Citrus Sinensis ID: 003189
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 840 | 2.2.26 [Sep-21-2011] | |||||||
| Q37145 | 1020 | Calcium-transporting ATPa | yes | no | 0.998 | 0.822 | 0.823 | 0.0 | |
| O81108 | 1014 | Calcium-transporting ATPa | no | no | 0.994 | 0.823 | 0.802 | 0.0 | |
| Q2QMX9 | 1020 | Calcium-transporting ATPa | yes | no | 0.998 | 0.822 | 0.792 | 0.0 | |
| O64806 | 1015 | Putative calcium-transpor | no | no | 0.994 | 0.822 | 0.791 | 0.0 | |
| Q6ATV4 | 1033 | Calcium-transporting ATPa | no | no | 0.933 | 0.758 | 0.719 | 0.0 | |
| Q9M2L4 | 1025 | Putative calcium-transpor | no | no | 0.984 | 0.806 | 0.635 | 0.0 | |
| Q2QY12 | 1039 | Probable calcium-transpor | no | no | 0.994 | 0.803 | 0.638 | 0.0 | |
| O22218 | 1030 | Calcium-transporting ATPa | no | no | 0.986 | 0.804 | 0.635 | 0.0 | |
| Q2RAS0 | 1017 | Probable calcium-transpor | no | no | 0.967 | 0.799 | 0.625 | 0.0 | |
| Q8RUN1 | 1043 | Calcium-transporting ATPa | no | no | 0.979 | 0.789 | 0.615 | 0.0 |
| >sp|Q37145|ACA1_ARATH Calcium-transporting ATPase 1, chloroplastic OS=Arabidopsis thaliana GN=ACA1 PE=1 SV=3 | Back alignment and function desciption |
|---|
Score = 1410 bits (3649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 691/839 (82%), Positives = 759/839 (90%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVK KN+S+EALQRWRKLC VKN KRRFRFTANLSKR EAEAIRRSNQE
Sbjct: 1 MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFI+ L LSSEYT+PEEV +GF+ICPDELGSIVEGHD+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFINSLKLSSEYTLPEEVRKAGFEICPDELGSIVEGHDLKKLKIHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EG+ EKLSTSI GISTSE LL+ RKEIYGIN+FTESP+RGFW++VWEAL D TLMILA
Sbjct: 121 TEGLTEKLSTSIASGISTSEDLLSVRKEIYGINQFTESPSRGFWLFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
CA VSL+VGI EGWP GAHDGLGIV SILLVVFVTATSDY+QSLQFKDLD EKKKI V
Sbjct: 181 ACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDAEKKKIVV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+ R+KISIYDLLPGD+VHL +GDQ+PADGLF+SGFSVLINESSLTGESEPV+V+
Sbjct: 241 QVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESEPVSVSV 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
+PFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 EHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAV+TFAV+VQGL +K + +HW W+ D+ + +LE+FA+AVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVITFAVLVQGLANQKRLDNSHWIWTADELMAMLEYFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVR+LAACETMGSAT+ICSDKTGTLTTNHMTV+KACICE+ KEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACICEQAKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ F S IP SA KLLLQSIF NTGGE+V+G+GNKTEILGTPTETA+LEFGL LG
Sbjct: 481 NGPDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKTEILGTPTETALLEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQ RQAS +VKVEPFNS KK+MGVVIELPE FR HCKGASEI+L +CDK++N +GE
Sbjct: 541 GDFQEVRQASNVVKVEPFNSTKKRMGVVIELPERHFRAHCKGASEIVLDSCDKYINKDGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+E + +HL IE+FASEALRTLCLA EIG+EFS +APIP+ GYTCIGIVGIKDP
Sbjct: 601 VVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAIC+SAGITVRMVTGDN+ TAKAIARECGILTD+GIAIEGPEFREKSDEEL
Sbjct: 661 VRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFREKSDEEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPK+QVMARSSPMDKHTLV+ LRT EVVAVTGDGTNDAPALHEADIGLAMGI+GT
Sbjct: 721 LKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISGT 780
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF SACLTG
Sbjct: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFLSACLTG 839
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8 |
| >sp|O81108|ACA2_ARATH Calcium-transporting ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=ACA2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1366 bits (3536), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 674/840 (80%), Positives = 756/840 (90%), Gaps = 5/840 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVKAK++SEE L++WR LCG VKN KRRFRFTANLSKR+EA A+RR+NQE
Sbjct: 1 MESYLNENF-DVKAKHSSEEVLEKWRNLCGVVKNPKRRFRFTANLSKRYEAAAMRRTNQE 59
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K R+AVLVS+AA QFI G++ S+YTVPE+V A+GF+IC DELGSIVE HD+KKLK HGG
Sbjct: 60 KLRIAVLVSKAAFQFISGVS-PSDYTVPEDVKAAGFEICADELGSIVESHDVKKLKFHGG 118
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V+G+A KL S TDG+ST L++R+E++GINKF ES RGFWV+VWEAL DMTLMIL
Sbjct: 119 VDGLAGKLKASPTDGLSTEAAQLSQRQELFGINKFAESEMRGFWVFVWEALQDMTLMILG 178
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA VSL+VGIATEGWPKG+HDGLGI SILLVVFVTATSDY+QSLQF+DLD+EKKKITV
Sbjct: 179 VCAFVSLIVGIATEGWPKGSHDGLGIAASILLVVFVTATSDYRQSLQFRDLDKEKKKITV 238
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RNGFR+K+SIYDLLPGDIVHL +GDQVPADGLF+SGFSV+I+ESSLTGESEPV VNA
Sbjct: 239 QVTRNGFRQKLSIYDLLPGDIVHLAIGDQVPADGLFLSGFSVVIDESSLTGESEPVMVNA 298
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
NPFL+SGTKVQ+GSCKM++TTVGMRTQWGKLMATL+EGGDDETPLQVKLNGVATIIGKI
Sbjct: 299 QNPFLMSGTKVQDGSCKMMITTVGMRTQWGKLMATLTEGGDDETPLQVKLNGVATIIGKI 358
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAVVTFAV+VQG+F RKL GTHW WSGD+ALE+LE+FAIAVTIVVVAVPEGLPLAV
Sbjct: 359 GLFFAVVTFAVLVQGMFMRKLSTGTHWVWSGDEALELLEYFAIAVTIVVVAVPEGLPLAV 418
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+K+CIC +++V
Sbjct: 419 TLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKSCICMNVQDV 478
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
N KG+ + S IP SA KLL+QSIFNNTGGEVV+ + KTE+LGTPTETAILE GL LG
Sbjct: 479 AN-KGS-SLQSEIPESAVKLLIQSIFNNTGGEVVVNKHGKTELLGTPTETAILELGLSLG 536
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGG-FRVHCKGASEIILAACDKFLNSNG 599
G FQ ER++ K++KVEPFNS KK+MGVVIELPEGG R H KGASEI+LAACDK +NS+G
Sbjct: 537 GKFQEERKSYKVIKVEPFNSTKKRMGVVIELPEGGRMRAHTKGASEIVLAACDKVVNSSG 596
Query: 600 EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKD 659
EVVPL+E ++ +LN TI +FA+EALRTLCLA M+I FS D IP G+TC+GIVGIKD
Sbjct: 597 EVVPLDEESIKYLNVTINEFANEALRTLCLAYMDIEGGFSPDDAIPASGFTCVGIVGIKD 656
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
P+RPGVKESV +CR AGITVRMVTGDNINTAKAIARECGILTD+GIAIEGP FREK+ EE
Sbjct: 657 PVRPGVKESVELCRRAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPVFREKNQEE 716
Query: 720 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779
L +LIPKIQVMARSSPMDKHTLVK LRTT EVVAVTGDGTNDAPALHEADIGLAMGIAG
Sbjct: 717 LLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAG 776
Query: 780 TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVAL+VNFSSACLTG
Sbjct: 777 TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALVVNFSSACLTG 836
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into the endoplasmic reticulum. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2QMX9|ACA1_ORYSJ Calcium-transporting ATPase 1, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0586600 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1347 bits (3486), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 665/839 (79%), Positives = 738/839 (87%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YL ENF VKAKN+SEEAL+RWRKLCG VKN KRRFRFTANL KR EA+AI+ +N E
Sbjct: 1 MESYLEENFGGVKAKNSSEEALRRWRKLCGVVKNPKRRFRFTANLDKRGEAQAIKHANHE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K RVAVLVS+AALQFI GL+L SEY VPEEV A+GFQIC DELGSIVEGHD KKL HGG
Sbjct: 61 KLRVAVLVSKAALQFIQGLSLRSEYVVPEEVKAAGFQICADELGSIVEGHDSKKLITHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V GIA+KL+TS DG+ST+E + RR+++YG+NKFTES R FWV+VWEAL D TL+ILA
Sbjct: 121 VTGIADKLATSPADGLSTAEESIKRRQDVYGLNKFTESEVRSFWVFVWEALQDTTLIILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA VSLVVGIA EGWPKGAHDGLGIV SILLVVFVTATSDY+QSLQFKDLD+EKKKI V
Sbjct: 181 VCAFVSLVVGIAMEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKIQV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RNGFR+++SIYDLLPGD+VHL +GDQVPADGLF+SGFS+LINESSLTGESEPV VN
Sbjct: 241 QVTRNGFRQRLSIYDLLPGDVVHLAIGDQVPADGLFISGFSLLINESSLTGESEPVVVNE 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
