFQEYN 661 (844)
Q Consensus 656 ~~~~l~ 661 (844)
.++.++
T Consensus 102 ~l~~~g 107 (187)
T 2wm8_A 102 LLELFD 107 (187)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 887654
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00019 Score=69.74 Aligned_cols=124 Identities=15% Similarity=0.105 Sum_probs=83.1
Q ss_pred CCcEEEEEeccc---ccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCc
Q 003145 362 GRKVMLGVDRLD---MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTA 438 (844)
Q Consensus 362 ~~~vil~VdRld---~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~ 438 (844)
...++++.|++. +.|++..+++|+..+ + ..++.++.+.. ++ .+ .
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~----~-----~~~~~~~g~~~---~~-------------~~----~---- 67 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQI----P-----QKVLWRFDGNK---PD-------------TL----G---- 67 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTS----S-----SEEEEECCSSC---CT-------------TC----C----
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhC----C-----CeEEEEECCcC---cc-------------cC----C----
Confidence 356888899985 677788888887532 2 22444443211 00 01 0
Q ss_pred ccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCC----chhhc--cCCeEEECCC
Q 003145 439 VPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW 512 (844)
Q Consensus 439 ~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G----~~~~l--g~~g~lvnP~ 512 (844)
..|. +.+.+++.++.++ ..||++|.. |-+.++.|+|+|| .|+|+....+ .++.+ ...|+.+++.
T Consensus 68 ~~v~-~~~~~~~~~~l~~-~~ad~~I~~----~G~~t~~Ea~~~G----~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~ 137 (170)
T 2o6l_A 68 LNTR-LYKWIPQNDLLGH-PKTRAFITH----GGANGIYEAIYHG----IPMVGIPLFADQPDNIAHMKARGAAVRVDFN 137 (170)
T ss_dssp TTEE-EESSCCHHHHHTS-TTEEEEEEC----CCHHHHHHHHHHT----CCEEECCCSTTHHHHHHHHHTTTSEEECCTT
T ss_pred CcEE-EecCCCHHHHhcC-CCcCEEEEc----CCccHHHHHHHcC----CCEEeccchhhHHHHHHHHHHcCCeEEeccc
Confidence 1355 4688888776653 999999974 3358999999996 7888876642 23334 2468888876
Q ss_pred --CHHHHHHHHHHHhcCC
Q 003145 513 --NITEVANAIARALNMS 528 (844)
Q Consensus 513 --d~~~~A~ai~~aL~m~ 528 (844)
+.++++++|.++|+.+
T Consensus 138 ~~~~~~l~~~i~~ll~~~ 155 (170)
T 2o6l_A 138 TMSSTDLLNALKRVINDP 155 (170)
T ss_dssp TCCHHHHHHHHHHHHHCH
T ss_pred cCCHHHHHHHHHHHHcCH
Confidence 8899999999999754
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00072 Score=68.62 Aligned_cols=40 Identities=5% Similarity=0.047 Sum_probs=29.2
Q ss_pred CCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
.+.+.+.+.|+.|.+ .|..++|+||.+...++.++..+++
T Consensus 92 ~~~~g~~~~l~~l~~-~g~~~~ivS~~~~~~~~~~~~~~g~ 131 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLA-AGDLCALVTATNSFVTAPIARAFGV 131 (232)
T ss_dssp GCCHHHHHHHHHHHH-TTCEEEEEESSCHHHHHHHHHHTTC
T ss_pred hcCHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 346777788888876 4788888888887777777776554
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00017 Score=85.73 Aligned_cols=72 Identities=15% Similarity=0.195 Sum_probs=55.8
Q ss_pred HHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhc
Q 003145 579 EADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (844)
Q Consensus 579 ~~~~~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 658 (844)
.....+.+.....+.+++.+||+++.... ...++.+++.++|++|.+ .|++++++||++........+
T Consensus 425 ~~~~~~~~~~~g~~~l~va~~~~~~G~i~-----------~~D~l~~~~~~~i~~L~~-~Gi~v~~~TGd~~~~a~~ia~ 492 (645)
T 3j08_A 425 VELALEKLEREAKTAVIVARNGRVEGIIA-----------VSDTLKESAKPAVQELKR-MGIKVGMITGDNWRSAEAISR 492 (645)
T ss_dssp HHHHHHHHHTTTCCCEEEEETTEEEEEEE-----------EECCCTTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEEECCEEEEEEE-----------ecCCchhHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHH
Confidence 33445566667788899999999875321 234578899999999998 599999999999999888877
Q ss_pred ccCc
Q 003145 659 EYNL 662 (844)
Q Consensus 659 ~l~l 662 (844)
++++
T Consensus 493 ~lgi 496 (645)
T 3j08_A 493 ELNL 496 (645)
T ss_dssp HHTC
T ss_pred HcCC
Confidence 7654
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00072 Score=73.53 Aligned_cols=64 Identities=8% Similarity=0.075 Sum_probs=50.0
Q ss_pred CCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcc---hhh--hcCCHHHHHHHHHHH
Q 003145 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSL---SKE--KKRKVHQLFGIFLRF 837 (844)
Q Consensus 767 vnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~---a~~--~l~~~~~v~~~l~~~ 837 (844)
-.|+.+++.++++++ ++++.+++||| +.|| |++ |++|+| |+.+.+ |++ ..++..++..+|+..
T Consensus 244 kpk~~~~~~~~~~lg------i~~~~~v~vGD-s~nDi~~a~~aG~~va~-~~~~~~~~~a~~v~~~~~l~~v~~~L~~~ 315 (335)
T 3n28_A 244 QTKADILLTLAQQYD------VEIHNTVAVGD-GANDLVMMAAAGLGVAY-HAKPKVEAKAQTAVRFAGLGGVVCILSAA 315 (335)
T ss_dssp HHHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHHHHHSSEEEEE-SCCHHHHTTSSEEESSSCTHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHcC------CChhhEEEEeC-CHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEEecCCHHHHHHHHHhH
Confidence 479999999999999 78899999999 9999 777 899999 776543 232 355666777776655
Q ss_pred h
Q 003145 838 S 838 (844)
Q Consensus 838 ~ 838 (844)
.
T Consensus 316 l 316 (335)
T 3n28_A 316 L 316 (335)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.0021 Score=70.72 Aligned_cols=136 Identities=10% Similarity=0.048 Sum_probs=85.7
Q ss_pred CcEEEEEeccccc-------CCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCC
Q 003145 363 RKVMLGVDRLDMI-------KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGT 435 (844)
Q Consensus 363 ~~vil~VdRld~~-------KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~ 435 (844)
..+++++|++... +.+..+++|++.+ + +.++.++. .++.. ++.. +..
T Consensus 211 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~----~~~~~~~g-----~~~~~----~l~~----~~~---- 264 (384)
T 2p6p_A 211 QRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----D----VELIVAAP-----DTVAE----ALRA----EVP---- 264 (384)
T ss_dssp CEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----T----CEEEEECC-----HHHHH----HHHH----HCT----
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhcC-----C----cEEEEEeC-----CCCHH----hhCC----CCC----
Confidence 4588899999875 5677777777542 2 33544432 12222 2221 111
Q ss_pred CCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCC----chhhc--cCCeEEE
Q 003145 436 LTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILV 509 (844)
Q Consensus 436 ~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G----~~~~l--g~~g~lv 509 (844)
.|. + +.++.. .+|..||+||..+ | ..+..|||+|| .|+|+....+ .++.+ ...|+.+
T Consensus 265 ----~v~-~-~~~~~~---~~l~~~d~~v~~~---G-~~t~~Ea~~~G----~P~v~~p~~~dq~~~a~~~~~~g~g~~~ 327 (384)
T 2p6p_A 265 ----QAR-V-GWTPLD---VVAPTCDLLVHHA---G-GVSTLTGLSAG----VPQLLIPKGSVLEAPARRVADYGAAIAL 327 (384)
T ss_dssp ----TSE-E-ECCCHH---HHGGGCSEEEECS---C-TTHHHHHHHTT----CCEEECCCSHHHHHHHHHHHHHTSEEEC
T ss_pred ----ceE-E-cCCCHH---HHHhhCCEEEeCC---c-HHHHHHHHHhC----CCEEEccCcccchHHHHHHHHCCCeEec
Confidence 244 4 677754 4679999999863 3 45789999996 6888876643 33334 2358888
Q ss_pred CCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 003145 510 NPW--NITEVANAIARALNMSPEEREKRHWHNFTHV 543 (844)
Q Consensus 510 nP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v 543 (844)
++. +.++++++|.++|+++ +.++++.+..+.+
T Consensus 328 ~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~ 361 (384)
T 2p6p_A 328 LPGEDSTEAIADSCQELQAKD--TYARRAQDLSREI 361 (384)
T ss_dssp CTTCCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHH
Confidence 875 7899999999999864 3334444444444
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00031 Score=74.78 Aligned_cols=71 Identities=15% Similarity=0.206 Sum_probs=54.9
Q ss_pred HHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcc
Q 003145 580 ADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (844)
Q Consensus 580 ~~~~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 659 (844)
....+.|.....+++++|+|+++..... ....+.|.+.++|+.|.+ .|..++|+||++...++..+..
T Consensus 132 ~~~~~~~~~~g~~~i~~~~d~~~~~~~~-----------~~~~~~~g~~~~l~~L~~-~g~~~~i~T~~~~~~~~~~l~~ 199 (287)
T 3a1c_A 132 ELALEKLEREAKTAVIVARNGRVEGIIA-----------VSDTLKESAKPAVQELKR-MGIKVGMITGDNWRSAEAISRE 199 (287)
T ss_dssp HHHHHHHHHTTCEEEEEEETTEEEEEEE-----------EECCBCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCeEEEEEECCEEEEEEE-----------eccccchhHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHH
Confidence 3455667777789999999999875310 134577899999999988 5999999999999888887776
Q ss_pred cCc
Q 003145 660 YNL 662 (844)
Q Consensus 660 l~l 662 (844)
+++
T Consensus 200 ~gl 202 (287)
T 3a1c_A 200 LNL 202 (287)
T ss_dssp HTC
T ss_pred hCC
Confidence 543
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.37 E-value=1.2e-05 Score=84.82 Aligned_cols=60 Identities=5% Similarity=-0.149 Sum_probs=44.6
Q ss_pred eCCCCHHHHHHHHHHHhcccCcCCC-------CCceEEEEeeCCCch--hhc--cCcEEE---eCCCC----cchhhhcC
Q 003145 764 AVGVTKGAAIDRILAEIVHSKKMKT-------AIDYVLCIGHFLGKV--LLT--QFLIQV---GSSIN----SLSKEKKR 825 (844)
Q Consensus 764 p~gvnKG~al~~Ll~~l~~~~~~~~-------~~d~vlaiGD~~~nD--Mf~--g~~Iav---gna~~----~~a~~~l~ 825 (844)
+.+..|+.++..++++++ + +++.+++||| +.|| |.+ |+++++ |++.+ ..|.+.++
T Consensus 167 ~~~kp~~~~~~~~~~~lg------i~~~~~~~~~~~~i~~GD-s~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~ 239 (275)
T 2qlt_A 167 KQGKPHPEPYLKGRNGLG------FPINEQDPSKSKVVVFED-APAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVK 239 (275)
T ss_dssp SSCTTSSHHHHHHHHHTT------CCCCSSCGGGSCEEEEES-SHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEES
T ss_pred CCCCCChHHHHHHHHHcC------CCccccCCCcceEEEEeC-CHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEEC
Confidence 556789999999999998 7 7899999999 8899 777 766665 44422 23556666
Q ss_pred CHHHH
Q 003145 826 KVHQL 830 (844)
Q Consensus 826 ~~~~v 830 (844)
+..++
T Consensus 240 ~~~el 244 (275)
T 2qlt_A 240 NHESI 244 (275)
T ss_dssp SGGGE
T ss_pred ChHHc
Confidence 66553
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.27 E-value=9.6e-05 Score=77.45 Aligned_cols=66 Identities=8% Similarity=0.104 Sum_probs=50.0
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcc---cCc-----e
Q 003145 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE---YNL-----W 663 (844)
Q Consensus 592 rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~---l~l-----~ 663 (844)
|+|+||+||||++.. ..+ +.+.++|++|.+ .|..|+++|||+......+... +++ .
T Consensus 2 k~i~~D~DGtL~~~~--------------~~~-~~~~~~l~~l~~-~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~ 65 (263)
T 1zjj_A 2 VAIIFDMDGVLYRGN--------------RAI-PGVRELIEFLKE-RGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSI 65 (263)
T ss_dssp EEEEEECBTTTEETT--------------EEC-TTHHHHHHHHHH-HTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGG
T ss_pred eEEEEeCcCceEeCC--------------EeC-ccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhh
Confidence 789999999999752 223 679999999987 5999999999997665555444 333 4
Q ss_pred EEeecceEEE
Q 003145 664 LAAENGMFLR 673 (844)
Q Consensus 664 liaenG~~i~ 673 (844)
+++.||+...
T Consensus 66 i~~~~~~~~~ 75 (263)
T 1zjj_A 66 IITSGLATRL 75 (263)
T ss_dssp EEEHHHHHHH
T ss_pred EEecHHHHHH
Confidence 7778887543
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=97.26 E-value=9.9e-05 Score=77.67 Aligned_cols=73 Identities=16% Similarity=0.166 Sum_probs=47.9
Q ss_pred cCCeEEEEecCCccCCCCC-----------CCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCC---hhhHH
Q 003145 589 SNNRLLILGFNATLTEPVD-----------TPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD---RNVLD 654 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~-----------~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~---~~~l~ 654 (844)
.+.++|+||+||||++... .+.....-.......+.|.+.++|+.|.+ .|..++|+|||+ ...+.
T Consensus 57 ~~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~-~Gi~i~iaTnr~~~~~~~~~ 135 (258)
T 2i33_A 57 EKKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYTES-KGVDIYYISNRKTNQLDATI 135 (258)
T ss_dssp SSEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHHHH-TTCEEEEEEEEEGGGHHHHH
T ss_pred CCCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHHHH-CCCEEEEEcCCchhHHHHHH
Confidence 4578999999999998620 00000000000014577899999999998 599999999999 44555
Q ss_pred HhhcccCc
Q 003145 655 KNFQEYNL 662 (844)
Q Consensus 655 ~~~~~l~l 662 (844)
..+..+++
T Consensus 136 ~~L~~~Gl 143 (258)
T 2i33_A 136 KNLERVGA 143 (258)
T ss_dssp HHHHHHTC
T ss_pred HHHHHcCC
Confidence 55655443
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00089 Score=80.65 Aligned_cols=72 Identities=15% Similarity=0.195 Sum_probs=56.5
Q ss_pred HHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhc
Q 003145 579 EADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (844)
Q Consensus 579 ~~~~~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 658 (844)
.....+.+.....+.+++.+||+++.... ...++.+++.++|++|.+ .|+.++++||+.........+
T Consensus 503 ~~~~~~~~~~~g~~~~~va~~~~~~G~i~-----------i~D~~~~~~~~~i~~l~~-~Gi~v~~~TGd~~~~a~~ia~ 570 (723)
T 3j09_A 503 VELALEKLEREAKTAVIVARNGRVEGIIA-----------VSDTLKESAKPAVQELKR-MGIKVGMITGDNWRSAEAISR 570 (723)
T ss_dssp HHHHHHHHHTTTCEEEEEEETTEEEEEEE-----------EECCSCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEEECCEEEEEEe-----------ecCCcchhHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHH
Confidence 34455667777889999999999875321 234578899999999998 599999999999998888777
Q ss_pred ccCc
Q 003145 659 EYNL 662 (844)
Q Consensus 659 ~l~l 662 (844)
++++
T Consensus 571 ~lgi 574 (723)
T 3j09_A 571 ELNL 574 (723)
T ss_dssp HHTC
T ss_pred HcCC
Confidence 7654
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00027 Score=71.09 Aligned_cols=64 Identities=16% Similarity=0.068 Sum_probs=49.0
Q ss_pred eCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cC---cEEEeCCCC-c----chhhhcCCHHHHH
Q 003145 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QF---LIQVGSSIN-S----LSKEKKRKVHQLF 831 (844)
Q Consensus 764 p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~---~Iavgna~~-~----~a~~~l~~~~~v~ 831 (844)
..+-.|..++..+++++| ++++++++||| +.+| |.+ |+ +|.+|++.. + .+.+.+++..++.
T Consensus 134 ~~~Kp~p~~~~~~~~~lg------~~p~~~~~vgD-s~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el~ 206 (210)
T 2ah5_A 134 PEAPHKADVIHQALQTHQ------LAPEQAIIIGD-TKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVL 206 (210)
T ss_dssp SSCCSHHHHHHHHHHHTT------CCGGGEEEEES-SHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHH
T ss_pred CCCCCChHHHHHHHHHcC------CCcccEEEECC-CHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHHH
Confidence 556789999999999999 78999999999 8899 444 55 555666532 2 3566788888887
Q ss_pred HHH
Q 003145 832 GIF 834 (844)
Q Consensus 832 ~~l 834 (844)
.+|
T Consensus 207 ~~l 209 (210)
T 2ah5_A 207 AYF 209 (210)
T ss_dssp HHT
T ss_pred HHh
Confidence 654
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00094 Score=72.31 Aligned_cols=42 Identities=14% Similarity=0.120 Sum_probs=35.0
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCC
Q 003145 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSIN 817 (844)
Q Consensus 768 nKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~ 817 (844)
.|..++..++++++ ++++.+++||| +.+| |.+ |+++++ ++.+
T Consensus 246 pkp~~~~~~~~~lg------v~~~~~i~VGD-s~~Di~aa~~AG~~va~-~~~~ 291 (317)
T 4eze_A 246 NKKQTLVDLAARLN------IATENIIACGD-GANDLPMLEHAGTGIAW-KAKP 291 (317)
T ss_dssp HHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHHHHHSSEEEEE-SCCH
T ss_pred CCHHHHHHHHHHcC------CCcceEEEEeC-CHHHHHHHHHCCCeEEe-CCCH
Confidence 57788889999998 67899999999 8999 666 889999 4544
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00033 Score=84.31 Aligned_cols=71 Identities=8% Similarity=0.173 Sum_probs=56.4
Q ss_pred HHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcc
Q 003145 580 ADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (844)
Q Consensus 580 ~~~~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 659 (844)
....+.+.....+.+++.+||+++..-. ...++.++++++|++|.+ .|+.++++|||+........++
T Consensus 523 ~~~~~~~~~~G~~vl~va~d~~~~G~i~-----------i~D~i~~~~~~aI~~L~~-~Gi~v~mlTGd~~~~a~~ia~~ 590 (736)
T 3rfu_A 523 FEKADELRGKGASVMFMAVDGKTVALLV-----------VEDPIKSSTPETILELQQ-SGIEIVMLTGDSKRTAEAVAGT 590 (736)
T ss_dssp HHHHHHHHHTTCEEEEEEETTEEEEEEE-----------EECCBCSSHHHHHHHHHH-HTCEEEEECSSCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEEECCEEEEEEE-----------eeccchhhHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHH
Confidence 3345567777889999999999875321 233477899999999998 5999999999999999888887
Q ss_pred cCc
Q 003145 660 YNL 662 (844)
Q Consensus 660 l~l 662 (844)
+++
T Consensus 591 lgi 593 (736)
T 3rfu_A 591 LGI 593 (736)
T ss_dssp HTC
T ss_pred cCC
Confidence 654
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0011 Score=66.96 Aligned_cols=58 Identities=17% Similarity=0.184 Sum_probs=40.5
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCC-----cchhhhcCCHHHHHHHH
Q 003145 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSIN-----SLSKEKKRKVHQLFGIF 834 (844)
Q Consensus 768 nKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~-----~~a~~~l~~~~~v~~~l 834 (844)
.|..++++++++++ . +.+++||| +.+| +.+ |++|.+|+... ..+.+.+++..++..+|
T Consensus 157 ~Kp~~~~~~~~~~~------~--~~~~~vGD-s~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~l 223 (225)
T 1nnl_A 157 GKGKVIKLLKEKFH------F--KKIIMIGD-GATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGEL 223 (225)
T ss_dssp HHHHHHHHHHHHHC------C--SCEEEEES-SHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGGCC--
T ss_pred chHHHHHHHHHHcC------C--CcEEEEeC-cHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecCHHHHHHHH
Confidence 58888999999887 3 78999999 8899 444 66777776432 12445677777776554
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00064 Score=76.35 Aligned_cols=45 Identities=13% Similarity=0.177 Sum_probs=37.9
Q ss_pred CCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcc
Q 003145 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSL 819 (844)
Q Consensus 767 vnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~ 819 (844)
-.|..+++.++++++ ++++.+++||| +.|| |.+ |+++++ |+.+.+
T Consensus 322 kpk~~~~~~~~~~~g------i~~~~~i~vGD-~~~Di~~a~~aG~~va~-~~~~~~ 370 (415)
T 3p96_A 322 AGKATALREFAQRAG------VPMAQTVAVGD-GANDIDMLAAAGLGIAF-NAKPAL 370 (415)
T ss_dssp HHHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHHHHHSSEEEEE-SCCHHH
T ss_pred cchHHHHHHHHHHcC------cChhhEEEEEC-CHHHHHHHHHCCCeEEE-CCCHHH
Confidence 368889999999998 78999999999 8899 666 899999 666543
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.00036 Score=64.51 Aligned_cols=54 Identities=19% Similarity=0.147 Sum_probs=43.5
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (844)
.|+|++|+||||... ..+.|.+.++|++|.+ .|..++|+|+++...+...+..+
T Consensus 2 ~k~i~~D~DgtL~~~---------------~~~~~~~~~~l~~L~~-~G~~~~i~S~~~~~~~~~~l~~~ 55 (137)
T 2pr7_A 2 MRGLIVDYAGVLDGT---------------DEDQRRWRNLLAAAKK-NGVGTVILSNDPGGLGAAPIREL 55 (137)
T ss_dssp CCEEEECSTTTTSSC---------------HHHHHHHHHHHHHHHH-TTCEEEEEECSCCGGGGHHHHHH
T ss_pred CcEEEEeccceecCC---------------CccCccHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHC
Confidence 478999999999432 3467889999999988 59999999999887766665543
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0083 Score=67.47 Aligned_cols=150 Identities=12% Similarity=0.005 Sum_probs=87.5
Q ss_pred CcEEEEEeccccc-----CCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCC
Q 003145 363 RKVMLGVDRLDMI-----KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (844)
Q Consensus 363 ~~vil~VdRld~~-----KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~ 437 (844)
..++++.|++... |.+..+++|+..+ + +.++.++.+. +.. .+. . ..
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~----~~~v~~~g~~-----~~~----~l~----~----~~--- 318 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV-----D----AEIIATFDAQ-----QLE----GVA----N----IP--- 318 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS-----S----SEEEECCCTT-----TTS----SCS----S----CC---
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC-----C----CEEEEEECCc-----chh----hhc----c----CC---
Confidence 4578889998764 8888888888642 2 2344433211 100 010 0 00
Q ss_pred cccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCC----chhhc--cCCeEEECC
Q 003145 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNP 511 (844)
Q Consensus 438 ~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G----~~~~l--g~~g~lvnP 511 (844)
..|. +.+.+++.+ +|..||++|.. .| ..+..|++++| .|+|+..+.+ .++.+ ...|+.+++
T Consensus 319 -~~v~-~~~~~~~~~---ll~~ad~~V~~---~G-~~t~~Ea~~~G----~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~ 385 (441)
T 2yjn_A 319 -DNVR-TVGFVPMHA---LLPTCAATVHH---GG-PGSWHTAAIHG----VPQVILPDGWDTGVRAQRTQEFGAGIALPV 385 (441)
T ss_dssp -SSEE-ECCSCCHHH---HGGGCSEEEEC---CC-HHHHHHHHHTT----CCEEECCCSHHHHHHHHHHHHHTSEEECCT
T ss_pred -CCEE-EecCCCHHH---HHhhCCEEEEC---CC-HHHHHHHHHhC----CCEEEeCCcccHHHHHHHHHHcCCEEEccc
Confidence 1254 478888754 58999999973 34 46899999996 7888887643 23333 246888887
Q ss_pred C--CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 003145 512 W--NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETF 555 (844)
Q Consensus 512 ~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~f 555 (844)
. +.++++++|.++|+++ +.++++.+...+.........-++.+
T Consensus 386 ~~~~~~~l~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i 430 (441)
T 2yjn_A 386 PELTPDQLRESVKRVLDDP-AHRAGAARMRDDMLAEPSPAEVVGIC 430 (441)
T ss_dssp TTCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 5 8899999999999864 33333333333434445555544433
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.00093 Score=70.54 Aligned_cols=58 Identities=10% Similarity=0.209 Sum_probs=47.2
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcC---CChhhHHHhhcccCc
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKNFQEYNL 662 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SG---R~~~~l~~~~~~l~l 662 (844)
.+.|+|+||+||||++.. .+.+.+.++|++|.+ .|..|+++|| |+...+.+.+..+++
T Consensus 12 ~~~k~i~~D~DGtL~~~~---------------~~~~~~~~~l~~l~~-~g~~~~~~Tn~~~r~~~~~~~~l~~lg~ 72 (284)
T 2hx1_A 12 PKYKCIFFDAFGVLKTYN---------------GLLPGIENTFDYLKA-QGQDYYIVTNDASRSPEQLADSYHKLGL 72 (284)
T ss_dssp GGCSEEEECSBTTTEETT---------------EECTTHHHHHHHHHH-TTCEEEEEECCCSSCHHHHHHHHHHTTC
T ss_pred hcCCEEEEcCcCCcCcCC---------------eeChhHHHHHHHHHH-CCCEEEEEeCCCCcCHHHHHHHHHHCCc
Confidence 357899999999999762 245788999999998 5999999995 888888887777643
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0016 Score=65.26 Aligned_cols=67 Identities=13% Similarity=0.140 Sum_probs=45.3
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhh
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF 657 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~ 657 (844)
+..|+|+||+||||++...... ...........+-+.+.++|+.|.+ .|..++|+||.+...+.+..
T Consensus 4 ~~~kav~fDlDGTL~d~~~~~~-~~~~~~~~~~~~~pg~~e~L~~L~~-~g~~~~i~T~~~~~~~~~~~ 70 (196)
T 2oda_A 4 PTFPALLFGLSGCLVDFGAQAA-TSDTPDDEHAQLTPGAQNALKALRD-QGMPCAWIDELPEALSTPLA 70 (196)
T ss_dssp -CCSCEEEETBTTTBCTTSTTT-SCSSCCGGGGSBCTTHHHHHHHHHH-HTCCEEEECCSCHHHHHHHH
T ss_pred CcCCEEEEcCCCceEecccccc-chhhcccccCCcCcCHHHHHHHHHH-CCCEEEEEcCChHHHHHHhc
Confidence 4578999999999997421110 0000001123567899999999987 49999999999887764433
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0065 Score=66.80 Aligned_cols=105 Identities=15% Similarity=0.097 Sum_probs=68.6
Q ss_pred EEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCC-----CCchhhc--cCCeEEECCC-
Q 003145 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF-----AGAAQSL--GAGAILVNPW- 512 (844)
Q Consensus 441 v~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~-----~G~~~~l--g~~g~lvnP~- 512 (844)
+. +.+.+++. .++..||++|..|- . .+.+|++++| .|+|+.-. .+.++.+ ...|+.+++.
T Consensus 283 v~-~~~~~~~~---~ll~~ad~~v~~~G---~-~t~~Ea~~~G----~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~ 350 (402)
T 3ia7_A 283 VE-AHQWIPFH---SVLAHARACLTHGT---T-GAVLEAFAAG----VPLVLVPHFATEAAPSAERVIELGLGSVLRPDQ 350 (402)
T ss_dssp EE-EESCCCHH---HHHTTEEEEEECCC---H-HHHHHHHHTT----CCEEECGGGCGGGHHHHHHHHHTTSEEECCGGG
T ss_pred EE-EecCCCHH---HHHhhCCEEEECCC---H-HHHHHHHHhC----CCEEEeCCCcccHHHHHHHHHHcCCEEEccCCC
Confidence 55 36777776 78999999997753 2 5679999996 67775433 2344444 3457888876
Q ss_pred -CHHHHHHHHHHHhcCCHHHHHHHHHHH-HHHHHhcCHHHHHHHHHHHH
Q 003145 513 -NITEVANAIARALNMSPEEREKRHWHN-FTHVTTHTAQEWAETFVSEL 559 (844)
Q Consensus 513 -d~~~~A~ai~~aL~m~~~er~~r~~~~-~~~v~~~~~~~W~~~fl~~l 559 (844)
|.++++++|.++|+++ +.++++++. .+....+.+.+-++.+.+.+
T Consensus 351 ~~~~~l~~~~~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 397 (402)
T 3ia7_A 351 LEPASIREAVERLAADS--AVRERVRRMQRDILSSGGPARAADEVEAYL 397 (402)
T ss_dssp CSHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHhhCChHHHHHHHHHHHH
Confidence 8999999999999864 233333333 33344455555555444433
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0037 Score=61.79 Aligned_cols=71 Identities=15% Similarity=0.152 Sum_probs=48.4
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCCh---hhHHHhhcccC
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR---NVLDKNFQEYN 661 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~---~~l~~~~~~l~ 661 (844)
..|+|+||+||||+......-.......-....+.+.+.++|++|.+ .|.+++|+|+.+. ..+...+..++
T Consensus 2 ~ik~vifD~DgtL~~~~~~~y~~~~~~~~~~~~~~~g~~~~L~~L~~-~g~~~~i~Tn~~~~~~~~~~~~l~~~g 75 (189)
T 3ib6_A 2 SLTHVIWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQ-LGFKQAILSNTATSDTEVIKRVLTNFG 75 (189)
T ss_dssp -CCEEEECTBTTTBCCCTTSSCSSCGGGCTTCCBCTTHHHHHHHHHH-TTCEEEEEECCSSCCHHHHHHHHHHTT
T ss_pred CceEEEEcCCCceeeccchhhhhHHHhccCCceeCcCHHHHHHHHHH-CCCEEEEEECCCccchHHHHHHHHhcC
Confidence 36899999999998742200000000000234678899999999998 5999999999886 67777777654
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0068 Score=75.91 Aligned_cols=40 Identities=3% Similarity=-0.021 Sum_probs=35.3
Q ss_pred cCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC
Q 003145 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (844)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (844)
.++.+++.++|++|.+ .|++|+++|||....+..+.++++
T Consensus 603 Dp~r~~~~~aI~~l~~-aGI~vvmiTGd~~~tA~~ia~~lg 642 (1034)
T 3ixz_A 603 DPPRATVPDAVLKCRT-AGIRVIMVTGDHPITAKAIAASVG 642 (1034)
T ss_pred CCCchhHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHcC
Confidence 3578899999999988 599999999999999988888754
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=96.44 E-value=0.013 Score=65.06 Aligned_cols=106 Identities=10% Similarity=-0.026 Sum_probs=67.7
Q ss_pred EEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCC----CCchhhc--cCCeEEECCC--
Q 003145 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF----AGAAQSL--GAGAILVNPW-- 512 (844)
Q Consensus 441 v~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~----~G~~~~l--g~~g~lvnP~-- 512 (844)
+.+ .+.+++. .++..||++|..+ |. .+..|++++| .|+|+--. ...++.+ ...|+.+++.
T Consensus 299 v~~-~~~~~~~---~ll~~ad~~v~~~---G~-~t~~Ea~~~G----~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~ 366 (415)
T 3rsc_A 299 VEA-HRWVPHV---KVLEQATVCVTHG---GM-GTLMEALYWG----RPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKA 366 (415)
T ss_dssp EEE-ESCCCHH---HHHHHEEEEEESC---CH-HHHHHHHHTT----CCEEECCCSGGGHHHHHHHHHHTCEEECCGGGC
T ss_pred EEE-EecCCHH---HHHhhCCEEEECC---cH-HHHHHHHHhC----CCEEEeCCcchHHHHHHHHHHcCCEEEcccCCC
Confidence 553 5777765 7888999999765 33 4679999996 67777433 2234444 2457888775
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 003145 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559 (844)
Q Consensus 513 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l 559 (844)
+.++++++|.++|+++ +.+..+.+...+......+.+.++.+.+.+
T Consensus 367 ~~~~l~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 412 (415)
T 3rsc_A 367 DGDTLLAAVGAVAADP-ALLARVEAMRGHVRRAGGAARAADAVEAYL 412 (415)
T ss_dssp CHHHHHHHHHHHHTCH-HHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 8899999999999864 233333333333444455555555444433
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=96.43 E-value=0.011 Score=65.40 Aligned_cols=151 Identities=10% Similarity=0.003 Sum_probs=88.1
Q ss_pred CCcEEEEEeccccc-CCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCccc
Q 003145 362 GRKVMLGVDRLDMI-KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (844)
Q Consensus 362 ~~~vil~VdRld~~-KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~p 440 (844)
.+.+++++|++... |+...+..+++.+.+ . + +.+++++.+. +.. .+. .+ . ..