NPFLLSGTKVQ+GSCKML+TTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 DNPFLLSGTKVQDGSCKMLITTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAV+TF V+ QGL ++K EG +WSGDDALE+LE FAIAVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVITFIVLSQGLISKKYHEGLLLSWSGDDALEMLEHFAIAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+KACIC IKEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKACICGNIKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+N K S +P + K LL+SIFNNTGGEVVI + K +ILGTPTETA+LEF L LG
Sbjct: 481 NNPKNASDLCSELPETVVKTLLESIFNNTGGEVVIDQDGKYQILGTPTETALLEFALSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
G+F+A+R +KIVK+EPFNS KK+M VV++LP GG R HCKGASEI+LAACDKF++ G
Sbjct: 541 GNFKAKRDETKIVKMEPFNSTKKRMCVVLKLPGGGCRAHCKGASEIVLAACDKFMDETGA 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL++ + LN IE FA+EALRTLCL E+ FS + IP +GYTCIGIVGIKDP
Sbjct: 601 VVPLDKTTADKLNGIIESFANEALRTLCLGYREMEEGFSVEEQIPLQGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGV+ESVA CRSAGI VRMVTGDNINTAKAIARECGILT++G+AIEGPEFREKS +EL
Sbjct: 661 VRPGVRESVATCRSAGIMVRMVTGDNINTAKAIARECGILTEDGLAIEGPEFREKSLDEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPKIQVMARSSP+DKHTLVKHLRTT EVVAVTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 721 LKLIPKIQVMARSSPLDKHTLVKHLRTTFNEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
EVAKESADVIILDDNFSTIVTVAKWGRSVY+NIQKFVQFQLTVNVVAL+VNFSSAC TG
Sbjct: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYVNIQKFVQFQLTVNVVALLVNFSSACFTG 839
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O64806|ACA7_ARATH Putative calcium-transporting ATPase 7, plasma membrane-type OS=Arabidopsis thaliana GN=ACA7 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 1338 bits (3463), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 666/841 (79%), Positives = 747/841 (88%), Gaps = 6/841 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLN NF DVKAK++SEE L++WR LC VKN KRRFRFTANLSKR+EA A+RR+NQE
Sbjct: 1 MESYLNSNF-DVKAKHSSEEVLEKWRNLCSVVKNPKRRFRFTANLSKRYEAAAMRRTNQE 59
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K R+AVLVS+AA QFI G++ S+Y VPEEV A+GF IC DELGSIVEGHD+KKLK HGG
Sbjct: 60 KLRIAVLVSKAAFQFISGVS-PSDYKVPEEVKAAGFDICADELGSIVEGHDVKKLKFHGG 118
Query: 121 VEGIAEKLSTSITDGISTSE-HLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMIL 179
V+G++ KL G+ST E L++R+E++GINKF ES R FWV+VWEAL DMTLMIL
Sbjct: 119 VDGLSGKLKACPNAGLSTGEPEQLSKRQELFGINKFAESELRSFWVFVWEALQDMTLMIL 178
Query: 180 AVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKIT 239
VCA VSL+VGIATEGWP+G+HDGLGIV SILLVVFVTATSDY+QSLQF+DLD+EKKKIT
Sbjct: 179 GVCAFVSLIVGIATEGWPQGSHDGLGIVASILLVVFVTATSDYRQSLQFRDLDKEKKKIT 238
Query: 240 VQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVN 299
VQV RNGFR+K+SIYDLLPGD+VHL +GDQVPADGLF+SGFSV+I+ESSLTGESEPV V
Sbjct: 239 VQVTRNGFRQKMSIYDLLPGDVVHLAIGDQVPADGLFLSGFSVVIDESSLTGESEPVMVT 298
Query: 300 ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 359
A NPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK
Sbjct: 299 AQNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 358
Query: 360 IGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLA 419
IGL FA+VTFAV+VQG+F RKL G HW WSGDDALE+LE+FAIAVTIVVVAVPEGLPLA
Sbjct: 359 IGLSFAIVTFAVLVQGMFMRKLSLGPHWWWSGDDALELLEYFAIAVTIVVVAVPEGLPLA 418
Query: 420 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE 479
VTLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+K+CIC +++
Sbjct: 419 VTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKSCICMNVQD 478
Query: 480 VDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL 539
V + + + S IP +A KLLLQ IFNNTGGEVV+ E KTEILGTPTETAILE GL L
Sbjct: 479 V--ASKSSSLQSDIPEAALKLLLQLIFNNTGGEVVVNERGKTEILGTPTETAILELGLSL 536
Query: 540 GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGG-FRVHCKGASEIILAACDKFLNSN 598
GG FQ ERQ++K++KVEPFNS KK+MGVVIELPEGG R H KGASEI+LAACDK +NS+
Sbjct: 537 GGKFQEERQSNKVIKVEPFNSTKKRMGVVIELPEGGRIRAHTKGASEIVLAACDKVINSS 596
Query: 599 GEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIK 658
GEVVPL++ ++ LN TI++FA+EALRTLCLA M+I + FSAD IP +G+TCIGIVGIK
Sbjct: 597 GEVVPLDDESIKFLNVTIDEFANEALRTLCLAYMDIESGFSADEGIPEKGFTCIGIVGIK 656
Query: 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDE 718
DP+RPGV+ESV +CR AGI VRMVTGDNINTAKAIARECGILTD+GIAIEGP FREK+ E
Sbjct: 657 DPVRPGVRESVELCRRAGIMVRMVTGDNINTAKAIARECGILTDDGIAIEGPVFREKNQE 716
Query: 719 ELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIA 778
E+ +LIPKIQVMARSSPMDKHTLVK LRTT EVVAVTGDGTNDAPALHEADIGLAMGIA
Sbjct: 717 EMLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIA 776
Query: 779 GTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT 838
GTEVAKE ADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT
Sbjct: 777 GTEVAKEIADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT 836
Query: 839 G 839
G
Sbjct: 837 G 837
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q6ATV4|ACA2_ORYSJ Calcium-transporting ATPase 2, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os03g0616400 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1135 bits (2935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/785 (71%), Positives = 657/785 (83%), Gaps = 1/785 (0%)
Query: 55 RRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKK 114
R S+ EK +VA L S+A L+F HG++L S Y VPE+V A+GFQI DEL SIVE D KK
Sbjct: 60 RASHHEKLQVAALPSKATLEFEHGVSLRSAYIVPEDVQAAGFQIDADELASIVESRDTKK 119
Query: 115 LKVHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDM 174
L VHG + GIA+KL TS+T+GI T + LLN+R++IYG+NKF E+ R FW +VWEAL D
Sbjct: 120 LTVHGQLNGIADKLGTSLTNGIVTDKDLLNQRQDIYGVNKFAETEIRSFWEFVWEALEDT 179
Query: 175 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDRE 234
TL+IL+ CA+ SLVVGI TEGWP+GAHDG+GIV SILLVV VT TS+Y+QSLQF+DLD+E
Sbjct: 180 TLIILSACAIFSLVVGITTEGWPQGAHDGVGIVASILLVVSVTGTSNYQQSLQFRDLDKE 239
Query: 235 KKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESE 294
K+KI VQV RNG R+++ I DLLPGD VHL +GDQVPADGLF+SGFSVL++ESSLTGESE
Sbjct: 240 KRKILVQVTRNGLRQRVLIDDLLPGDAVHLAVGDQVPADGLFISGFSVLVDESSLTGESE 299
Query: 295 PVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA 354
PV VN NP+LLSGTKV +GSCKMLVT VGMRTQWGKLMA L++GGDDETPLQ +LNGVA
Sbjct: 300 PVFVNEDNPYLLSGTKVLDGSCKMLVTAVGMRTQWGKLMAVLTDGGDDETPLQTRLNGVA 359
Query: 355 TIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPE 414
IGKIGLFFAV+TF V+ QG+ +K +G +WSGDD LEIL+ FA+AVTIVVVAVPE
Sbjct: 360 NTIGKIGLFFAVLTFIVLSQGIIGQKYLDGLLLSWSGDDVLEILDHFAVAVTIVVVAVPE 419
Query: 415 GLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACIC 474
GLPLAVTLSLAFAMKKMMNDKALVR LAACETMGSAT ICSDKTGTLTTN MTV+KACIC
Sbjct: 420 GLPLAVTLSLAFAMKKMMNDKALVRQLAACETMGSATVICSDKTGTLTTNRMTVVKACIC 479
Query: 475 EEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILE 534
+V+N + TP S+ P A + LL+SIFNNT GEVV + K +ILGTPTETA+LE
Sbjct: 480 GNTIQVNNPQ-TPNMSSNFPEVAVETLLESIFNNTSGEVVTNQDGKYQILGTPTETALLE 538
Query: 535 FGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKF 594
F LLL GD + ++ SKIVKVEPFNS KK+M ++ELP GG+R HCKGASEI+LAACDKF
Sbjct: 539 FALLLDGDCKEKQLGSKIVKVEPFNSTKKRMSTILELPGGGYRAHCKGASEIVLAACDKF 598
Query: 595 LNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGI 654
++ G +VPL++ + LN+ I+ F+SEALRTLCLA E+ FS IP +GYTCIGI
Sbjct: 599 IDERGCIVPLDDKTSSKLNDIIKAFSSEALRTLCLAYREMEEGFSTQEQIPLQGYTCIGI 658
Query: 655 VGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFRE 714
VGIKDP+RPGV++SVA CRSAGI+VRM+TGDNI+TAKAIARECGILT +GIAIEG EFRE
Sbjct: 659 VGIKDPVRPGVRQSVATCRSAGISVRMITGDNIDTAKAIARECGILTKDGIAIEGAEFRE 718
Query: 715 KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774
KS EEL LIPK+QV+ARSSP+DKHTLVKHLRT EVVAVTGDGTNDAPAL EADIGLA
Sbjct: 719 KSAEELHDLIPKMQVLARSSPLDKHTLVKHLRTAFNEVVAVTGDGTNDAPALREADIGLA 778
Query: 775 MGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSS 834
MGIAGTEVAKESADV+ILDDNFSTIVTVAKWGRSVY+NIQKFVQFQLTVNVVAL+VNF+S
Sbjct: 779 MGIAGTEVAKESADVVILDDNFSTIVTVAKWGRSVYVNIQKFVQFQLTVNVVALLVNFTS 838
Query: 835 ACLTG 839
AC TG
Sbjct: 839 ACFTG 843
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9M2L4|ACA11_ARATH Putative calcium-transporting ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=ACA11 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1057 bits (2734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/839 (63%), Positives = 649/839 (77%), Gaps = 12/839 (1%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
M N L + +V +KN S EA QRWR G VKNR RRFR +NL K E E R QE
Sbjct: 1 MSNLLKD--FEVASKNPSLEARQRWRSSVGLVKNRARRFRMISNLDKLAENEKKRCQIQE 58
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K RV V +AA QFI EY + +EV +GF + DEL S+V HD K L GG
Sbjct: 59 KIRVVFYVQKAAFQFIDA-GARPEYKLTDEVKKAGFYVEADELASMVRNHDTKSLTKIGG 117
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EGIA+K+S S+ +G+ +SE L+ R++IYG N++TE PAR F +VWEAL D+TL+IL
Sbjct: 118 PEGIAQKVSVSLAEGVRSSE--LHIREKIYGENRYTEKPARSFLTFVWEALQDITLIILM 175
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA+VS+ VG+ATEG+PKG +DG GI++SI+LVV VTA SDYKQSLQF+DLDREKKKI +
Sbjct: 176 VCAVVSIGVGVATEGFPKGMYDGTGILLSIILVVMVTAISDYKQSLQFRDLDREKKKIII 235
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+G R+++SI+DL+ GD+VHL +GDQVPADG+F+SG+++ I+ESSL+GESEP +VN
Sbjct: 236 QVTRDGSRQEVSIHDLVVGDVVHLSIGDQVPADGIFISGYNLEIDESSLSGESEPSHVNK 295
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
PFLLSGTKVQNGS KMLVTTVGMRT+WGKLM TLSEGG+DETPLQVKLNGVATIIGKI
Sbjct: 296 EKPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLMDTLSEGGEDETPLQVKLNGVATIIGKI 355
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GL FAV+TF V+ K G+ WS +DAL +L++FAIAVTI+VVAVPEGLPLAV
Sbjct: 356 GLGFAVLTFVVLCIRFVVEKATAGSITEWSSEDALTLLDYFAIAVTIIVVAVPEGLPLAV 415
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMK++M+D+ALVRHLAACETMGS+T IC+DKTGTLTTNHM V K ICE IKE
Sbjct: 416 TLSLAFAMKQLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVWICENIKE- 474
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ F ++ +L+Q+IF NTG EVV + KT+ILG+PTE AILEFGLLLG
Sbjct: 475 ---RQEENFQLNLSEQVKNILIQAIFQNTGSEVVKDKEGKTQILGSPTERAILEFGLLLG 531
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GD +R+ KI+K+EPFNS KK+M V+ G R CKGASEI+L C+K ++SNGE
Sbjct: 532 GDVDTQRREHKILKIEPFNSDKKKMSVLTSHSGGKVRAFCKGASEIVLKMCEKVVDSNGE 591
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VPL+E + +++ IE FASEALRTLCL ++ D +P GYT + +VGIKDP
Sbjct: 592 SVPLSEEKIASISDVIEGFASEALRTLCLVYTDLDEAPRGD--LPNGGYTLVAVVGIKDP 649
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGV+E+V C++AGITVRMVTGDNI+TAKAIA+ECGILT G+AIEG +FR E+
Sbjct: 650 VRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGILTAGGVAIEGSDFRNLPPHEM 709
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
++PKIQVMARS P+DKHTLV +LR +GEVVAVTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 710 RAILPKIQVMARSLPLDKHTLVNNLR-KMGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 768
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
EVAKE+ADVII+DDNF+TIV VAKWGR+VYINIQKFVQFQLTVNVVALI+NF SAC+TG
Sbjct: 769 EVAKENADVIIMDDNFATIVNVAKWGRAVYINIQKFVQFQLTVNVVALIINFVSACITG 827
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2QY12|ACA4_ORYSJ Probable calcium-transporting ATPase 4, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0136900 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1056 bits (2731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/840 (63%), Positives = 648/840 (77%), Gaps = 5/840 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCG-FVKNRKRRFRFTANLSKRFEAEAIRRSNQ 59
++ YL ENF DV AKN SEEA +RWR+ G VKNR+RRFR+ +L +R +A RS Q
Sbjct: 4 LDRYLQENF-DVPAKNPSEEAQRRWRQAVGTIVKNRRRRFRWVPDLERRSLDKAKVRSTQ 62
Query: 60 EKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHG 119
EK RVA+ V QAAL F G EY + ++ +G+ I PDEL I HD K LK+HG
Sbjct: 63 EKIRVALYVQQAALIFSDGAK-KKEYKLTGDIIKAGYAINPDELALITSKHDSKALKMHG 121
Query: 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMIL 179
GV+GI+ K+ +S GI SE L+ R+ IYG+N++ E P+R FW++VW+AL DMTL+IL
Sbjct: 122 GVDGISIKVRSSFDHGIYASE--LDTRQNIYGVNRYAEKPSRSFWMFVWDALQDMTLIIL 179
Query: 180 AVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKIT 239
VCAL+S+ VG+ATEGWPKG +DGLGI++SI LVV VTA SDYKQSLQFK+LD EKKKI
Sbjct: 180 MVCALLSVAVGLATEGWPKGMYDGLGIILSIFLVVMVTAVSDYKQSLQFKELDNEKKKIF 239
Query: 240 VQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVN 299
+ V R+G R+KISIYDL+ GDIVHL +GDQVPADGL++ G+S+LI+ESSL+GES+PV V+
Sbjct: 240 IHVTRDGRRQKISIYDLVVGDIVHLSIGDQVPADGLYIHGYSLLIDESSLSGESDPVYVS 299
Query: 300 ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 359
PF+L+GTKVQ+GS KM+VT VGMRT+WGKLM+TLSEGG+DETPLQVKLNGVATIIGK
Sbjct: 300 QDKPFILAGTKVQDGSAKMIVTAVGMRTEWGKLMSTLSEGGEDETPLQVKLNGVATIIGK 359
Query: 360 IGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLA 419
IGL FA++TF V++ K W DAL I+ +FA AVTI+VVAVPEGLPLA
Sbjct: 360 IGLVFAILTFLVLLVRFLIDKGMTVGLLKWYSTDALTIVNYFATAVTIIVVAVPEGLPLA 419
Query: 420 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE 479
VTLSLAFAMKK+MNDKALVRHL+ACETMGSA +IC+DKTGTLTTNHM V K I E K
Sbjct: 420 VTLSLAFAMKKLMNDKALVRHLSACETMGSAGTICTDKTGTLTTNHMVVDKIWISEVSKS 479
Query: 480 VDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL 539
V ++ + S + +S LLLQ IF NT EVV + K +LGTPTE AILEFGL L
Sbjct: 480 VTSNTISGELNSVVSSSTLSLLLQGIFENTSAEVVKEKDGKQTVLGTPTERAILEFGLGL 539
Query: 540 GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNG 599
GD AE +A VKVEPFNSVKK+M V+I LP G R CKGASEIIL CD ++ +G
Sbjct: 540 KGDHDAEYRACTKVKVEPFNSVKKKMAVLISLPNGTSRWFCKGASEIILQMCDMMVDGDG 599
Query: 600 EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKD 659
+PL+EA ++ +TI FAS+ALRTLCLA E+ ++ +A PT G+T I I GIKD
Sbjct: 600 NAIPLSEAQRKNILDTINSFASDALRTLCLAYKEVDDDIDDNADSPTSGFTLIAIFGIKD 659
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
P+RPGVK++V C SAGITVRMVTGDNINTAKAIA+ECGILT++G+AIEGPEF KS EE
Sbjct: 660 PVRPGVKDAVKTCMSAGITVRMVTGDNINTAKAIAKECGILTEDGVAIEGPEFHSKSTEE 719
Query: 720 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779
+ LI IQVMARS P+DKHTLV +LR EVV+VTGDGTNDAPALHEADIGLAMGIAG
Sbjct: 720 MRDLILNIQVMARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAG 779
Query: 780 TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
TEVAKESADVI+LDDNF+TI+ VA+WGR+VYINIQKFVQFQLTVN+VAL++NF SAC+ G
Sbjct: 780 TEVAKESADVIVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACIIG 839
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O22218|ACA4_ARATH Calcium-transporting ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=ACA4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1052 bits (2721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/840 (63%), Positives = 656/840 (78%), Gaps = 11/840 (1%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
M N L + +V+AKN S EA QRWR VKNR RRFR +L K + E + QE
Sbjct: 1 MSNLLRD--FEVEAKNPSLEARQRWRSSVSIVKNRTRRFRNIRDLDKLADYENKKHQIQE 58
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K RVA V +AAL FI EY + +EV +GF I DEL S+V +D K L GG
Sbjct: 59 KIRVAFFVQKAALHFIDAAA-RPEYKLTDEVKKAGFSIEADELASMVRKNDTKSLAQKGG 117
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
VE +A+K+S S+++GI +SE + R++I+G N++TE PAR F ++VWEALHD+TL+IL
Sbjct: 118 VEELAKKVSVSLSEGIRSSE--VPIREKIFGENRYTEKPARSFLMFVWEALHDITLIILM 175
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA+VS+ VG+ATEG+P+G +DG GI++SILLVV VTA SDYKQSLQF+DLDREKKKI V
Sbjct: 176 VCAVVSIGVGVATEGFPRGMYDGTGILLSILLVVMVTAISDYKQSLQFRDLDREKKKIIV 235
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+G R++ISI+DL+ GD+VHL +GDQVPADG+F+SG+++ I+ESSL+GESEP +VN
Sbjct: 236 QVTRDGSRQEISIHDLVVGDVVHLSIGDQVPADGIFISGYNLEIDESSLSGESEPSHVNK 295
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
PFLLSGTKVQNGS KMLVTTVGMRT+WGKLM TL +GG+DETPLQVKLNGVATIIGKI
Sbjct: 296 EKPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLMETLVDGGEDETPLQVKLNGVATIIGKI 355
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GL FAV+TF V+ K G+ WS +DAL +L++FAI+VTI+VVAVPEGLPLAV