T Consensus 232 ~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~-~-~----~~~v~~~g~~--~~~-------~l~----~~------~--~~ 284 (398)
T 3oti_A 232 RPEVAITMGTIELQAFGIGAVEPIIAAAGE-V-D----ADFVLALGDL--DIS-------PLG----TL------P--RN 284 (398)
T ss_dssp SCEEEECCTTTHHHHHCGGGHHHHHHHHHT-S-S----SEEEEECTTS--CCG-------GGC----SC------C--TT
T ss_pred CCEEEEEcCCCccccCcHHHHHHHHHHHHc-C-C----CEEEEEECCc--Chh-------hhc----cC------C--Cc
Confidence 35677889999655 354444444444432 2 2 3355555432 100 110 00 0 13
Q ss_pred EEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEE----eCCCCch--hhc--cCCeEEECCC
Q 003145 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLIL----SEFAGAA--QSL--GAGAILVNPW 512 (844)
Q Consensus 441 v~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVl----Se~~G~~--~~l--g~~g~lvnP~ 512 (844)
|.+ .+.++.. .++..||+||.. |-..+..|||+|| .|+|+ .+-.+.+ +.+ ...|+.+++.
T Consensus 285 v~~-~~~~~~~---~ll~~ad~~v~~----~G~~t~~Eal~~G----~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~ 352 (398)
T 3oti_A 285 VRA-VGWTPLH---TLLRTCTAVVHH----GGGGTVMTAIDAG----IPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSD 352 (398)
T ss_dssp EEE-ESSCCHH---HHHTTCSEEEEC----CCHHHHHHHHHHT----CCEEECCCTTCCSSCTTHHHHHHHTSEEECCGG
T ss_pred EEE-EccCCHH---HHHhhCCEEEEC----CCHHHHHHHHHhC----CCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCC
Confidence 553 6777654 567789999953 4446789999996 67777 4556666 666 3468888876
Q ss_pred --CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 003145 513 --NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV 556 (844)
Q Consensus 513 --d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl 556 (844)
+.+.++ ++|++ ++.|+++.+...+......+...++.+.
T Consensus 353 ~~~~~~l~----~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 393 (398)
T 3oti_A 353 KVDADLLR----RLIGD-ESLRTAAREVREEMVALPTPAETVRRIV 393 (398)
T ss_dssp GCCHHHHH----HHHHC-HHHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred CCCHHHHH----HHHcC-HHHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 455554 77775 3445544455555566777777666543
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=96.38 E-value=0.002 Score=63.07 Aligned_cols=62 Identities=18% Similarity=0.231 Sum_probs=53.0
Q ss_pred EEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcchhhhcCCHHHHHHHHHHH
Q 003145 762 VRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSLSKEKKRKVHQLFGIFLRF 837 (844)
Q Consensus 762 V~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~a~~~l~~~~~v~~~l~~~ 837 (844)
..|...+|+.+++.+ . ++.+++||| +.|| |++ |++|+|+|+.+ .|.+.+++.+++..+|+.+
T Consensus 134 ~~~~~~~k~~~l~~l----~--------~~~~i~iGD-~~~Di~~~~~ag~~v~~~~~~~-~ad~v~~~~~el~~~l~~l 199 (201)
T 4ap9_A 134 IRLRFRDKGEFLKRF----R--------DGFILAMGD-GYADAKMFERADMGIAVGREIP-GADLLVKDLKELVDFIKNL 199 (201)
T ss_dssp EECCSSCHHHHHGGG----T--------TSCEEEEEC-TTCCHHHHHHCSEEEEESSCCT-TCSEEESSHHHHHHHHHTC
T ss_pred CcCCccCHHHHHHhc----C--------cCcEEEEeC-CHHHHHHHHhCCceEEECCCCc-cccEEEccHHHHHHHHHHh
Confidence 455667899999877 2 688999999 8899 777 89999999988 8899999999999998765
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0022 Score=64.39 Aligned_cols=69 Identities=10% Similarity=0.017 Sum_probs=57.4
Q ss_pred eCC--CCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCc-EEEeCCCCc-------c----hhhhcC
Q 003145 764 AVG--VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFL-IQVGSSINS-------L----SKEKKR 825 (844)
Q Consensus 764 p~g--vnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~-Iavgna~~~-------~----a~~~l~ 825 (844)
+.+ .+|+.+++.++++++ ++++.+++||| +.|| |++ |++ |.|+++... + |.+.++
T Consensus 138 ~~~~~kpk~~~~~~~~~~l~------~~~~~~i~iGD-~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~ 210 (229)
T 2fdr_A 138 GADRVKPKPDIFLHGAAQFG------VSPDRVVVVED-SVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVIS 210 (229)
T ss_dssp CTTCCTTSSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEES
T ss_pred ccCCCCcCHHHHHHHHHHcC------CChhHeEEEcC-CHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeec
Confidence 667 899999999999999 78999999999 8899 777 776 777776542 2 677899
Q ss_pred CHHHHHHHHHHHhh
Q 003145 826 KVHQLFGIFLRFSY 839 (844)
Q Consensus 826 ~~~~v~~~l~~~~~ 839 (844)
+..++..+|+.+..
T Consensus 211 ~~~el~~~l~~~~~ 224 (229)
T 2fdr_A 211 RMQDLPAVIAAMAE 224 (229)
T ss_dssp CGGGHHHHHHHHTC
T ss_pred CHHHHHHHHHHhhh
Confidence 99999999888743
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=96.23 E-value=0.0033 Score=62.37 Aligned_cols=65 Identities=11% Similarity=0.009 Sum_probs=55.1
Q ss_pred CCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cC-cEEEeCCCC---cchhhhcCCHHHHHHHHHH
Q 003145 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QF-LIQVGSSIN---SLSKEKKRKVHQLFGIFLR 836 (844)
Q Consensus 765 ~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~-~Iavgna~~---~~a~~~l~~~~~v~~~l~~ 836 (844)
.+-.|+.+++.++++++ ++++.+++||| +.|| |.+ |+ +|+|+++.+ +.|.+.+++..|+..+|+.
T Consensus 125 ~~kp~~~~~~~~~~~~g------~~~~~~i~iGD-~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~~~~~el~~~~~~ 197 (205)
T 3m9l_A 125 PPKPHPGGLLKLAEAWD------VSPSRMVMVGD-YRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHARDCAQLRDLLSA 197 (205)
T ss_dssp CCTTSSHHHHHHHHHTT------CCGGGEEEEES-SHHHHHHHHHHTCEEEECSSSSCSCGGGCSEECSSHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHcCCEEEEEeCCCCcccccCCEEeCCHHHHHHHHHh
Confidence 45677889999999999 78999999999 8899 666 87 999999864 4578889999999888753
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=96.22 E-value=0.0041 Score=63.51 Aligned_cols=68 Identities=3% Similarity=-0.215 Sum_probs=57.0
Q ss_pred EEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeC--------CC-----Ccchhhh
Q 003145 761 EVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGS--------SI-----NSLSKEK 823 (844)
Q Consensus 761 EV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgn--------a~-----~~~a~~~ 823 (844)
|..+.+..|+.+++.++++++ ++++.+++||| +.|| |.+ |++++|.| +. ...|.+.
T Consensus 167 ~~~~~~kp~~~~~~~~~~~lg------i~~~~~~~iGD-~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v 239 (254)
T 3umc_A 167 DLFGHYKPDPQVYLGACRLLD------LPPQEVMLCAA-HNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLI 239 (254)
T ss_dssp HHHTCCTTSHHHHHHHHHHHT------CCGGGEEEEES-CHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEE
T ss_pred cccccCCCCHHHHHHHHHHcC------CChHHEEEEcC-chHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEE
Confidence 445678899999999999999 78999999999 8999 777 99999998 22 2346778
Q ss_pred cCCHHHHHHHHH
Q 003145 824 KRKVHQLFGIFL 835 (844)
Q Consensus 824 l~~~~~v~~~l~ 835 (844)
+++..++..+|.
T Consensus 240 ~~~l~el~~~l~ 251 (254)
T 3umc_A 240 ASDLLDLHRQLA 251 (254)
T ss_dssp ESSHHHHHHHHH
T ss_pred ECCHHHHHHHhc
Confidence 999999988874
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=96.18 E-value=0.0044 Score=60.72 Aligned_cols=71 Identities=17% Similarity=0.217 Sum_probs=49.0
Q ss_pred hcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCC---------------Chhh
Q 003145 588 RSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS---------------DRNV 652 (844)
Q Consensus 588 ~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR---------------~~~~ 652 (844)
.+..|+++||+||||+...... . .........+.|.+.++|++|.+ .|.+++|+|+. ....
T Consensus 11 ~~~~k~~~~D~Dgtl~~~~~~~--~-~~~~~~~~~~~pg~~e~L~~L~~-~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~ 86 (176)
T 2fpr_A 11 GSSQKYLFIDRDGTLISEPPSD--F-QVDRFDKLAFEPGVIPQLLKLQK-AGYKLVMITNQDGLGTQSFPQADFDGPHNL 86 (176)
T ss_dssp --CCEEEEECSBTTTBCCC--C--C-CCCSGGGCCBCTTHHHHHHHHHH-TTEEEEEEEECTTTTBTTBCHHHHHHHHHH
T ss_pred CCcCcEEEEeCCCCeEcCCCCC--c-CcCCHHHCcCCccHHHHHHHHHH-CCCEEEEEECCccccccccchHhhhhhHHH
Confidence 4678999999999999763100 0 00011245678899999999998 59999999998 4556
Q ss_pred HHHhhcccCc
Q 003145 653 LDKNFQEYNL 662 (844)
Q Consensus 653 l~~~~~~l~l 662 (844)
+...+..+++
T Consensus 87 ~~~~l~~~gl 96 (176)
T 2fpr_A 87 MMQIFTSQGV 96 (176)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHcCC
Confidence 6666666554
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=96.15 E-value=0.0023 Score=62.53 Aligned_cols=61 Identities=18% Similarity=0.105 Sum_probs=51.8
Q ss_pred CCCH--HHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCc-EEEeCCCCcchhhhcCCHHHHHHHH
Q 003145 766 GVTK--GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFL-IQVGSSINSLSKEKKRKVHQLFGIF 834 (844)
Q Consensus 766 gvnK--G~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~-Iavgna~~~~a~~~l~~~~~v~~~l 834 (844)
+..| ..+++.++++++ ++++.+++||| +.|| |++ |++ |+|+|+. +.|.+.+++..++..+|
T Consensus 137 ~~~Kp~~~~~~~~~~~~~------i~~~~~~~iGD-~~nDi~~~~~aG~~~i~~~~~~-~~a~~v~~~~~el~~~l 204 (207)
T 2go7_A 137 FVRKPSPEAATYLLDKYQ------LNSDNTYYIGD-RTLDVEFAQNSGIQSINFLEST-YEGNHRIQALADISRIF 204 (207)
T ss_dssp CCCTTSSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHHHHHHTCEEEESSCCS-CTTEEECSSTTHHHHHT
T ss_pred CCCCCCcHHHHHHHHHhC------CCcccEEEECC-CHHHHHHHHHCCCeEEEEecCC-CCCCEEeCCHHHHHHHH
Confidence 3455 899999999999 78999999999 8999 787 886 8899987 57788899999987765
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=96.03 E-value=0.11 Score=57.62 Aligned_cols=146 Identities=11% Similarity=0.014 Sum_probs=84.0
Q ss_pred CCcEEEEEeccc-ccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCccc
Q 003145 362 GRKVMLGVDRLD-MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (844)
Q Consensus 362 ~~~vil~VdRld-~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~p 440 (844)
.+.|+++.|++. +.+.+...++|++.+ + ++ ++.++++.... ..+ .. ..
T Consensus 221 ~~~Vlv~~Gs~~~~~~~~~~~~~al~~~----~-~~----vv~~~g~~~~~----------------~~~----~~--~~ 269 (404)
T 3h4t_A 221 SPPVYVGFGSGPAPAEAARVAIEAVRAQ----G-RR----VVLSSGWAGLG----------------RID----EG--DD 269 (404)
T ss_dssp SCCEEECCTTSCCCTTHHHHHHHHHHHT----T-CC----EEEECTTTTCC----------------CSS----CC--TT
T ss_pred CCeEEEECCCCCCcHHHHHHHHHHHHhC----C-CE----EEEEeCCcccc----------------ccc----CC--CC
Confidence 456778899998 666677777777653 2 22 34333221100 000 00 13
Q ss_pred EEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCc----hhhc--cCCeEEECCC--
Q 003145 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA----AQSL--GAGAILVNPW-- 512 (844)
Q Consensus 441 v~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~----~~~l--g~~g~lvnP~-- 512 (844)
+.+ .+++++.+ ++..||++|..+ |. .+..|++++| .|+|+--+.+- +..+ ...|+.+++.
T Consensus 270 v~~-~~~~~~~~---ll~~~d~~v~~g---G~-~t~~Eal~~G----vP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~ 337 (404)
T 3h4t_A 270 CLV-VGEVNHQV---LFGRVAAVVHHG---GA-GTTTAVTRAG----APQVVVPQKADQPYYAGRVADLGVGVAHDGPTP 337 (404)
T ss_dssp EEE-ESSCCHHH---HGGGSSEEEECC---CH-HHHHHHHHHT----CCEEECCCSTTHHHHHHHHHHHTSEEECSSSSC
T ss_pred EEE-ecCCCHHH---HHhhCcEEEECC---cH-HHHHHHHHcC----CCEEEcCCcccHHHHHHHHHHCCCEeccCcCCC
Confidence 543 57788655 567899999654 33 5678999996 67776554432 1112 1346777653
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHH
Q 003145 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAE 553 (844)
Q Consensus 513 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 553 (844)
+.++++++|.++|+ + +.++++++..+.+....+.+.++
T Consensus 338 ~~~~l~~ai~~ll~-~--~~~~~~~~~~~~~~~~~~~~~~~ 375 (404)
T 3h4t_A 338 TVESLSAALATALT-P--GIRARAAAVAGTIRTDGTTVAAK 375 (404)
T ss_dssp CHHHHHHHHHHHTS-H--HHHHHHHHHHTTCCCCHHHHHHH
T ss_pred CHHHHHHHHHHHhC-H--HHHHHHHHHHHHHhhhHHHHHHH
Confidence 78999999999997 3 33444444444333333333333
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=95.70 E-value=0.0026 Score=64.49 Aligned_cols=60 Identities=10% Similarity=0.065 Sum_probs=37.9
Q ss_pred CCeEEEEecCCccCCCCCC---------CCCCCccc-c-----------ccccCCChhHHHHHHHhhcCCCCcEEEEcCC
Q 003145 590 NNRLLILGFNATLTEPVDT---------PGRRGDQI-R-----------EMELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~---------p~~~~~~~-~-----------~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR 648 (844)
+.|.|+||+||||++.... +. ..... . .....+.+.+.++|+.|.+ .|..++|+||+
T Consensus 36 ~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~-~G~~l~ivTn~ 113 (211)
T 2b82_A 36 PPMAVGFDIDDTVLFSSPGFWRGKKTFSPE-SEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVR-RGDAIFFVTGR 113 (211)
T ss_dssp CCCEEEECCBTTTEECHHHHHHHHHHHCTT-SSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHH-HTCEEEEEECS
T ss_pred CCCEEEEcCCCCCCcCcHHHHHHHHHhhHH-HHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHH-CCCEEEEEcCC
Confidence 5789999999999985210 00 00000 0 0011234578888999887 48999999999
Q ss_pred Chh
Q 003145 649 DRN 651 (844)
Q Consensus 649 ~~~ 651 (844)
+..
T Consensus 114 ~~~ 116 (211)
T 2b82_A 114 SPT 116 (211)
T ss_dssp CCC
T ss_pred cHH
Confidence 754
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=95.66 E-value=0.0038 Score=64.55 Aligned_cols=70 Identities=11% Similarity=-0.028 Sum_probs=54.6
Q ss_pred EeCCCCHHHHHHHHHHHhcccCcCCCCC-ceEEEEeeCCCch--hhc--c---CcEEEeCCC------------------
Q 003145 763 RAVGVTKGAAIDRILAEIVHSKKMKTAI-DYVLCIGHFLGKV--LLT--Q---FLIQVGSSI------------------ 816 (844)
Q Consensus 763 ~p~gvnKG~al~~Ll~~l~~~~~~~~~~-d~vlaiGD~~~nD--Mf~--g---~~Iavgna~------------------ 816 (844)
.+.+.+|+.++..+++++| +++ +.+++||| +.|| |++ | ++|++|++.
T Consensus 156 ~~~~kp~~~~~~~~~~~lg------i~~~~~~i~iGD-~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~ 228 (267)
T 1swv_A 156 VPAGRPYPWMCYKNAMELG------VYPMNHMIKVGD-TVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELRE 228 (267)
T ss_dssp SSCCTTSSHHHHHHHHHHT------CCSGGGEEEEES-SHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHhC------CCCCcCEEEEeC-CHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhh
Confidence 3567889999999999999 677 99999999 8899 777 5 345556552
Q ss_pred ------C----cchhhhcCCHHHHHHHHHHHhh
Q 003145 817 ------N----SLSKEKKRKVHQLFGIFLRFSY 839 (844)
Q Consensus 817 ------~----~~a~~~l~~~~~v~~~l~~~~~ 839 (844)
+ ..|.+.+++..++..+|..+..
T Consensus 229 ~~~~~~~~~~~~~ad~v~~~~~el~~~l~~~~~ 261 (267)
T 1swv_A 229 KIEVVRNRFVENGAHFTIETMQELESVMEHIEK 261 (267)
T ss_dssp HHHHHHHHHHHTTCSEEESSGGGHHHHHHHHTC
T ss_pred hhhhHHHHHHhcCCceeccCHHHHHHHHHHHhh
Confidence 1 1267789999999998877643
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=95.63 E-value=0.0042 Score=64.99 Aligned_cols=74 Identities=9% Similarity=0.164 Sum_probs=49.6
Q ss_pred cCCeEEEEecCCccCCCCCCCC-----CCC-cc------ccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChh----h
Q 003145 589 SNNRLLILGFNATLTEPVDTPG-----RRG-DQ------IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRN----V 652 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~-----~~~-~~------~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~----~ 652 (844)
.++.+++||+||||++....-. ... +. .......+-|.+++.|+.|.+ .|..|+|+|||+.. .
T Consensus 56 g~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L~~-~G~~i~ivTgR~~~~~r~~ 134 (260)
T 3pct_A 56 GKKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNA-NGGTMFFVSNRRDDVEKAG 134 (260)
T ss_dssp --CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHHHH-TTCEEEEEEEEETTTSHHH
T ss_pred CCCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHHHH-CCCeEEEEeCCCccccHHH
Confidence 4557999999999997631000 000 00 011235567789999999998 59999999999754 6
Q ss_pred HHHhhcccCce
Q 003145 653 LDKNFQEYNLW 663 (844)
Q Consensus 653 l~~~~~~l~l~ 663 (844)
...++..+++.
T Consensus 135 T~~~L~~lGi~ 145 (260)
T 3pct_A 135 TVDDMKRLGFT 145 (260)
T ss_dssp HHHHHHHHTCC
T ss_pred HHHHHHHcCcC
Confidence 77778776553
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=95.56 E-value=0.22 Score=59.86 Aligned_cols=172 Identities=15% Similarity=0.115 Sum_probs=109.5
Q ss_pred EEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEe
Q 003145 365 VMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHL 444 (844)
Q Consensus 365 vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~ 444 (844)
++.+.-++. |=-+..++.+.++|++-|+- +|++...+. ..-..++ +.+.+ +|-. -..|+|
T Consensus 525 ~f~~fN~~~--Ki~p~~~~~W~~IL~~vP~S----~L~Ll~~~~----~~~~~l~----~~~~~----~gi~-~~r~~f- 584 (723)
T 4gyw_A 525 VYCNFNQLY--KIDPSTLQMWANILKRVPNS----VLWLLRFPA----VGEPNIQ----QYAQN----MGLP-QNRIIF- 584 (723)
T ss_dssp EEECCSCGG--GCCHHHHHHHHHHHHHCSSE----EEEEEETTG----GGHHHHH----HHHHH----TTCC-GGGEEE-
T ss_pred EEEeCCccc--cCCHHHHHHHHHHHHhCCCC----eEEEEeCcH----HHHHHHH----HHHHh----cCCC-cCeEEE-
Confidence 333455544 45789999999999999974 476665432 1112233 33322 2221 124665
Q ss_pred CCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCc-hh-----hc---cCCeEEECCCCHH
Q 003145 445 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA-AQ-----SL---GAGAILVNPWNIT 515 (844)
Q Consensus 445 ~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~-~~-----~l---g~~g~lvnP~d~~ 515 (844)
.+..+.++..+.|+.+||+|-|--+-| +.+..||+.+ |++|+|--+.. +. .| |-.-++ -.|.+
T Consensus 585 ~~~~~~~~~l~~~~~~Di~LDt~p~~g-~tT~~eal~~-----GvPvvt~~g~~~~sR~~~s~l~~~gl~e~i--a~~~~ 656 (723)
T 4gyw_A 585 SPVAPKEEHVRRGQLADVCLDTPLCNG-HTTGMDVLWA-----GTPMVTMPGETLASRVAASQLTCLGCLELI--AKNRQ 656 (723)
T ss_dssp EECCCHHHHHHHGGGCSEEECCSSSCC-SHHHHHHHHT-----TCCEEBCCCSSGGGTHHHHHHHHHTCGGGB--CSSHH
T ss_pred CCCCCHHHHHHHhCCCeEEeCCCCcCC-HHHHHHHHHc-----CCCEEEccCCCccHhHHHHHHHHcCCcccc--cCCHH
Confidence 677899999999999999999998877 7889999999 66776633211 11 11 222222 25677
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHhHHH
Q 003145 516 EVANAIARALNMSPEEREKRHWHNFTHVTT---HTAQEWAETFVSELNDTVVE 565 (844)
Q Consensus 516 ~~A~ai~~aL~m~~~er~~r~~~~~~~v~~---~~~~~W~~~fl~~l~~~~~~ 565 (844)
+..+.-.++-+++ +.+.....++++...+ +|...|++.|...+..++..
T Consensus 657 ~Y~~~a~~la~d~-~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r 708 (723)
T 4gyw_A 657 EYEDIAVKLGTDL-EYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEH 708 (723)
T ss_dssp HHHHHHHHHHHCH-HHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCH-HHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHH
Confidence 7666655555544 3444444555555443 69999999999888887654
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=95.35 E-value=0.016 Score=58.75 Aligned_cols=67 Identities=6% Similarity=-0.206 Sum_probs=55.4
Q ss_pred eCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCC-------------CcchhhhcCC
Q 003145 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSI-------------NSLSKEKKRK 826 (844)
Q Consensus 764 p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~-------------~~~a~~~l~~ 826 (844)
..+-.|+.+++.+++++| ++++.+++||| +.|| |.+ |++++|.+.. ...+.+.+++
T Consensus 166 ~~~kp~~~~~~~~~~~lg------i~~~~~~~iGD-~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~ 238 (254)
T 3umg_A 166 RKYKPDPQAYLRTAQVLG------LHPGEVMLAAA-HNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATD 238 (254)
T ss_dssp TCCTTSHHHHHHHHHHTT------CCGGGEEEEES-CHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESS
T ss_pred CCCCCCHHHHHHHHHHcC------CChHHEEEEeC-ChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECC
Confidence 456678999999999999 78999999999 8999 666 8999999832 2345678999
Q ss_pred HHHHHHHHHHH
Q 003145 827 VHQLFGIFLRF 837 (844)
Q Consensus 827 ~~~v~~~l~~~ 837 (844)
..++..+|...
T Consensus 239 ~~el~~~l~~~ 249 (254)
T 3umg_A 239 ITDLAAQLRAG 249 (254)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHhcCC
Confidence 99999988753
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=95.35 E-value=0.006 Score=60.37 Aligned_cols=34 Identities=9% Similarity=0.088 Sum_probs=22.2
Q ss_pred CCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHH
Q 003145 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDK 655 (844)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~ 655 (844)
.+.|.+.++|++|.+.+|..++|+|+++...+..
T Consensus 73 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~ 106 (193)
T 2i7d_A 73 EPIPGALDAVREMNDLPDTQVFICTSPLLKYHHC 106 (193)
T ss_dssp CBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTT
T ss_pred ccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHH
Confidence 4556777777777652267777888776654433
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=95.34 E-value=0.0057 Score=64.06 Aligned_cols=73 Identities=7% Similarity=0.076 Sum_probs=50.7
Q ss_pred cCCeEEEEecCCccCCCCCC-------CCCCCcc------ccccccCCChhHHHHHHHhhcCCCCcEEEEcCCCh----h
Q 003145 589 SNNRLLILGFNATLTEPVDT-------PGRRGDQ------IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR----N 651 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~-------p~~~~~~------~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~----~ 651 (844)
.++.+|+||+||||++.... .... +. .......+-|.+++.|+.|.+ .|..|+|+|||+. .
T Consensus 56 ~~~~avVfDIDgTlldn~~y~~~~~~~~~~f-~~~~w~~wv~~~~~~~~pG~~ell~~L~~-~G~ki~ivTgR~~~~~r~ 133 (262)
T 3ocu_A 56 GKKKAVVADLNETMLDNSPYAGWQVQNNKPF-DGKDWTRWVDARQSRAVPGAVEFNNYVNS-HNGKVFYVTNRKDSTEKS 133 (262)
T ss_dssp TCEEEEEECCBTTTEECHHHHHHHHHHTCCC-CHHHHHHHHHHTCCEECTTHHHHHHHHHH-TTEEEEEEEEEETTTTHH
T ss_pred CCCeEEEEECCCcCCCCchhhhhhccccccC-CHHHHHHHHHcCCCCCCccHHHHHHHHHH-CCCeEEEEeCCCccchHH
Confidence 45679999999999976310 0000 00 011244567789999999998 5999999999975 4
Q ss_pred hHHHhhcccCce
Q 003145 652 VLDKNFQEYNLW 663 (844)
Q Consensus 652 ~l~~~~~~l~l~ 663 (844)
....++..+++.
T Consensus 134 ~T~~~L~~lGi~ 145 (262)
T 3ocu_A 134 GTIDDMKRLGFN 145 (262)
T ss_dssp HHHHHHHHHTCS
T ss_pred HHHHHHHHcCcC
Confidence 667778776654
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=95.34 E-value=0.0067 Score=60.76 Aligned_cols=69 Identities=6% Similarity=-0.069 Sum_probs=54.9
Q ss_pred eCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEE----eCCCC---cchhhhcCCHHHHHH
Q 003145 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQV----GSSIN---SLSKEKKRKVHQLFG 832 (844)
Q Consensus 764 p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iav----gna~~---~~a~~~l~~~~~v~~ 832 (844)
..+..|+.+++.++++++ ++++.+++||| +.|| |.+ |++++| +++.+ ..+.+.+++..++..
T Consensus 149 ~~~kp~~~~~~~~~~~~~------~~~~~~~~iGD-~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~ 221 (230)
T 3um9_A 149 RLFKPHQKVYELAMDTLH------LGESEILFVSC-NSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLAS 221 (230)
T ss_dssp TCCTTCHHHHHHHHHHHT------CCGGGEEEEES-CHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHH
T ss_pred ccCCCChHHHHHHHHHhC------CCcccEEEEeC-CHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHH
Confidence 345677999999999999 78999999999 8899 666 898998 65544 367788999999998
Q ss_pred HHHHHhh
Q 003145 833 IFLRFSY 839 (844)
Q Consensus 833 ~l~~~~~ 839 (844)
+|..+.+
T Consensus 222 ~l~~~~~ 228 (230)
T 3um9_A 222 RFSPVDE 228 (230)
T ss_dssp TCCC---
T ss_pred HHHHhhh
Confidence 8876543
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=95.27 E-value=0.013 Score=58.91 Aligned_cols=65 Identities=9% Similarity=-0.005 Sum_probs=54.5
Q ss_pred eCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCC-Cch--hhc--cCcEEEeCCCC-----cchhhhcCCHHHHHHH
Q 003145 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL-GKV--LLT--QFLIQVGSSIN-----SLSKEKKRKVHQLFGI 833 (844)
Q Consensus 764 p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~-~nD--Mf~--g~~Iavgna~~-----~~a~~~l~~~~~v~~~ 833 (844)
..+..|+.+++.++++++ ++++.+++||| + .|| |.+ |++++|.|... ..+.+.+++..|+..+
T Consensus 159 ~~~kp~~~~~~~~~~~lg------i~~~~~~~iGD-~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~sl~e~~~~ 231 (240)
T 3qnm_A 159 GVLKPRPEIFHFALSATQ------SELRESLMIGD-SWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNL 231 (240)
T ss_dssp TCCTTSHHHHHHHHHHTT------CCGGGEEEEES-CTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESSTHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcC------CCcccEEEECC-CchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECCHHHHHHH
Confidence 356678999999999999 78999999999 8 599 666 89999999754 4577789999998877
Q ss_pred HH
Q 003145 834 FL 835 (844)
Q Consensus 834 l~ 835 (844)
++
T Consensus 232 ~~ 233 (240)
T 3qnm_A 232 LE 233 (240)
T ss_dssp TC
T ss_pred Hh
Confidence 53
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=95.10 E-value=0.017 Score=58.74 Aligned_cols=67 Identities=10% Similarity=-0.094 Sum_probs=54.4
Q ss_pred eCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cC-cEEEeCCCCc-------chhhhcCCHHHHH
Q 003145 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QF-LIQVGSSINS-------LSKEKKRKVHQLF 831 (844)
Q Consensus 764 p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~-~Iavgna~~~-------~a~~~l~~~~~v~ 831 (844)
..+..|+.+++.++++++ ++++.+++||| +.|| |.+ |+ +|.|.++... .|.+.+++..++.
T Consensus 163 ~~~kp~~~~~~~~~~~lg------~~~~~~i~vGD-~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el~ 235 (243)
T 3qxg_A 163 KYGKPNPEPYLMALKKGG------LKADEAVVIEN-APLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLC 235 (243)
T ss_dssp SSCTTSSHHHHHHHHHTT------CCGGGEEEEEC-SHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHHHH
T ss_pred CCCCCChHHHHHHHHHcC------CCHHHeEEEeC-CHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHHHH
Confidence 456788999999999999 78999999999 8899 666 65 4566665322 3677899999999
Q ss_pred HHHHHH
Q 003145 832 GIFLRF 837 (844)
Q Consensus 832 ~~l~~~ 837 (844)
.+|+.|
T Consensus 236 ~~l~~l 241 (243)
T 3qxg_A 236 DSWDTI 241 (243)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 999876
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=94.90 E-value=0.15 Score=56.53 Aligned_cols=122 Identities=12% Similarity=0.024 Sum_probs=76.4
Q ss_pred CCcEEEEEecc-cccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCccc
Q 003145 362 GRKVMLGVDRL-DMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (844)
Q Consensus 362 ~~~vil~VdRl-d~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~p 440 (844)
...++++.|++ +..|.+..+++|++.+ + .+ ++.+..+. + .+ . ..+. ..
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~----~-~~----~v~~~g~~--~-~~-------~----~~~~--------~~ 286 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH----G-RR----VILSRGWA--D-LV-------L----PDDG--------AD 286 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT----T-CC----EEECTTCT--T-CC-------C----SSCG--------GG
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC----C-Ce----EEEEeCCC--c-cc-------c----cCCC--------CC
Confidence 35688889999 6888888888888653 2 22 33332211 1 00 0 0000 12
Q ss_pred EEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCC----chhhc--cCCeEEECCC--
Q 003145 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW-- 512 (844)
Q Consensus 441 v~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G----~~~~l--g~~g~lvnP~-- 512 (844)
+. +.+.+++.+ ++..||+||.. -|. .+..|++++| .|+|+.-..+ .++.+ ...|+.+++.
T Consensus 287 v~-~~~~~~~~~---~l~~~d~~v~~---~G~-~t~~Ea~~~G----~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~ 354 (415)
T 1iir_A 287 CF-AIGEVNHQV---LFGRVAAVIHH---GGA-GTTHVAARAG----APQILLPQMADQPYYAGRVAELGVGVAHDGPIP 354 (415)
T ss_dssp EE-ECSSCCHHH---HGGGSSEEEEC---CCH-HHHHHHHHHT----CCEEECCCSTTHHHHHHHHHHHTSEEECSSSSC
T ss_pred EE-EeCcCChHH---HHhhCCEEEeC---CCh-hHHHHHHHcC----CCEEECCCCCccHHHHHHHHHCCCcccCCcCCC
Confidence 44 478888765 46999999974 344 6899999996 6777765543 23333 2357888763
Q ss_pred CHHHHHHHHHHHhcC
Q 003145 513 NITEVANAIARALNM 527 (844)
Q Consensus 513 d~~~~A~ai~~aL~m 527 (844)
+.++++++|.++ ++
T Consensus 355 ~~~~l~~~i~~l-~~ 368 (415)
T 1iir_A 355 TFDSLSAALATA-LT 368 (415)
T ss_dssp CHHHHHHHHHHH-TS
T ss_pred CHHHHHHHHHHH-cC
Confidence 789999999999 64
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=94.87 E-value=0.023 Score=57.00 Aligned_cols=66 Identities=14% Similarity=0.006 Sum_probs=54.1
Q ss_pred CCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEE----eCCCCc---chhhhcCCHHHHHHH
Q 003145 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQV----GSSINS---LSKEKKRKVHQLFGI 833 (844)
Q Consensus 765 ~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iav----gna~~~---~a~~~l~~~~~v~~~ 833 (844)
.+-.|..+++.++++++ ++++.+++||| +.|| |.+ |++++| +++.++ .|.+.+++..++..+
T Consensus 153 ~~kp~~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~ 225 (233)
T 3umb_A 153 LYKTAPAAYALAPRAFG------VPAAQILFVSS-NGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQF 225 (233)
T ss_dssp CCTTSHHHHTHHHHHHT------SCGGGEEEEES-CHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHHHHH
T ss_pred CCCcCHHHHHHHHHHhC------CCcccEEEEeC-CHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHHHHH
Confidence 34556889999999999 78999999999 8999 666 899998 777654 477889999999998
Q ss_pred HHHH
Q 003145 834 FLRF 837 (844)
Q Consensus 834 l~~~ 837 (844)
|...
T Consensus 226 l~~~ 229 (233)
T 3umb_A 226 VQAR 229 (233)
T ss_dssp HHC-
T ss_pred HHHh
Confidence 8653
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=94.86 E-value=0.022 Score=57.63 Aligned_cols=70 Identities=9% Similarity=-0.110 Sum_probs=56.2
Q ss_pred eCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCc-EEEeCCCC-------cchhhhcCCHHHHH
Q 003145 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFL-IQVGSSIN-------SLSKEKKRKVHQLF 831 (844)
Q Consensus 764 p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~-Iavgna~~-------~~a~~~l~~~~~v~ 831 (844)
..+..|+.+++.++++++ ++++.+++||| +.|| |.+ |+. |.|.++.. ..|.+.+++..++.
T Consensus 162 ~~~kp~~~~~~~~~~~lg------~~~~~~i~vGD-~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el~ 234 (247)
T 3dv9_A 162 KYGKPNPEPYLMALKKGG------FKPNEALVIEN-APLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFN 234 (247)
T ss_dssp SSCTTSSHHHHHHHHHHT------CCGGGEEEEEC-SHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHHH
T ss_pred CCCCCCCHHHHHHHHHcC------CChhheEEEeC-CHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHHH
Confidence 567789999999999999 78999999999 8899 666 543 55665432 15677899999999
Q ss_pred HHHHHHhhc
Q 003145 832 GIFLRFSYS 840 (844)
Q Consensus 832 ~~l~~~~~~ 840 (844)
.+|..+..+
T Consensus 235 ~~l~~~~~~ 243 (247)
T 3dv9_A 235 KNWETLQSA 243 (247)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988754
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=94.85 E-value=0.019 Score=56.76 Aligned_cols=40 Identities=13% Similarity=0.213 Sum_probs=33.9
Q ss_pred CCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
.+.+.+.++|+.|.+ .|..++|+|+.+...++..+..+++
T Consensus 70 ~~~~~~~~~l~~l~~-~g~~~~i~s~~~~~~~~~~l~~~~l 109 (205)
T 3m9l_A 70 RPAPGAVELVRELAG-RGYRLGILTRNARELAHVTLEAIGL 109 (205)
T ss_dssp EECTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTTC
T ss_pred CCCccHHHHHHHHHh-cCCeEEEEeCCchHHHHHHHHHcCc
Confidence 566789999999988 5899999999999988888877643
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=94.71 E-value=0.0068 Score=60.78 Aligned_cols=67 Identities=15% Similarity=0.018 Sum_probs=51.7
Q ss_pred eCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cC---cEEEe-CCCCc----chhhhcCCHHHHH
Q 003145 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QF---LIQVG-SSINS----LSKEKKRKVHQLF 831 (844)
Q Consensus 764 p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~---~Iavg-na~~~----~a~~~l~~~~~v~ 831 (844)
..+..|+.+++.++++++ ++++.+++||| +.|| |.+ |+ .|++| ++.++ .|.+.+++..++.
T Consensus 144 ~~~kp~~~~~~~~~~~l~------~~~~~~i~iGD-~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~ 216 (233)
T 3s6j_A 144 SYGKPDPDLFLAAAKKIG------APIDECLVIGD-AIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLL 216 (233)
T ss_dssp SCCTTSTHHHHHHHHHTT------CCGGGEEEEES-SHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHH
T ss_pred CCCCCChHHHHHHHHHhC------CCHHHEEEEeC-CHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHH
Confidence 457788999999999999 78999999999 8899 766 55 44455 33332 2567899999999
Q ss_pred HHHHHH
Q 003145 832 GIFLRF 837 (844)
Q Consensus 832 ~~l~~~ 837 (844)
.+|+..
T Consensus 217 ~~l~~~ 222 (233)
T 3s6j_A 217 NHLDEI 222 (233)
T ss_dssp HTGGGT
T ss_pred HHHHHH
Confidence 887654
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=94.59 E-value=0.029 Score=56.08 Aligned_cols=70 Identities=9% Similarity=-0.111 Sum_probs=53.9
Q ss_pred EEEeCCCCHH---HHHHHHHHHhcccCcCCCCCceEEEEeeCCC-ch--hhc--cCcEEEeCCC--------------Cc
Q 003145 761 EVRAVGVTKG---AAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KV--LLT--QFLIQVGSSI--------------NS 818 (844)
Q Consensus 761 EV~p~gvnKG---~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~-nD--Mf~--g~~Iavgna~--------------~~ 818 (844)
|+.....++. .+++. +++++ ++++.+++||| +. || |.+ |++++|.|+. ..
T Consensus 147 ~~~~~KP~~~~~~~~l~~-~~~lg------i~~~~~~~vGD-~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~ 218 (240)
T 3smv_A 147 DVGSYKPNPNNFTYMIDA-LAKAG------IEKKDILHTAE-SLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMP 218 (240)
T ss_dssp HHTSCTTSHHHHHHHHHH-HHHTT------CCGGGEEEEES-CTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCC
T ss_pred ccCCCCCCHHHHHHHHHH-HHhcC------CCchhEEEECC-CchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCC
Confidence 3444556676 56666 88888 78999999999 84 99 666 8999996532 25
Q ss_pred chhhhcCCHHHHHHHHHHHh
Q 003145 819 LSKEKKRKVHQLFGIFLRFS 838 (844)
Q Consensus 819 ~a~~~l~~~~~v~~~l~~~~ 838 (844)
.|.+.+++..++..+|..+.
T Consensus 219 ~ad~v~~~~~el~~~l~~~l 238 (240)
T 3smv_A 219 NVDFRFNSMGEMAEAHKQAL 238 (240)
T ss_dssp CCSEEESSHHHHHHHHHHHH
T ss_pred CCCEEeCCHHHHHHHHHHHh
Confidence 67788999999999998765
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=94.58 E-value=0.011 Score=59.53 Aligned_cols=61 Identities=10% Similarity=-0.087 Sum_probs=42.6
Q ss_pred eCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCc--chhhhcCCHHHHH
Q 003145 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINS--LSKEKKRKVHQLF 831 (844)
Q Consensus 764 p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~--~a~~~l~~~~~v~ 831 (844)
..+..|+.+++.++++++ ++++.+++||| +.|| |.+ |++++|.|+.++ .|.+.+++..++-
T Consensus 143 ~~~Kp~~~~~~~~~~~lg------i~~~~~i~vGD-s~~Di~~a~~aG~~~~~~~~~~~~~~ad~v~~s~~el~ 209 (233)
T 3nas_A 143 AKGKPDPDIFLTAAAMLD------VSPADCAAIED-AEAGISAIKSAGMFAVGVGQGQPMLGADLVVRQTSDLT 209 (233)
T ss_dssp ------CCHHHHHHHHHT------SCGGGEEEEEC-SHHHHHHHHHTTCEEEECC-------CSEECSSGGGCC
T ss_pred CCCCCChHHHHHHHHHcC------CCHHHEEEEeC-CHHHHHHHHHcCCEEEEECCccccccCCEEeCChHhCC
Confidence 345566779999999999 78999999999 8899 666 999999998654 4666677766654
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=94.41 E-value=0.022 Score=63.97 Aligned_cols=58 Identities=12% Similarity=0.129 Sum_probs=39.8
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCC
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~ 649 (844)
...|+++||+||||+...... .-......-..+.+.+.++|++|.+ .|..++|+|+++
T Consensus 56 ~~~k~v~fD~DGTL~~~~~~~--~~~~~~~~~~~~~pgv~e~L~~L~~-~G~~l~IvTN~~ 113 (416)
T 3zvl_A 56 PQGKVAAFDLDGTLITTRSGK--VFPTSPSDWRILYPEIPKKLQELAA-EGYKLVIFTNQM 113 (416)
T ss_dssp CCSSEEEECSBTTTEECSSCS--SSCSSTTCCEESCTTHHHHHHHHHH-TTCEEEEEEECH
T ss_pred CCCeEEEEeCCCCccccCCCc--cCCCCHHHhhhhcccHHHHHHHHHH-CCCeEEEEeCCc
Confidence 357899999999998653100 0000000112367899999999998 599999999976
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=94.25 E-value=0.052 Score=54.12 Aligned_cols=39 Identities=18% Similarity=0.221 Sum_probs=32.8
Q ss_pred CCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC
Q 003145 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (844)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (844)
.+.+.+.++|+.|.+ .|..++|+|+.+...+...+..++
T Consensus 96 ~~~~~~~~~l~~l~~-~g~~~~i~s~~~~~~~~~~l~~~~ 134 (230)
T 3um9_A 96 TPFADVPQALQQLRA-AGLKTAILSNGSRHSIRQVVGNSG 134 (230)
T ss_dssp CBCTTHHHHHHHHHH-TTCEEEEEESSCHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHh-CCCeEEEEeCCCHHHHHHHHHHCC
Confidence 456788999999988 589999999999988888777654
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=94.16 E-value=0.027 Score=61.65 Aligned_cols=54 Identities=13% Similarity=0.138 Sum_probs=40.7
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCC---hhhHHHhhc
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD---RNVLDKNFQ 658 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~---~~~l~~~~~ 658 (844)
++.+.++||+||||.... .+-+...++|+.|.+ .|..++++|+.+ .....+.+.
T Consensus 11 ~~~~~~l~D~DGvl~~g~---------------~~~p~a~~~l~~l~~-~g~~~~~vTNn~~~~~~~~~~~l~ 67 (352)
T 3kc2_A 11 SKKIAFAFDIDGVLFRGK---------------KPIAGASDALKLLNR-NKIPYILLTNGGGFSERARTEFIS 67 (352)
T ss_dssp -CCEEEEECCBTTTEETT---------------EECTTHHHHHHHHHH-TTCCEEEECSCCSSCHHHHHHHHH
T ss_pred ccCCEEEEECCCeeEcCC---------------eeCcCHHHHHHHHHH-CCCEEEEEeCCCCCCchHHHHHHH
Confidence 378999999999999752 234678999999988 599999999654 454444443
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=94.05 E-value=0.0084 Score=61.92 Aligned_cols=70 Identities=6% Similarity=-0.129 Sum_probs=54.2
Q ss_pred EeCCCCHHHHHHHHHHHhcccCcCCCCC-ceEEEEeeCCCch--hhc--c---CcEEEeCC-------------------
Q 003145 763 RAVGVTKGAAIDRILAEIVHSKKMKTAI-DYVLCIGHFLGKV--LLT--Q---FLIQVGSS------------------- 815 (844)
Q Consensus 763 ~p~gvnKG~al~~Ll~~l~~~~~~~~~~-d~vlaiGD~~~nD--Mf~--g---~~Iavgna------------------- 815 (844)
.+.+..|+.+++.+++++| +++ +.+++||| +.|| |.+ | +.|++|..
T Consensus 164 ~~~~kp~~~~~~~~~~~lg------i~~~~~~i~vGD-~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~ 236 (277)
T 3iru_A 164 VVRGRPFPDMALKVALELE------VGHVNGCIKVDD-TLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQS 236 (277)
T ss_dssp SSSCTTSSHHHHHHHHHHT------CSCGGGEEEEES-SHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHcC------CCCCccEEEEcC-CHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhh
Confidence 4567889999999999999 788 99999999 8899 666 4 34555532
Q ss_pred -----CCc----chhhhcCCHHHHHHHHHHHhh
Q 003145 816 -----INS----LSKEKKRKVHQLFGIFLRFSY 839 (844)
Q Consensus 816 -----~~~----~a~~~l~~~~~v~~~l~~~~~ 839 (844)
.++ .|.+.+++..++..+|..+.+
T Consensus 237 ~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~ 269 (277)
T 3iru_A 237 YRQHAEQRLFNAGAHYVIDSVADLETVITDVNR 269 (277)
T ss_dssp HHHHHHHHHHHHTCSEEESSGGGTHHHHHHHHH
T ss_pred hhhhhHHHHhhCCCCEEecCHHHHHHHHHHHHH
Confidence 112 266789999999999987754
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=94.00 E-value=0.77 Score=50.73 Aligned_cols=93 Identities=5% Similarity=-0.038 Sum_probs=61.6
Q ss_pred EEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCC----chhhc--cCCeEEECCC--
Q 003145 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW-- 512 (844)
Q Consensus 441 v~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G----~~~~l--g~~g~lvnP~-- 512 (844)
|. +.+.+++. .+|..||+||..+ | ..+.+|++++| .|+|+.-..+ .+..+ ...|+.+++.
T Consensus 307 v~-~~~~~~~~---~~l~~~d~~v~~~---G-~~t~~Ea~~~G----~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~ 374 (424)
T 2iya_A 307 VE-VHQWVPQL---DILTKASAFITHA---G-MGSTMEALSNA----VPMVAVPQIAEQTMNAERIVELGLGRHIPRDQV 374 (424)
T ss_dssp EE-EESSCCHH---HHHTTCSEEEECC---C-HHHHHHHHHTT----CCEEECCCSHHHHHHHHHHHHTTSEEECCGGGC
T ss_pred eE-EecCCCHH---HHHhhCCEEEECC---c-hhHHHHHHHcC----CCEEEecCccchHHHHHHHHHCCCEEEcCcCCC
Confidence 54 36778765 5799999988643 4 36799999996 6777776542 12223 2357888764
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcC
Q 003145 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 547 (844)
Q Consensus 513 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 547 (844)
+.++++++|.++|+++ +.+++++++.+.+...+
T Consensus 375 ~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~ 407 (424)
T 2iya_A 375 TAEKLREAVLAVASDP--GVAERLAAVRQEIREAG 407 (424)
T ss_dssp CHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSC
T ss_pred CHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHhcC
Confidence 8899999999999864 33444444444444433
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=93.94 E-value=0.016 Score=57.33 Aligned_cols=62 Identities=13% Similarity=0.067 Sum_probs=48.1
Q ss_pred CCCH--HHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeC----CCCcc--hhhhcCCHHHHHHH
Q 003145 766 GVTK--GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGS----SINSL--SKEKKRKVHQLFGI 833 (844)
Q Consensus 766 gvnK--G~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgn----a~~~~--a~~~l~~~~~v~~~ 833 (844)
+.+| +.+++.++++++ ++++.+++||| +.|| |.+ |+++++.+ +.+.+ |.+.+++..++..+
T Consensus 135 ~~~KP~~~~~~~~~~~~~------~~~~~~i~vGD-~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~a~~~~~~~~el~~~ 207 (209)
T 2hdo_A 135 PKRKPDPLPLLTALEKVN------VAPQNALFIGD-SVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILEL 207 (209)
T ss_dssp SCCTTSSHHHHHHHHHTT------CCGGGEEEEES-SHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGGGGG
T ss_pred CCCCCCcHHHHHHHHHcC------CCcccEEEECC-ChhhHHHHHHcCCeEEEEcCCCCChhhhccCCEEeCCHHHHHHh
Confidence 6789 999999999998 78899999999 8999 666 88888755 22222 56677887777654
Q ss_pred H
Q 003145 834 F 834 (844)
Q Consensus 834 l 834 (844)
|
T Consensus 208 l 208 (209)
T 2hdo_A 208 F 208 (209)
T ss_dssp C
T ss_pred h
Confidence 3
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=93.83 E-value=0.027 Score=56.93 Aligned_cols=65 Identities=17% Similarity=0.067 Sum_probs=51.8
Q ss_pred EeCCCCHHHHHHHHHHHhcccCcCCCC-CceEEEEeeCCCch--hhc--cC---cEEEeCCCC-----cchhhhcCCHHH
Q 003145 763 RAVGVTKGAAIDRILAEIVHSKKMKTA-IDYVLCIGHFLGKV--LLT--QF---LIQVGSSIN-----SLSKEKKRKVHQ 829 (844)
Q Consensus 763 ~p~gvnKG~al~~Ll~~l~~~~~~~~~-~d~vlaiGD~~~nD--Mf~--g~---~Iavgna~~-----~~a~~~l~~~~~ 829 (844)
.+.+..|+.+++.++++++ ++ ++.+++||| +.|| |.+ |+ .|++|++.. ..|.+.+++..+
T Consensus 162 ~~~~kp~~~~~~~~~~~~g------~~~~~~~i~vGD-~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~e 234 (240)
T 3sd7_A 162 DGTRVNKNEVIQYVLDLCN------VKDKDKVIMVGD-RKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVES 234 (240)
T ss_dssp TSCCCCHHHHHHHHHHHHT------CCCGGGEEEEES-SHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTT
T ss_pred cCCCCCCHHHHHHHHHHcC------CCCCCcEEEECC-CHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHH
Confidence 3557789999999999999 78 999999999 8899 666 65 666676542 346677889888
Q ss_pred HHHHH
Q 003145 830 LFGIF 834 (844)
Q Consensus 830 v~~~l 834 (844)
+..+|
T Consensus 235 l~~~l 239 (240)
T 3sd7_A 235 IKDIL 239 (240)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88776
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=93.76 E-value=0.054 Score=54.20 Aligned_cols=39 Identities=15% Similarity=0.186 Sum_probs=32.5
Q ss_pred CCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC
Q 003145 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (844)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (844)
.+.+.+.++|+.|.+ .|..++|+|+.+...+...+..++
T Consensus 99 ~~~~~~~~~l~~l~~-~g~~~~i~t~~~~~~~~~~l~~~~ 137 (233)
T 3umb_A 99 SAFPENVPVLRQLRE-MGLPLGILSNGNPQMLEIAVKSAG 137 (233)
T ss_dssp EECTTHHHHHHHHHT-TTCCEEEEESSCHHHHHHHHHTTT
T ss_pred CCCCCHHHHHHHHHh-CCCcEEEEeCCCHHHHHHHHHHCC
Confidence 346778899999987 589999999999988888887754
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=93.70 E-value=0.069 Score=52.16 Aligned_cols=59 Identities=10% Similarity=-0.020 Sum_probs=45.3
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCC-----CcchhhhcCCHHHHHHH
Q 003145 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSI-----NSLSKEKKRKVHQLFGI 833 (844)
Q Consensus 768 nKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~-----~~~a~~~l~~~~~v~~~ 833 (844)
.|+.+++.++++++ ++++.+++||| +.|| |.+ |+++++.+.. ...|.+.+++..++..+
T Consensus 146 p~~~~~~~~~~~~~------~~~~~~~~iGD-~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~~~el~~~ 213 (214)
T 3e58_A 146 PNPEIYLTALKQLN------VQASRALIIED-SEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDSLTDVLDL 213 (214)
T ss_dssp TSSHHHHHHHHHHT------CCGGGEEEEEC-SHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESSGGGGGGG
T ss_pred CChHHHHHHHHHcC------CChHHeEEEec-cHhhHHHHHHCCCEEEEECCCCccchhccHHHHHHHHHHHHhh
Confidence 36677888999998 78999999999 8899 666 8877776642 14567778888777554
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=93.68 E-value=0.049 Score=68.13 Aligned_cols=41 Identities=2% Similarity=0.037 Sum_probs=36.1
Q ss_pred cCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
-++.+++.++|++|.+ .|++|+++||+.........+++++
T Consensus 598 Dplr~~~~~aI~~l~~-aGI~v~miTGD~~~tA~~ia~~lgi 638 (1028)
T 2zxe_A 598 DPPRAAVPDAVGKCRS-AGIKVIMVTGDHPITAKAIAKGVGI 638 (1028)
T ss_dssp CCBCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHHTS
T ss_pred CCCChhHHHHHHHHHH-cCCEEEEECCCCHHHHHHHHHHcCC
Confidence 4678899999999998 5999999999999999988888653
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=93.56 E-value=0.022 Score=55.86 Aligned_cols=17 Identities=12% Similarity=0.270 Sum_probs=14.5
Q ss_pred cCCeEEEEecCCccCCC
Q 003145 589 SNNRLLILGFNATLTEP 605 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~ 605 (844)
+..|+|+||+||||++.
T Consensus 3 ~m~k~i~fDlDGTL~~~ 19 (214)
T 3e58_A 3 AMVEAIIFDMDGVLFDT 19 (214)
T ss_dssp -CCCEEEEESBTTTBCC
T ss_pred ccccEEEEcCCCCcccc
Confidence 35789999999999986
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=93.14 E-value=0.05 Score=55.72 Aligned_cols=67 Identities=4% Similarity=-0.208 Sum_probs=52.6
Q ss_pred CCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCc-EEEeCCCC-----------cchhhhcCCHH
Q 003145 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFL-IQVGSSIN-----------SLSKEKKRKVH 828 (844)
Q Consensus 765 ~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~-Iavgna~~-----------~~a~~~l~~~~ 828 (844)
.+..|+.+++.++++++ ++++.+++||| +.|| |.+ |++ |.|.++.. ..|.+.+++..
T Consensus 166 ~~Kp~~~~~~~~~~~lg------i~~~~~i~iGD-~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~ 238 (259)
T 4eek_A 166 RGKPHPDLYTFAAQQLG------ILPERCVVIED-SVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHA 238 (259)
T ss_dssp CCTTSSHHHHHHHHHTT------CCGGGEEEEES-SHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHH
T ss_pred CCCCChHHHHHHHHHcC------CCHHHEEEEcC-CHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCCHH
Confidence 45667999999999999 78999999999 8899 666 775 55654411 23667899999
Q ss_pred HHHHHHHHHh
Q 003145 829 QLFGIFLRFS 838 (844)
Q Consensus 829 ~v~~~l~~~~ 838 (844)
++..+|....
T Consensus 239 el~~~l~~~~ 248 (259)
T 4eek_A 239 ELRAALAEAG 248 (259)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHhcc
Confidence 9999998653
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=92.78 E-value=0.12 Score=52.71 Aligned_cols=65 Identities=8% Similarity=-0.077 Sum_probs=52.0
Q ss_pred CCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCC---------------------------
Q 003145 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSS--------------------------- 815 (844)
Q Consensus 767 vnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna--------------------------- 815 (844)
-.|..+++.++++++ ++++.+++||| +.|| |.+ |+.+++.+.
T Consensus 147 Kp~~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~ 219 (253)
T 1qq5_A 147 KPHPDSYALVEEVLG------VTPAEVLFVSS-NGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMR 219 (253)
T ss_dssp TTSHHHHHHHHHHHC------CCGGGEEEEES-CHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSS
T ss_pred CCCHHHHHHHHHHcC------CCHHHEEEEeC-ChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccc
Confidence 356678889999998 78899999999 8899 565 888888776
Q ss_pred CC---cchhhhcCCHHHHHHHHHHHh
Q 003145 816 IN---SLSKEKKRKVHQLFGIFLRFS 838 (844)
Q Consensus 816 ~~---~~a~~~l~~~~~v~~~l~~~~ 838 (844)
.+ ..+.+.+++..++..+|..+.
T Consensus 220 ~~~~~~~~~~~~~~~~el~~~l~~~~ 245 (253)
T 1qq5_A 220 EETYAEAPDFVVPALGDLPRLVRGMA 245 (253)
T ss_dssp CCTTSCCCSEEESSGGGHHHHHHHHC
T ss_pred cCCCCCCCCeeeCCHHHHHHHHHHhc
Confidence 11 246678999999999998774
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=92.68 E-value=0.045 Score=53.75 Aligned_cols=60 Identities=8% Similarity=0.040 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEE----eCCCC---cchhhhcCCHHHHHHHHHHH
Q 003145 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQV----GSSIN---SLSKEKKRKVHQLFGIFLRF 837 (844)
Q Consensus 769 KG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iav----gna~~---~~a~~~l~~~~~v~~~l~~~ 837 (844)
|+.++..++++++ ++.+++||| +.+| |.+ |+.+++ +++.+ ..+.+.++++.++..+|..+
T Consensus 130 ~~~~~~~~~~~~~--------~~~~~~vGD-~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~ 200 (201)
T 2w43_A 130 SPKVYKYFLDSIG--------AKEAFLVSS-NAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKELYEWILRY 200 (201)
T ss_dssp CHHHHHHHHHHHT--------CSCCEEEES-CHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESSHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcC--------CCcEEEEeC-CHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECCHHHHHHHHHhc
Confidence 4666677888774 578999999 9899 555 777666 44332 24667899999999888654
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=92.47 E-value=0.15 Score=52.23 Aligned_cols=38 Identities=13% Similarity=0.159 Sum_probs=31.4
Q ss_pred CCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc
Q 003145 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (844)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (844)
.+.+.+.+.|+.|.+ .|..++|+|+.+...+...+..+
T Consensus 111 ~~~~~~~~~l~~l~~-~g~~~~i~tn~~~~~~~~~l~~~ 148 (277)
T 3iru_A 111 QLIPGWKEVFDKLIA-QGIKVGGNTGYGPGMMAPALIAA 148 (277)
T ss_dssp CBCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHH
T ss_pred ccCcCHHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHhc
Confidence 556778899999987 58999999999988887777654
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.27 E-value=0.14 Score=52.83 Aligned_cols=69 Identities=6% Similarity=-0.191 Sum_probs=56.2
Q ss_pred CCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCC-ch--hhc--cCcEEEeCCCCc---------chhhhcCCHHHH
Q 003145 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KV--LLT--QFLIQVGSSINS---------LSKEKKRKVHQL 830 (844)
Q Consensus 765 ~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~-nD--Mf~--g~~Iavgna~~~---------~a~~~l~~~~~v 830 (844)
.+-.+..++..++++++ ++++.+++||| +. +| |.+ |+++++.+.... .|.+.+++..++
T Consensus 159 ~~Kp~~~~~~~~~~~~g------~~~~~~~~vGD-~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el 231 (263)
T 3k1z_A 159 WPKPDPRIFQEALRLAH------MEPVVAAHVGD-NYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHL 231 (263)
T ss_dssp SCTTSHHHHHHHHHHHT------CCGGGEEEEES-CHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGH
T ss_pred CCCCCHHHHHHHHHHcC------CCHHHEEEECC-CcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHH
Confidence 34566788999999998 78999999999 95 99 555 888888886532 467889999999
Q ss_pred HHHHHHHhhc
Q 003145 831 FGIFLRFSYS 840 (844)
Q Consensus 831 ~~~l~~~~~~ 840 (844)
..+|..+..+
T Consensus 232 ~~~l~~~~~~ 241 (263)
T 3k1z_A 232 LPALDCLEGS 241 (263)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhc
Confidence 9999988653
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=92.20 E-value=0.046 Score=53.61 Aligned_cols=41 Identities=2% Similarity=-0.147 Sum_probs=32.5
Q ss_pred HHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCc
Q 003145 771 AAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINS 818 (844)
Q Consensus 771 ~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~ 818 (844)
.++..++++++ ++++.+++||| +.+| |.+ |+..++.++.++
T Consensus 152 ~~~~~~~~~~~------~~~~~~~~vgD-~~~Di~~a~~aG~~~~~~~~~~~ 196 (206)
T 2b0c_A 152 RIYQHVLQAEG------FSPSDTVFFDD-NADNIEGANQLGITSILVKDKTT 196 (206)
T ss_dssp HHHHHHHHHHT------CCGGGEEEEES-CHHHHHHHHTTTCEEEECCSTTH
T ss_pred HHHHHHHHHcC------CCHHHeEEeCC-CHHHHHHHHHcCCeEEEecCCch
Confidence 46778889988 77899999999 8899 555 777777776554
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=92.06 E-value=0.13 Score=51.20 Aligned_cols=40 Identities=10% Similarity=0.126 Sum_probs=33.4
Q ss_pred cCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC
Q 003145 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (844)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (844)
..+.+.+.+.|+.|.+ .|..++|+|+.+...+...+..++
T Consensus 90 ~~~~~~~~~~l~~l~~-~g~~~~i~s~~~~~~~~~~l~~~~ 129 (233)
T 3s6j_A 90 IIALPGAVELLETLDK-ENLKWCIATSGGIDTATINLKALK 129 (233)
T ss_dssp CEECTTHHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHTTT
T ss_pred CccCCCHHHHHHHHHH-CCCeEEEEeCCchhhHHHHHHhcc
Confidence 3556778899999987 589999999999998888887764
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=91.97 E-value=0.15 Score=52.08 Aligned_cols=15 Identities=13% Similarity=0.173 Sum_probs=13.4
Q ss_pred CeEEEEecCCccCCC
Q 003145 591 NRLLILGFNATLTEP 605 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~ 605 (844)
.|+|+||+||||++.
T Consensus 2 ~k~viFDlDGTL~d~ 16 (253)
T 1qq5_A 2 IKAVVFDAYGTLFDV 16 (253)
T ss_dssp CCEEEECTBTTTBCT
T ss_pred CcEEEEeCCCCCCcc
Confidence 478999999999986
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.66 E-value=0.019 Score=58.69 Aligned_cols=69 Identities=4% Similarity=-0.039 Sum_probs=51.9
Q ss_pred eCCCCHHHHHHHHHHHhcccCcCCCCC--ceEEEEeeCCCch--hhc--c---CcEEEeCCCC---cchhhhcCCHHHHH
Q 003145 764 AVGVTKGAAIDRILAEIVHSKKMKTAI--DYVLCIGHFLGKV--LLT--Q---FLIQVGSSIN---SLSKEKKRKVHQLF 831 (844)
Q Consensus 764 p~gvnKG~al~~Ll~~l~~~~~~~~~~--d~vlaiGD~~~nD--Mf~--g---~~Iavgna~~---~~a~~~l~~~~~v~ 831 (844)
..+-.|..+++.++++++ +++ +.+++||| +.|| |.+ | +.|.+|++.+ ..|.+.+++..++.
T Consensus 168 ~~~Kp~~~~~~~~~~~lg------i~~~~~~~i~iGD-~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~sl~el~ 240 (250)
T 3l5k_A 168 QHGKPDPDIFLACAKRFS------PPPAMEKCLVFED-APNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQ 240 (250)
T ss_dssp CSCTTSTHHHHHHHHTSS------SCCCGGGEEEEES-SHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSCGGGCC
T ss_pred cCCCCChHHHHHHHHHcC------CCCCcceEEEEeC-CHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecCHHHhh
Confidence 345667889999999998 666 99999999 8899 666 5 3444577543 46677899999887
Q ss_pred HHHHHHhh
Q 003145 832 GIFLRFSY 839 (844)
Q Consensus 832 ~~l~~~~~ 839 (844)
..|..|..
T Consensus 241 ~~l~~l~~ 248 (250)
T 3l5k_A 241 PELFGLPS 248 (250)
T ss_dssp GGGGTCCC
T ss_pred HHHhcCCC
Confidence 77665543
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=91.54 E-value=0.22 Score=49.22 Aligned_cols=38 Identities=8% Similarity=0.222 Sum_probs=28.9
Q ss_pred CCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc
Q 003145 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (844)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (844)
.+.|.+.++|+.|.+ .|.+++|+|+.+...+...+..+
T Consensus 84 ~~~pg~~~~l~~L~~-~g~~~~i~tn~~~~~~~~~l~~~ 121 (216)
T 3kbb_A 84 KENPGVREALEFVKS-KRIKLALATSTPQREALERLRRL 121 (216)
T ss_dssp CBCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHT
T ss_pred ccCccHHHHHHHHHH-cCCCcccccCCcHHHHHHHHHhc
Confidence 456677888888877 58888888888887777666654
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=91.19 E-value=0.48 Score=52.41 Aligned_cols=84 Identities=10% Similarity=-0.014 Sum_probs=55.8
Q ss_pred EEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCC----chhhc--cCCeEEECC--C
Q 003145 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNP--W 512 (844)
Q Consensus 441 v~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G----~~~~l--g~~g~lvnP--~ 512 (844)
+. +.+.+++.+ +|..||+||. +-|. .+..|++++| .|+|+--..+ .+..+ ...|+.+++ .
T Consensus 288 v~-~~~~~~~~~---ll~~~d~~v~---~~G~-~t~~Ea~~~G----~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~ 355 (416)
T 1rrv_A 288 CF-AIDEVNFQA---LFRRVAAVIH---HGSA-GTEHVATRAG----VPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTP 355 (416)
T ss_dssp EE-EESSCCHHH---HGGGSSEEEE---CCCH-HHHHHHHHHT----CCEEECCCSBTHHHHHHHHHHHTSEEECSSSCC
T ss_pred EE-EeccCChHH---HhccCCEEEe---cCCh-hHHHHHHHcC----CCEEEccCCCCcHHHHHHHHHCCCccCCCCCCC
Confidence 44 467788654 6799999997 4454 4899999996 6777654432 22233 235777765 5
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 003145 513 NITEVANAIARALNMSPEEREKRHWHN 539 (844)
Q Consensus 513 d~~~~A~ai~~aL~m~~~er~~r~~~~ 539 (844)
+.++++++|.++ .+ + +.++++++.