Sbjct: 356 GLSFAVLTFVVLCIRFVLDKATSGSFTNWSSEDALTLLDYFAISVTIIVVAVPEGLPLAV 415
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE- 479
TLSLAFAMKK+M+D+ALVRHLAACETMGS+T IC+DKTGTLTTNHM V K IC++++E
Sbjct: 416 TLSLAFAMKKLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVWICDKVQER 475
Query: 480 VDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL 539
+ SK + S ++ LLQ IF NTG EVV + T+ILG+PTE AILEFGLLL
Sbjct: 476 QEGSKESFELELSEEVQST--LLQGIFQNTGSEVVKDKDGNTQILGSPTERAILEFGLLL 533
Query: 540 GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNG 599
GGDF +R+ KI+K+EPFNS KK+M V+I LP GG R CKGASEI+L C+ ++SNG
Sbjct: 534 GGDFNTQRKEHKILKIEPFNSDKKKMSVLIALPGGGARAFCKGASEIVLKMCENVVDSNG 593
Query: 600 EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKD 659
E VPL E + +++ IE FASEALRTLCL ++ S + +P GYT + +VGIKD
Sbjct: 594 ESVPLTEERITSISDIIEGFASEALRTLCLVYKDLDEAPSGE--LPDGGYTMVAVVGIKD 651
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
P+RPGV+E+V C++AGITVRMVTGDNI+TAKAIA+ECGI T+ G+AIEG EFR+ S E
Sbjct: 652 PVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGIYTEGGLAIEGSEFRDLSPHE 711
Query: 720 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779
+ +IPKIQVMARS P+DKHTLV +LR +GEVVAVTGDGTNDAPALHEADIGLAMGIAG
Sbjct: 712 MRAIIPKIQVMARSLPLDKHTLVSNLR-KIGEVVAVTGDGTNDAPALHEADIGLAMGIAG 770
Query: 780 TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
TEVAKE+ADVII+DDNF TIV VA+WGR+VYINIQKFVQFQLTVNVVALI+NF SAC+TG
Sbjct: 771 TEVAKENADVIIMDDNFKTIVNVARWGRAVYINIQKFVQFQLTVNVVALIINFVSACITG 830
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into small vacuoles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2RAS0|ACA5_ORYSJ Probable calcium-transporting ATPase 5, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os11g0140400 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1041 bits (2692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/840 (62%), Positives = 636/840 (75%), Gaps = 27/840 (3%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCG-FVKNRKRRFRFTANLSKRFEAEAIRRSNQ 59
++ YL E+F DV AKN SEEA +RWR+ G VKNR+RRFR+ +L +R +A RS Q
Sbjct: 4 LDRYLQEHF-DVPAKNPSEEAQRRWRQAVGTIVKNRRRRFRWVPDLDRRSLDKAKVRSTQ 62
Query: 60 EKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHG 119
EK RVA+ V QAAL F DEL I HD K LK+HG
Sbjct: 63 EKIRVALYVQQAALIF-----------------------SDDELALITSKHDSKALKMHG 99
Query: 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMIL 179
GV+GI++K+ +S GI S+ L+ R+ IYG+N++ E P+R FW++VW+A DMTL+IL
Sbjct: 100 GVDGISKKVRSSFDHGICASD--LDTRQNIYGVNRYAEKPSRSFWMFVWDAFQDMTLIIL 157
Query: 180 AVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKIT 239
VCAL+S+ VG+ATEGWPKG +DGLGI++SI LVV VTA SDYKQSLQFK+LD EKKKI
Sbjct: 158 MVCALLSVAVGLATEGWPKGMYDGLGIILSIFLVVMVTAVSDYKQSLQFKELDNEKKKIF 217
Query: 240 VQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVN 299
+ V R+G R+KISIYDL+ GDIVHL +GDQVPADGL++ G+S+LI+ESSL+GES+PV V+
Sbjct: 218 IHVTRDGRRQKISIYDLVVGDIVHLSIGDQVPADGLYIHGYSLLIDESSLSGESDPVYVS 277
Query: 300 ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 359
PF+L+GTKVQ+GS KM+VT VGMRT+WGKLM+TLSEGG+DETPLQVKLNGVAT+IGK
Sbjct: 278 QDKPFILAGTKVQDGSAKMIVTAVGMRTEWGKLMSTLSEGGEDETPLQVKLNGVATVIGK 337
Query: 360 IGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLA 419
IGL FA++TF V++ K W DAL I+ +FA AVTI+VVAVPEGLPLA
Sbjct: 338 IGLVFAILTFLVLLVRFLIDKGMTVGLLKWYSTDALTIVNYFATAVTIIVVAVPEGLPLA 397
Query: 420 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE 479
VTLSLAFAMKK+MNDKALVRHL+ACETMGSA +IC+DKTGTLTTN+M V K I E K
Sbjct: 398 VTLSLAFAMKKLMNDKALVRHLSACETMGSAGTICTDKTGTLTTNYMVVDKIWISEVSKS 457
Query: 480 VDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL 539
V ++ + S + + LLLQ IF NT EVV + K +LGTPTE AILEFGL L
Sbjct: 458 VTSNTISGELNSVVSSRTLSLLLQGIFENTSAEVVKEKDGKQTVLGTPTERAILEFGLGL 517
Query: 540 GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNG 599
G AE A VKVEPFNSVKK+M V+I LP G R CKGASEIIL CD ++ +G
Sbjct: 518 EGVHDAEYSACTKVKVEPFNSVKKKMAVLISLPSGTSRWFCKGASEIILQMCDMMVDGDG 577
Query: 600 EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKD 659
+PL+EA ++ +TI FAS+ALRTLCLA E+ ++ +A PT G+T I I GIKD
Sbjct: 578 NAIPLSEAQRKNILDTINSFASDALRTLCLAYKEVDDDIDDNADSPTSGFTLIAIFGIKD 637
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
P+RPGVK++V C SAGITVRMVTGDNINTAKAIA+ECGILT++G+AIEGPEF KS EE
Sbjct: 638 PVRPGVKDAVKTCMSAGITVRMVTGDNINTAKAIAKECGILTEDGVAIEGPEFHSKSPEE 697
Query: 720 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779
+ LIP IQVMARS P+DKHTLV +LR EVV+VTGDGTNDAPALHEADIGLAMGIAG
Sbjct: 698 MRDLIPNIQVMARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAG 757
Query: 780 TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
TEVAKESADVI+LDDNF+TI+ VA+WGR+VYINIQKFVQFQLTVN+VAL++NF SAC+TG
Sbjct: 758 TEVAKESADVIVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACITG 817
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q8RUN1|ACA3_ORYSJ Calcium-transporting ATPase 3, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os01g0939100 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1000 bits (2586), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/833 (61%), Positives = 631/833 (75%), Gaps = 10/833 (1%)
Query: 11 DVKAKNTSEEALQRWRKLCG-FVKNRKRRFRFTANLSKRFEAEAIRRSNQEKFRVAVLVS 69
+V AKN SEEA +RWR G VKNR+RRFR +L KR +AE RR QEK RVA+ V
Sbjct: 16 EVPAKNPSEEAQRRWRDAVGTLVKNRRRRFRMVPDLDKRSQAETQRRKIQEKLRVALFVQ 75
Query: 70 QAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGVEGIAEKLS 129
+AALQFI + +E+ +PE GF + +EL SIV GHD K L+ H GV+GIA K++
Sbjct: 76 KAALQFIDAVR-KTEHPLPELARQCGFSVSAEELASIVRGHDTKSLRFHNGVDGIARKVA 134
Query: 130 TSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVV 189
S+ DG+ + + L R E+YG N++TE P R FW+++W+A DMTL++LA CA VS+ +
Sbjct: 135 VSLADGVKSDDAGL--RAEVYGANQYTEKPPRTFWMFLWDASQDMTLLLLAFCAAVSVAI 192
Query: 190 GIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRR 249
G+ATEGWP G +DG+GI+++ILLVV +TA SDYKQSLQF+DLD+EKKKI VQV R+G+R+
Sbjct: 193 GLATEGWPSGMYDGVGIMLTILLVVMITAASDYKQSLQFRDLDKEKKKIDVQVTRDGYRQ 252
Query: 250 KISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGT 309
K+SIYD++ GDIVHL +GDQVPADGLF+ G+S +++ES+L+GESEPV+V+ N FLL GT
Sbjct: 253 KVSIYDIVVGDIVHLSIGDQVPADGLFIDGYSFVVDESNLSGESEPVHVSTANRFLLGGT 312
Query: 310 KVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTF 369
KVQ+GS +MLVT VGMRT+WG LM TLS+GG+DETPLQVKLNGVATIIGKIGL FAV+TF
Sbjct: 313 KVQDGSARMLVTAVGMRTEWGNLMETLSQGGEDETPLQVKLNGVATIIGKIGLAFAVLTF 372
Query: 370 AV-MVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAM 428
V M + L + G W DAL +L FFA+AVTI+VVAVPEGLPLAVTLSLAFAM
Sbjct: 373 TVLMARFLLGKAGAPGGLLRWRMVDALAVLNFFAVAVTIIVVAVPEGLPLAVTLSLAFAM 432
Query: 429 KKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPA 488
KK+M ++ALVRHL+ACETMGSA+ IC+DKTGTLTTNHM V K + + N+KG
Sbjct: 433 KKLMQERALVRHLSACETMGSASCICTDKTGTLTTNHMVVEKIWASGAAQTMSNAKGFDQ 492
Query: 489 FGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQ 548
SS+ + +K+LL+ +F+ +G EVV G+ + I+GTPTETAILEFGL + + E
Sbjct: 493 LTSSMSETFAKVLLEGVFHCSGSEVVRGKDGRHTIMGTPTETAILEFGLAVEKRARIEHT 552
Query: 549 ASKIVKVEPFNSVKKQMGVVIELPEGGF--RVHCKGASEIILAACDKFLNSNGEVVPLNE 606
+ +KVEPFNSVKK M VVI P G R KGASE++L+ C L+ G V L +
Sbjct: 553 GAGKLKVEPFNSVKKTMAVVIASPSAGGRPRAFLKGASEVVLSRCSLVLDGTGNVEKLTD 612
Query: 607 AAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVK 666
A + I+ FA EALRTLCLA ++ EGYT I + GIKDP+RPGV+
Sbjct: 613 AKAKRVASAIDAFACEALRTLCLAYQDVDGGGGDIP---GEGYTLIAVFGIKDPLRPGVR 669
Query: 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPK 726
E+VA C +AGI VRMVTGDNINTAKAIARECGILTD+GIAIEGPEFR K +++ ++IPK
Sbjct: 670 EAVATCHAAGINVRMVTGDNINTAKAIARECGILTDDGIAIEGPEFRNKDPDQMREIIPK 729
Query: 727 IQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKES 786
IQVMARS P+DKHTLV +LR EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKE+
Sbjct: 730 IQVMARSLPLDKHTLVTNLRGMFNEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKEN 789
Query: 787 ADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