T Consensus 356 ~~~~l~~~i~~l-~~-~-~~~~~~~~~ 379 (416)
T 1rrv_A 356 TFESLSAALTTV-LA-P-ETRARAEAV 379 (416)
T ss_dssp CHHHHHHHHHHH-TS-H-HHHHHHHHH
T ss_pred CHHHHHHHHHHh-hC-H-HHHHHHHHH
Confidence 789999999999 64 3 333344433
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=91.01 E-value=0.31 Score=53.19 Aligned_cols=88 Identities=11% Similarity=0.025 Sum_probs=54.5
Q ss_pred eCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCC----chhhc-c-CCeEEECCCCHHHH
Q 003145 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL-G-AGAILVNPWNITEV 517 (844)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G----~~~~l-g-~~g~lvnP~d~~~~ 517 (844)
+.+.+++.+ ++..||+||. +-|+| +..|++++| .|+|+--+.+ .+..+ . ..|+.+++. +.+
T Consensus 292 ~~~~~p~~~---lL~~~~~~v~---h~G~~-s~~Eal~~G----vP~v~~P~~~dQ~~na~~v~~~G~g~~l~~~--~~~ 358 (400)
T 4amg_A 292 VVEWIPLGA---LLETCDAIIH---HGGSG-TLLTALAAG----VPQCVIPHGSYQDTNRDVLTGLGIGFDAEAG--SLG 358 (400)
T ss_dssp EECCCCHHH---HHTTCSEEEE---CCCHH-HHHHHHHHT----CCEEECCC---CHHHHHHHHHHTSEEECCTT--TCS
T ss_pred EEeecCHHH---Hhhhhhheec---cCCcc-HHHHHHHhC----CCEEEecCcccHHHHHHHHHHCCCEEEcCCC--Cch
Confidence 467778665 5688999884 34555 678999995 6777644433 23333 1 246666654 447
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Q 003145 518 ANAIARALNMSPEEREKRHWHNFTHVTTH 546 (844)
Q Consensus 518 A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 546 (844)
+++|.++|+++ +.+++.+++.+.+...
T Consensus 359 ~~al~~lL~d~--~~r~~a~~l~~~~~~~ 385 (400)
T 4amg_A 359 AEQCRRLLDDA--GLREAALRVRQEMSEM 385 (400)
T ss_dssp HHHHHHHHHCH--HHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHcCH--HHHHHHHHHHHHHHcC
Confidence 89999999865 3444555555555444
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=90.64 E-value=0.12 Score=52.48 Aligned_cols=65 Identities=9% Similarity=-0.064 Sum_probs=49.1
Q ss_pred eCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCc---EEEeCCC-Cc----chhhhcCCHHHHH
Q 003145 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFL---IQVGSSI-NS----LSKEKKRKVHQLF 831 (844)
Q Consensus 764 p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~---Iavgna~-~~----~a~~~l~~~~~v~ 831 (844)
+.+..|+.++..++++++ ++++.+++||| +.|| |.+ |+. |.+|++. +. .|.+.++++.++.
T Consensus 162 ~~~Kp~p~~~~~~~~~l~------~~~~~~~~vGD-s~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~~~~el~ 234 (240)
T 2hi0_A 162 IRRKPAPDMTSECVKVLG------VPRDKCVYIGD-SEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKLE 234 (240)
T ss_dssp SCCTTSSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEECSHHHHH
T ss_pred CCCCCCHHHHHHHHHHcC------CCHHHeEEEcC-CHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEECCHHHHH
Confidence 457789999999999999 78999999999 8899 555 552 4455433 22 3556789999988
Q ss_pred HHHH
Q 003145 832 GIFL 835 (844)
Q Consensus 832 ~~l~ 835 (844)
.+|.
T Consensus 235 ~~l~ 238 (240)
T 2hi0_A 235 EAIL 238 (240)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 7663
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.54 E-value=0.18 Score=50.19 Aligned_cols=72 Identities=14% Similarity=0.175 Sum_probs=51.6
Q ss_pred hcCCeEEEEecCCccCCCCCCCCCCCcc---------ccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhc
Q 003145 588 RSNNRLLILGFNATLTEPVDTPGRRGDQ---------IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (844)
Q Consensus 588 ~sk~rLi~lD~DGTL~~~~~~p~~~~~~---------~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 658 (844)
..++++++||+||||+.....|....+. .......+-|.+.+.|+.|.+ ...++|+|..+...++..+.
T Consensus 25 ~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~--~~~i~I~Tss~~~~a~~vl~ 102 (195)
T 2hhl_A 25 DYGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQ--LFECVLFTASLAKYADPVAD 102 (195)
T ss_dssp GTTCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHH--HSEEEEECSSCHHHHHHHHH
T ss_pred cCCCeEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHHHc--CCeEEEEcCCCHHHHHHHHH
Confidence 4578899999999999764333211100 000112345789999999987 39999999999999998888
Q ss_pred ccC
Q 003145 659 EYN 661 (844)
Q Consensus 659 ~l~ 661 (844)
.++
T Consensus 103 ~ld 105 (195)
T 2hhl_A 103 LLD 105 (195)
T ss_dssp HHC
T ss_pred HhC
Confidence 774
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=90.52 E-value=0.22 Score=50.31 Aligned_cols=68 Identities=12% Similarity=0.067 Sum_probs=50.4
Q ss_pred CCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCC-ch--hhc--cCcEE-E--eCCCC-c-----chhhhcCCHHHH
Q 003145 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KV--LLT--QFLIQ-V--GSSIN-S-----LSKEKKRKVHQL 830 (844)
Q Consensus 765 ~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~-nD--Mf~--g~~Ia-v--gna~~-~-----~a~~~l~~~~~v 830 (844)
.+-.|..+++.++++++ ++++.+++||| +. || |.+ |+.++ + |+..+ . .+.+.+++..++
T Consensus 148 ~~Kp~~~~~~~~~~~~g------~~~~~~i~iGD-~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~~~~el 220 (241)
T 2hoq_A 148 VKKPHPKIFKKALKAFN------VKPEEALMVGD-RLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESL 220 (241)
T ss_dssp CCTTCHHHHHHHHHHHT------CCGGGEEEEES-CTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEESSTTHH
T ss_pred CCCCCHHHHHHHHHHcC------CCcccEEEECC-CchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEECCHHHH
Confidence 45567899999999999 78899999999 86 99 666 65433 3 43321 1 456679999999
Q ss_pred HHHHHHHhh
Q 003145 831 FGIFLRFSY 839 (844)
Q Consensus 831 ~~~l~~~~~ 839 (844)
..+|..+..
T Consensus 221 ~~~l~~~~~ 229 (241)
T 2hoq_A 221 LEVLARESS 229 (241)
T ss_dssp HHHHHHCCS
T ss_pred HHHHHHHhh
Confidence 998876543
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=90.32 E-value=0.15 Score=51.11 Aligned_cols=64 Identities=6% Similarity=-0.082 Sum_probs=49.5
Q ss_pred CCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCc-EEEeCC--CC--cchhhhcCCHHHHHHHHHHH
Q 003145 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFL-IQVGSS--IN--SLSKEKKRKVHQLFGIFLRF 837 (844)
Q Consensus 767 vnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~-Iavgna--~~--~~a~~~l~~~~~v~~~l~~~ 837 (844)
-.|+.++..++++++ ++++.+++||| +.+| |.+ |+. |.|.++ .+ ..+.+.+++..++..+|..+
T Consensus 139 Kp~~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~el~~~l~~~ 211 (222)
T 2nyv_A 139 KPSPTPVLKTLEILG------EEPEKALIVGD-TDADIEAGKRAGTKTALALWGYVKLNSQIPDFTLSRPSDLVKLMDNH 211 (222)
T ss_dssp CCTTHHHHHHHHHHT------CCGGGEEEEES-SHHHHHHHHHHTCEEEEETTSSCSCCCCCCSEEESSTTHHHHHHHTT
T ss_pred CCChHHHHHHHHHhC------CCchhEEEECC-CHHHHHHHHHCCCeEEEEcCCCCCccccCCCEEECCHHHHHHHHHHh
Confidence 378999999999998 78899999999 8999 555 665 555543 22 34667899999998887654
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=90.25 E-value=0.22 Score=49.67 Aligned_cols=66 Identities=12% Similarity=0.063 Sum_probs=49.8
Q ss_pred CCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCC-ch--hhc--cC-cEEEeCC--C---CcchhhhcCCHHHHHHH
Q 003145 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KV--LLT--QF-LIQVGSS--I---NSLSKEKKRKVHQLFGI 833 (844)
Q Consensus 765 ~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~-nD--Mf~--g~-~Iavgna--~---~~~a~~~l~~~~~v~~~ 833 (844)
.+..|+.+++.+++++|. ++++.+++||| +. || |.+ |+ +|.|+++ . ...|.+.+++..++..+
T Consensus 156 ~~kp~~~~~~~~~~~~g~-----~~~~~~i~vGD-~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~ 229 (238)
T 3ed5_A 156 FQKPMKEYFNYVFERIPQ-----FSAEHTLIIGD-SLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHI 229 (238)
T ss_dssp SCTTCHHHHHHHHHTSTT-----CCGGGEEEEES-CTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHH
T ss_pred CCCCChHHHHHHHHHcCC-----CChhHeEEECC-CcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHH
Confidence 456779999999999861 36899999999 86 99 666 66 3445443 2 23577789999999988
Q ss_pred HHH
Q 003145 834 FLR 836 (844)
Q Consensus 834 l~~ 836 (844)
|..
T Consensus 230 l~~ 232 (238)
T 3ed5_A 230 LNI 232 (238)
T ss_dssp HTC
T ss_pred HHh
Confidence 864
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=90.02 E-value=0.24 Score=48.68 Aligned_cols=42 Identities=10% Similarity=-0.055 Sum_probs=34.3
Q ss_pred HHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcc
Q 003145 771 AAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSL 819 (844)
Q Consensus 771 ~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~ 819 (844)
.+++.++++++ ++++.+++||| +.+| |.+ |+++++.|+.+++
T Consensus 154 ~~~~~~~~~~~------~~~~~~~~igD-~~~Di~~a~~aG~~~~~~~~~~~~ 199 (211)
T 2i6x_A 154 DIFLEMIADSG------MKPEETLFIDD-GPANVATAERLGFHTYCPDNGENW 199 (211)
T ss_dssp HHHHHHHHHHC------CCGGGEEEECS-CHHHHHHHHHTTCEEECCCTTCCC
T ss_pred HHHHHHHHHhC------CChHHeEEeCC-CHHHHHHHHHcCCEEEEECCHHHH
Confidence 45568888888 78899999999 9999 565 8889999886654
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=89.96 E-value=0.19 Score=61.69 Aligned_cols=69 Identities=10% Similarity=0.063 Sum_probs=50.6
Q ss_pred HHHHHHhcCCeEEEEecCC-----ccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHh
Q 003145 582 SIERYLRSNNRLLILGFNA-----TLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 656 (844)
Q Consensus 582 ~~~~y~~sk~rLi~lD~DG-----TL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~ 656 (844)
..+.|.....|.+++=++. +++.... ..-+|-+++.+++++|.+ .|+.|+++||.........
T Consensus 501 ~~~~~a~~G~RvL~vA~~~~e~~l~~lGli~-----------i~Dp~R~ea~~aI~~l~~-aGI~v~MiTGD~~~TA~aI 568 (920)
T 1mhs_A 501 KVAEFATRGFRSLGVARKRGEGSWEILGIMP-----------CMDPPRHDTYKTVCEAKT-LGLSIKMLTGDAVGIARET 568 (920)
T ss_dssp HHHHHHTSSCCCCEECCCSSSCSCCCCBBCC-----------CCCCCCHHHHHHHHHHHH-HTCEEEEEESSCHHHHHHH
T ss_pred HHHHHHhCCCEEEEEEEeccccccEEEEEEE-----------EeccccccHHHHHHHHhh-cCceEEEEcCCCHHHHHHH
Confidence 3445666667777776543 4443221 223477999999999987 5999999999999999999
Q ss_pred hcccCc
Q 003145 657 FQEYNL 662 (844)
Q Consensus 657 ~~~l~l 662 (844)
.+++++
T Consensus 569 A~~lGI 574 (920)
T 1mhs_A 569 SRQLGL 574 (920)
T ss_dssp HHHHTS
T ss_pred HHHcCC
Confidence 888765
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=89.82 E-value=0.23 Score=48.77 Aligned_cols=71 Identities=15% Similarity=0.188 Sum_probs=51.1
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccc---------cccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcc
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQI---------REMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~---------~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 659 (844)
.+++++++|+|+||+.....|....+.. ......+-|.+.+.|++|.+ ...++|.|..+...++..+..
T Consensus 13 ~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~--~~~i~I~T~~~~~~a~~vl~~ 90 (181)
T 2ght_A 13 SDKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGE--LFECVLFTASLAKYADPVADL 90 (181)
T ss_dssp TTSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHH--HSEEEEECSSCHHHHHHHHHH
T ss_pred CCCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHh--CCCEEEEcCCCHHHHHHHHHH
Confidence 4678999999999997654332111100 01123456789999999987 499999999999999988887
Q ss_pred cC
Q 003145 660 YN 661 (844)
Q Consensus 660 l~ 661 (844)
++
T Consensus 91 ld 92 (181)
T 2ght_A 91 LD 92 (181)
T ss_dssp HC
T ss_pred HC
Confidence 64
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=89.15 E-value=0.39 Score=47.05 Aligned_cols=68 Identities=13% Similarity=0.048 Sum_probs=47.7
Q ss_pred eCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcch---hh--hcCCHHHHHHHH
Q 003145 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSLS---KE--KKRKVHQLFGIF 834 (844)
Q Consensus 764 p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~a---~~--~l~~~~~v~~~l 834 (844)
|+...|..+++++. .+++.+++||| +.+| |.+ |+++++. +.+.+. .+ .+++..++..+|
T Consensus 129 p~p~~~~~~l~~l~----------~~~~~~~~iGD-~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l 196 (206)
T 1rku_A 129 RQKDPKRQSVIAFK----------SLYYRVIAAGD-SYNDTTMLSEAHAGILFH-APENVIREFPQFPAVHTYEDLKREF 196 (206)
T ss_dssp CSSSHHHHHHHHHH----------HTTCEEEEEEC-SSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEECSHHHHHHHH
T ss_pred CCCchHHHHHHHHH----------hcCCEEEEEeC-ChhhHHHHHhcCccEEEC-CcHHHHHHHhhhccccchHHHHHHH
Confidence 44456777776653 23678999999 8899 666 7788874 333322 22 278999999999
Q ss_pred HHHhhccCC
Q 003145 835 LRFSYSGVQ 843 (844)
Q Consensus 835 ~~~~~~~~~ 843 (844)
..+...|++
T Consensus 197 ~~~~~~~~~ 205 (206)
T 1rku_A 197 LKASSRSLS 205 (206)
T ss_dssp HHHCSSCCC
T ss_pred HHHhccccC
Confidence 998877664
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=88.84 E-value=0.22 Score=48.89 Aligned_cols=14 Identities=14% Similarity=0.233 Sum_probs=12.7
Q ss_pred CeEEEEecCCccCC
Q 003145 591 NRLLILGFNATLTE 604 (844)
Q Consensus 591 ~rLi~lD~DGTL~~ 604 (844)
.|+++||+||||++
T Consensus 2 ~k~viFD~DGTL~d 15 (206)
T 1rku_A 2 MEIACLDLEGVLVP 15 (206)
T ss_dssp CEEEEEESBTTTBC
T ss_pred CcEEEEccCCcchh
Confidence 57899999999996
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=88.47 E-value=0.57 Score=46.76 Aligned_cols=45 Identities=4% Similarity=-0.097 Sum_probs=35.9
Q ss_pred HHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcchh
Q 003145 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSLSK 821 (844)
Q Consensus 770 G~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~a~ 821 (844)
..+++.++++++ ++++.+++||| +.+| |.+ |+.+++.++.+++.+
T Consensus 176 ~~~~~~~~~~~g------~~~~~~~~vGD-~~~Di~~a~~aG~~~i~v~~~~~~k~ 224 (229)
T 4dcc_A 176 PEIFKAVTEDAG------IDPKETFFIDD-SEINCKVAQELGISTYTPKAGEDWSH 224 (229)
T ss_dssp HHHHHHHHHHHT------CCGGGEEEECS-CHHHHHHHHHTTCEEECCCTTCCGGG
T ss_pred HHHHHHHHHHcC------CCHHHeEEECC-CHHHHHHHHHcCCEEEEECCHHHHHH
Confidence 355778889988 78999999999 8899 455 888888888766543
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=88.35 E-value=0.12 Score=49.95 Aligned_cols=45 Identities=11% Similarity=-0.104 Sum_probs=36.4
Q ss_pred eCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCC
Q 003145 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSIN 817 (844)
Q Consensus 764 p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~ 817 (844)
..+..|+.+++.++++++ ++ .+++||| +.|| |.+ |+++++.+...
T Consensus 134 ~~~kp~~~~~~~~~~~~~------~~--~~~~iGD-~~~Di~~a~~aG~~~~~~~~~~ 182 (190)
T 2fi1_A 134 FKRKPNPESMLYLREKYQ------IS--SGLVIGD-RPIDIEAGQAAGLDTHLFTSIV 182 (190)
T ss_dssp CCCTTSCHHHHHHHHHTT------CS--SEEEEES-SHHHHHHHHHTTCEEEECSCHH
T ss_pred CCCCCCHHHHHHHHHHcC------CC--eEEEEcC-CHHHHHHHHHcCCeEEEECCCC
Confidence 346678999999999998 55 8999999 8899 776 78777776543
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=88.30 E-value=0.31 Score=49.34 Aligned_cols=61 Identities=13% Similarity=0.145 Sum_probs=40.9
Q ss_pred CCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCc-----chhhhcCCHHHHHHHHHH
Q 003145 766 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINS-----LSKEKKRKVHQLFGIFLR 836 (844)
Q Consensus 766 gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~-----~a~~~l~~~~~v~~~l~~ 836 (844)
+..|..++++ ++ .+++.++++|| +.+| +.+ |+.++.+...+. .+.+.+++..++..+|..
T Consensus 149 ~~~K~~~~~~----~~------~~~~~~~~vGD-s~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~ 217 (236)
T 2fea_A 149 GCCKPSVIHE----LS------EPNQYIIMIGD-SVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKEIEN 217 (236)
T ss_dssp SSCHHHHHHH----HC------CTTCEEEEEEC-CGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHHHHT
T ss_pred CCcHHHHHHH----Hh------ccCCeEEEEeC-ChHHHHHHHhCCeeeechHHHHHHHHCCCCeeecCCHHHHHHHHHH
Confidence 6678877654 45 56899999999 8999 444 444433221111 145678899999888876
Q ss_pred H
Q 003145 837 F 837 (844)
Q Consensus 837 ~ 837 (844)
+
T Consensus 218 ~ 218 (236)
T 2fea_A 218 V 218 (236)
T ss_dssp S
T ss_pred h
Confidence 4
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=88.00 E-value=0.53 Score=45.89 Aligned_cols=14 Identities=14% Similarity=0.237 Sum_probs=12.8
Q ss_pred eEEEEecCCccCCC
Q 003145 592 RLLILGFNATLTEP 605 (844)
Q Consensus 592 rLi~lD~DGTL~~~ 605 (844)
|+|+||+||||++.
T Consensus 2 k~iiFDlDGTL~d~ 15 (201)
T 2w43_A 2 IILAFDIFGTVLDT 15 (201)
T ss_dssp CEEEECCBTTTEEG
T ss_pred cEEEEeCCCceecc
Confidence 68999999999986
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=87.95 E-value=0.22 Score=50.93 Aligned_cols=30 Identities=7% Similarity=0.000 Sum_probs=22.0
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCcccccccc-CCChhHHHHHHH
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMEL-KLHPDLKQPLNA 633 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~-~~~~~~~~~L~~ 633 (844)
+.|+|+||+||||++.. . .+.+.+.+++++
T Consensus 5 ~ik~i~fDlDGTLld~~--------------~~~~~~~~~~~l~~ 35 (267)
T 1swv_A 5 KIEAVIFAWAGTTVDYG--------------CFAPLEVFMEIFHK 35 (267)
T ss_dssp CCCEEEECSBTTTBSTT--------------CCTTHHHHHHHHHT
T ss_pred CceEEEEecCCCEEeCC--------------CccHHHHHHHHHHH
Confidence 46899999999999863 2 245666666665
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=87.71 E-value=0.13 Score=49.71 Aligned_cols=30 Identities=10% Similarity=0.271 Sum_probs=22.5
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHh
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 634 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L 634 (844)
.|+|+||+||||++.. ..+.+.+.++++++
T Consensus 4 ~k~i~fDlDGTL~~~~--------------~~~~~~~~~~~~~~ 33 (207)
T 2go7_A 4 KTAFIWDLDGTLLDSY--------------EAILSGIEETFAQF 33 (207)
T ss_dssp CCEEEECTBTTTEECH--------------HHHHHHHHHHHHHH
T ss_pred ccEEEEeCCCcccccH--------------HHHHHHHHHHHHHc
Confidence 5899999999999762 33456677777765
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=87.39 E-value=0.18 Score=50.04 Aligned_cols=16 Identities=19% Similarity=0.395 Sum_probs=14.3
Q ss_pred CCeEEEEecCCccCCC
Q 003145 590 NNRLLILGFNATLTEP 605 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~ 605 (844)
..|+|+||+||||++.
T Consensus 3 ~ik~i~fDlDGTL~d~ 18 (229)
T 2fdr_A 3 GFDLIIFDCDGVLVDS 18 (229)
T ss_dssp CCSEEEECSBTTTBCC
T ss_pred CccEEEEcCCCCcCcc
Confidence 4689999999999987
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=86.52 E-value=0.22 Score=50.28 Aligned_cols=32 Identities=6% Similarity=0.116 Sum_probs=23.0
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHh
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 634 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L 634 (844)
.+.|+|+||+||||++.. ..+.+...++++++
T Consensus 22 ~~~k~i~fDlDGTL~d~~--------------~~~~~~~~~~~~~~ 53 (243)
T 3qxg_A 22 KKLKAVLFDMDGVLFNSM--------------PYHSEAWHQVMKTH 53 (243)
T ss_dssp CCCCEEEECSBTTTBCCH--------------HHHHHHHHHHHHHT
T ss_pred ccCCEEEEcCCCCCCCCH--------------HHHHHHHHHHHHHh
Confidence 357999999999999862 23445666666654
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=86.10 E-value=0.18 Score=50.31 Aligned_cols=15 Identities=13% Similarity=0.428 Sum_probs=13.7
Q ss_pred CeEEEEecCCccCCC
Q 003145 591 NRLLILGFNATLTEP 605 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~ 605 (844)
.|+|+||+||||++.
T Consensus 2 ik~i~fDlDGTL~d~ 16 (233)
T 3nas_A 2 LKAVIFDLDGVITDT 16 (233)
T ss_dssp CCEEEECSBTTTBCH
T ss_pred CcEEEECCCCCcCCC
Confidence 589999999999986
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=86.03 E-value=0.25 Score=49.55 Aligned_cols=31 Identities=3% Similarity=0.193 Sum_probs=22.5
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHh
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 634 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L 634 (844)
+.|+|+||+||||++.. ..+.+...++++++
T Consensus 22 ~~k~i~fDlDGTL~d~~--------------~~~~~~~~~~~~~~ 52 (247)
T 3dv9_A 22 DLKAVLFDMDGVLFDSM--------------PNHAESWHKIMKRF 52 (247)
T ss_dssp CCCEEEEESBTTTBCCH--------------HHHHHHHHHHHHHT
T ss_pred CCCEEEECCCCccCcCH--------------HHHHHHHHHHHHHc
Confidence 47899999999999862 23445566666664
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=85.85 E-value=0.2 Score=49.99 Aligned_cols=31 Identities=13% Similarity=0.116 Sum_probs=22.2
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHh
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 634 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L 634 (844)
+.|+|+||+||||++.. ..+.+.+.++++++
T Consensus 6 ~~k~i~fDlDGTL~d~~--------------~~~~~~~~~~~~~~ 36 (238)
T 3ed5_A 6 RYRTLLFDVDDTILDFQ--------------AAEALALRLLFEDQ 36 (238)
T ss_dssp CCCEEEECCBTTTBCHH--------------HHHHHHHHHHHHHT
T ss_pred cCCEEEEcCcCcCcCCc--------------hhHHHHHHHHHHHc
Confidence 57899999999999862 23445566666664
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=85.77 E-value=0.2 Score=50.42 Aligned_cols=32 Identities=9% Similarity=0.017 Sum_probs=23.4
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHh
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 634 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L 634 (844)
.+.|+|+||+||||++.. ..+.+.+.++++++
T Consensus 13 ~~~k~i~fDlDGTL~d~~--------------~~~~~~~~~~~~~~ 44 (254)
T 3umg_A 13 RNVRAVLFDTFGTVVDWR--------------TGIATAVADYAARH 44 (254)
T ss_dssp SBCCEEEECCBTTTBCHH--------------HHHHHHHHHHHHHT
T ss_pred CCceEEEEeCCCceecCc--------------hHHHHHHHHHHHHh
Confidence 357899999999999862 33456667777665
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=85.29 E-value=0.8 Score=48.18 Aligned_cols=67 Identities=16% Similarity=0.138 Sum_probs=44.8
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhh---HHHhhcc
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV---LDKNFQE 659 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~---l~~~~~~ 659 (844)
..+.+++|.|||+......-. ..-..-....+-+.+.++|+.|.+ .|..++|+|||+... +..+++.
T Consensus 158 ~~~~i~iD~dgtl~~~~~~~~--~~~~~~~~~~~~~g~~e~L~~L~~-~g~~~~v~T~k~~~~~~~~~~~l~~ 227 (301)
T 1ltq_A 158 KPKAVIFDVDGTLAKMNGRGP--YDLEKCDTDVINPMVVELSKMYAL-MGYQIVVVSGRESGTKEDPTKYYRM 227 (301)
T ss_dssp SCEEEEEETBTTTBCCSSCCT--TCGGGGGGCCBCHHHHHHHHHHHH-TTCEEEEEECSCCCCSSSTTHHHHH
T ss_pred ccceEEEeCCCCcccccCCCc--hhhhhccccCCChHHHHHHHHHHH-CCCeEEEEeCCCcccchhHHHHHHh
Confidence 347888999999987542110 000011234567899999999998 599999999998543 3444444
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=85.26 E-value=0.16 Score=51.29 Aligned_cols=31 Identities=16% Similarity=0.155 Sum_probs=23.1
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHh
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 634 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L 634 (844)
+.|+|+||+||||++. ...+.+.+.++++++
T Consensus 21 ~ik~i~fDlDGTL~d~--------------~~~~~~~~~~~~~~~ 51 (254)
T 3umc_A 21 GMRAILFDVFGTLVDW--------------RSSLIEQFQALEREL 51 (254)
T ss_dssp SCCEEEECCBTTTEEH--------------HHHHHHHHHHHHHHS
T ss_pred CCcEEEEeCCCccEec--------------CccHHHHHHHHHHHh
Confidence 4789999999999976 233456677777665
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=84.95 E-value=0.24 Score=50.20 Aligned_cols=32 Identities=13% Similarity=0.073 Sum_probs=23.1
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHh
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 634 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L 634 (844)
...|+|+||+||||++.. ..+.+...++++++
T Consensus 28 ~~ik~i~fDlDGTL~d~~--------------~~~~~~~~~~~~~~ 59 (250)
T 3l5k_A 28 QPVTHLIFDMDGLLLDTE--------------RLYSVVFQEICNRY 59 (250)
T ss_dssp CCCSEEEEETBTTTBCHH--------------HHHHHHHHHHHHHT
T ss_pred cCCcEEEEcCCCCcCCCH--------------HHHHHHHHHHHHHh
Confidence 457999999999999762 23445666666664
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=84.46 E-value=0.24 Score=49.25 Aligned_cols=16 Identities=13% Similarity=0.171 Sum_probs=14.5
Q ss_pred CCeEEEEecCCccCCC
Q 003145 590 NNRLLILGFNATLTEP 605 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~ 605 (844)
+.|+|+||+||||++.
T Consensus 4 ~~k~i~fDlDGTL~d~ 19 (240)
T 3qnm_A 4 KYKNLFFDLDDTIWAF 19 (240)
T ss_dssp CCSEEEECCBTTTBCH
T ss_pred CceEEEEcCCCCCcCc
Confidence 5789999999999986
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=84.27 E-value=0.54 Score=45.99 Aligned_cols=16 Identities=13% Similarity=0.191 Sum_probs=14.1
Q ss_pred CCeEEEEecCCccCCC
Q 003145 590 NNRLLILGFNATLTEP 605 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~ 605 (844)
..|+|+||+||||++.
T Consensus 4 m~k~iiFDlDGTL~d~ 19 (211)
T 2i6x_A 4 MIRNIVFDLGGVLIHL 19 (211)
T ss_dssp CCSEEEECSBTTTEEE
T ss_pred cceEEEEeCCCeeEec
Confidence 4689999999999976
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=83.58 E-value=0.29 Score=49.91 Aligned_cols=16 Identities=13% Similarity=0.291 Sum_probs=14.6
Q ss_pred CCeEEEEecCCccCCC
Q 003145 590 NNRLLILGFNATLTEP 605 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~ 605 (844)
..|+|+||+||||++.
T Consensus 27 ~ik~i~fDlDGTL~d~ 42 (259)
T 4eek_A 27 PFDAVLFDLDGVLVES 42 (259)
T ss_dssp CCSEEEEESBTTTEEC
T ss_pred CCCEEEECCCCCcccC
Confidence 6799999999999976
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=82.98 E-value=0.43 Score=45.78 Aligned_cols=31 Identities=13% Similarity=0.085 Sum_probs=22.0
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHh
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 634 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L 634 (844)
+.|+|+||+||||++.. ..+.+...++++++
T Consensus 5 ~~k~i~fDlDGTL~d~~--------------~~~~~~~~~~~~~~ 35 (190)
T 2fi1_A 5 KYHDYIWDLGGTLLDNY--------------ETSTAAFVETLALY 35 (190)
T ss_dssp CCSEEEECTBTTTBCHH--------------HHHHHHHHHHHHHT
T ss_pred cccEEEEeCCCCcCCCH--------------HHHHHHHHHHHHHh
Confidence 36899999999999862 23445566666654
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=82.98 E-value=0.65 Score=45.03 Aligned_cols=41 Identities=5% Similarity=-0.186 Sum_probs=32.4
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCC
Q 003145 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSS 815 (844)
Q Consensus 768 nKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna 815 (844)
.+..+++.++++++ ++++.+++||| +.+| |.+ |+.+++-+.
T Consensus 142 p~~~~~~~~~~~~~------~~~~~~~~vgD-~~~Di~~a~~aG~~~~~~~~ 186 (200)
T 3cnh_A 142 PNPAMYRLGLTLAQ------VRPEEAVMVDD-RLQNVQAARAVGMHAVQCVD 186 (200)
T ss_dssp TCHHHHHHHHHHHT------CCGGGEEEEES-CHHHHHHHHHTTCEEEECSC
T ss_pred CCHHHHHHHHHHcC------CCHHHeEEeCC-CHHHHHHHHHCCCEEEEECC
Confidence 45678999999998 78899999999 8899 555 666665553
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=82.60 E-value=0.29 Score=48.04 Aligned_cols=16 Identities=25% Similarity=0.459 Sum_probs=14.1
Q ss_pred CCeEEEEecCCccCCC
Q 003145 590 NNRLLILGFNATLTEP 605 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~ 605 (844)
..|+|+||+||||++.
T Consensus 3 ~~k~iifDlDGTL~d~ 18 (209)
T 2hdo_A 3 TYQALMFDIDGTLTNS 18 (209)
T ss_dssp CCSEEEECSBTTTEEC
T ss_pred cccEEEEcCCCCCcCC
Confidence 3589999999999986
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=82.52 E-value=0.28 Score=48.70 Aligned_cols=16 Identities=19% Similarity=0.169 Sum_probs=14.4
Q ss_pred CCeEEEEecCCccCCC
Q 003145 590 NNRLLILGFNATLTEP 605 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~ 605 (844)
+.|+|+||+||||++.
T Consensus 5 ~~k~i~fD~DGTL~d~ 20 (240)
T 3smv_A 5 DFKALTFDCYGTLIDW 20 (240)
T ss_dssp GCSEEEECCBTTTBCH
T ss_pred cceEEEEeCCCcCcCC
Confidence 5789999999999976
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=81.85 E-value=0.37 Score=48.91 Aligned_cols=59 Identities=10% Similarity=0.017 Sum_probs=42.3
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCc-EEEeCC----C---CcchhhhcCCHHHHHHH
Q 003145 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFL-IQVGSS----I---NSLSKEKKRKVHQLFGI 833 (844)
Q Consensus 768 nKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~-Iavgna----~---~~~a~~~l~~~~~v~~~ 833 (844)
.|+.++..++++++ ++++.+++||| +.|| |.+ |++ |.|.++ . ...|.+.+++..++..+
T Consensus 171 p~~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el~~~ 241 (243)
T 2hsz_A 171 PHPAPFYYLCGKFG------LYPKQILFVGD-SQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKI 241 (243)
T ss_dssp TSSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGG
T ss_pred cCHHHHHHHHHHhC------cChhhEEEEcC-CHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHHHHH
Confidence 36889999999998 77899999999 8899 666 665 344432 1 12355567777776544
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=81.49 E-value=0.38 Score=48.48 Aligned_cols=32 Identities=9% Similarity=0.212 Sum_probs=23.4
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhc
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCH 636 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~ 636 (844)
.|+|+||+||||++.. ....+...++++++..