ADVII+DDNFSTI+ VAKWGRSVYINIQKFVQFQLTVNVVAL+VNF SA TG
Sbjct: 790 ADVIIMDDNFSTIINVAKWGRSVYINIQKFVQFQLTVNVVALMVNFISASFTG 842
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 840 | ||||||
| 289540885 | 1019 | calcium ATPase [Trifolium repens] | 0.997 | 0.822 | 0.848 | 0.0 | |
| 224127276 | 1020 | predicted protein [Populus trichocarpa] | 0.998 | 0.822 | 0.855 | 0.0 | |
| 351720666 | 1019 | plasma membrane Ca2+-ATPase [Glycine max | 0.997 | 0.822 | 0.842 | 0.0 | |
| 297851218 | 1020 | autoinhibited Ca2+-ATPase 1 [Arabidopsis | 0.998 | 0.822 | 0.830 | 0.0 | |
| 225458828 | 1018 | PREDICTED: calcium-transporting ATPase 1 | 0.996 | 0.822 | 0.846 | 0.0 | |
| 356510560 | 1019 | PREDICTED: calcium-transporting ATPase 1 | 0.997 | 0.822 | 0.841 | 0.0 | |
| 30690083 | 1020 | autoinhibited Ca2+-ATPase 1 [Arabidopsis | 0.998 | 0.822 | 0.823 | 0.0 | |
| 225438996 | 1019 | PREDICTED: calcium-transporting ATPase 2 | 0.997 | 0.822 | 0.823 | 0.0 | |
| 516118 | 1020 | envelope Ca2+-ATPase [Arabidopsis thalia | 0.998 | 0.822 | 0.822 | 0.0 | |
| 509810 | 1020 | envelope Ca2+-ATPase [Arabidopsis thalia | 0.998 | 0.822 | 0.821 | 0.0 |
| >gi|289540885|gb|ADD09562.1| calcium ATPase [Trifolium repens] | Back alignment and taxonomy information |
|---|
Score = 1451 bits (3755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 712/839 (84%), Positives = 775/839 (92%), Gaps = 1/839 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLN+NF DVK KN+SEEALQRWRKLC VKNRKRRFRFTANLSKRFEAEAIRRSNQE
Sbjct: 1 MESYLNDNFGDVKPKNSSEEALQRWRKLCWVVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFIHGL LSSEY VPEEV A+GF+IC DE GSIV+G D+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFIHGLRLSSEYKVPEEVKAAGFEICADEAGSIVDGRDVKKLKIHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
+EGI +KLS+S+ DGISTSE LLNRRKEIYGINKFTESPARGFWV+VWEAL D TLMILA
Sbjct: 121 IEGITDKLSSSVNDGISTSESLLNRRKEIYGINKFTESPARGFWVFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA VSL VGI EGWPKGA DG+GIV SILLVVFVTATSDY+QSLQFKDLD+EKKKITV
Sbjct: 181 VCAFVSLAVGIIMEGWPKGAQDGIGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKITV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RNG+R+KISIYDLLPGDIVHL +GDQVPADGLF+SGFSV INESSLTGESEPVNV+
Sbjct: 241 QVTRNGYRQKISIYDLLPGDIVHLNIGDQVPADGLFLSGFSVCINESSLTGESEPVNVSD 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
LNPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 LNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAVVTF+V+VQGLF+RKLQEG+ WTWSGDDA+E++EFFAIAVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVVTFSVLVQGLFSRKLQEGSQWTWSGDDAMELVEFFAIAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+KACIC +IKEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKACICGKIKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
NS T F +P SA +LL+SIFNNTGGEVV E K EILG+PTETAILEFGL LG
Sbjct: 481 KNSTDTSDFSFDVPDSAIAILLESIFNNTGGEVVKNENGKIEILGSPTETAILEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDF ERQ SK+VKVEPFNS+KK+MGVV++LP+GG+R HCKGASEIILAACDKF++ NGE
Sbjct: 541 GDFHKERQVSKLVKVEPFNSIKKRMGVVLQLPDGGYRAHCKGASEIILAACDKFVDKNGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+E ++ HLN+TIEKFA+EALRTLCLA ++I +EF +PIP +GYTCIGIVGIKDP
Sbjct: 601 VVPLDEDSIRHLNDTIEKFANEALRTLCLAYVDIHDEFLVGSPIPIDGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGV+ESVAICR+AGITVRMVTGDNINTAKAIARECGILTD GIAIEGPEFRE S+E+L
Sbjct: 661 VRPGVRESVAICRAAGITVRMVTGDNINTAKAIARECGILTD-GIAIEGPEFREMSEEKL 719
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
+IPKIQVMARSSPMDKHTLVK LRTT EVV+VTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 720 LDIIPKIQVMARSSPMDKHTLVKQLRTTFEEVVSVTGDGTNDAPALHEADIGLAMGIAGT 779
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF+SACLTG
Sbjct: 780 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFTSACLTG 838
|
Source: Trifolium repens Species: Trifolium repens Genus: Trifolium Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224127276|ref|XP_002320033.1| predicted protein [Populus trichocarpa] gi|222860806|gb|EEE98348.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1438 bits (3722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 718/839 (85%), Positives = 779/839 (92%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
MENYLNENF DVKAKN+S+EALQRWRKLC VKNRKRRFRFTANLSKRFEAEAIRRSNQE
Sbjct: 1 MENYLNENFGDVKAKNSSDEALQRWRKLCWLVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K RVAVLVS+AALQFIH LNLSS+Y VP+EV +GFQIC DELGSIVEGHD+KKLK+HG
Sbjct: 61 KLRVAVLVSKAALQFIHCLNLSSDYVVPKEVEEAGFQICADELGSIVEGHDVKKLKIHGE 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
VEGIAEKLSTSI DGISTSE L+N RKEIYGINKFTESP RGF V+VWEAL DMTLMIL
Sbjct: 121 VEGIAEKLSTSINDGISTSEDLVNGRKEIYGINKFTESPPRGFLVFVWEALQDMTLMILG 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCALVSL+VGIA EGWPKG+HDGLGIV SILLVVFVTATSDYKQSLQFKDLDREKKKITV
Sbjct: 181 VCALVSLIVGIAMEGWPKGSHDGLGIVASILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RN R+KISIYDLLPGDIVHL +GDQVPADGLFVSGFSVLINESSLTGESEPVNVNA
Sbjct: 241 QVTRNAVRQKISIYDLLPGDIVHLFIGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
NPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 ANPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAVVTFAV+VQGL RKL+EGTHW WSGDDA E+LEFFA+AVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVVTFAVLVQGLCNRKLREGTHWIWSGDDAREMLEFFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVR+LAACETMGS+T+ICSDKTGTLTTNHMTV+KAC+ E +EV
Sbjct: 421 TLSLAFAMKKMMNDKALVRNLAACETMGSSTTICSDKTGTLTTNHMTVVKACVSGETREV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+S+ T +FGS+IP A +LL+SIFNNTGGEVV+ E K +ILGTPTETA+LEFGLLLG
Sbjct: 481 GSSESTTSFGSAIPDLAKSVLLESIFNNTGGEVVVNEERKVQILGTPTETALLEFGLLLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GD + +++ SKIVKVEPFNS KK+MGVVIELP GGFR HCKGASEI+LAACDK ++SNG
Sbjct: 541 GDSRQKQEKSKIVKVEPFNSTKKRMGVVIELPNGGFRAHCKGASEIVLAACDKVIDSNGV 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+EA++NHLN+TIE+FASE+LRTLCLA +EIGNE+S ++PIP++GYTCI IVGIKDP
Sbjct: 601 VVPLDEASINHLNDTIERFASESLRTLCLAYLEIGNEYSDESPIPSKGYTCIAIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAICRSAGI VRMVTGDN+ TAKAIARECGILTD+GIAIEGP FREKS+EEL
Sbjct: 661 VRPGVKESVAICRSAGIVVRMVTGDNLTTAKAIARECGILTDDGIAIEGPAFREKSEEEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
+LIPKIQVMARSSP+DKH LV+HLRTT EVVAVTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 721 QELIPKIQVMARSSPLDKHALVRHLRTTFQEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG
Sbjct: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|351720666|ref|NP_001237184.1| plasma membrane Ca2+-ATPase [Glycine max] gi|11066056|gb|AAG28436.1|AF195029_1 plasma membrane Ca2+-ATPase [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1430 bits (3701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 707/839 (84%), Positives = 766/839 (91%), Gaps = 1/839 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME YL+ENF DVK KN+SEEALQRWRK C VKN KRRFRFTANLSKRFEAEAIRRSNQE
Sbjct: 1 MEIYLSENFGDVKPKNSSEEALQRWRKACWLVKNHKRRFRFTANLSKRFEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAA+QFIHGLNLSSEYTVPEEV A+GF+IC DELGSIVEG D KKLK HGG
Sbjct: 61 KFRVAVLVSQAAIQFIHGLNLSSEYTVPEEVKAAGFEICADELGSIVEGRDSKKLKSHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V+ I KL+TS+ DGISTSEHL+N+RKEIYG+NKF ESPARGFWVYVWE+L D TLMILA
Sbjct: 121 VDAITNKLNTSVDDGISTSEHLVNQRKEIYGVNKFAESPARGFWVYVWESLQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCALVSLVVGI EGWPKGA DG+GIV SILLVVFVTATSDY+QSLQFKDLD+EKKKITV
Sbjct: 181 VCALVSLVVGIIMEGWPKGAQDGIGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKITV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RN R+K+S+YDLLPGDIVHL +GDQVPADGLFVSGFSVLINESSLTGESEPVNV+
Sbjct: 241 QVTRNSCRQKLSMYDLLPGDIVHLNIGDQVPADGLFVSGFSVLINESSLTGESEPVNVSE 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
LNPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 LNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAVVTF+V+VQGLF+RKL+EG+ W WSGDDA++I+EFFAIAVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVVTFSVLVQGLFSRKLREGSQWMWSGDDAMQIVEFFAIAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+KA IC +IKEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKAYICGKIKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ SK F S I SA +LL+SIFNNTGGEVV + K EILG+PTETA+LEFGL LG
Sbjct: 481 NGSKVYSDFSSDIHDSALAILLESIFNNTGGEVVKNKDEKIEILGSPTETALLEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDF ERQ SK+VKVEPFNS+KK+MGVV++LP+GGFR HCKGASEIILA+CDK ++S+GE
Sbjct: 541 GDFHKERQRSKLVKVEPFNSIKKRMGVVLQLPDGGFRAHCKGASEIILASCDKVVDSSGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VV LNE ++NHLN IE FA EALRTLCLA ++I +EFS IPT GYTCIGIVGIKDP
Sbjct: 601 VVALNEDSINHLNNMIETFAGEALRTLCLAYLDIHDEFSVGTAIPTRGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGV+ESVAICRSAGI VRMVTGDNINTAKAIARECGILTD GIAIEGPEFREKS+EEL
Sbjct: 661 VRPGVRESVAICRSAGIAVRMVTGDNINTAKAIARECGILTD-GIAIEGPEFREKSEEEL 719
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
+IPKIQVMARSSPMDKHTLVKHLRTT EVV+VTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 720 LDIIPKIQVMARSSPMDKHTLVKHLRTTFQEVVSVTGDGTNDAPALHEADIGLAMGIAGT 779
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
EVAKESADVIILDDNFSTIVTVAKWGRSVY+NIQKFVQFQLTVNVVALIVNFSSACLTG
Sbjct: 780 EVAKESADVIILDDNFSTIVTVAKWGRSVYVNIQKFVQFQLTVNVVALIVNFSSACLTG 838
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297851218|ref|XP_002893490.1| autoinhibited Ca2+-ATPase 1 [Arabidopsis lyrata subsp. lyrata] gi|297339332|gb|EFH69749.1| autoinhibited Ca2+-ATPase 1 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1419 bits (3672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 697/839 (83%), Positives = 759/839 (90%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVK KN+S+EALQRWRKLC VKN KRRFRFTANLSKR EAEAIRRSNQE
Sbjct: 1 MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFI+ L LSSEY VPEEV +GF+ICPDELGSIVEGHD+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFINSLKLSSEYIVPEEVRQAGFEICPDELGSIVEGHDVKKLKIHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EG+ EKLSTSI GISTSE LL+ RKEIYGINKFTESP RGFW++VWEAL D TLMILA
Sbjct: 121 TEGLTEKLSTSIASGISTSEDLLSVRKEIYGINKFTESPTRGFWLFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
CA VSL+VGI EGWP GAHDGLGIV SILLVVFVTATSDYKQSLQFKDLD EKKKI V
Sbjct: 181 ACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDYKQSLQFKDLDAEKKKIVV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+ R+KISIYDLLPGD+VHL +GDQ+PADGLF+SGFSVLINESSLTGESEPV+V+
Sbjct: 241 QVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESEPVSVSV 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
+PFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 EHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAV+TFAV+VQGL +K + +HW W+GD+ + +LE+FA+AVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVITFAVLVQGLANQKRLDASHWIWTGDELMAMLEYFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVR+LAACETMGSAT+ICSDKTGTLTTNHMTV+KACICE+ KEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACICEQAKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ S F S IP SA KLLLQSIF NTGGE+V+G+GNKTEILGTPTETA+LEFGL LG
Sbjct: 481 NVSDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKTEILGTPTETALLEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQ RQAS +VKVEPFNS KK+MGVVIELPEG FR HCKGASEI+L +CDK++N +GE
Sbjct: 541 GDFQEVRQASNVVKVEPFNSTKKRMGVVIELPEGHFRAHCKGASEIVLDSCDKYINKDGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPLNE + HL IE+FASEALRTLCLA EIG+EFS +APIP+ GYTCIGIVGIKDP
Sbjct: 601 VVPLNEESTGHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAIC+SAGITVRMVTGDN+ TAKAIARECGILTD+GIAIEGPEFREKSDEEL
Sbjct: 661 VRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFREKSDEEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPK+QVMARSSPMDKHTLV+ LRT EVVAVTGDGTNDAPALHEADIGLAMGI+GT
Sbjct: 721 LKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISGT 780
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF SACLTG
Sbjct: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFLSACLTG 839
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225458828|ref|XP_002285297.1| PREDICTED: calcium-transporting ATPase 1, chloroplastic-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1413 bits (3657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 710/839 (84%), Positives = 780/839 (92%), Gaps = 2/839 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLN+NF VK KN+SEEALQRWRKLC VKN KRRFRFTANLSKRFEA+AIRRSNQE
Sbjct: 1 MESYLNDNFGGVKPKNSSEEALQRWRKLCWVVKNPKRRFRFTANLSKRFEAQAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFIHGL SS+Y PEEV A+GFQIC DELGSIVEGHD+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFIHGL--SSDYVAPEEVTAAGFQICADELGSIVEGHDLKKLKIHGG 118
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V+GIAEKLSTS T+GI ++ LLN+RKEIYGINKFTE+ GFWV+VWEALHDMTLMILA
Sbjct: 119 VQGIAEKLSTSTTNGIPMADDLLNKRKEIYGINKFTETKVPGFWVFVWEALHDMTLMILA 178
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA VSL+VGI EGWPKGAHDGLGIV SILLVVFVTA SDY+QSLQFKDLD EKKKITV
Sbjct: 179 VCAFVSLLVGIIMEGWPKGAHDGLGIVASILLVVFVTAISDYRQSLQFKDLDTEKKKITV 238
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+G R+KISIYDL+PGDIVHL +GDQVPADGLFV GFS+LINESSLTGESEPV+VN+
Sbjct: 239 QVTRDGQRQKISIYDLVPGDIVHLSIGDQVPADGLFVLGFSLLINESSLTGESEPVHVNS 298
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
NPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK+
Sbjct: 299 ENPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKL 358
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFA VTFAV+VQGLF+RKL+EG+HW+WSGDDALE+LEFFA+AVTIVVVAVPEGLPLAV
Sbjct: 359 GLFFAAVTFAVLVQGLFSRKLREGSHWSWSGDDALEMLEFFAVAVTIVVVAVPEGLPLAV 418
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMM+DKALVRHLAACETMGSATSICSDKTGTLTTNHMTV+K CIC +IKEV
Sbjct: 419 TLSLAFAMKKMMHDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVVKVCICGKIKEV 478
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+S+ T +F S IP A ++LLQSIFNNTGGE+V + NKTEILGTPTE A+LEFGLLLG
Sbjct: 479 SSSEETSSFCSGIPDFAVRILLQSIFNNTGGEIVTNKDNKTEILGTPTEAALLEFGLLLG 538
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQAERQASK+VKVEPFNS KK+MGVV+E+PEGGFR H KGASEI+LA+CDK ++SNG+
Sbjct: 539 GDFQAERQASKLVKVEPFNSAKKRMGVVLEIPEGGFRAHSKGASEIVLASCDKVIDSNGD 598
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPLNEA+ NHL +TIE+FASEALRTLCLA ME+G+EFSA++P+P++GYTCIGIVGIKDP
Sbjct: 599 VVPLNEASFNHLKDTIERFASEALRTLCLAYMELGSEFSAESPLPSKGYTCIGIVGIKDP 658
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAICRSAGI+VRMVTGDNINTAKAIARECGILTD GIAIEGP FREKS+EEL
Sbjct: 659 VRPGVKESVAICRSAGISVRMVTGDNINTAKAIARECGILTDEGIAIEGPVFREKSEEEL 718
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPKIQVMARSSP+DKH LVKHLRT L EVVAVTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 719 QKLIPKIQVMARSSPLDKHILVKHLRTALEEVVAVTGDGTNDAPALHEADIGLAMGIAGT 778
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
EVAKESADVII+DDNFSTIVTV KWGRS+YINIQKFVQFQLTVN+VALIVNFSSACLTG
Sbjct: 779 EVAKESADVIIMDDNFSTIVTVGKWGRSIYINIQKFVQFQLTVNIVALIVNFSSACLTG 837
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356510560|ref|XP_003524005.1| PREDICTED: calcium-transporting ATPase 1, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1412 bits (3654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 706/839 (84%), Positives = 765/839 (91%), Gaps = 1/839 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YL+ENF DVK KN+SEEALQRWRK C VKN KRRFRFTANLSKRFEAEAIRRSNQE
Sbjct: 1 MESYLSENFGDVKPKNSSEEALQRWRKACWLVKNHKRRFRFTANLSKRFEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFIHGLNLS+EYTVPEEV +GF+IC DELGSIVEG D+KKLK HGG
Sbjct: 61 KFRVAVLVSQAALQFIHGLNLSTEYTVPEEVKTAGFEICADELGSIVEGRDLKKLKSHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V+ I KL+TS+ DGISTS+HLLN+RKEIYG+NKF ESPARGFWV+VWEAL D TLMILA
Sbjct: 121 VDAITSKLNTSVDDGISTSQHLLNQRKEIYGVNKFAESPARGFWVFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCALVSLVVGI EGWPKGA DG+GIV SILLVVFVTATSDY+QSLQFKDLD+EKKKITV