T Consensus 2 ~k~iiFDlDGTL~d~~--------------~~~~~~~~~~~~~~~~ 33 (241)
T 2hoq_A 2 VKVIFFDLDDTLVDTS--------------KLAEIARKNAIENMIR 33 (241)
T ss_dssp CCEEEECSBTTTBCHH--------------HHHHHHHHHHHHHHHH
T ss_pred ccEEEEcCCCCCCCCh--------------hhHHHHHHHHHHHHHH
Confidence 4799999999999862 2344567777777754
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=81.31 E-value=0.76 Score=51.76 Aligned_cols=34 Identities=21% Similarity=0.236 Sum_probs=26.3
Q ss_pred CCChhHHHHHHHhhcCCCCcEEEEcCC------ChhhHHHh
Q 003145 622 KLHPDLKQPLNALCHDPKTTIVVLSGS------DRNVLDKN 656 (844)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~I~SGR------~~~~l~~~ 656 (844)
.+.+.+.++|+.|.+ .|.+++|+|+. ....+...
T Consensus 100 ~~~~~~~~~L~~L~~-~g~~~~i~Tn~~~~~~~~~~~~~~~ 139 (555)
T 3i28_A 100 KINRPMLQAALMLRK-KGFTTAILTNTWLDDRAERDGLAQL 139 (555)
T ss_dssp EECHHHHHHHHHHHH-TTCEEEEEECCCCCCSTTHHHHHHH
T ss_pred CcChhHHHHHHHHHH-CCCEEEEEeCCCccccchhhHHHHH
Confidence 466788899999998 59999999997 55555443
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 844 | ||||
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 1e-134 | |
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 2e-08 | |
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 1e-05 | |
| d2bfwa1 | 196 | c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Py | 8e-04 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 405 bits (1041), Expect = e-134
Identities = 158/472 (33%), Positives = 238/472 (50%), Gaps = 22/472 (4%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQK 153
RL+VV+NR+ SAGGL +LG K W GW+G ++ Q
Sbjct: 2 RLVVVSNRIAPPDEHAA--------SAGGLAVGILGALKAAGGLWFGWSGETGNED--QP 51
Query: 154 ALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAA 213
L E + +YYN + N +LWP FHY RL + + +
Sbjct: 52 LKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHY-------RLDLVQFQRPAWDG 104
Query: 214 YIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR 273
Y++ N + AD + +D D++W HDYHL+ L++ + ++G+FLH PFP+ EI
Sbjct: 105 YLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFN 164
Query: 274 TLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVED-QGRLTRVAAFP 332
LP+ LL + DL+GF T + F+ + + G+ R +P
Sbjct: 165 ALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYP 224
Query: 333 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN 392
IGI+ + + P+ + +L+ + + V+RLD KG+P++ LA+E LE+
Sbjct: 225 IGIEPKEIAKQAA-GPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKY 283
Query: 393 SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPA 452
GK+ QIA +R DV YQ + Q+ GRING++G L P+++L++ D
Sbjct: 284 PQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKL 343
Query: 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQ-DLKKGVLILSEFAGAAQSLGAGAILVNP 511
L ++ +DV LVT LRDGMNLV+ E+VA Q GVL+LS+FAGAA L A++VNP
Sbjct: 344 LMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT-SALIVNP 402
Query: 512 WNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTV 563
++ EVA A+ RAL MS ER RH + + W E F+S+L V
Sbjct: 403 YDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQIV 454
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 55.2 bits (131), Expect = 2e-08
Identities = 67/395 (16%), Positives = 135/395 (34%), Gaps = 27/395 (6%)
Query: 165 IPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADV 224
I VF +E V Y N ++ + L ++ + + +A+ + +
Sbjct: 54 IRVFGEEVQVKVSYEERGNLRIYRIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLND 113
Query: 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA 284
+ + DVV HD+H +F +K+Y + + +H S + + L
Sbjct: 114 LLREEPLPDVVHFHDWHTVFAGALIKKYF-KIPAVFTIHRLNKSK-LPAFYFHEAGLSEL 171
Query: 285 VLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRAL 344
D+ HT Y V+ +R + +G++T V GID + +
Sbjct: 172 APYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYV---FNGIDCSFWNESY 228
Query: 345 EINPVQVHIKELQETFA--GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLL 402
K L F + + R D + LL + L +++
Sbjct: 229 LTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRF-- 286
Query: 403 QIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 462
+ PE + + E G + L+ + L S+DF + + + +
Sbjct: 287 ---IIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGL 343
Query: 463 ALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIA 522
+ ++ G ++ +D+ ILV + E+ANAI
Sbjct: 344 VALEAMCLGAIPIASAVGGLRDIITNE---------------TGILVKAGDPGELANAIL 388
Query: 523 RALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVS 557
+AL +S + K + + + ++ AE +V
Sbjct: 389 KALELSRSDLSKFRENCKKRAMSFSWEKSAERYVK 423
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 46.2 bits (108), Expect = 1e-05
Identities = 49/356 (13%), Positives = 93/356 (26%), Gaps = 47/356 (13%)
Query: 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE-YNSDMKVGWFLHTPFPS 268
+FAA A V ++ D+V HD+ P ++ ++ +H
Sbjct: 110 RFAALSLAAARIGAGVLPGWRP-DMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQ 168
Query: 269 SEIHRTLPSRSDLLRAVLAAD----------LVGFHTYDYARHFVSACTR---ILGFEGT 315
+ + S+ L + L G A VS + G
Sbjct: 169 GQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGM 228
Query: 316 PEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRK----------- 364
R + GID++ + A + + + A K
Sbjct: 229 GLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDD 288
Query: 365 ----VMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTS 420
+ + RL KGI A ++ + V +
Sbjct: 289 DGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRL----------VVLGAGDVALEGALL 338
Query: 421 QVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFV 480
G H + D + + + + + +LR G V
Sbjct: 339 AAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTG 398
Query: 481 ACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNM--SPEEREK 534
D ++ A S A + +P + + AI R + P+ +
Sbjct: 399 GLADT-----VIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQ 449
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 196 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 39.4 bits (90), Expect = 8e-04
Identities = 36/204 (17%), Positives = 68/204 (33%), Gaps = 24/204 (11%)
Query: 334 GIDSERFIRALEINPVQVHIKELQETFA--GRKVMLGVDRLDMI-KGIPQKLLAFEKFLE 390
GID + + K L F + + R D KG+ L A E
Sbjct: 1 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSS 60
Query: 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDF 450
+ + +++ PE + + E G + L+ + L S+DF
Sbjct: 61 KKEFQEMRFIIIGK------GDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF 114
Query: 451 PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVN 510
+ + + + + ++ G ++ +D+ ILV
Sbjct: 115 VIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNETG---------------ILVK 159
Query: 511 PWNITEVANAIARALNMSPEEREK 534
+ E+ANAI +AL +S + K
Sbjct: 160 AGDPGELANAILKALELSRSDLSK 183
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 844 | |||
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 100.0 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 99.95 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 99.93 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.93 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.88 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.88 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.87 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.87 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.86 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.86 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.86 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 99.85 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.85 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.84 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.81 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.8 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.78 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 99.72 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.71 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 99.71 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.13 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.46 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.22 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.97 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 97.69 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 97.59 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 97.58 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 97.53 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 97.26 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.15 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 96.71 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 96.29 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.25 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 96.22 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 95.72 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 94.88 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 94.84 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 94.38 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 93.9 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 93.75 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 93.61 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 92.18 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 91.87 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 91.8 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 91.36 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 91.15 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 90.96 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 90.7 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 89.97 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 89.41 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 89.28 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 89.2 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 88.18 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 87.81 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 87.38 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 80.63 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 80.35 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.5e-96 Score=844.50 Aligned_cols=449 Identities=35% Similarity=0.621 Sum_probs=413.2
Q ss_pred CcEEEEEcCCCcceEecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchhhhHHHHhccCceEEEEecChH
Q 003145 94 QRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDED 172 (844)
Q Consensus 94 ~~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~~~~~~~~~~~~~~~~~pV~l~~~ 172 (844)
+||||||||+|+...+ ..++|||++||.++ +..+|+||||+|...++++. .......+++|.||+|+++
T Consensus 1 srlivvsnr~~~~~~~--------~~~~gGl~~al~~~~~~~~g~Wvgw~g~~~~~~~~--~~~~~~~~~~~~~v~l~~~ 70 (456)
T d1uqta_ 1 SRLVVVSNRIAPPDEH--------AASAGGLAVGILGALKAAGGLWFGWSGETGNEDQP--LKKVKKGNITWASFNLSEQ 70 (456)
T ss_dssp CCEEEEEEECCCCC------------CCCHHHHHHHHHHHHHCEEEEEEEEEESCCSSC--CEEEEETTEEEEEEEECHH
T ss_pred CCEEEEECCCCCCCCC--------CCCCccHHHHhHHHHhhCCCEEEecCCCCCcccch--hhhhhccCceeEEecCCHH
Confidence 5899999999997643 24799999999998 78899999999976554322 2233457899999999999
Q ss_pred hhhhhhhhhhhhccccccCCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhHHHHHHh
Q 003145 173 IVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE 251 (844)
Q Consensus 173 ~~~~~Y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~lr~ 251 (844)
++++||+||||++|||+|||+.... .|+ ++|++|++||+.||++|.+.++++|+||||||||+++|.+||+
T Consensus 71 ~~~~~Y~gf~n~~LWpl~H~~~~~~--------~~~~~~~~~Y~~vN~~fA~~l~~~~~~~d~iwvhDyhl~llp~~lR~ 142 (456)
T d1uqta_ 71 DLDEYYNQFSNAVLWPAFHYRLDLV--------QFQRPAWDGYLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELRK 142 (456)
T ss_dssp HHHHHTTTHHHHTHHHHHTTCGGGC--------CCCHHHHHHHHHHHHHHHHHHGGGCCTTCEEEEESGGGTTHHHHHHH
T ss_pred HHHHHHHHhhhccccccccCccccc--------cccHHHHHHHHHHHHHHHHHHHHhccCCCeEEEeccchhhhHHHHHH
Confidence 9999999999999999999984322 355 5699999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccC-CCceeeCCeEEEEEE
Q 003145 252 YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGT-PEGVEDQGRLTRVAA 330 (844)
Q Consensus 252 ~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~-~~~v~~~g~~~~v~v 330 (844)
+.|+++|+||+|+|||++++|+++|++++|+++|+++|+||||+++|++||+.+|.++++.+.. ...+.+.|+.+++.+
T Consensus 143 ~~~~~~i~~flH~pfP~~~~fr~lp~~~~il~~ll~~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~~i~~~gr~v~v~~ 222 (456)
T d1uqta_ 143 RGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEV 222 (456)
T ss_dssp TTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEE
T ss_pred hCCCCcEEEEeCCCCCChHHhccCcchHHHHHHhhccccccccCHHHHHHHHHHHHHHhCcccccCCeEEecCceeeeee
Confidence 9999999999999999999999999999999999999999999999999999999999988653 456788999999999
Q ss_pred EecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCC
Q 003145 331 FPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT 410 (844)
Q Consensus 331 ~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~ 410 (844)
+|+|||++.|.+....+ ..+.+.+++..++++++|++|||+++.||+..+|+||++|++++|+++++++|+|++.|+++
T Consensus 223 ~p~GID~~~~~~~~~~~-~~~~~~~l~~~~~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~~ 301 (456)
T d1uqta_ 223 YPIGIEPKEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRG 301 (456)
T ss_dssp CCCCCCHHHHHHHHHSC-CCHHHHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCST
T ss_pred ecCcccchhhhhhcccH-HHHHHHHHHHhcCCCeEEEEeCCCchhhchHHHHHHHHHHHHhCccccccEEEEEEcCCccc
Confidence 99999999998876554 34566788888999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhccc-CCCce
Q 003145 411 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD-LKKGV 489 (844)
Q Consensus 411 ~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~-~~~g~ 489 (844)
+.++|.+++.++.++|++||++|++.+|.|++++.+.++++++.++|+.|||+++||++||||||++||||||. .++|+
T Consensus 302 ~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~ 381 (456)
T d1uqta_ 302 DVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGV 381 (456)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCE
T ss_pred chHHHHHHHHHHHHHHHHHHhhhccCCCCceeeccCCcCHHHHhHHHhhhceeecCCccCCCCcHHHHHHHhCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999995 35789
Q ss_pred EEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 003145 490 LILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (844)
Q Consensus 490 lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (844)
||+|+++|+++++ .+|++|||+|++++|+||.++|+||++||++|+++++++|.+||+++|+++||.+|+++
T Consensus 382 lIlS~~~G~~~~l-~~g~lVnP~d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~~~~~~W~~~fl~~l~~~ 453 (456)
T d1uqta_ 382 LVLSQFAGAANEL-TSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQI 453 (456)
T ss_dssp EEEETTBGGGGTC-TTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred EEEeCCCCCHHHh-CCeEEECcCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhh
Confidence 9999999999999 57999999999999999999999999999999999999999999999999999999875
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.95 E-value=5.6e-28 Score=246.49 Aligned_cols=220 Identities=15% Similarity=0.175 Sum_probs=174.2
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCceEEeecceEE
Q 003145 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFL 672 (844)
Q Consensus 593 Li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~liaenG~~i 672 (844)
||+||+||||++....| ....++++++++|++|++ ++.|+|+|||+...++..+.. ..+++++||+.+
T Consensus 2 Li~~DlDGTL~~~~~~~---------~~~~i~~~~~~~l~~l~~--~~~v~i~TGR~~~~l~~~~~~-~~~~~~~ng~~~ 69 (229)
T d1u02a_ 2 LIFLDYDGTLVPIIMNP---------EESYADAGLLSLISDLKE--RFDTYIVTGRSPEEISRFLPL-DINMICYHGACS 69 (229)
T ss_dssp EEEEECBTTTBCCCSCG---------GGCCCCHHHHHHHHHHHH--HSEEEEECSSCHHHHHHHSCS-SCEEEEGGGTEE
T ss_pred EEEEEecCCCCCCCCCh---------hhCCCCHHHHHHHHHHhh--CCCEEEEcCCCHHHhhhhcCc-cccEEecCeEEE
Confidence 89999999999876655 467799999999999986 678999999999999877654 458999999999
Q ss_pred EecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeE
Q 003145 673 RCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVE 752 (844)
Q Consensus 673 ~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~ 752 (844)
...+..+.... ......|.+.+.+.+..+....+|...+.+...+.+++....+.........+.+.+ ....+.
T Consensus 70 ~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~ 143 (229)
T d1u02a_ 70 KINGQIVYNNG-SDRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIA-----RIFGVE 143 (229)
T ss_dssp EETTEEEECTT-GGGGHHHHHHHHHHHTTHHHHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHH-----HHHTCE
T ss_pred ecCCceeeecc-hhhhHHHHHHHHHHhHHhhcccCCceecccccceeeeehhhhhhhHHHHHHHHHHHh-----hcCCeE
Confidence 87555443322 344566777888888888888999999999999999998765543333333333322 233567
Q ss_pred EEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc----cCcEEEeCCCCcchhhhcCC
Q 003145 753 VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT----QFLIQVGSSINSLSKEKKRK 826 (844)
Q Consensus 753 v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~----g~~Iavgna~~~~a~~~l~~ 826 (844)
+.+|..++||.|+|+|||.|++.|++ .++++|||| +.|| ||+ +++|+||++ ++.|++++++
T Consensus 144 ~~~~~~~idi~p~g~~Kg~al~~l~~-----------~~~~i~~GD-s~ND~~Mf~~~~~~~av~~g~~-~~~A~~~~~~ 210 (229)
T d1u02a_ 144 TYYGKMIIELRVPGVNKGSAIRSVRG-----------ERPAIIAGD-DATDEAAFEANDDALTIKVGEG-ETHAKFHVAD 210 (229)
T ss_dssp EEECSSEEEEECTTCCHHHHHHHHHT-----------TSCEEEEES-SHHHHHHHHTTTTSEEEEESSS-CCCCSEEESS
T ss_pred EEeeceEEEEecCCCCHHHHHHHHhc-----------cccceeecC-CCChHHHHhccCCeEEEEeCCC-CccCeEEcCC
Confidence 88999999999999999999999964 357899999 9999 998 456667775 6789999999
Q ss_pred HHHHHHHHHHHhhccCC
Q 003145 827 VHQLFGIFLRFSYSGVQ 843 (844)
Q Consensus 827 ~~~v~~~l~~~~~~~~~ 843 (844)
++||..+|+.|-..|++
T Consensus 211 ~~ev~~~l~~l~~~~~~ 227 (229)
T d1u02a_ 211 YIEMRKILKFIEMLGVQ 227 (229)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999988766653
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.93 E-value=7.5e-25 Score=249.94 Aligned_cols=322 Identities=16% Similarity=0.206 Sum_probs=221.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhCC--CCCEEEEeCccchhHHHHHH-hcCCCCeEEEEEecCCCC----hhhhhcCC--c
Q 003145 207 FQSQFAAYIKANQMFADVVNKHYK--DGDVVWCHDYHLMFLPKCLK-EYNSDMKVGWFLHTPFPS----SEIHRTLP--S 277 (844)
Q Consensus 207 ~~~~~~~Y~~vN~~fa~~i~~~~~--~~DiVwvHDyhl~llp~~lr-~~~~~~~i~~flH~Pfp~----~e~~r~lp--~ 277 (844)
|.+.|..|...++.+++.+..... ..|+||+||+|..+.+.+++ .+.+++|+++++|..... ...+..+. +
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pDIvH~h~~~~~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~ 183 (477)
T d1rzua_ 104 YPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPA 183 (477)
T ss_dssp CTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCG
T ss_pred ccccHHHHHHHHHHHHhhhhhcccCCCCCEEEecchhHHHHHHHHHHhhCCCCCEEEEEecccccccCCHHHHHHhhcch
Confidence 334577888888888876665544 46999999999999998887 446789999999975211 11221111 0
Q ss_pred -------------cHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhh
Q 003145 278 -------------RSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRAL 344 (844)
Q Consensus 278 -------------r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~ 344 (844)
...+..++..+|.+...+..+++..+..-. ..+.+ .+ ...+..++.++|+|||.+.|.+..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~~~~~~-~~~~~----~~-~~~~~~~~~vi~ngv~~~~~~p~~ 257 (477)
T d1rzua_ 184 HAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEF-GMGLE----GV-IGSRAHVLHGIVNGIDADVWNPAT 257 (477)
T ss_dssp GGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHH-HTTCH----HH-HHTTGGGEEECCCCBCTTTSCTTT
T ss_pred hhcccccccccchhHHHHHHHHhhhhhhhccHHHHHHHHHHhc-Ccchh----hh-hhhccccEEEEECCcchhhccccc
Confidence 112344567799999988888776543211 00100 00 111234688899999999886532
Q ss_pred cC-----------CchHHHHHHHHHHh----CCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCC
Q 003145 345 EI-----------NPVQVHIKELQETF----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTR 409 (844)
Q Consensus 345 ~~-----------~~~~~~~~~lr~~~----~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r 409 (844)
.. .........++..+ ++.++|+++||+++.||++.+++|++++++.++ .|+++|.+
T Consensus 258 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~------~l~~~G~G-- 329 (477)
T d1rzua_ 258 DHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGG------RLVVLGAG-- 329 (477)
T ss_dssp CTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHTTC------EEEEEECB--
T ss_pred cccccccchhhhHHHhhhhHHHHHHhcccccCCccEEEEEeeeeecCCcHHHHHHHHHHHhhCC------eEEEEecC--
Confidence 11 01112233344444 246799999999999999999999999987643 36666642
Q ss_pred CChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCce
Q 003145 410 TDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV 489 (844)
Q Consensus 410 ~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~ 489 (844)
+... ..++.++..+++. .+.+ .+..+.+++..+|+.||+||+||.+||||+|++|||||| .|
T Consensus 330 -~~~~----~~~~~~~~~~~~~--------~v~~-~~~~~~~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~G----~P 391 (477)
T d1rzua_ 330 -DVAL----EGALLAAASRHHG--------RVGV-AIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYG----CI 391 (477)
T ss_dssp -CHHH----HHHHHHHHHHTTT--------TEEE-EESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHT----CE
T ss_pred -CchH----HHHHHHHHhhcCC--------eEEE-EcccChhHHHHHHHhCccccCCccccCCCHHHHHHHHcC----CC
Confidence 2221 2233334334332 2553 567788999999999999999999999999999999996 89
Q ss_pred EEEeCCCCchhhc--c---------CCeEEECCCCHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 003145 490 LILSEFAGAAQSL--G---------AGAILVNPWNITEVANAIARALNM--SPEEREKRHWHNFTHVTTHTAQEWAETFV 556 (844)
Q Consensus 490 lVlSe~~G~~~~l--g---------~~g~lvnP~d~~~~A~ai~~aL~m--~~~er~~r~~~~~~~v~~~~~~~W~~~fl 556 (844)
+|+|+.+|..+.+ | .+|++|+|.|++++|++|.++|+. .++.++++.+++.+ +.++|+.-+++++
T Consensus 392 vVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~a~~--~~fsw~~~a~~~~ 469 (477)
T d1rzua_ 392 PVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYA 469 (477)
T ss_dssp EEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHH
T ss_pred EEEcCCCCCcceeecCCccccccCCCceEEeCCCCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHH--hhCCHHHHHHHHH
Confidence 9999999999987 2 279999999999999999998863 34455555444422 4589999898888
Q ss_pred HHHHHh
Q 003145 557 SELNDT 562 (844)
Q Consensus 557 ~~l~~~ 562 (844)
+.++++
T Consensus 470 ~lY~~l 475 (477)
T d1rzua_ 470 ALYSQL 475 (477)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 766654
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.93 E-value=8.5e-25 Score=244.15 Aligned_cols=306 Identities=20% Similarity=0.228 Sum_probs=222.8
Q ss_pred HHHHHHHHHHhhCCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCCh---hhhhc--C------CccHHHHHhh
Q 003145 217 ANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS---EIHRT--L------PSRSDLLRAV 285 (844)
Q Consensus 217 vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~---e~~r~--l------p~r~~ll~~l 285 (844)
.....++.+......+|+|++|+++..+++.++++. .++|+.+++|..++.. ..+.. + +.........
T Consensus 106 ~~~~~~~~~~~~~~~pDiIh~~~~~~~~~~~~~~~~-~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (437)
T d2bisa1 106 ASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKY-FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGG 184 (437)
T ss_dssp HHHHHHHHHTTSSCCCSEEEEETGGGHHHHHHHHHH-HCCCEEEEESSCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCEEEECChhhhhHhhhhhcc-ccCceeEEEeeccccccchhhhhhccchhhhhHHHHHHHHHHH
Confidence 333444445544456799999999988888777665 4789999999887632 11111 1 1112233455
Q ss_pred hcCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh--CCC
Q 003145 286 LAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGR 363 (844)
Q Consensus 286 l~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~ 363 (844)
..+|.+...+..+...... .+.. ...++.++|+|+|++.|.+....+........+++++ .++
T Consensus 185 ~~~d~v~~~~~~~~~~~~~----~~~~-----------~~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (437)
T d2bisa1 185 YIADIVTTVSRGYLIDEWG----FFRN-----------FEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEG 249 (437)
T ss_dssp HHSSEEEESCHHHHHHTHH----HHGG-----------GTTTEEECCCCCCTTTSCGGGCCSCHHHHHHHHHHHTTCCSC
T ss_pred Hhhhhhcccchhhhhhhhh----hhcc-----------ccCceEEEecccccccccccccchhhHHHHHhhhhhhhccCC
Confidence 6788888877655433221 1111 1235788999999999887655444444555666666 367
Q ss_pred cEEEEEeccc-ccCCHHHHHHHHHHHHHh--CcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCccc
Q 003145 364 KVMLGVDRLD-MIKGIPQKLLAFEKFLEE--NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (844)
Q Consensus 364 ~vil~VdRld-~~KGi~~~l~Af~~ll~~--~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~p 440 (844)
++|+++||++ +.||+..+++|+..+..+ .|+ +.|+++|.+ + +.+.... +.+... .+ .
T Consensus 250 ~~i~~~G~~~~~~Kg~~~ll~a~~~~~~~~~~~~----~~lvi~G~~---~-~~~~~~~---~~~~~~----~~-----~ 309 (437)
T d2bisa1 250 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE----MRFIIIGKG---D-PELEGWA---RSLEEK----HG-----N 309 (437)
T ss_dssp EEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGG----EEEEEECCB---C-HHHHHHH---HHHHHT----CT-----T
T ss_pred ceEEEeecccccchhHHHHHhhhccccccccccc----ceeeeeccc---c-cccccch---hhhccc----cc-----c
Confidence 8999999997 479999999999988653 343 568888642 1 3333222 222211 11 2
Q ss_pred EEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc-cCCeEEECCCCHHHHHH
Q 003145 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVAN 519 (844)
Q Consensus 441 v~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l-g~~g~lvnP~d~~~~A~ 519 (844)
+.++.+.++.+++..+|+.||++++||..||||++++|||||| .|+|+|+.+|..+.+ +.+|++|+|.|++++|+
T Consensus 310 ~~~~~~~~~~~~~~~~~~~adi~v~~s~~e~~~~~~~Eama~G----~Pvi~~~~g~~~e~i~~~~G~~~~~~d~~~la~ 385 (437)
T d2bisa1 310 VKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG----AIPIASAVGGLRDIITNETGILVKAGDPGELAN 385 (437)
T ss_dssp EEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHTTT----CEEEEESCTTHHHHCCTTTCEEECTTCHHHHHH
T ss_pred ceeccccCcHHHHHHHHhhhccccccccccccchHHHHHHHCC----CCEEEeCCCCcHHhEECCcEEEECCCCHHHHHH
Confidence 4557899999999999999999999999999999999999996 789999999888877 55799999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 003145 520 AIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (844)
Q Consensus 520 ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (844)
+|.++|.++++.+.++.+++++.++++||++.++++++.++++
T Consensus 386 ~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~iY~~~ 428 (437)
T d2bisa1 386 AILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGS 428 (437)
T ss_dssp HHHHHHTTTTSCTHHHHHHHHHHHHHSCHHHHHHHHHHHHHTC
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 9999998777777888888888899999999999999877654
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.88 E-value=3.5e-22 Score=200.47 Aligned_cols=192 Identities=21% Similarity=0.244 Sum_probs=153.0
Q ss_pred ccChhHHhhhhcCCchHHHHHHHHHHh--CCCcEEEEEeccc-ccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCC
Q 003145 334 GIDSERFIRALEINPVQVHIKELQETF--AGRKVMLGVDRLD-MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT 410 (844)
Q Consensus 334 GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~VdRld-~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~ 410 (844)
|||.+.|.+........+....+++++ +++++|++|||++ ++||++.+++|++.|.++.+. .++.|+++|.+
T Consensus 1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~--~~~~l~i~G~g--- 75 (196)
T d2bfwa1 1 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF--QEMRFIIIGKG--- 75 (196)
T ss_dssp CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGG--GGEEEEEECCB---
T ss_pred CcChhhcCCCCCCchhHHHHHHHHHHhCCCCCCEEEEEcCCCccccCHHHHHHHHHhhhcccCC--CCeEEEEEeec---
Confidence 899999988765555566777888887 4788999999997 589999999999999754322 13668888632
Q ss_pred ChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceE
Q 003145 411 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVL 490 (844)
Q Consensus 411 ~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~l 490 (844)
.++++...+.+ ...+ + .+.++.+.++.+++..+|+.||++++||..||||++++|||+|| .|+
T Consensus 76 -~~~~~~~~~~~---~~~~----~-----~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G----~pv 138 (196)
T d2bfwa1 76 -DPELEGWARSL---EEKH----G-----NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG----AIP 138 (196)
T ss_dssp -CHHHHHHHHHH---HHHC----T-----TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTT----CEE
T ss_pred -ccchhhhhhhh---hhcc----c-----eeEEeeeccccccchhccccccccccccccccccccchhhhhcC----cee
Confidence 24444333333 2221 1 25567899999999999999999999999999999999999996 788
Q ss_pred EEeCCCCchhhc-cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcC
Q 003145 491 ILSEFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 547 (844)
Q Consensus 491 VlSe~~G~~~~l-g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 547 (844)
|+|..+|..+.+ +..|++++|.|+++++++|.++|.+..+.+.++.+.+++++.+|+
T Consensus 139 I~~~~~~~~e~i~~~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~fs 196 (196)
T d2bfwa1 139 IASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFS 196 (196)
T ss_dssp EEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTC
T ss_pred eecCCCccceeecCCceeeECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCC
Confidence 999988887777 557999999999999999999999888777777777787776653
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.88 E-value=9.8e-23 Score=213.85 Aligned_cols=217 Identities=15% Similarity=0.225 Sum_probs=144.4
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc--CceEEeec
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--NLWLAAEN 668 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l--~l~liaen 668 (844)
.|||++|+||||+++. ...++++++++|++|++ .|+.|+++|||+...+.++++++ ..+++++|
T Consensus 2 IKli~~DlDGTLl~~~-------------~~~~~~~~~~~l~~l~~-~gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~n 67 (269)
T d1rlma_ 2 VKVIVTDMDGTFLNDA-------------KTYNQPRFMAQYQELKK-RGIKFVVASGNQYYQLISFFPELKDEISFVAEN 67 (269)
T ss_dssp CCEEEECCCCCCSCTT-------------SCCCHHHHHHHHHHHHH-HTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGG
T ss_pred EEEEEEeCCccCcCCC-------------CcCChHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCcccceEeec
Confidence 5899999999999863 22345789999999998 59999999999999999999988 45899999
Q ss_pred ceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhc---------CCCceEeeccc------------e----------
Q 003145 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTER---------TPRSHFEQRET------------S---------- 717 (844)
Q Consensus 669 G~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~r---------t~gs~iE~k~~------------s---------- 717 (844)
|+++...++.... .... .+.+...+..+... ..+.++..... .
T Consensus 68 Ga~i~~~~~~~~~---~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (269)
T d1rlma_ 68 GALVYEHGKQLFH---GELT---RHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEI 141 (269)
T ss_dssp GTEEEETTEEEEE---CCCC---HHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGC
T ss_pred eeEEEECCcEEEE---eccc---hHHHHHHHHHHHhhcCceEEEEecCceEEecCCcHHHHHHHHhhcccccccccHhhh
Confidence 9999875443211 1111 11222223222221 11222211000 0
Q ss_pred --EEEEee-cCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEE
Q 003145 718 --LVWNYK-YADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVL 794 (844)
Q Consensus 718 --l~~hy~-~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vl 794 (844)
..+.+. ...++ +..++.+++... .......+..+..++||.|+++|||.|+++|++++| +++++++
T Consensus 142 ~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~di~p~~~sK~~al~~l~~~lg------i~~~~vi 210 (269)
T d1rlma_ 142 DDVLFKFSLNLPDE----QIPLVIDKLHVA-LDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWD------LSPQNVV 210 (269)
T ss_dssp CSCEEEEEEECCGG----GHHHHHHHHHHH-TTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHT------CCGGGEE
T ss_pred cchheEEEecCCHH----HHHHHHHHHHHH-hhcceEEEEEcCceEEEecCchHHHHHHHHHhhhhc------cccccEE
Confidence 000000 01111 233344444122 222223345688999999999999999999999999 7899999
Q ss_pred EEeeCCCch--hhc--cCcEEEeCCCCc---chhhhcCCHHH--HHHHHHHHhh
Q 003145 795 CIGHFLGKV--LLT--QFLIQVGSSINS---LSKEKKRKVHQ--LFGIFLRFSY 839 (844)
Q Consensus 795 aiGD~~~nD--Mf~--g~~Iavgna~~~---~a~~~l~~~~~--v~~~l~~~~~ 839 (844)
+||| +.|| ||+ +++|+|+||.++ .|.+...+.++ |..+|++|..