Sbjct: 181 VCALVSLVVGIIMEGWPKGAQDGIGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKITV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RN R+K+SIYDLLPGDIVHL +GDQVPADG FVSGFSVLINESSLTGESEPVNV+
Sbjct: 241 QVTRNSCRQKLSIYDLLPGDIVHLNIGDQVPADGFFVSGFSVLINESSLTGESEPVNVSE 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
LNPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 LNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAVVTF+V+VQGLF+RKL+EG+ WTWSGDDA++I+EFFA+AVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVVTFSVLVQGLFSRKLREGSQWTWSGDDAMQIVEFFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+K CIC +IKEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKVCICGKIKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ SK + F S I SA +LL+SIFNNTGGEVV + K EILG+PTETA+LE GL LG
Sbjct: 481 NGSKVSSDFSSDIHDSALAVLLESIFNNTGGEVVKNKDEKIEILGSPTETALLELGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDF ERQ SK+VKVEPFNS KK+MGVV++LP+GGFR HCKGASEIILAACDK ++S+GE
Sbjct: 541 GDFLKERQRSKLVKVEPFNSTKKRMGVVLQLPDGGFRAHCKGASEIILAACDKVVDSSGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPLNE ++NHLN IE FA EALRTLCLA ++I +EFS PIPT GYT I IVGIKDP
Sbjct: 601 VVPLNEDSINHLNNMIETFAGEALRTLCLAYLDIDDEFSVGTPIPTRGYTFIAIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGV+ESVAICRSAGI VRMVTGDNINTAKAIARECGILTD GIAIEGPEFREKS+ EL
Sbjct: 661 VRPGVRESVAICRSAGIAVRMVTGDNINTAKAIARECGILTD-GIAIEGPEFREKSEVEL 719
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
+IPKIQVMARSSPMDKHTLVKHLRTT EVV+VTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 720 LDIIPKIQVMARSSPMDKHTLVKHLRTTFQEVVSVTGDGTNDAPALHEADIGLAMGIAGT 779
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG
Sbjct: 780 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 838
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30690083|ref|NP_849716.1| autoinhibited Ca2+-ATPase 1 [Arabidopsis thaliana] gi|30316378|sp|Q37145.3|ACA1_ARATH RecName: Full=Calcium-transporting ATPase 1, chloroplastic; AltName: Full=Ca(2+)-ATPase isoform 1; AltName: Full=Plastid envelope ATPase 1; Flags: Precursor gi|12320888|gb|AAG50579.1|AC079280_10 envelope Ca2+-ATPase [Arabidopsis thaliana] gi|332192757|gb|AEE30878.1| autoinhibited Ca2+-ATPase 1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1410 bits (3649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 691/839 (82%), Positives = 759/839 (90%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVK KN+S+EALQRWRKLC VKN KRRFRFTANLSKR EAEAIRRSNQE
Sbjct: 1 MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFI+ L LSSEYT+PEEV +GF+ICPDELGSIVEGHD+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFINSLKLSSEYTLPEEVRKAGFEICPDELGSIVEGHDLKKLKIHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EG+ EKLSTSI GISTSE LL+ RKEIYGIN+FTESP+RGFW++VWEAL D TLMILA
Sbjct: 121 TEGLTEKLSTSIASGISTSEDLLSVRKEIYGINQFTESPSRGFWLFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
CA VSL+VGI EGWP GAHDGLGIV SILLVVFVTATSDY+QSLQFKDLD EKKKI V
Sbjct: 181 ACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDAEKKKIVV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+ R+KISIYDLLPGD+VHL +GDQ+PADGLF+SGFSVLINESSLTGESEPV+V+
Sbjct: 241 QVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESEPVSVSV 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
+PFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 EHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAV+TFAV+VQGL +K + +HW W+ D+ + +LE+FA+AVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVITFAVLVQGLANQKRLDNSHWIWTADELMAMLEYFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVR+LAACETMGSAT+ICSDKTGTLTTNHMTV+KACICE+ KEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACICEQAKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ F S IP SA KLLLQSIF NTGGE+V+G+GNKTEILGTPTETA+LEFGL LG
Sbjct: 481 NGPDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKTEILGTPTETALLEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQ RQAS +VKVEPFNS KK+MGVVIELPE FR HCKGASEI+L +CDK++N +GE
Sbjct: 541 GDFQEVRQASNVVKVEPFNSTKKRMGVVIELPERHFRAHCKGASEIVLDSCDKYINKDGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+E + +HL IE+FASEALRTLCLA EIG+EFS +APIP+ GYTCIGIVGIKDP
Sbjct: 601 VVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAIC+SAGITVRMVTGDN+ TAKAIARECGILTD+GIAIEGPEFREKSDEEL
Sbjct: 661 VRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFREKSDEEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPK+QVMARSSPMDKHTLV+ LRT EVVAVTGDGTNDAPALHEADIGLAMGI+GT
Sbjct: 721 LKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISGT 780
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF SACLTG
Sbjct: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFLSACLTG 839
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225438996|ref|XP_002284429.1| PREDICTED: calcium-transporting ATPase 2, plasma membrane-type isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1408 bits (3644), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 691/839 (82%), Positives = 759/839 (90%), Gaps = 1/839 (0%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YL+ENFS VK K++S+E LQRWR LC VKN KRRFRFTANLSKR EA A+RR+NQE
Sbjct: 1 MESYLDENFSGVKPKHSSDEVLQRWRNLCSVVKNPKRRFRFTANLSKRGEAAAMRRTNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K R+AVLVS+AALQFI G+ +S +Y VPEE+ A+GFQIC DELGSIVEGHD+KKLK+HGG
Sbjct: 61 KLRIAVLVSKAALQFIQGVPVS-DYVVPEEIKAAGFQICADELGSIVEGHDVKKLKIHGG 119
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V+GIAEKLSTS T G++ LLN R+EIYGINKFTE+ ARGF V+VWEALHDMTL+ILA
Sbjct: 120 VDGIAEKLSTSTTYGLTADNKLLNHRQEIYGINKFTETQARGFLVFVWEALHDMTLIILA 179
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCALVSL+VGIA EGWP GAHDGLGIV SILLVV VTATSDY+QSLQF+DLD+EKKKI++
Sbjct: 180 VCALVSLIVGIAMEGWPVGAHDGLGIVASILLVVLVTATSDYRQSLQFRDLDKEKKKISI 239
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RNG+R K+SIYDLLPGDIVHL +GDQVPADGLFVSGF V I+ESSLTGESEPV V+A
Sbjct: 240 QVTRNGYRHKMSIYDLLPGDIVHLSIGDQVPADGLFVSGFCVSIDESSLTGESEPVMVSA 299
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
NPFLLSGTKVQ+GSCKM++TTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVAT IGKI
Sbjct: 300 ENPFLLSGTKVQDGSCKMMITTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATFIGKI 359
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GL FAVVTFAV+VQGLF RKL EGTHW+WSGDDALE+LEFFAIAVTIVVVAVPEGLPLAV
Sbjct: 360 GLVFAVVTFAVLVQGLFNRKLGEGTHWSWSGDDALEMLEFFAIAVTIVVVAVPEGLPLAV 419
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVRHLAACETMGSAT ICSDKTGTLTTNHMTV+K+CIC +K+V
Sbjct: 420 TLSLAFAMKKMMNDKALVRHLAACETMGSATCICSDKTGTLTTNHMTVVKSCICMNVKDV 479
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
D +F S IP S KLLLQSIFNN+GGEVVI + K EILG+PT+ A+LEFGL LG
Sbjct: 480 DRQSNASSFCSEIPDSTVKLLLQSIFNNSGGEVVINKEGKLEILGSPTDAALLEFGLFLG 539
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQ ERQA K++KVEPFNS KK+MGVV+ELPEGG R H KGASEIILAACDK ++SNGE
Sbjct: 540 GDFQGERQAPKLIKVEPFNSTKKRMGVVLELPEGGLRAHTKGASEIILAACDKMIDSNGE 599
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+EA+++HL TI +FASEALRTLCLA ME+ N FS + PIP GYTCIGIVGIKDP
Sbjct: 600 VVPLDEASIDHLKATINQFASEALRTLCLAYMELENGFSPNDPIPLSGYTCIGIVGIKDP 659
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD+GIAIEGP+FREKS+EEL
Sbjct: 660 VRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPDFREKSEEEL 719
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPKIQVMARSSP+DKHTLVKHLRTT GEVVAVTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 720 FKLIPKIQVMARSSPLDKHTLVKHLRTTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 779
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
EVAKESADVIILDDNFSTI TVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG
Sbjct: 780 EVAKESADVIILDDNFSTIATVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 838
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|516118|gb|AAD10212.1| envelope Ca2+-ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1407 bits (3641), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 690/839 (82%), Positives = 758/839 (90%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVK KN+S+EALQRWRKLC VKN KRRFRFTANLSKR EAEAIRRSNQE