T Consensus 211 ~~GD-~~ND~~Ml~~ag~~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~~~l~ 263 (269)
T d1rlma_ 211 AIGD-SGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLD 263 (269)
T ss_dssp EEEC-SGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHH
T ss_pred EEcC-CcchHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHHHh
Confidence 9999 9999 999 899999999875 44455555444 7788887765
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.87 E-value=2.8e-22 Score=210.73 Aligned_cols=221 Identities=14% Similarity=0.157 Sum_probs=144.2
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc---CceEEee
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY---NLWLAAE 667 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l---~l~liae 667 (844)
.|||+||+||||++. ...++++++++|++|++ +..++++|||++..+.+.++++ +.++|++
T Consensus 2 ~Kli~~DlDGTL~~~--------------~~~i~~~~~~al~~l~~--~~~~~i~TGR~~~~~~~~~~~~~~~~~~~I~~ 65 (267)
T d1nf2a_ 2 YRVFVFDLDGTLLND--------------NLEISEKDRRNIEKLSR--KCYVVFASGRMLVSTLNVEKKYFKRTFPTIAY 65 (267)
T ss_dssp BCEEEEECCCCCSCT--------------TSCCCHHHHHHHHHHTT--TSEEEEECSSCHHHHHHHHHHHSSSCCCEEEG
T ss_pred eEEEEEeCCccccCC--------------cCccCHHHHHHHHHHHc--CCEEEEECCCChHHHHHHHHHhcccCCceecc
Confidence 489999999999976 35689999999999986 5679999999999988888775 3579999
Q ss_pred cceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccc-----------------eEEEEeecCChhh-
Q 003145 668 NGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRET-----------------SLVWNYKYADVEF- 729 (844)
Q Consensus 668 nG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~-----------------sl~~hy~~~d~e~- 729 (844)
||+.+...++.- +.....+.++. .++++...+......+...+. ...........+.
T Consensus 66 nGa~i~~~~~~~--i~~~~i~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (267)
T d1nf2a_ 66 NGAIVYLPEEGV--ILNEKIPPEVA---KDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELV 140 (267)
T ss_dssp GGTEEEETTTEE--EEECCBCHHHH---HHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHH
T ss_pred CCeEEEeccccc--ccccCCCHHHH---HHHHHHHHhcCceEEEeeCceEEecCCcHHHHHHHHhcCCCceecCcHHHHh
Confidence 999988643321 11123444443 333333322211111110000 0000000000000
Q ss_pred ------------hHHHHHHHHHHHhcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEE
Q 003145 730 ------------GRIQARDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCI 796 (844)
Q Consensus 730 ------------~~~qa~el~~~L~~~~~~~~~~~v-~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlai 796 (844)
...+..++.+.+ .+.+.+ .+.+ .++..++||.|+++|||.|++.|+++++ ++.+.++||
T Consensus 141 ~~~~~~~i~~~~~~~~~~~~~~~l-~~~~~~-~~~~~~~~~~~~di~~~~~~K~~ai~~l~~~~~------i~~~~vva~ 212 (267)
T d1nf2a_ 141 SKMGTTKLLLIDTPERLDELKEIL-SERFKD-VVKVFKSFPTYLEIVPKNVDKGKALRFLRERMN------WKKEEIVVF 212 (267)
T ss_dssp HHHCBSEEEEECCHHHHHHHHHHH-HHHHTT-TSEEEEEETTEEEEECTTCCHHHHHHHHHHHHT------CCGGGEEEE
T ss_pred hhccceEEEEeccHHHHHHHHHHH-HHhhCC-cEEEEEeecceeeecCCCCchhHHHHHHHHhhc------cCcccEEEE
Confidence 012233444444 222222 2444 4688999999999999999999999999 789999999
Q ss_pred eeCCCch--hhc--cCcEEEeCCCCcc---hhhhcCCHHH--HHHHHHHHhhcc
Q 003145 797 GHFLGKV--LLT--QFLIQVGSSINSL---SKEKKRKVHQ--LFGIFLRFSYSG 841 (844)
Q Consensus 797 GD~~~nD--Mf~--g~~Iavgna~~~~---a~~~l~~~~~--v~~~l~~~~~~~ 841 (844)
|| +.|| ||+ +++|+||||.+++ |++...+.++ |..+|++|+.-+
T Consensus 213 GD-~~ND~~ml~~~~~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~~ll~~~ 265 (267)
T d1nf2a_ 213 GD-NENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLERISTDC 265 (267)
T ss_dssp EC-SHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHTTBCBSS
T ss_pred cC-CcchHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHHHhcc
Confidence 99 9999 999 9999999998754 4445555544 777887776543
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.87 E-value=1.9e-21 Score=205.39 Aligned_cols=213 Identities=10% Similarity=0.156 Sum_probs=141.6
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC--ceEEeec
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--l~liaen 668 (844)
.|||++|+||||++. +..++++++++|++|.+ .|+.|+++|||++..+.+.+..++ .++|++|
T Consensus 1 iKli~~DlDGTLl~~--------------~~~i~~~~~~~l~~l~~-~Gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~n 65 (285)
T d1nrwa_ 1 MKLIAIDLDGTLLNS--------------KHQVSLENENALRQAQR-DGIEVVVSTGRAHFDVMSIFEPLGIKTWVISAN 65 (285)
T ss_dssp CCEEEEECCCCCSCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGG
T ss_pred CeEEEEECCccccCC--------------CCccCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHhCCCcEEEecC
Confidence 489999999999976 35689999999999998 599999999999999999999984 5899999
Q ss_pred ceEEEec-CCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccc-------------------------------
Q 003145 669 GMFLRCT-TGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRET------------------------------- 716 (844)
Q Consensus 669 G~~i~~~-~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~------------------------------- 716 (844)
|+.+... ++.+.. ...+.+ .+.++++.+........+.....
T Consensus 66 G~~i~~~~~~~i~~---~~i~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (285)
T d1nrwa_ 66 GAVIHDPEGRLYHH---ETIDKK---RAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLK 139 (285)
T ss_dssp GTEEECTTCCEEEE---CCCCHH---HHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHH
T ss_pred ceeEEecCCceeee---ccCCHH---HHHHHHHHHHHcCCceEEecCceEEeccccHHHHHHHHHhhhhcCcccchhhhh
Confidence 9999863 333322 123432 33333333322111111100000
Q ss_pred ---------------------------eEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCC
Q 003145 717 ---------------------------SLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVT 768 (844)
Q Consensus 717 ---------------------------sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~-~g~~~vEV~p~gvn 768 (844)
...+...... . ...+.......+ .....+.++ ++..++||.|+++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~----~~~~~~~~~~s~~~~ldi~~~~~~ 213 (285)
T d1nrwa_ 140 QAAEVQYSQSGFAYINSFQELFEADEPIDFYNILGFS-F-FKEKLEAGWKRY----EHAEDLTLVSSAEHNFELSSRKAS 213 (285)
T ss_dssp HHHHHHHHTCCEEECSCGGGGTSSSSCCCEEEEEEEC-S-CHHHHHHHHHHH----TTCTTEEEECSSTTEEEEEETTCS
T ss_pred hhhhhhhccccceeechHHHHhhcccchhheeeeccc-c-hHHHHHHHHHHh----hcCCCeEEEEeCCcEEEEecccch
Confidence 0000000000 0 001111112222 122346655 47889999999999
Q ss_pred HHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCc---chhhhcCCHH--HHHHHHHHH
Q 003145 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINS---LSKEKKRKVH--QLFGIFLRF 837 (844)
Q Consensus 769 KG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~---~a~~~l~~~~--~v~~~l~~~ 837 (844)
||.|+++|+++++ ++.+.+++||| +.|| ||+ +++|+|+||.++ .|++...+++ -|..+|++|
T Consensus 214 K~~ai~~l~~~~g------i~~~~vi~~GD-~~ND~~Ml~~a~~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~~l 284 (285)
T d1nrwa_ 214 KGQALKRLAKQLN------IPLEETAAVGD-SLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMKHL 284 (285)
T ss_dssp HHHHHHHHHHHTT------CCGGGEEEEES-SGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHT
T ss_pred hhhHHHHHHhhcc------cCcccEEEEeC-CHHHHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHh
Confidence 9999999999999 78999999999 9999 999 999999999875 4455555543 255666655
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.86 E-value=2.6e-22 Score=216.94 Aligned_cols=204 Identities=14% Similarity=0.160 Sum_probs=155.1
Q ss_pred EEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEE
Q 003145 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLL 402 (844)
Q Consensus 326 ~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv 402 (844)
.++.++|+|||++.+.+... +. ....+|..+ .++++|+++||+.+.||+..+++|++.+.++.|+.. ++
T Consensus 159 ~~i~vi~~gv~~~~~~~~~~-~~---~~~~~r~~~~~~~~~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~~----~~ 230 (370)
T d2iw1a1 159 ERFQILPPGIYPDRKYSEQI-PN---SREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNT----LL 230 (370)
T ss_dssp GGEEECCCCCCGGGSGGGSC-TT---HHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTE----EE
T ss_pred ceEEEEEeecccccccccCc-hh---hhhhhhhccCCCccceEEEEEeccccccchhhhcccccccccccccce----ee
Confidence 35789999999987765422 22 223455555 378899999999999999999999999888777543 55
Q ss_pred EEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhc
Q 003145 403 QIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482 (844)
Q Consensus 403 ~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~ 482 (844)
+++.+. ... ++++++.+++.. ..+++ .+. .+++..+|+.||++|+||..||||++++|||||
T Consensus 231 ii~g~~--~~~-------~~~~~~~~~~~~------~~v~~-~g~--~~~~~~~~~~adv~v~ps~~E~~~~~~~EAma~ 292 (370)
T d2iw1a1 231 FVVGQD--KPR-------KFEALAEKLGVR------SNVHF-FSG--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITA 292 (370)
T ss_dssp EEESSS--CCH-------HHHHHHHHHTCG------GGEEE-ESC--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHH
T ss_pred eccccc--ccc-------cccccccccccc------ccccc-ccc--ccccccccccccccccccccccccceeeecccC
Confidence 555422 111 233344444332 13554 454 357999999999999999999999999999999
Q ss_pred ccCCCceEEEeCCCCchhhc--cCCeEEE-CCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 003145 483 QDLKKGVLILSEFAGAAQSL--GAGAILV-NPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559 (844)
Q Consensus 483 ~~~~~g~lVlSe~~G~~~~l--g~~g~lv-nP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l 559 (844)
| .|+|+|+.+|..+.+ |.+|.++ +|.|++++|++|.++|++ ++.++++.++++++++++++..|.+...+-+
T Consensus 293 G----~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d-~~~~~~~~~~ar~~~~~~~~~~~~~~~~~ii 367 (370)
T d2iw1a1 293 G----LPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQ-SPLRMAWAENARHYADTQDLYSLPEKAADII 367 (370)
T ss_dssp T----CCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHSCCSCHHHHHHHHH
T ss_pred C----eeEEEeCCCChHHHhcCCCceEEEcCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHhChhHHHHHHHHHH
Confidence 6 899999999999988 5677654 789999999999999986 4567778888899999999999988665544
Q ss_pred H
Q 003145 560 N 560 (844)
Q Consensus 560 ~ 560 (844)
+
T Consensus 368 ~ 368 (370)
T d2iw1a1 368 T 368 (370)
T ss_dssp H
T ss_pred h
Confidence 3
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.86 E-value=2.5e-21 Score=197.00 Aligned_cols=213 Identities=14% Similarity=0.184 Sum_probs=145.3
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc--CceEEee
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--NLWLAAE 667 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l--~l~liae 667 (844)
|.|+|+||+||||++. ...++++++++|++|.+ .|..|+++|||+...++..+..+ +..++++
T Consensus 1 kiK~i~~D~DGTL~~~--------------~~~i~~~~~~~l~~l~~-~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~ 65 (230)
T d1wr8a_ 1 KIKAISIDIDGTITYP--------------NRMIHEKALEAIRRAES-LGIPIMLVTGNTVQFAEAASILIGTSGPVVAE 65 (230)
T ss_dssp CCCEEEEESTTTTBCT--------------TSCBCHHHHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHHTCCSCEEEG
T ss_pred CceEEEEecCCCCcCC--------------CCccCHHHHHHHHHHHh-CCCeEEEEeCCcHHHHHHHHHhcCCCcccccc
Confidence 5799999999999976 35688999999999988 59999999999999999888776 5579999
Q ss_pred cceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHHHHHHHHhcCCCC
Q 003145 668 NGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPIS 747 (844)
Q Consensus 668 nG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~ 747 (844)
||+.+...... ... ......|. ...++...+......-....+...+.+.-...+. ...+++.+++
T Consensus 66 ~g~~~~~~~~~--~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~------ 131 (230)
T d1wr8a_ 66 DGGAISYKKKR--IFL-ASMDEEWI-LWNEIRKRFPNARTSYTMPDRRAGLVIMRETINV----ETVREIINEL------ 131 (230)
T ss_dssp GGTEEEETTEE--EES-CCCSHHHH-HHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCH----HHHHHHHHHT------
T ss_pred cceeeeccccc--ccc-ccccHHHH-HHHHHHHhcccccceeecccceeeEEEecccccH----HHHHHHHHHh------
Confidence 99988864322 111 12232222 1222222322211111122233333332111122 2235555555
Q ss_pred CCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcc---h
Q 003145 748 NASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSL---S 820 (844)
Q Consensus 748 ~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~---a 820 (844)
...+....+...+||+|.+++||.|++.++++++ ++++.+++||| +.|| ||+ +++|+|||+.+.+ |
T Consensus 132 ~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~------i~~~~~~~iGD-~~NDi~ml~~ag~~vav~na~~~~k~~A 204 (230)
T d1wr8a_ 132 NLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLG------IKPKEVAHVGD-GENDLDAFKVVGYKVAVAQAPKILKENA 204 (230)
T ss_dssp TCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHT------SCGGGEEEEEC-SGGGHHHHHHSSEEEECTTSCHHHHTTC
T ss_pred ccceEEeeCCcEEEEeeCCcCcchhhcccccccc------cchhheeeeec-CccHHHHHHHCCeEEEECCCCHHHHHhC
Confidence 2245667778899999999999999999999999 78899999999 9999 999 9999999998654 5
Q ss_pred hhhcCCHH--HHHHHHHHHh
Q 003145 821 KEKKRKVH--QLFGIFLRFS 838 (844)
Q Consensus 821 ~~~l~~~~--~v~~~l~~~~ 838 (844)
++...+.+ -+..+|..+.
T Consensus 205 ~~v~~~~~~~gv~~~i~~~l 224 (230)
T d1wr8a_ 205 DYVTKKEYGEGGAEAIYHIL 224 (230)
T ss_dssp SEECSSCHHHHHHHHHHHHH
T ss_pred CEEECCCCcCHHHHHHHHHH
Confidence 55565543 2444444443
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.86 E-value=5.7e-22 Score=207.98 Aligned_cols=218 Identities=12% Similarity=0.184 Sum_probs=141.9
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC-----ceE
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN-----LWL 664 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-----l~l 664 (844)
..|||++|+||||++. +..++++++++|++|++ .|+.|+|+|||++..+.++++.++ .++
T Consensus 3 ~iKli~~DlDGTL~~~--------------~~~i~~~~~~al~~L~~-~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~ 67 (271)
T d1rkqa_ 3 AIKLIAIDMDGTLLLP--------------DHTISPAVKNAIAAARA-RGVNVVLTTGRPYAGVHNYLKELHMEQPGDYC 67 (271)
T ss_dssp CCCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCGGGTHHHHHHTTCCSTTCEE
T ss_pred CeeEEEEeCCccccCC--------------CCccCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHhcCcCCCcEE
Confidence 4799999999999976 35688999999999998 499999999999999999988863 468
Q ss_pred EeecceEEEe-cCCeeeecccccCChHHHHHHHHHHHHHHhc-----CCCceEeeccc-------------eEEE-----
Q 003145 665 AAENGMFLRC-TTGKWMTTMPEHLNMEWVDSLKHVFEYFTER-----TPRSHFEQRET-------------SLVW----- 720 (844)
Q Consensus 665 iaenG~~i~~-~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~r-----t~gs~iE~k~~-------------sl~~----- 720 (844)
+++||+.+.. .++... .....+.+....+..+.+..... ..+.+...+.. ...+
T Consensus 68 i~~nGa~i~~~~~~~~i--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (271)
T d1rkqa_ 68 ITYNGALVQKAADGSTV--AQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEK 145 (271)
T ss_dssp EEGGGTEEEETTTCCEE--EECCBCHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGG
T ss_pred EEcCceeEeccCCCeEE--EeecccHHHHHHHHHHHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhh
Confidence 9999999875 233221 11123333344444444332110 00011110000 0000
Q ss_pred ---------EeecCChhhhHHHHHHHHHHHhcCCCCCCCeE-EEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCC
Q 003145 721 ---------NYKYADVEFGRIQARDMLQHLWTGPISNASVE-VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAI 790 (844)
Q Consensus 721 ---------hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~ 790 (844)
...-.+++ ...+..+.+ ...+.. .+. +..++.++||.|+++|||.|++.|+++++ ++.
T Consensus 146 ~~~~~~~~~~~~~~~~~----~~~~~~~~l-~~~~~~-~~~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~------i~~ 213 (271)
T d1rkqa_ 146 MDPNTQFLKVMMIDEPA----ILDQAIARI-PQEVKE-KYTVLKSAPYFLEILDKRVNKGTGVKSLADVLG------IKP 213 (271)
T ss_dssp SCTTCCBCEEEEECCHH----HHHHHHHHS-CHHHHH-HEEEEEEETTEEEEEETTCSHHHHHHHHHHHHT------CCG
T ss_pred cCcccceEEEEEecCHH----HHHHHHHHH-HHHhhc-ceEEEEecCceEEecCCCCCcccccceehhhcc------cch
Confidence 00001121 122333333 111111 234 35688999999999999999999999998 788
Q ss_pred ceEEEEeeCCCch--hhc--cCcEEEeCCCCcch---hhhcCCHHH--HHHHHHHH
Q 003145 791 DYVLCIGHFLGKV--LLT--QFLIQVGSSINSLS---KEKKRKVHQ--LFGIFLRF 837 (844)
Q Consensus 791 d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~a---~~~l~~~~~--v~~~l~~~ 837 (844)
++++|||| +.|| ||+ +++|+|+||.+++. .+...++++ +..+|+++
T Consensus 214 ~~ii~~GD-~~ND~~ml~~~~~~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~~~ 268 (271)
T d1rkqa_ 214 EEIMAIGD-QENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKY 268 (271)
T ss_dssp GGEEEEEC-SGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHHHH
T ss_pred hcEEEEeC-cHhHHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCcChHHHHHHHH
Confidence 99999999 9999 999 89999999987653 444555444 55666654
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=99.85 E-value=1.7e-21 Score=201.62 Aligned_cols=215 Identities=13% Similarity=0.117 Sum_probs=144.9
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC----ceEE
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN----LWLA 665 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~----l~li 665 (844)
++.||++|+||||++.. .. ++.++++.++.+ .|..|+|+|||++..+.++++.++ .+++
T Consensus 2 ~~~li~~DlDGTL~~~~--------------~~--~~~~~~~~~~~~-~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i 64 (244)
T d1s2oa1 2 RQLLLISDLDNTWVGDQ--------------QA--LEHLQEYLGDRR-GNFYLAYATGRSYHSARELQKQVGLMEPDYWL 64 (244)
T ss_dssp CSEEEEECTBTTTBSCH--------------HH--HHHHHHHHHTTG-GGEEEEEECSSCHHHHHHHHHHHTCCCCSEEE
T ss_pred CceEEEEECcccCCCCC--------------CC--HHHHHHHHHHHc-CCCEEEEECCCCHHHHHHHHHHcCCCCCceEE
Confidence 56799999999999762 22 244556666665 599999999999999999998774 3689
Q ss_pred eecceEEEecCCe---eeecccccCChHHHHHHHHHHHHHHhcCCCceE----eeccceEEEEeecCChhhhHHHHHHHH
Q 003145 666 AENGMFLRCTTGK---WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHF----EQRETSLVWNYKYADVEFGRIQARDML 738 (844)
Q Consensus 666 aenG~~i~~~~~~---w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~i----E~k~~sl~~hy~~~d~e~~~~qa~el~ 738 (844)
++||+.+....+. |...++.. |. .+++..+....++... +.....+.+.+.....+.. ..++.
T Consensus 65 ~~~G~~i~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 134 (244)
T d1s2oa1 65 TAVGSEIYHPEGLDQHWADYLSEH----WQ---RDILQAIADGFEALKPQSPLEQNPWKISYHLDPQACPTV---IDQLT 134 (244)
T ss_dssp ETTTTEEEETTEECHHHHHHHHTT----CC---HHHHHHHHHTCTTEEECCGGGCBTTBEEEEECTTSCTHH---HHHHH
T ss_pred eccceEEEEccCcchHHHHHHHHH----Hh---HHHHHHHHhhcccccccChhhhcceEEEEeccccccHHH---HHHHH
Confidence 9999999863321 22211111 11 1122233333333322 2334456666544332211 22333
Q ss_pred HHHhcCCCCCCCeE-EEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEe
Q 003145 739 QHLWTGPISNASVE-VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVG 813 (844)
Q Consensus 739 ~~L~~~~~~~~~~~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavg 813 (844)
..+ ..... .+. +..+.+++||.|++++||.|++.|+++++ ++.+.++|||| +.|| ||+ +++|+||
T Consensus 135 ~~~-~~~~~--~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~g------i~~~~~v~~GD-~~ND~~Ml~~~~~~vav~ 204 (244)
T d1s2oa1 135 EML-KETGI--PVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLA------MEPSQTLVCGD-SGNDIGLFETSARGVIVR 204 (244)
T ss_dssp HHH-HTSSC--CEEEEEETTTEEEEEETTCSHHHHHHHHHHHTT------CCGGGEEEEEC-SGGGHHHHTSSSEEEECT
T ss_pred HHH-Hhhcc--cceeeecCCcEEEEEeCccchhHHHHHHHHhcc------CChhhEEEEcC-CCCCHHHHhhCCcEEEeC
Confidence 333 33222 233 44677899999999999999999999999 78899999999 9999 999 8999999
Q ss_pred CCCCcchhh---------hcCCHHHHHHHHHHHhhcc
Q 003145 814 SSINSLSKE---------KKRKVHQLFGIFLRFSYSG 841 (844)
Q Consensus 814 na~~~~a~~---------~l~~~~~v~~~l~~~~~~~ 841 (844)
|+.+++.+. .+++.++.-++++.|-.+|
T Consensus 205 na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~f~ 241 (244)
T d1s2oa1 205 NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAHFD 241 (244)
T ss_dssp TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHHTT
T ss_pred CCCHHHHHHhhcccccceEEcCCCCccHHHHHHHHhC
Confidence 998876543 2666667778888777665
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.85 E-value=2.1e-21 Score=203.07 Aligned_cols=199 Identities=15% Similarity=0.186 Sum_probs=129.3
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcc--c--CceEEe
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE--Y--NLWLAA 666 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~--l--~l~lia 666 (844)
.|+||||+||||++.. ...++++++++|++|.+ .|+.|+++|||++..+..++.. + ..++|+
T Consensus 1 ~k~if~DlDGTL~~~~-------------~~~i~~~~~~al~~l~~-~gi~v~~~TGR~~~~~~~l~~~~~~~~~~~~I~ 66 (260)
T d2rbka1 1 TKALFFDIDGTLVSFE-------------THRIPSSTIEALEAAHA-KGLKIFIATGRPKAIINNLSELQDRNLIDGYIT 66 (260)
T ss_dssp CCEEEECSBTTTBCTT-------------TSSCCHHHHHHHHHHHH-TTCEEEEECSSCGGGCCSCHHHHHTTCCCEEEE
T ss_pred CeEEEEECCCCCcCCC-------------CCCCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHHhcCCCCceEe
Confidence 3899999999999763 35689999999999998 5999999999999877654332 2 347999
Q ss_pred ecceEEEecCCe-eeecccccCChHHHHHHHHHHHHHHhcCCCceE-eeccceEEEE----------e---ecCC-hhhh
Q 003145 667 ENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHF-EQRETSLVWN----------Y---KYAD-VEFG 730 (844)
Q Consensus 667 enG~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~i-E~k~~sl~~h----------y---~~~d-~e~~ 730 (844)
+||+++..+++. |.. .++.+....+.++++.+ .....+ .......... + .... .++.
T Consensus 67 ~nGa~i~~~~~~i~~~----~l~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (260)
T d2rbka1 67 MNGAYCFVGEEVIYKS----AIPQEEVKAMAAFCEKK---GVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFE 139 (260)
T ss_dssp GGGTEEEETTEEEEEC----CCCHHHHHHHHHHHHHH---TCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHH
T ss_pred cCCcccccCccccccc----CCCHHHHHHHHHHHHHc---CCcEEEEecCceeeccchHHHHHHHHHhhccCcCcccCHh
Confidence 999999875543 322 24444444444444332 111111 1111110000 0 0000 0000
Q ss_pred HH-----------HHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEee
Q 003145 731 RI-----------QARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 798 (844)
Q Consensus 731 ~~-----------qa~el~~~L~~~~~~~~~~~v~~-g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD 798 (844)
.. ...+....+.+.+ ..+.+.. +..++||.|+++|||.|++.|+++++ ++.+.+++|||
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ei~p~~~sK~~al~~l~~~~~------i~~~~~~a~GD 210 (260)
T d2rbka1 140 EASNKEVIQMTPFITEEEEKEVLPSI---PTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFG------IKLEETMSFGD 210 (260)
T ss_dssp HHHTSCCSEEEECCCHHHHHHHGGGS---TTCEEECSSTTCCEEESTTCSHHHHHHHHHHHHT------CCGGGEEEEEC
T ss_pred HhcCcceEEEeecCCHHHHHHHHHHh---ccccceeecCcEEEEEeCCCCHHHHHHHHHHhcc------ccHhheeEecC
Confidence 00 0011122221221 1345554 67789999999999999999999999 78999999999
Q ss_pred CCCch--hhc--cCcEEEeCCCCcch
Q 003145 799 FLGKV--LLT--QFLIQVGSSINSLS 820 (844)
Q Consensus 799 ~~~nD--Mf~--g~~Iavgna~~~~a 820 (844)
+.|| ||+ +++|+|+||.+++.
T Consensus 211 -~~ND~~Ml~~a~~svav~na~~~lk 235 (260)
T d2rbka1 211 -GGNDISMLRHAAIGVAMGQAKEDVK 235 (260)
T ss_dssp -SGGGHHHHHHSSEEEECTTSCHHHH
T ss_pred -CcccHHHHHhCCeEEEeCCCCHHHH
Confidence 9999 999 99999999987653
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.84 E-value=3.9e-21 Score=202.08 Aligned_cols=226 Identities=15% Similarity=0.181 Sum_probs=147.0
Q ss_pred HHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc--
Q 003145 583 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY-- 660 (844)
Q Consensus 583 ~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l-- 660 (844)
-++++.+..|||+||+||||+.+. ...++++++++|++|.+ .|+.|+|+|||++..+.+.++.+
T Consensus 2 ~~~~~~~~ikli~~DlDGTLl~~~-------------~~~i~~~~~~al~~l~~-~Gi~v~i~TGR~~~~~~~~~~~l~~ 67 (283)
T d2b30a1 2 EEALKGADIKLLLIDFDGTLFVDK-------------DIKVPSENIDAIKEAIE-KGYMVSICTGRSKVGILSAFGEENL 67 (283)
T ss_dssp HHHTTTCCCCEEEEETBTTTBCCT-------------TTCSCHHHHHHHHHHHH-HTCEEEEECSSCHHHHHHHHCHHHH
T ss_pred cccCcccCccEEEEECCCCCcCCC-------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCc
Confidence 356778899999999999998642 35689999999999987 59999999999999999888865
Q ss_pred ------CceEEeecceEEEecCC-eeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccce----------------
Q 003145 661 ------NLWLAAENGMFLRCTTG-KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETS---------------- 717 (844)
Q Consensus 661 ------~l~liaenG~~i~~~~~-~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~s---------------- 717 (844)
....++.||+.+....+ .... ...+......+.+.+..+.. ....++...+..
T Consensus 68 ~~~~~~~~~~i~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (283)
T d2b30a1 68 KKMNFYGMPGVYINGTIVYDQIGYTLLD---ETIETDVYAELISYLVEKNL-VNQTIFHRGESNYVTEDNKYADFLQKMY 143 (283)
T ss_dssp HHHTCCSCSEEEGGGTEEECTTCCEEEE---CCCCHHHHHHHHHHHHHTTC-GGGEEEEETTEEEEETTCTTTTHHHHHH
T ss_pred ccccccCCceEEEeeeEEEcCCCcEeee---cccCHHHHHHHHHHHHhhcc-cceEEEEecceeEEeccchHHHHHHHHh
Confidence 23578999999885322 2211 22333333333333322110 001111111100
Q ss_pred -----EEEEe-------------ecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHH
Q 003145 718 -----LVWNY-------------KYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAE 779 (844)
Q Consensus 718 -----l~~hy-------------~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~ 779 (844)
+.... -..++ .+..++.+.+ ...+......+..+..++||.|+++|||.|++.|++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~K~~~l~~l~~~ 218 (283)
T d2b30a1 144 SENRSIIIRHNEMLKYRTMNKLMIVLDP----SESKTVIGNL-KQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKH 218 (283)
T ss_dssp SCCCCEEECHHHHTTCCCCSEEEECCCT----TTHHHHHHHH-HHHSTTTEEEEECTTSCEEEEETTCCHHHHHHHHHHH
T ss_pred hccccccccHHHHhhcccceEEEEecCH----HHHHHHHHHH-HHHhcccceEEEecceeEeecCCcchhHHHHHHHhhh
Confidence 00000 00001 1123334444 2222222223455788999999999999999999999
Q ss_pred hcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcchh---hhcCCHHH---HHHHHHHHh
Q 003145 780 IVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSLSK---EKKRKVHQ---LFGIFLRFS 838 (844)
Q Consensus 780 l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~a~---~~l~~~~~---v~~~l~~~~ 838 (844)
++ ++.+.++|||| +.|| ||+ +++|+|+||.+++.+ +...+.++ |..+|+++.
T Consensus 219 ~~------i~~~~vi~~GD-~~ND~~Ml~~a~~~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~~~~ 280 (283)
T d2b30a1 219 YN------ISNDQVLVVGD-AENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVF 280 (283)
T ss_dssp TT------CCGGGEEEEEC-SGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHH
T ss_pred cc------cccceEEEecC-ChhhHHHHHhCCcEEEeCCCCHHHHHhCCEEECCcCCCcHHHHHHHHHH
Confidence 98 78899999999 9999 999 899999999876544 34443332 667777764
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.81 E-value=8.7e-20 Score=186.42 Aligned_cols=192 Identities=15% Similarity=0.127 Sum_probs=132.6
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc--CceEEeec
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--NLWLAAEN 668 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l--~l~liaen 668 (844)
.|+|+||+||||++. ...+++++.++|++|.+ .|+.|+++|||+...+..+...+ ...++++|
T Consensus 3 iKli~~D~DGTL~~~--------------~~~i~~~~~~al~~l~~-~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~ 67 (225)
T d1l6ra_ 3 IRLAAIDVDGNLTDR--------------DRLISTKAIESIRSAEK-KGLTVSLLSGNVIPVVYALKIFLGINGPVFGEN 67 (225)
T ss_dssp CCEEEEEHHHHSBCT--------------TSCBCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGG
T ss_pred eEEEEEecCCCCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCchhhhHHHHHHcCCCceEEeec
Confidence 589999999999976 35688999999999998 59999999999999888777665 45789999
Q ss_pred ceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceE-eeccceEEEEeecCChhhhHHHHHHHHHHHhcCCCC
Q 003145 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHF-EQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPIS 747 (844)
Q Consensus 669 G~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~i-E~k~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~ 747 (844)
|+.+...++.-.... .. +.+...++....+..-..+ ..+.....+.+. .+++ +...+.+.+ .
T Consensus 68 G~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~-~---- 130 (225)
T d1l6ra_ 68 GGIMFDNDGSIKKFF----SN---EGTNKFLEEMSKRTSMRSILTNRWREASTGFD-IDPE----DVDYVRKEA-E---- 130 (225)
T ss_dssp GTEEECTTSCEEESS----CS---HHHHHHHHHHTTTSSCBCCGGGGGCSSSEEEB-CCGG----GHHHHHHHH-H----
T ss_pred ceEEEeCCccEEEec----Ch---HHHHHHHHHHHHhcCcceeecccceeeeeccc-cCHH----HHHHHHHHH-h----
Confidence 998875433211121 11 2233344433332211111 111111111111 1222 122333333 1
Q ss_pred CCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcchh
Q 003145 748 NASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSLSK 821 (844)
Q Consensus 748 ~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~a~ 821 (844)
...+.+..+...+||.|+++|||.|+++|+++++ ++++.+++||| +.|| ||+ +++|+|+|+.+++.+
T Consensus 131 ~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~------i~~~~v~~~GD-s~nD~~m~~~a~~~vav~na~~~~k~ 201 (225)
T d1l6ra_ 131 SRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYS------LEYDEILVIGD-SNNDMPMFQLPVRKACPANATDNIKA 201 (225)
T ss_dssp TTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTT------CCGGGEEEECC-SGGGHHHHTSSSEEEECTTSCHHHHH
T ss_pred hcCcEEEECCcEEEecCCccchHHHHHHHhhhhc------cchhheeeecC-CcchHHHHHHCCeEEEECCCcHHHHH
Confidence 2357788888999999999999999999999999 78899999999 9999 999 899999999876533
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.80 E-value=1.1e-19 Score=186.40 Aligned_cols=204 Identities=15% Similarity=0.082 Sum_probs=130.2
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC--ceEEeec
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--l~liaen 668 (844)
.|+|++|+||||++.. .+++++++|++|.+ .|+.|+++|||++..+..++..++ .++|++|
T Consensus 2 iKli~~DlDGTLl~~~----------------~~~~~~~ai~~l~~-~G~~~~~aTGR~~~~~~~~~~~~~~~~~~i~~n 64 (243)
T d1wzca1 2 IRLIFLDIDKTLIPGY----------------EPDPAKPIIEELKD-MGFEIIFNSSKTRAEQEYYRKELEVETPFISEN 64 (243)
T ss_dssp EEEEEECCBTTTBSSS----------------CSGGGHHHHHHHHH-TTEEEEEECSSCHHHHHHHHHHHTCCSCEEETT
T ss_pred cEEEEEeCCCCCCCCC----------------CCHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHhcccccccccC
Confidence 4899999999999652 24678999999998 599999999999999999999984 4799999
Q ss_pred ceEEEecCCeee-eccc--------ccCChHHHHHHHHHHH---HHHhcCCCceE-------------------eeccce
Q 003145 669 GMFLRCTTGKWM-TTMP--------EHLNMEWVDSLKHVFE---YFTERTPRSHF-------------------EQRETS 717 (844)
Q Consensus 669 G~~i~~~~~~w~-~~~~--------~~~~~~w~~~v~~i~~---~~~~rt~gs~i-------------------E~k~~s 717 (844)
|+.+...++.+. .... ......+ +.+...+. ........... ..+...
T Consensus 65 Ga~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (243)
T d1wzca1 65 GSAIFIPKGYFPFDVKGKEVGNYIVIELGIRV-EKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREYS 143 (243)
T ss_dssp TTEEEECTTCCC----------CEEEECSCCH-HHHHHHHHHHHHHHTCBCGGGSCHHHHHHHHCCCGGGHHHHTCCSSE
T ss_pred CcEEEcCCCceecccchhHHHHHHHHHHhhhH-HHHHHHHHhhhhhcccchhhhhhHHHHHHhhcCchhHHHHHHhhhcc
Confidence 999886332210 0000 0000011 11212221 11111000000 000011
Q ss_pred EEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEe
Q 003145 718 LVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797 (844)
Q Consensus 718 l~~hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiG 797 (844)
....... ... ..+.... ..+.+..+ ..+++.|.+++||.|++.++++++. ++.++++|||
T Consensus 144 ~~~~~~~-~~~-----~~~~~~~--------~~~~~~~~-~~~~~~~~~~~K~~al~~l~~~~~~-----~~~~~~~a~G 203 (243)
T d1wzca1 144 ETIFEWS-RDG-----WEEVLVE--------GGFKVTMG-SRFYTVHGNSDKGKAAKILLDFYKR-----LGQIESYAVG 203 (243)
T ss_dssp EEECBCS-SSC-----HHHHHHH--------TTCEEEEC-SSSEEEECSCCHHHHHHHHHHHHHT-----TSCEEEEEEE
T ss_pred hhhhhhh-hHH-----HHHhhhh--------cCeEEeec-ccccchhhhhccHHHHHHHHHHhcC-----CCcccEEEEc
Confidence 1111000 000 0111111 13445544 3478999999999999999999852 5678999999
Q ss_pred eCCCch--hhc--cCcEEEeCCCCcchhhhcCCHHHHHHHH
Q 003145 798 HFLGKV--LLT--QFLIQVGSSINSLSKEKKRKVHQLFGIF 834 (844)
Q Consensus 798 D~~~nD--Mf~--g~~Iavgna~~~~a~~~l~~~~~v~~~l 834 (844)
| +.|| ||+ +++|+|||+.+++.+ ++++..|+.+.+
T Consensus 204 D-~~ND~~Ml~~a~~~va~~Na~~~~~~-~~~~i~~~~~~i 242 (243)
T d1wzca1 204 D-SYNDFPMFEVVDKVFIVGSLKHKKAQ-NVSSIIDVLEVI 242 (243)
T ss_dssp C-SGGGHHHHTTSSEEEEESSCCCTTCE-EESCHHHHHHHH
T ss_pred C-CHhHHHHHHcCCcEEEeCCCChHHHh-hhhHHHHHHHhh
Confidence 9 9999 999 899999999887644 799999988766
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.78 E-value=1.1e-18 Score=177.08 Aligned_cols=193 Identities=15% Similarity=0.145 Sum_probs=121.0
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC---ceEEee
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN---LWLAAE 667 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~---l~liae 667 (844)
..|||+|+||||++. ...++++++++|++|.+ .|+.++++|||+...+.+.+..++ .++|++
T Consensus 4 ~~li~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~Gi~~~i~TGR~~~~~~~~~~~~~~~~~~~i~~ 68 (232)
T d1xvia_ 4 PLLVFSDLDGTLLDS--------------HSYDWQPAAPWLTRLRE-ANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAE 68 (232)
T ss_dssp CEEEEEECTTTTSCS--------------SCCSCCTTHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEG
T ss_pred CEEEEEECCCCccCC--------------cCcCCHHHHHHHHHHHH-CCCEEEEEeCCChhhchhHHHHhccCCceEEcc
Confidence 458999999999976 34578899999999998 599999999999999999999873 569999
Q ss_pred cceEEEecCC-eeeeccc---ccCChHHHHHHHHHHHHHHhcCCCceEee----------------------ccceEEEE
Q 003145 668 NGMFLRCTTG-KWMTTMP---EHLNMEWVDSLKHVFEYFTERTPRSHFEQ----------------------RETSLVWN 721 (844)
Q Consensus 668 nG~~i~~~~~-~w~~~~~---~~~~~~w~~~v~~i~~~~~~rt~gs~iE~----------------------k~~sl~~h 721 (844)
||+.+..... ......+ ......+............. ........ ........
T Consensus 69 nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
T d1xvia_ 69 NGAVIQLAEQWQEIDGFPRIISGISHGEISLVLNTLREKEH-FKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLI 147 (232)
T ss_dssp GGTEEECCTTCTTSTTTTEEECSSCHHHHHHHHHHHHHHHC-CCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEE
T ss_pred CCeEEEecCCccccchhhhhhhHHHHHHHHHhhhhhhhhhc-cccccccchhhhhhhhhhcccchhhhhhhhcceeeeec
Confidence 9999985221 1000000 11121111111111111100 00000000 00000000
Q ss_pred eecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHh---cccCcCCCCCceEEEEee
Q 003145 722 YKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEI---VHSKKMKTAIDYVLCIGH 798 (844)
Q Consensus 722 y~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l---~~~~~~~~~~d~vlaiGD 798 (844)
.. ... .......... . .....+..+...+++.|++++||.|++.|++.+ + ++.++++||||
T Consensus 148 ~~-~~~----~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~K~~~~~~l~~~~~~l~------i~~~~~iafGD 211 (232)
T d1xvia_ 148 WR-DSD----ERMAQFTARL-N----ELGLQFMQGARFWHVLDASAGKDQAANWIIATYQQLS------GKRPTTLGLGD 211 (232)
T ss_dssp EC-SCH----HHHHHHHHHH-H----HTTEEEEECSSCEEEEETTCCHHHHHHHHHHHHHHHH------SSCCEEEEEES
T ss_pred cc-ccH----HHHHHHHHHh-h----hccceeeeccceeeccCCCchHHHHHHHHHHHHHHcC------CChhcEEEEcC
Confidence 00 010 1111222222 1 123456667778999999999999999999854 5 67899999999
Q ss_pred CCCch--hhc--cCcEEEeCCC
Q 003145 799 FLGKV--LLT--QFLIQVGSSI 816 (844)
Q Consensus 799 ~~~nD--Mf~--g~~Iavgna~ 816 (844)
+.|| ||+ ++||+|.||.
T Consensus 212 -~~NDl~Ml~~a~~~vaV~n~~ 232 (232)
T d1xvia_ 212 -GPNDAPLLEVMDYAVIVKGLN 232 (232)
T ss_dssp -SGGGHHHHHTSSEEEECCCCC
T ss_pred -CHhHHHHHHhCCeEEEEeCCC
Confidence 9999 999 8999999973
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=8e-18 Score=171.12 Aligned_cols=201 Identities=21% Similarity=0.210 Sum_probs=112.5
Q ss_pred eEEE-EecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHH-hhccc-----CceE
Q 003145 592 RLLI-LGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDK-NFQEY-----NLWL 664 (844)
Q Consensus 592 rLi~-lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~-~~~~l-----~l~l 664 (844)
|+|+ ||+||||+++ +.+++++++++|++|++ .|. ++++|||....... +...+ ..++
T Consensus 1 k~i~lFDlDGTLl~~--------------~~~is~~~~~~i~~l~~-~g~-~~i~tgrr~~~~~~~~~~~~~~~~~~~~~ 64 (244)
T d2fuea1 1 RVLCLFDVDGTLTPA--------------RQKIDPEVAAFLQKLRS-RVQ-IGVVGGSDYCKIAEQLGDGDEVIEKFDYV 64 (244)
T ss_dssp CEEEEEESBTTTBST--------------TSCCCHHHHHHHHHHTT-TSE-EEEECSSCHHHHHHHHSSTTTHHHHCSEE
T ss_pred CEEEEEccccCccCC--------------CCcCCHHHHHHHHHHHh-CCC-EEEEecCChhhhhhhhhhhhcccccccee
Confidence 4555 6999999987 35689999999999987 465 56667776655444 44433 3578
Q ss_pred EeecceEEEecCCe-eeecccccCChHHHHHHHHH-HHHHHhcCC----CceEeeccceEEEEeecCCh------hhhH-
Q 003145 665 AAENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHV-FEYFTERTP----RSHFEQRETSLVWNYKYADV------EFGR- 731 (844)
Q Consensus 665 iaenG~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i-~~~~~~rt~----gs~iE~k~~sl~~hy~~~d~------e~~~- 731 (844)
++.||+++...+.. |...+............... ......... ..+.........++...... ++..
T Consensus 65 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (244)
T d2fuea1 65 FAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSEL 144 (244)
T ss_dssp EEGGGTEEEETTEECCCCCHHHHHCHHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCCHHHHHHHHHH
T ss_pred ecccceeeccCCccceeechhHHHhhhHHHHHHhhhhhhhheecccccccchhhhhhhhhhccccccccchhhhhhhhhh
Confidence 99999998864332 22211111111111111111 111111111 11111122222232221111 0000
Q ss_pred ----HHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCC----Cc
Q 003145 732 ----IQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL----GK 802 (844)
Q Consensus 732 ----~qa~el~~~L~~~~~~~~~~~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~----~n 802 (844)
....+....+... .......+. .+..++||.|+++|||.|++.|++ ++.++|++||| + .|
T Consensus 145 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lei~~~~vsKg~al~~L~~---------~~~~ev~afGD-~~~~G~N 213 (244)
T d2fuea1 145 DKKEKIREKFVEALKTE-FAGKGLRFSRGGMISFDVFPEGWDKRYCLDSLDQ---------DSFDTIHFFGN-ETSPGGN 213 (244)
T ss_dssp HHHHCHHHHHHHHHHHH-TTTSCEEEECCSSSCEEEEETTCSTTHHHHHHTT---------SCCSEEEEEES-CCSTTST
T ss_pred ccchhhHHHHHHHHHHH-hhccceeEeeccCccceecchhccHHHHHHHHhc---------CChhhEEEEcC-CCCCCCC
Confidence 0111222222122 122334444 577899999999999999999875 35899999999 5 48
Q ss_pred h--hhc--c-CcEEEeCCCCcc
Q 003145 803 V--LLT--Q-FLIQVGSSINSL 819 (844)
Q Consensus 803 D--Mf~--g-~~Iavgna~~~~ 819 (844)
| ||+ + .+++|+||.+++
T Consensus 214 D~eml~~a~~~~~av~na~~~~ 235 (244)
T d2fuea1 214 DFEIFADPRTVGHSVVSPQDTV 235 (244)
T ss_dssp THHHHHSTTSEEEECSSHHHHH
T ss_pred cHHHHHcCCCcEEEcCCHHHHH
Confidence 8 998 5 599999987654
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.71 E-value=2.1e-17 Score=160.78 Aligned_cols=144 Identities=19% Similarity=0.227 Sum_probs=114.7
Q ss_pred CcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEE
Q 003145 363 RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 442 (844)
Q Consensus 363 ~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~ 442 (844)
..++|+|||+++.||+..+++|++++ |+.+ |+++|.++ +.+.++.+.+++.+. .. ..|+
T Consensus 12 ~~~~l~iGrl~~~K~~~~~i~a~~~l----~~~~----l~ivg~~~--~~~~~~~~~~~~~~~----~~-------~~v~ 70 (166)
T d2f9fa1 12 GDFWLSVNRIYPEKRIELQLEVFKKL----QDEK----LYIVGWFS--KGDHAERYARKIMKI----AP-------DNVK 70 (166)
T ss_dssp CSCEEEECCSSGGGTHHHHHHHHHHC----TTSC----EEEEBCCC--TTSTHHHHHHHHHHH----SC-------TTEE
T ss_pred CCEEEEEecCccccCHHHHHHHHHHh----cCCe----EEEEEecc--cccchhhhhhhhccc----cc-------CcEE
Confidence 35688999999999999999999765 4443 67676543 234444555444332 11 1367
Q ss_pred EeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHH
Q 003145 443 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANA 520 (844)
Q Consensus 443 ~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~a 520 (844)
+ .|.++.+++..+|+.||++++||..||+|++++|||+|| .|+|+|..+|..+.+ +.+|+++++ |+++++++
T Consensus 71 ~-~g~~~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~~~g----~pvi~s~~~~~~e~i~~~~~g~~~~~-d~~~~~~~ 144 (166)
T d2f9fa1 71 F-LGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASG----KPVIAVNEGGFKETVINEKTGYLVNA-DVNEIIDA 144 (166)
T ss_dssp E-EESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTT----CCEEEESSHHHHHHCCBTTTEEEECS-CHHHHHHH
T ss_pred E-eeccccccccccccccccccccccccccccccccccccc----ccceeecCCcceeeecCCcccccCCC-CHHHHHHH
Confidence 5 689999999999999999999999999999999999996 899999999998877 567888865 89999999
Q ss_pred HHHHhcCCHHHHH
Q 003145 521 IARALNMSPEERE 533 (844)
Q Consensus 521 i~~aL~m~~~er~ 533 (844)
|.+++++++.-++
T Consensus 145 i~~l~~~~~~~~~ 157 (166)
T d2f9fa1 145 MKKVSKNPDKFKK 157 (166)
T ss_dssp HHHHHHCTTTTHH
T ss_pred HHHHHhCHHHHHH
Confidence 9999998754433
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.71 E-value=7.2e-17 Score=164.28 Aligned_cols=199 Identities=17% Similarity=0.182 Sum_probs=113.2
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc----CceEE
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY----NLWLA 665 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l----~l~li 665 (844)
..||++||+||||+++ ..+++++++++|++|++ +..++++|||+...+...+... ..+++
T Consensus 2 ~~kl~~fDlDGTLl~~--------------~~~i~~~~~~al~~l~~--~g~~~i~Tgr~~~~~~~~~~~~~~~~~~~~~ 65 (243)
T d2amya1 2 GPALCLFDVDGTLTAP--------------RQKITKEMDDFLQKLRQ--KIKIGVVGGSDFEKVQEQLGNDVVEKYDYVF 65 (243)
T ss_dssp CSEEEEEESBTTTBCT--------------TSCCCHHHHHHHHHHTT--TSEEEEECSSCHHHHHHHHCTTHHHHCSEEE
T ss_pred CCEEEEEcCcCCeeCC--------------CCcCCHHHHHHHHHHHc--CCCEEEEcCCChHHhHHHHhhhccccceEEe
Confidence 4689999999999986 36789999999999976 4468899999998888777765 34566
Q ss_pred eecceEEEecCCe-eeecccccCChHHHHHHHHHHHHHHhcCCC-----ceEeeccceEEEEeecCC--hhhh-------
Q 003145 666 AENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERTPR-----SHFEQRETSLVWNYKYAD--VEFG------- 730 (844)
Q Consensus 666 aenG~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~rt~g-----s~iE~k~~sl~~hy~~~d--~e~~------- 730 (844)
+.||+++...++. +...++.................+...+.. ...+.......+...... ....
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (243)
T d2amya1 66 PENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELD 145 (243)
T ss_dssp SGGGTEEEETTEEEEECCHHHHHCHHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHH
T ss_pred cCcEEEEecCCccceecchhHHHHHHHHHHHHhhhhhhheeccccccccchhhhhhhhhcccccccccchhhhhhhhhhh
Confidence 6677776654333 322221111111111111111111111111 111222222222222111 1100
Q ss_pred --HHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeC---CCch-
Q 003145 731 --RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF---LGKV- 803 (844)
Q Consensus 731 --~~qa~el~~~L~~~~~~~~~~~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~---~~nD- 803 (844)
.....+....+ ........+.+. .+..++||.|+++|||.|+++|+ + ++.+++++|||. +.||
T Consensus 146 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lei~~~~vsKg~al~~l~---~------~~~~ev~afGD~~~~g~NDi 215 (243)
T d2amya1 146 KKENIRQKFVADL-RKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHVE---N------DGYKTIYFFGDKTMPGGNDH 215 (243)
T ss_dssp HHHCHHHHHHHHH-HHHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGTT---T------SCCSEEEEEECSCC---CCC
T ss_pred cchhhhHHHHHHH-HHHhcccceEEEecCCccceeeccccCHHHHHHHHh---C------CCcceEEEEcCCCCCCCCcH
Confidence 01112333333 222233345554 57889999999999999999885 3 468999999992 3588
Q ss_pred -hhc--c-CcEEEeC
Q 003145 804 -LLT--Q-FLIQVGS 814 (844)
Q Consensus 804 -Mf~--g-~~Iavgn 814 (844)
||+ | .+++|+|
T Consensus 216 ~Ml~~~g~~~~~v~~ 230 (243)
T d2amya1 216 EIFTDPRTMGYSVTA 230 (243)
T ss_dssp HHHHCTTEEEEECSS
T ss_pred HHHHccCCcEEEeCC
Confidence 999 4 3555544
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.13 E-value=9.1e-13 Score=130.09 Aligned_cols=73 Identities=11% Similarity=0.046 Sum_probs=58.3
Q ss_pred EeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcchh----h-hcCCHHHHHHH
Q 003145 763 RAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSLSK----E-KKRKVHQLFGI 833 (844)
Q Consensus 763 ~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~a~----~-~l~~~~~v~~~ 833 (844)
.....+|+.....+++.++ ++.++|+|||| +.|| ||+ |+|||| |+.+.+.+ + -.++.+++.+.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~------i~~~eviaiGD-g~NDi~Ml~~Ag~gIAm-na~~~v~~~~~~~~~~~~~~d~~~~ 195 (206)
T d1rkua_ 124 VGYQLRQKDPKRQSVIAFK------SLYYRVIAAGD-SYNDTTMLSEAHAGILF-HAPENVIREFPQFPAVHTYEDLKRE 195 (206)
T ss_dssp EEEECCSSSHHHHHHHHHH------HTTCEEEEEEC-SSTTHHHHHHSSEEEEE-SCCHHHHHHCTTSCEECSHHHHHHH
T ss_pred ccccccchhhHHHHHHHhc------ccccceEEecC-CccCHHHHHhCCccEEE-CCCHHHHHhCCCceeecCHHHHHHH
Confidence 3445567777888888888 67899999999 9999 999 999999 66554433 3 26789999999
Q ss_pred HHHHhhccCC
Q 003145 834 FLRFSYSGVQ 843 (844)
Q Consensus 834 l~~~~~~~~~ 843 (844)
|...+.++..
T Consensus 196 ~~~~~~~~~~ 205 (206)
T d1rkua_ 196 FLKASSRSLS 205 (206)
T ss_dssp HHHHCSSCCC
T ss_pred HHHHhhCccc
Confidence 9888888764
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.46 E-value=1.9e-07 Score=90.43 Aligned_cols=68 Identities=7% Similarity=-0.098 Sum_probs=52.0
Q ss_pred CCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcch---hhhc---CCHHHHHHHH
Q 003145 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSLS---KEKK---RKVHQLFGIF 834 (844)
Q Consensus 765 ~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~a---~~~l---~~~~~v~~~l 834 (844)
...+|..+++.++++++ ++++.|++||| +.|| ||+ +++++|+||.+++. ++-+ .+...|..+.
T Consensus 77 ~~~~K~~~l~~~~~~~~------i~~~~v~~vGD-d~nDl~~l~~~g~siap~nA~~~vk~~A~~Vt~~~GG~GavrE~~ 149 (177)
T d1k1ea_ 77 GKLEKETACFDLMKQAG------VTAEQTAYIGD-DSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMS 149 (177)
T ss_dssp SCSCHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHH
T ss_pred ccccHHHHHHHHHHHhc------CCcceeEEecC-CccHHHHHhhCCeEEEcCCccHHHHHhCCEEeCCCCCCchHHHHH
Confidence 34679999999999998 78999999999 9999 888 99999999977543 3333 3333555565
Q ss_pred HHHhh
Q 003145 835 LRFSY 839 (844)
Q Consensus 835 ~~~~~ 839 (844)
++|+.
T Consensus 150 e~il~ 154 (177)
T d1k1ea_ 150 DMILQ 154 (177)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.22 E-value=9.5e-07 Score=85.86 Aligned_cols=58 Identities=10% Similarity=0.052 Sum_probs=46.7
Q ss_pred EEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCc---chhhhcCC
Q 003145 761 EVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINS---LSKEKKRK 826 (844)
Q Consensus 761 EV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~---~a~~~l~~ 826 (844)
+....+..|+.++..+++.++ ++++.+++||| +.|| |++ |++|+| |+.+. .|++.+++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~i~iGD-s~nDi~m~~~ag~~va~-na~~~lk~~Ad~vi~~ 199 (210)
T d1j97a_ 135 GEVLKENAKGEILEKIAKIEG------INLEDTVAVGD-GANDISMFKKAGLKIAF-CAKPILKEKADICIEK 199 (210)
T ss_dssp CSSCSTTHHHHHHHHHHHHHT------CCGGGEEEEES-SGGGHHHHHHCSEEEEE-SCCHHHHTTCSEEECS
T ss_pred ccccccccccchhhhHHHHhc------ccccceEEecC-CcChHHHHHHCCCCEEE-CCCHHHHHhCCEEEcC
Confidence 334567889999999999988 78899999999 9999 998 999999 88664 44555554
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=97.97 E-value=1.2e-06 Score=87.14 Aligned_cols=65 Identities=9% Similarity=0.099 Sum_probs=47.3
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcchhh-----hcCCHHHHHHHHHHHh
Q 003145 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSLSKE-----KKRKVHQLFGIFLRFS 838 (844)
Q Consensus 768 nKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~a~~-----~l~~~~~v~~~l~~~~ 838 (844)
+|+.++..+++.++ .+++.++++|| +.+| |.+ ++++++++..+...+. .+++-.++...|+.+.
T Consensus 145 ~k~~~~~~~~~~~~------~~~~~~i~iGD-s~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~ 217 (226)
T d2feaa1 145 QCGCCKPSVIHELS------EPNQYIIMIGD-SVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKEIENVK 217 (226)
T ss_dssp CCSSCHHHHHHHHC------CTTCEEEEEEC-CGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHHHHTSH
T ss_pred CCHHHHHHHHHHhc------CCCceEEEEeC-chhhHHHHHHCCEEEEecchHHHHHHcCCCeeecCCHHHHHHHHHHHH
Confidence 56666777788887 67899999999 9999 776 7888888754333222 3567777777776664
Q ss_pred h
Q 003145 839 Y 839 (844)
Q Consensus 839 ~ 839 (844)
+
T Consensus 218 ~ 218 (226)
T d2feaa1 218 E 218 (226)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=97.69 E-value=6.2e-06 Score=83.96 Aligned_cols=58 Identities=16% Similarity=0.189 Sum_probs=43.6
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEc---CCChhhHHHhhcccCc
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQEYNL 662 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~l~l 662 (844)
.+.|+|+||+||||.+.. ..+ +.+.++|++|.+ .|..++++| +|+...+.+.+..+++
T Consensus 5 ~~ik~vlFDlDGTL~~~~--------------~~i-~~a~e~l~~l~~-~g~~~~~~TN~~~~~~~~~~~~~~~~g~ 65 (261)
T d1vjra_ 5 DKIELFILDMDGTFYLDD--------------SLL-PGSLEFLETLKE-KNKRFVFFTNNSSLGAQDYVRKLRNMGV 65 (261)
T ss_dssp GGCCEEEECCBTTTEETT--------------EEC-TTHHHHHHHHHH-TTCEEEEEESCTTSCHHHHHHHHHHTTC
T ss_pred HhCCEEEEeCCCeeEECC--------------ccC-chHHHHHHHHHH-cCCCEEEEeCCCCCCHHHHHHHHHhhcc
Confidence 367999999999999762 223 567889999987 599999998 5666666666665554
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=97.59 E-value=3.6e-05 Score=70.99 Aligned_cols=61 Identities=16% Similarity=0.121 Sum_probs=45.3
Q ss_pred HhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCCh
Q 003145 587 LRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (844)
Q Consensus 587 ~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~ 650 (844)
..++.|.|+||+||||+...... ..+...-....+-+.++++|+.|.+ .|..|+++|||+.
T Consensus 3 ~~~kpk~vifDiDgTL~~~~~~~--~~~~~~~~~~~~~p~v~~~l~~l~~-~G~~Iii~T~R~~ 63 (149)
T d1ltqa1 3 TPGKPKAVIFDVDGTLAKMNGRG--PYDLEKCDTDVINPMVVELSKMYAL-MGYQIVVVSGRES 63 (149)
T ss_dssp CTTSCEEEEEETBTTTBCCSSCC--TTCGGGGGGCCBCHHHHHHHHHHHH-TTCEEEEEECSCC
T ss_pred CCCCCcEEEEEcCCCcEeCCCCC--cCCccccccCccCHHHHHHHHHHHh-ccCeEEEEecCcH
Confidence 35788999999999999764321 0111111345788999999999998 6999999999973
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.58 E-value=9.6e-05 Score=72.98 Aligned_cols=41 Identities=17% Similarity=0.395 Sum_probs=32.8
Q ss_pred cCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
..+.|.+.++|+.|.+ .|.+++|+||-....++.+++.+++
T Consensus 81 ~~l~pg~~~~i~~lk~-~G~~~~ivS~~~~~~v~~i~~~lgi 121 (217)
T d1nnla_ 81 PHLTPGIRELVSRLQE-RNVQVFLISGGFRSIVEHVASKLNI 121 (217)
T ss_dssp CCBCTTHHHHHHHHHH-TTCEEEEEEEEEHHHHHHHHHHTTC
T ss_pred cccCHHHHHHHHHHHh-CCCEEEEECCCchHHHHHHHHHhCC
Confidence 3466888899999888 4889999998888888888777654
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=97.53 E-value=1.5e-05 Score=80.65 Aligned_cols=51 Identities=8% Similarity=0.147 Sum_probs=38.3
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCC---hhhHHHhh
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD---RNVLDKNF 657 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~---~~~l~~~~ 657 (844)
.+.++||+||||.+.. ..+ +.+.++|++|.+ .|..++++|+++ ...+.+.+
T Consensus 2 yk~v~fDlDGTL~~~~--------------~~i-~~a~~~i~~l~~-~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 2 YQGYLIDLDGTIYLGK--------------EPI-PAGKRFVERLQE-KDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp CCEEEECCBTTTEETT--------------EEC-HHHHHHHHHHHH-TTCCEEEEECCCSSCHHHHHHHH
T ss_pred CCEEEEcCCCccEeCC--------------CcC-ccHHHHHHHHHH-CCCCEEEEeCCCCCCHHHHHHHH
Confidence 5789999999999762 224 678999999998 499999997554 44444433
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=97.26 E-value=0.00013 Score=65.35 Aligned_cols=59 Identities=20% Similarity=0.236 Sum_probs=44.8
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHH---HhhcccCc
Q 003145 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD---KNFQEYNL 662 (844)
Q Consensus 593 Li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~---~~~~~l~l 662 (844)
-|++|+||||+... .+ ...+|-+.+++.|++|.+ .|+.|+|.|+|+....+ +|+...++
T Consensus 2 ti~vDiDGTl~~~~-~~---------~~~kPi~~~Ie~l~~L~~-~G~~IIi~TaR~~~~~~~t~~wL~~~~i 63 (122)
T d2obba1 2 TIAVDFDGTIVEHR-YP---------RIGEEIPFAVETLKLLQQ-EKHRLILWSVREGELLDEAIEWCRARGL 63 (122)
T ss_dssp EEEECCBTTTBCSC-TT---------SCCCBCTTHHHHHHHHHH-TTCEEEECCSCCHHHHHHHHHHHHTTTC
T ss_pred EEEEEcCCCcCCCC-CC---------ccccccHHHHHHHHHHHH-CCCeEEEEecCCCcchHHHHHHHHHcCC
Confidence 37999999998753 22 235677899999999998 59999999999876554 55555344
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.15 E-value=0.00028 Score=63.19 Aligned_cols=49 Identities=18% Similarity=0.232 Sum_probs=39.5
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCC
Q 003145 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (844)
Q Consensus 592 rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~ 649 (844)
|-|+||+||||+...+.- -....|-+.+++.|.+|.+ .|+.++|.|+|.
T Consensus 2 K~i~~DiDGTI~~~~~~~--------y~~~~P~~~~Ie~l~~l~~-~G~~Iii~TaR~ 50 (124)
T d1xpja_ 2 KKLIVDLDGTLTQANTSD--------YRNVLPRLDVIEQLREYHQ-LGFEIVISTARN 50 (124)
T ss_dssp CEEEECSTTTTBCCCCSC--------GGGCCBCHHHHHHHHHHHH-TTCEEEEEECTT
T ss_pred CEEEEeCCCCeECCCCCC--------cCccCcCHHHHHHHHHHHH-CCCEEEEEecCC
Confidence 458999999998753210 0356788999999999988 599999999996
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=96.71 E-value=0.00023 Score=71.75 Aligned_cols=52 Identities=6% Similarity=0.115 Sum_probs=39.6
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcC---CChhhHHHhhc
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKNFQ 658 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SG---R~~~~l~~~~~ 658 (844)
.|.|+||+||||.+.. . +-+...++|++|.+ .|..++++|+ |+...+.+.+.
T Consensus 2 yk~vlFDlDGTL~~~~--------------~-~i~~a~e~l~~l~~-~g~~~~~~TN~s~~~~~~~~~~l~ 56 (253)
T d1wvia_ 2 YKGYLIDLDGTIYKGK--------------D-RIPAGEDFVKRLQE-RQLPYILVTNNTTRTPEMVQEMLA 56 (253)
T ss_dssp CCEEEEECBTTTEETT--------------E-ECHHHHHHHHHHHH-HTCCEEEEECCCSSCHHHHHHHHH
T ss_pred cCEEEEcCcCceEECC--------------C-cCccHHHHHHHHHH-CCCCEEEEeCCCCCCHHHHHHHHH
Confidence 5789999999998752 2 33778899999987 5899999975 55566666554
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=96.29 E-value=0.0015 Score=65.39 Aligned_cols=56 Identities=14% Similarity=0.236 Sum_probs=44.0
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEc---CCChhhHHHhhcccC
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQEYN 661 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~l~ 661 (844)
+.|.|+||+||||.+.. ..+ +...++|+.|.+ .|..|+++| +|+...+.+.+..++
T Consensus 2 ~ik~VifDlDGTL~~~~--------------~~i-~~a~e~i~~l~~-~g~~~~~~TN~~~~~~~~~~~~l~~~G 60 (250)
T d2c4na1 2 TIKNVICDIDGVLMHDN--------------VAV-PGAAEFLHGIMD-KGLPLVLLTNYPSQTGQDLANRFATAG 60 (250)
T ss_dssp CCCEEEEECBTTTEETT--------------EEC-TTHHHHHHHHHH-TTCCEEEEESCCSCCHHHHHHHHHHTT
T ss_pred CCCEEEEECCCeeEECC--------------CcC-ccHHHHHHHHHH-CCCcEEEEeCCCCCCHHHHHHHHhhcc
Confidence 47899999999999762 223 467889999987 599999987 778888877776654
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.25 E-value=0.0025 Score=59.42 Aligned_cols=61 Identities=15% Similarity=0.133 Sum_probs=40.7
Q ss_pred CeEEEEecCCccCCCCCCCCC-------CCcc---ccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhh
Q 003145 591 NRLLILGFNATLTEPVDTPGR-------RGDQ---IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 652 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~-------~~~~---~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~ 652 (844)
.|+|+||+||||.+....... .... ......++-|.+.++|+.|.+ .|..++|+|+.+...
T Consensus 5 pK~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~pgv~e~L~~L~~-~G~~~~v~S~~~~~~ 75 (164)
T d1u7pa_ 5 PKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQS-LGVPVAAASRTSEIQ 75 (164)
T ss_dssp CSEEEECCBTTTBSSCTTTTCCSCEEECTTSCEEETTCCEECCCTTHHHHHHHHHH-TTCCEEEEECCSCHH
T ss_pred CCEEEEcCCCcccCCccccccCccHhHHhcchHhhhhccccccchHHHHHHHHHHH-CCCcEEEEeccccch
Confidence 589999999999864211100 0000 001224567889999999998 599999999876543
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.22 E-value=0.015 Score=52.32 Aligned_cols=58 Identities=19% Similarity=0.211 Sum_probs=48.0
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
-..+++|-+||++-...+ .+.++..++++.|.+ .|..|+++||..........+.+++
T Consensus 3 ~~~~~~d~~~~~~~g~~D-------------~lr~~a~~~I~~L~~-~Gi~v~ilTGD~~~~a~~ia~~lgI 60 (135)
T d2b8ea1 3 VTAVIFDKTGTLTKGKPD-------------TLKESAKPAVQELKR-MGIKVGMITGDNWRSAEAISRELNL 60 (135)
T ss_dssp CCEEEEECCCCCBCSCCC-------------CBCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHHTC
T ss_pred EEEEEECCceEEEEecCC-------------CCCccHHHHHHHHHH-cCCEEEEEcCcchhhhhHHHhhhhh
Confidence 357999999999865333 367889999999987 5999999999999999888887664
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=95.72 E-value=0.0047 Score=57.58 Aligned_cols=55 Identities=18% Similarity=0.249 Sum_probs=39.2
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCC
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~ 649 (844)
+|.||||.||||....... ..... -....+-|.+.++|++|.+ .|.+++|+|..+
T Consensus 2 ~K~i~~D~DGtL~~~~~~~-~~~~~--~~~~~~~pgv~e~L~~L~~-~g~~l~i~TNq~ 56 (161)
T d2fpwa1 2 QKYLFIDRDGTLISEPPSD-FQVDR--FDKLAFEPGVIPQLLKLQK-AGYKLVMITNQD 56 (161)
T ss_dssp CEEEEECCBTTTBCCC--C-CCCCS--GGGCCBCTTHHHHHHHHHH-TTEEEEEEEECT
T ss_pred CcEEEEeCCCCeEeeCCCC-CccCC--HHHceECccHHHHHHHHHH-cCCceeeecccc
Confidence 6899999999999764211 00111 1234677899999999998 599999998763
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=94.88 E-value=0.0093 Score=57.86 Aligned_cols=40 Identities=15% Similarity=0.178 Sum_probs=31.4
Q ss_pred CCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC
Q 003145 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (844)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (844)
.+-|.+.++|++|++.++..++|+||.+...+...+..++
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~g 130 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPG 130 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTT
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhc
Confidence 3456788999999875447888999999988888887654
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=94.84 E-value=0.01 Score=56.85 Aligned_cols=39 Identities=18% Similarity=0.342 Sum_probs=33.3
Q ss_pred CCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC
Q 003145 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (844)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (844)
.+-+.+.+.|..|++ .|.+++|+||.+...++..+..++
T Consensus 95 ~l~~~~~~~L~~L~~-~g~~~~i~tn~~~~~~~~~l~~~g 133 (224)
T d2hsza1 95 RLYPNVKETLEALKA-QGYILAVVTNKPTKHVQPILTAFG 133 (224)
T ss_dssp EECTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTT
T ss_pred chHHHHHHHHHHHhc-cCCcccccccccHHHHHHHHHhcC
Confidence 356789999999988 599999999999999988887754
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=94.38 E-value=0.019 Score=54.16 Aligned_cols=53 Identities=9% Similarity=0.080 Sum_probs=40.4
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCCh
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~ 650 (844)
.+.||||.||||........ + ..+-++-+.+.++|+.|.+ .|..++|+|..+.
T Consensus 2 ~~Av~~DrDGtl~~~~~y~~----~--~~~~~~~~gv~e~l~~L~~-~g~~~~ivTNq~~ 54 (182)
T d2gmwa1 2 VPAIFLDRDGTINVDHGYVH----E--IDNFEFIDGVIDAMRELKK-MGFALVVVTNQSG 54 (182)
T ss_dssp BCEEEECSBTTTBCCCSSCC----S--GGGCCBCTTHHHHHHHHHH-TTCEEEEEEECTH
T ss_pred CCEEEEeCCCCccCCCCCCC----C--HHHeeECCCHHHHHHHHhh-cCchhhhhhccch
Confidence 46899999999986543221 1 1345677899999999998 5999999999863
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=93.90 E-value=0.019 Score=55.71 Aligned_cols=54 Identities=19% Similarity=0.310 Sum_probs=40.7
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCC
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~ 649 (844)
.+.+.||||.||||....+.+. ...+-++-|.+.++|++|.+ .|..++|+|..+
T Consensus 21 ~~~~Aif~DrDGtl~~~~~y~~------~~~~~~l~pgv~e~L~~L~~-~G~~l~IvTNQ~ 74 (209)
T d2o2xa1 21 PHLPALFLDRDGTINVDTDYPS------DPAEIVLRPQMLPAIATANR-AGIPVVVVTNQS 74 (209)
T ss_dssp SSCCCEEECSBTTTBCCCSCTT------CGGGCCBCGGGHHHHHHHHH-HTCCEEEEEECH
T ss_pred CCCCEEEEeCCCCeECCCCCCC------CHHHeEecccHHHHHHHHHh-hCCeEEEecccc
Confidence 3457899999999987643321 11345677899999999998 599999999753
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=93.75 E-value=0.023 Score=54.03 Aligned_cols=38 Identities=18% Similarity=0.394 Sum_probs=30.4
Q ss_pred CCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC
Q 003145 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (844)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (844)
.+-|.+.++|+.|++ +..++|+|+.....+...+..++
T Consensus 82 ~~~~g~~~~L~~l~~--~~~~~ivT~~~~~~~~~~l~~~~ 119 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS--ELRLGIVTSQRRNELESGMRSYP 119 (207)
T ss_dssp EECTTHHHHHHHSCT--TSEEEEECSSCHHHHHHHHTTSG
T ss_pred ccccchhhhhhhhcc--ccccccccccccccccccccccc
Confidence 455778899999864 68899999999988888887753
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=93.61 E-value=0.037 Score=52.77 Aligned_cols=40 Identities=18% Similarity=0.272 Sum_probs=33.4
Q ss_pred CCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
.+-|.+.++|+.|.+ .|.+++|+||.+...+...++.+++
T Consensus 88 ~~~pg~~~~l~~L~~-~g~~~~i~T~~~~~~~~~~l~~~~l 127 (218)
T d1te2a_ 88 PLLPGVREAVALCKE-QGLLVGLASASPLHMLEKVLTMFDL 127 (218)
T ss_dssp CBCTTHHHHHHHHHH-TTCEEEEEESSCHHHHHHHHHHTTC
T ss_pred cccchHHHHHHHhhh-ccccccccccccccccccccccccc
Confidence 345789999999988 5999999999999999888877643
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.18 E-value=0.044 Score=52.39 Aligned_cols=56 Identities=13% Similarity=0.158 Sum_probs=37.7
Q ss_pred cCCeEEEEecCCccCCCCC-CCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCC
Q 003145 589 SNNRLLILGFNATLTEPVD-TPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~-~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR 648 (844)
.+.|+++||.||||..... .+. . ..+..-.-+.+.+.++|++|.+ .|..++|+|.-
T Consensus 19 ~~~Kia~fDrDGtLik~~~~~~~--~-~~~~d~~~l~~~v~~~i~~L~~-~gy~iiIvTNQ 75 (195)
T d1yj5a1 19 PQGKVAAFDLDGTLITTRSGKVF--P-TSPSDWRILYPEIPKKLQELAA-EGYKLVIFTNQ 75 (195)
T ss_dssp CCSCEEEECSBTTTEECSSSCSS--C-SSTTCCEESCTTHHHHHHHHHH-HTCEEEEEEEC
T ss_pred CcCcEEEEECCCceEeeCCCCcC--C-CChhhceeccCCHHHHHHHHHh-CCcEEEEecCc
Confidence 4578999999999985421 000 0 0000111246889999999988 49999999975
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=91.87 E-value=7.8 Score=39.58 Aligned_cols=241 Identities=15% Similarity=0.116 Sum_probs=138.5
Q ss_pred HhhCCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhh--cCCEEEEecHHHHHHHH
Q 003145 226 NKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFV 303 (844)
Q Consensus 226 ~~~~~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll--~aDlIgf~t~~~~~~Fl 303 (844)
.+..+| |+|.||.=-.-.++..+-....++||++. |---.+.++.. |+.++..|-+. .+|+---.+..+.++.+
T Consensus 84 l~~~kP-D~vlv~GDr~e~la~a~aa~~~~ipi~Hi-egG~rsg~~~~--~~~de~~R~~iskls~~hf~~t~~~~~~L~ 159 (373)
T d1v4va_ 84 LKEMGA-DYVLVHGDTLTTFAVAWAAFLEGIPVGHV-EAGLRSGNLKE--PFPEEANRRLTDVLTDLDFAPTPLAKANLL 159 (373)
T ss_dssp HHHTTC-SEEEEESSCHHHHHHHHHHHHTTCCEEEE-TCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHHHH
T ss_pred hhhcCc-ccccccccCccchhHHHHHHHhhhhheee-ccccccccccc--Ccchhhhhhhhccccceeeecchhhhhhhh
Confidence 344454 89999987777777666666668888863 33222333322 23345444332 35666556666655554
Q ss_pred HHHHHHhCcccCCCceeeCCeEEEEEEE-ecccChhHHhhhhcCCchHHHHHHHHH---Hh-CCCcEEEEEecccccCCH
Q 003145 304 SACTRILGFEGTPEGVEDQGRLTRVAAF-PIGIDSERFIRALEINPVQVHIKELQE---TF-AGRKVMLGVDRLDMIKGI 378 (844)
Q Consensus 304 ~~~~~~l~~~~~~~~v~~~g~~~~v~v~-P~GID~~~f~~~~~~~~~~~~~~~lr~---~~-~~~~vil~VdRld~~KGi 378 (844)
+ +|.+ ..+|.++ -+++|. +... ..+.+ .. .++.+++..-|....+..
T Consensus 160 ~-----~Ge~-----------~~~I~~vG~p~~D~--i~~~----------~~~~~~~~~~~~~~~~lvt~hr~~n~~~~ 211 (373)
T d1v4va_ 160 K-----EGKR-----------EEGILVTGQTGVDA--VLLA----------AKLGRLPEGLPEGPYVTVTMHRRENWPLL 211 (373)
T ss_dssp T-----TTCC-----------GGGEEECCCHHHHH--HHHH----------HHHCCCCTTCCSSCEEEECCCCGGGGGGH
T ss_pred h-----hccc-----------ccceeecccchhhH--HHhh----------hhhcccccccccccceeEEeccccccchH
Confidence 3 1211 1122222 123442 2111 00000 01 245667778888888888
Q ss_pred HHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHH
Q 003145 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 458 (844)
Q Consensus 379 ~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 458 (844)
...++++..+.+..++.. ++... +. . +.. +..+.+... . ...+.+ ...+++.++..+++
T Consensus 212 ~~~~~~~~~~~~~~~~~~----~i~p~-~~--~-~~~---~~~~~~~~~----~-----~~n~~~-~~~l~~~~~l~ll~ 270 (373)
T d1v4va_ 212 SDLAQALKRVAEAFPHLT----FVYPV-HL--N-PVV---REAVFPVLK----G-----VRNFVL-LDPLEYGSMAALMR 270 (373)
T ss_dssp HHHHHHHHHHHHHCTTSE----EEEEC-CS--C-HHH---HHHHHHHHT----T-----CTTEEE-ECCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcccce----eeeee-cc--c-ccc---hhhhhhhhc----c-----ccccee-eccchHHHHHHHhh
Confidence 889999998888876542 33222 21 1 211 112222111 1 123554 67899999999999
Q ss_pred hCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhh-ccCCeEEECCCCHHHHHHHHHHHhcCC
Q 003145 459 VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS-LGAGAILVNPWNITEVANAIARALNMS 528 (844)
Q Consensus 459 ~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~-lg~~g~lvnP~d~~~~A~ai~~aL~m~ 528 (844)
.|++++=.|- -...||.+.+ .|+|.-...|-.+. +..+..++-+.|.+++..+|..+|..+
T Consensus 271 ~s~~vignSs-----sgi~Ea~~lg----~P~Inir~~~eRqeg~~~g~nvlv~~d~~~I~~~i~~~l~~~ 332 (373)
T d1v4va_ 271 ASLLLVTDSG-----GLQEEGAALG----VPVVVLRNVTERPEGLKAGILKLAGTDPEGVYRVVKGLLENP 332 (373)
T ss_dssp TEEEEEESCH-----HHHHHHHHTT----CCEEECSSSCSCHHHHHHTSEEECCSCHHHHHHHHHHHHTCH
T ss_pred hceeEecccc-----hhhhcchhhc----CcEEEeCCCccCHHHHhcCeeEEcCCCHHHHHHHHHHHHcCH
Confidence 9999886663 4577999985 67776655565543 322333334569999999999999753
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=91.80 E-value=0.078 Score=49.47 Aligned_cols=38 Identities=13% Similarity=0.198 Sum_probs=30.0
Q ss_pred CCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC
Q 003145 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (844)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (844)
.+-+.+.+.|++|++ .|..++|+|+.+...+ +.+..++
T Consensus 79 ~~~~gv~~~l~~l~~-~g~~~~i~Sn~~~~~~-~~l~~~~ 116 (187)
T d2fi1a1 79 ILFEGVSDLLEDISN-QGGRHFLVSHRNDQVL-EILEKTS 116 (187)
T ss_dssp CBCTTHHHHHHHHHH-TTCEEEEECSSCTHHH-HHHHHTT
T ss_pred cccchhHHHHHHHHh-hhccccccccCccchh-hhhhhhc
Confidence 455789999999998 5999999999887655 4566654
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=91.36 E-value=0.09 Score=51.45 Aligned_cols=38 Identities=18% Similarity=0.165 Sum_probs=27.4
Q ss_pred CCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc
Q 003145 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (844)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (844)
.+-+.+.++|+.|.+ .|..++|+||.+...+...+..+
T Consensus 99 ~~~~g~~~~L~~Lk~-~g~~i~i~Tn~~~~~~~~~l~~~ 136 (257)
T d1swva_ 99 SPINGVKEVIASLRE-RGIKIGSTTGYTREMMDIVAKEA 136 (257)
T ss_dssp CBCTTHHHHHHHHHH-TTCEEEEBCSSCHHHHHHHHHHH
T ss_pred ccCCcHHHHHHHHHh-cccceeecCCCchhhHHHHHHHH
Confidence 456667777888877 47888888888877776666654
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=91.15 E-value=0.079 Score=49.90 Aligned_cols=58 Identities=16% Similarity=0.079 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCchhhc----cC-cEEEeCCCCcchhhhcCCHHHHHHHH
Q 003145 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVLLT----QF-LIQVGSSINSLSKEKKRKVHQLFGIF 834 (844)
Q Consensus 769 KG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDMf~----g~-~Iavgna~~~~a~~~l~~~~~v~~~l 834 (844)
|...++.++++++ .+++.+++||| +.+|+.. |+ +|.+.... .-+.+.+.+..++..+|
T Consensus 139 ~~~~~~~~~~~~~------~~p~~~l~VgD-~~~Di~~A~~~G~~~i~v~~~~-~~~~~~~~~~~dl~~l~ 201 (204)
T d2go7a1 139 SPEAATYLLDKYQ------LNSDNTYYIGD-RTLDVEFAQNSGIQSINFLEST-YEGNHRIQALADISRIF 201 (204)
T ss_dssp SSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHHHHHHTCEEEESSCCS-CTTEEECSSTTHHHHHT
T ss_pred hHHHHHHHHHHhC------CCCceEEEEeC-CHHHHHHHHHcCCeEEEEcCCC-CCcCeecCCHHHHHHHh
Confidence 4455666777787 67899999999 7788333 44 44455432 34667788887776654
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=90.96 E-value=0.3 Score=49.88 Aligned_cols=101 Identities=11% Similarity=0.046 Sum_probs=63.2
Q ss_pred eCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCc--------hhhc--cCCeEEECCC-
Q 003145 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA--------AQSL--GAGAILVNPW- 512 (844)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~--------~~~l--g~~g~lvnP~- 512 (844)
+.+.+++.+ ++..||+||..+ |.| +..|+|+|| .|+|+.-+.+- ++.+ ...|+.+++.
T Consensus 274 i~~~~p~~~---ll~~a~~~v~hg---G~~-t~~Eal~~G----~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~~~~ 342 (391)
T d1pn3a_ 274 VVGEVNLQE---LFGRVAAAIHHD---SAG-TTLLAMRAG----IPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGPV 342 (391)
T ss_dssp EESSCCHHH---HHTTSSCEEEES---CHH-HHHHHHHHT----CCEEEECSSCCBTTBCCHHHHHHHHHTSEEEECCSS
T ss_pred EecccCHHH---HHhhccEEEecC---chH-HHHHHHHhC----CcEEEeccccCCcchHHHHHHHHHHCCCEEEcCcCC
Confidence 467888665 567899999764 444 678999996 67887766552 2333 1357878765
Q ss_pred -CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 003145 513 -NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSE 558 (844)
Q Consensus 513 -d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~ 558 (844)
+.++++++|.++|+.+-. ++.+++.+.++.....+-++.+.+.
T Consensus 343 ~~~~~l~~~i~~~l~~~~r---~~a~~~a~~~~~~g~~~aa~~i~~~ 386 (391)
T d1pn3a_ 343 PTIDSLSAALDTALAPEIR---ARATTVADTIRADGTTVAAQLLFDA 386 (391)
T ss_dssp CCHHHHHHHHHHHTSTTHH---HHHHHHGGGSCSCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCHHHH---HHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 489999999999974322 3333444444443344444433333
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=90.70 E-value=11 Score=42.37 Aligned_cols=147 Identities=10% Similarity=0.085 Sum_probs=99.1
Q ss_pred CCcEEEEEecccccCCHHHHHHH----HHHHHHhCcCC-CCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCC
Q 003145 362 GRKVMLGVDRLDMIKGIPQKLLA----FEKFLEENSDW-RGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTL 436 (844)
Q Consensus 362 ~~~vil~VdRld~~KGi~~~l~A----f~~ll~~~P~~-~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~ 436 (844)
+..+++++-|+..-|-....+.- |.++.+ .|+. ...+++|..|....++... +++-+.+.+++.-||..=...
T Consensus 549 ~~lfd~~arRfheYKRq~Ln~~~i~~ly~rlk~-~~~~~~~P~q~IFaGKAhP~d~~g-K~iIk~I~~va~~in~dp~~~ 626 (824)
T d2gj4a1 549 NSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKK-EPNKFVVPRTVMIGGKAAPGYHMA-KMIIKLITAIGDVVNHDPVVG 626 (824)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHH-CTTSCCCCEEEEEECCCCTTCHHH-HHHHHHHHHHHHHHTTCTTTG
T ss_pred chhhhhheeechhhhhhhhhHhhHHHHHHHhhh-cccCCCCCeEEEEeCCCCCccHHH-HHHHHHHHHHHHHHhcChhhc
Confidence 56788899999999987774433 455443 4443 2357787777665555433 455667777777777521111
Q ss_pred CcccEEEeCCCCCHHHHHHHHHhCcEEEEcCC--CcCCChhHhhhhhcccCCCceEEEeCCCCchhhc-----cCCeEEE
Q 003145 437 TAVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILV 509 (844)
Q Consensus 437 ~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l-----g~~g~lv 509 (844)
+...|+|+. ..+-+--..++.+|||.+.+|+ .|.=|..-+=||.- |++.+|..-|+--++ +++|+++
T Consensus 627 ~~lkVvFle-nY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alN-----Gal~lstlDGwnvEi~~~vg~~N~~~f 700 (824)
T d2gj4a1 627 DRLRVIFLE-NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN-----GALTIGTMDGANVEMAEEAGEENFFIF 700 (824)
T ss_dssp GGEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT-----TCEEEECSCTTHHHHHHHHCGGGSEEC
T ss_pred cceeEEEcC-CCchHHHHHhhhhhhhhhcCCCCCcccCCcchhHHHHc-----CCeeeccccchHHHHHHhcCcccEEEe
Confidence 233577754 5566667789999999999998 48888888888775 899999999985443 4678887
Q ss_pred CCCCHHHH
Q 003145 510 NPWNITEV 517 (844)
Q Consensus 510 nP~d~~~~ 517 (844)
-. +.+++
T Consensus 701 G~-~~~ev 707 (824)
T d2gj4a1 701 GM-RVEDV 707 (824)
T ss_dssp SC-CHHHH
T ss_pred CC-Chhhh
Confidence 43 34443
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=89.97 E-value=5.7 Score=44.83 Aligned_cols=148 Identities=16% Similarity=0.143 Sum_probs=100.7
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHH---HHhCcCC-CCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCC
Q 003145 362 GRKVMLGVDRLDMIKGIPQKLLAFEKF---LEENSDW-RGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (844)
Q Consensus 362 ~~~vil~VdRld~~KGi~~~l~Af~~l---l~~~P~~-~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~ 437 (844)
+..++.++=|+..-|--...+.-..++ +...|.. +..+++|..|....++.+. +++-+.|.+++..||..=-..+
T Consensus 525 ~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~IfaGKAhP~d~~g-K~iIk~I~~va~~in~dp~~~~ 603 (796)
T d1l5wa_ 525 QAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLA-KNIIFAINKVADVINNDPLVGD 603 (796)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHH-HHHHHHHHHHHHHHHTCTTTGG
T ss_pred hhccchhhhhhhhhhcccchhhhHHHHHHHHhcCcccCCCceEEEEcCCCCCchHHH-HHHHHHHHHHHHHhcCChhhcc
Confidence 566888999999999987766655443 3344432 2247788777665555333 4566677777777775200011
Q ss_pred cccEEEeCCCCCHHHHHHHHHhCcEEEEcCC--CcCCChhHhhhhhcccCCCceEEEeCCCCchhhc-----cCCeEEEC
Q 003145 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVN 510 (844)
Q Consensus 438 ~~pv~~~~~~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l-----g~~g~lvn 510 (844)
...|+|+ ...+-+--..+..+|||.+.+|+ .|.-|..-+=|+.- |++.+|..-|.--++ +++|+++-
T Consensus 604 ~~kVVFl-enYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalN-----G~lnlstlDGw~vE~~~~vg~eN~f~fG 677 (796)
T d1l5wa_ 604 KLKVVFL-PDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALN-----GALTVGTLDGANVEIAEKVGEENIFIFG 677 (796)
T ss_dssp GEEEEEC-SSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHT-----TCEEEECSCTTHHHHHHHHCGGGSEECS
T ss_pred ceeEEEe-CCCchHHHHHHhcccchhhhCCCCCcccCCchHHHHHHc-----CCeeeecccchHHHHHHhcCccceEEec
Confidence 2257764 45576777789999999999998 58888888888775 899999999986543 56888883
Q ss_pred CCCHHHH
Q 003145 511 PWNITEV 517 (844)
Q Consensus 511 P~d~~~~ 517 (844)
.+.+++
T Consensus 678 -~~~~ev 683 (796)
T d1l5wa_ 678 -HTVEQV 683 (796)
T ss_dssp -CCHHHH
T ss_pred -CchHHH
Confidence 344444
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=89.41 E-value=0.18 Score=48.66 Aligned_cols=61 Identities=5% Similarity=-0.058 Sum_probs=40.9
Q ss_pred HHHHHHHHhcccCcCCCCCceEEEEeeCC-Cchhhc----cCc-EEEeC--C-----CCcchhhhcCCHHHHHHHHHHHh
Q 003145 772 AIDRILAEIVHSKKMKTAIDYVLCIGHFL-GKVLLT----QFL-IQVGS--S-----INSLSKEKKRKVHQLFGIFLRFS 838 (844)
Q Consensus 772 al~~Ll~~l~~~~~~~~~~d~vlaiGD~~-~nDMf~----g~~-Iavgn--a-----~~~~a~~~l~~~~~v~~~l~~~~ 838 (844)
..+.+++.++ .+++.+++||| + .+|+.. |+. +.+-+ + ....+.+.+++..++..+|+.+-
T Consensus 169 ~~~~~~~~~~------~~~~~~l~iGD-~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~l~eL~~ll~~i~ 241 (247)
T d2gfha1 169 IFYHCCDLLG------VQPGDCVMVGD-TLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALLQSID 241 (247)
T ss_dssp HHHHHHHHHT------CCGGGEEEEES-CTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHHHHHHT
T ss_pred hHHHHHHHhh------cCHHhcceecc-ChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEECCHHHHHHHHHHHh
Confidence 4456667777 67889999999 7 478433 653 33322 1 11335667999999999998874
Q ss_pred h
Q 003145 839 Y 839 (844)
Q Consensus 839 ~ 839 (844)
.
T Consensus 242 ~ 242 (247)
T d2gfha1 242 C 242 (247)
T ss_dssp T
T ss_pred h
Confidence 3
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=89.28 E-value=0.64 Score=47.22 Aligned_cols=90 Identities=14% Similarity=0.062 Sum_probs=58.9
Q ss_pred EEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCC----chhhc--cCCeEEECCC--
Q 003145 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW-- 512 (844)
Q Consensus 441 v~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G----~~~~l--g~~g~lvnP~-- 512 (844)
++ +.+.+++. ++|..+|+||. -|-..++.|++++| .|+|+--+.+ .+..+ ...|+.+++.
T Consensus 287 v~-~~~~~p~~---~~l~~~~~~V~----hgG~~t~~Eal~~G----vP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~~ 354 (401)
T d1iira_ 287 CF-AIGEVNHQ---VLFGRVAAVIH----HGGAGTTHVAARAG----APQILLPQMADQPYYAGRVAELGVGVAHDGPIP 354 (401)
T ss_dssp EE-ECSSCCHH---HHGGGSSEEEE----CCCHHHHHHHHHHT----CCEEECCCSTTHHHHHHHHHHHTSEEECSSSSC
T ss_pred EE-EEeccCHH---HHHhhcCEEEe----cCCchHHHHHHHhC----CCEEEccccccHHHHHHHHHHCCCEEEcCcCCC
Confidence 44 47788765 45788999983 56667788999996 6777754444 22223 1357888775
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Q 003145 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTT 545 (844)
Q Consensus 513 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 545 (844)
+.++++++|.++|+ + +-+++.+++.+.++.
T Consensus 355 ~~~~l~~ai~~~l~--~-~~~~~a~~~~~~~~~ 384 (401)
T d1iira_ 355 TFDSLSAALATALT--P-ETHARATAVAGTIRT 384 (401)
T ss_dssp CHHHHHHHHHHHTS--H-HHHHHHHHHHHHSCS
T ss_pred CHHHHHHHHHHHhC--H-HHHHHHHHHHHHHHh
Confidence 68999999999995 2 223344444444443
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=89.20 E-value=0.32 Score=46.23 Aligned_cols=37 Identities=8% Similarity=0.100 Sum_probs=29.2
Q ss_pred CChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc
Q 003145 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (844)
Q Consensus 623 ~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (844)
+-|.+.+.|.+|++ .|.+++|+|+.+.......+...
T Consensus 128 ~~pg~~e~l~~L~~-~g~~l~i~Tn~~~~~~~~~~~~~ 164 (253)
T d1zs9a1 128 FFADVVPAVRKWRE-AGMKVYIYSSGSVEAQKLLFGHS 164 (253)
T ss_dssp CCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHTB
T ss_pred cCCCHHHHHHHHhh-ccCceeecCCCcHHHHHHHHHHc
Confidence 44678888999987 58999999999888777666654
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=88.18 E-value=0.31 Score=44.96 Aligned_cols=57 Identities=9% Similarity=0.158 Sum_probs=47.2
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 592 rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
-++++|-+|||+-..-+| |-+++.++|+.|.+ .|+.|+++||=.........+.+++
T Consensus 3 ~~~~~d~~~~~~~~~~Dp-------------~R~~~~~~I~~l~~-~GI~v~miTGD~~~tA~~ia~~~Gi 59 (168)
T d1wpga2 3 SVICSDKTGTLTTNQLDP-------------PRKEVMGSIQLCRD-AGIRVIMITGDNKGTAIAICRRIGI 59 (168)
T ss_dssp CEEEECCTTTTBCCCECC-------------BCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTTS
T ss_pred EEEEECCccEEEEEecCC-------------CchhHHHHHHHHHH-CcCEEEEECCCCHHHHHHHHHHcCC
Confidence 468889999998764333 56789999999988 5999999999999999888887653
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=87.81 E-value=0.13 Score=49.38 Aligned_cols=73 Identities=8% Similarity=-0.027 Sum_probs=50.7
Q ss_pred cHHHHHHHHHhcCCeEEEEecCCccCCCCC---------CCCCC-----Cccc------cccccCCChhHHHHHHHhhcC
Q 003145 578 READSIERYLRSNNRLLILGFNATLTEPVD---------TPGRR-----GDQI------REMELKLHPDLKQPLNALCHD 637 (844)
Q Consensus 578 ~~~~~~~~y~~sk~rLi~lD~DGTL~~~~~---------~p~~~-----~~~~------~~~~~~~~~~~~~~L~~L~~d 637 (844)
.+.++.+.+..-+...|+||+|-|++...+ .|+.. .... -+..+.+-+.+++.|+.+.+
T Consensus 22 ~~~~i~~~~~g~~P~AIifDIDETvLdnspy~~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~A~p~pga~~fl~~~~~- 100 (209)
T d2b82a1 22 SVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVR- 100 (209)
T ss_dssp CHHHHHHHTTTCCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHH-
T ss_pred EHHHHHHhcCCCCCceEEEcchhhhhcCcHHHHhhhhhcCcCcccccCCCcchHHHhcccccccCcchhHHHHHHHHHH-
Confidence 567778888876777999999999997631 01000 0000 01234566789999999998
Q ss_pred CCCcEEEEcCCChh
Q 003145 638 PKTTIVVLSGSDRN 651 (844)
Q Consensus 638 ~g~~V~I~SGR~~~ 651 (844)
.|.+|+.+|||+..
T Consensus 101 ~Gv~IfyVTnR~~~ 114 (209)
T d2b82a1 101 RGDAIFFVTGRSPT 114 (209)
T ss_dssp HTCEEEEEECSCCC
T ss_pred cCCeEEEEeCCchh
Confidence 59999999999854
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=87.38 E-value=0.52 Score=48.20 Aligned_cols=102 Identities=14% Similarity=0.044 Sum_probs=65.1
Q ss_pred EEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCC----chhhc--cCCeEEECCC--
Q 003145 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW-- 512 (844)
Q Consensus 441 v~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G----~~~~l--g~~g~lvnP~-- 512 (844)
+. +.+.+++.+ ++..+|+|+. .|-..+..||+++| .|+|+.-+.+ .+..+ ...|+.+++.
T Consensus 288 v~-~~~~~p~~~---ll~~~~~~I~----hgG~~t~~Eal~~G----vP~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~~ 355 (401)
T d1rrva_ 288 CF-AIDEVNFQA---LFRRVAAVIH----HGSAGTEHVATRAG----VPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTP 355 (401)
T ss_dssp EE-EESSCCHHH---HGGGSSEEEE----CCCHHHHHHHHHHT----CCEEECCCSBTHHHHHHHHHHHTSEEECSSSCC
T ss_pred EE-EEeccCcHH---HhhhccEEEe----cCCchHHHHHHHhC----CCEEEecccccHHHHHHHHHHCCCEEEcCcCCC
Confidence 44 467888665 4678999984 55556679999996 6777766555 23333 1347888775
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 003145 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVS 557 (844)
Q Consensus 513 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~ 557 (844)
+.+.++++|.++|+ + +.+++.++..+.+......+-++.+++
T Consensus 356 ~~~~L~~ai~~vl~--~-~~r~~a~~~~~~~~~~g~~~aa~~ie~ 397 (401)
T d1rrva_ 356 TFESLSAALTTVLA--P-ETRARAEAVAGMVLTDGAAAAADLVLA 397 (401)
T ss_dssp CHHHHHHHHHHHTS--H-HHHHHHHHHTTTCCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhC--H-HHHHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 58999999999985 3 334444455455544444444444333
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.35 E-value=0.71 Score=42.90 Aligned_cols=71 Identities=15% Similarity=0.161 Sum_probs=48.7
Q ss_pred hcCCeEEEEecCCccCCCCCCCCCCCcccc---------ccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhc
Q 003145 588 RSNNRLLILGFNATLTEPVDTPGRRGDQIR---------EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (844)
Q Consensus 588 ~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~---------~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 658 (844)
.+++..+++|+|+||+-....|....+..- ......-|.+.+-|+.+++ ...|+|-|.-+...++..+.
T Consensus 12 ~~~k~~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~--~yei~I~Ta~~~~YA~~il~ 89 (181)
T d1ta0a_ 12 DSDKICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGE--LFECVLFTASLAKYADPVAD 89 (181)
T ss_dssp GTTSCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHH--HSEEEEECSSCHHHHHHHHH
T ss_pred cCCCeEEEEeCCCCEEccccCCCCCccceeeecccceeeeeEEecCCCHHHHHHHHHh--ceEEEEEcCCcHHHHHHHHH
Confidence 356778999999999964433311111000 0011235778999999986 68999999999999988888
Q ss_pred cc
Q 003145 659 EY 660 (844)
Q Consensus 659 ~l 660 (844)
.+
T Consensus 90 ~l 91 (181)
T d1ta0a_ 90 LL 91 (181)
T ss_dssp HH
T ss_pred Hh
Confidence 77
|