Sbjct: 1 MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFI+ L LSSEYT+PEEV +GF+ICPDELGSIVEGHD+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFINSLKLSSEYTLPEEVRKAGFEICPDELGSIVEGHDLKKLKIHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EG+ EKLSTSI GISTSE LL+ RKEIYGIN+FTESP+RGFW++VWEAL D TLMILA
Sbjct: 121 TEGLTEKLSTSIASGISTSEDLLSVRKEIYGINQFTESPSRGFWLFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
CA VSL+VGI EGWP GAHDGLGIV SILLVVFVTATSDY+QSLQFKDLD EKKKI V
Sbjct: 181 ACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDAEKKKIVV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+ R+KISIYDLLPGD+VHL +GDQ+PADGLF+SGFSVLINESSLTGESEPV+V+
Sbjct: 241 QVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESEPVSVSV 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
+PFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 EHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAV+TFAV+VQGL +K + +HW W+ D+ + +LE+FA+AVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVITFAVLVQGLANQKRLDNSHWIWTADELMAMLEYFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVR+LAACETMGSAT+ICSDKTGTLTTNHMTV+KACICE+ KEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACICEQAKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ F S IP SA KLLLQSIF NTGGE+V+G+GNKTEILGTPTETA+LEFGL LG
Sbjct: 481 NGPDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKTEILGTPTETALLEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQ RQAS +VKVEPFNS KK+MGVVIELPE FR HCKGASEI+L +CDK++N +GE
Sbjct: 541 GDFQEVRQASNVVKVEPFNSTKKRMGVVIELPERHFRAHCKGASEIVLDSCDKYINKDGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+E + +HL IE+FASEALRTLCLA EIG+EFS +APIP+ GYTCIGIVGIKDP
Sbjct: 601 VVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAIC+SAGITVRMVTGDN+ TAKAIARECGILTD+GIAIEGPEFREKSDEEL
Sbjct: 661 VRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFREKSDEEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPK+QVMARSSPMDKHTLV+ LRT EVVAVTGDGTNDAPALHEADIGLAMGI+GT
Sbjct: 721 LKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISGT 780
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
EVAKESADVIILDDNFSTIV VAKWGRSVYINIQKFVQFQLTVNVVALIVNF SACLTG
Sbjct: 781 EVAKESADVIILDDNFSTIVIVAKWGRSVYINIQKFVQFQLTVNVVALIVNFLSACLTG 839
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|509810|gb|AAD10211.1| envelope Ca2+-ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1405 bits (3636), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 689/839 (82%), Positives = 757/839 (90%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVK KN+S+EALQRWRKLC VKN KRRFRFTANLSKR EAEAIRRSNQE
Sbjct: 1 MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFI+ L LSSEYT+ EEV +GF+ICPDELGSIVEGHD+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFINSLKLSSEYTLSEEVRKAGFEICPDELGSIVEGHDLKKLKIHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EG+ EKLSTSI GISTSE LL+ RKEIYGIN+FTESP+RGFW++VWEAL D TLMILA
Sbjct: 121 TEGLTEKLSTSIASGISTSEDLLSVRKEIYGINQFTESPSRGFWLFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
CA VSL+VGI EGWP GAHDGLGIV SILLVVFVTATSDY+QSLQFKDLD EKKKI V
Sbjct: 181 ACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDAEKKKIVV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+ R+KISIYDLLPGD+VHL +GDQ+PADGLF+SGFSVLINESSLTGESEPV+V+
Sbjct: 241 QVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESEPVSVSV 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
+PFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 EHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420
GLFFAV+TFAV+VQGL +K + +HW W+ D+ + +LE+FA+AVTIVVVAVPEGLPLAV
Sbjct: 361 GLFFAVITFAVLVQGLANQKRLDNSHWIWTADELMAMLEYFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVR+LAACETMGSAT+ICSDKTGTLTTNHMTV+KACICE+ KEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACICEQAKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ F S IP SA KLLLQSIF NTGGE+V+G+GNKTEILGTPTETA+LEFGL LG
Sbjct: 481 NGPDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKTEILGTPTETALLEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQ RQAS +VKVEPFNS KK+MGVVIELPE FR HCKGASEI+L +CDK++N +GE
Sbjct: 541 GDFQEVRQASNVVKVEPFNSTKKRMGVVIELPERHFRAHCKGASEIVLDSCDKYINKDGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+E + +HL IE+FASEALRTLCLA EIG+EFS +APIP+ GYTCIGIVGIKDP
Sbjct: 601 VVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAIC+SAGITVRMVTGDN+ TAKAIARECGILTD+GIAIEGPEFREKSDEEL
Sbjct: 661 VRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFREKSDEEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPK+QVMARSSPMDKHTLV+ LRT EVVAVTGDGTNDAPALHEADIGLAMGI+GT
Sbjct: 721 LKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISGT 780
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
EVAKESADVIILDDNFSTIV VAKWGRSVYINIQKFVQFQLTVNVVALIVNF SACLTG
Sbjct: 781 EVAKESADVIILDDNFSTIVIVAKWGRSVYINIQKFVQFQLTVNVVALIVNFLSACLTG 839
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 840 | ||||||
| TAIR|locus:2029794 | 1020 | ACA1 "autoinhibited Ca2+-ATPas | 0.998 | 0.822 | 0.811 | 0.0 | |
| TAIR|locus:2120096 | 1014 | ACA2 "calcium ATPase 2" [Arabi | 0.994 | 0.823 | 0.789 | 0.0 | |
| TAIR|locus:2059201 | 1015 | ACA7 "auto-regulated Ca2+-ATPa | 0.994 | 0.822 | 0.781 | 0.0 | |
| TAIR|locus:2062673 | 1030 | ACA4 ""autoinhibited Ca(2+)-AT | 0.986 | 0.804 | 0.626 | 1.1e-270 | |
| TAIR|locus:2082528 | 1025 | ACA11 "autoinhibited Ca2+-ATPa | 0.984 | 0.806 | 0.624 | 3.7e-270 | |
| TAIR|locus:2175579 | 1074 | ACA8 ""autoinhibited Ca2+ -ATP | 0.965 | 0.755 | 0.472 | 3e-188 | |
| TAIR|locus:2123924 | 1069 | ACA10 "autoinhibited Ca(2+)-AT | 0.979 | 0.769 | 0.461 | 1.5e-186 | |
| TAIR|locus:2094726 | 1086 | ACA9 "autoinhibited Ca(2+)-ATP | 0.976 | 0.755 | 0.462 | 2.7e-180 | |
| TAIR|locus:2087363 | 1033 | AT3G63380 [Arabidopsis thalian | 0.938 | 0.762 | 0.424 | 5.5e-164 | |
| DICTYBASE|DDB_G0289473 | 1077 | DDB_G0289473 "Ca2+-ATPase" [Di | 0.535 | 0.417 | 0.384 | 6.8e-160 |
| TAIR|locus:2029794 ACA1 "autoinhibited Ca2+-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3504 (1238.5 bits), Expect = 0., P = 0.
Identities = 681/839 (81%), Positives = 748/839 (89%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVK KN+S+EALQRWRKLC VKN KRRFRFTANLSKR EAEAIRRSNQE
Sbjct: 1 MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
KFRVAVLVSQAALQFI+ L LSSEYT+PEEV +GF+ICPDELGSIVEGHD+KKLK+HGG
Sbjct: 61 KFRVAVLVSQAALQFINSLKLSSEYTLPEEVRKAGFEICPDELGSIVEGHDLKKLKIHGG 120
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EG+ EKLSTSI GISTSE LL+ RKEIYGIN+FTESP+RGFW++VWEAL D TLMILA
Sbjct: 121 TEGLTEKLSTSIASGISTSEDLLSVRKEIYGINQFTESPSRGFWLFVWEALQDTTLMILA 180
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
CA VSL+VGI EGWP GAHDGLGIV SILLVVFVTATSDY+QSLQFKDLD EKKKI V
Sbjct: 181 ACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDAEKKKIVV 240
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+ R+KISIYDLLPGD+VHL +GDQ+PADGLF+SGFSVLINESSLTGESEPV+V+
Sbjct: 241 QVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESEPVSVSV 300
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
+PFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI
Sbjct: 301 EHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFXXXXXXXXXXXPEGLPLAV 420
GLFFAV+TFAV+VQGL +K + +HW W+ D+ + +LE+F PEGLPLAV
Sbjct: 361 GLFFAVITFAVLVQGLANQKRLDNSHWIWTADELMAMLEYFAVAVTIVVVAVPEGLPLAV 420
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVR+LAACETMGSAT+ICSDKTGTLTTNHMTV+KACICE+ KEV
Sbjct: 421 TLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACICEQAKEV 480
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
+ F S IP SA KLLLQSIF NTGGE+V+G+GNKTEILGTPTETA+LEFGL LG
Sbjct: 481 NGPDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKTEILGTPTETALLEFGLSLG 540
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GDFQ RQAS +VKVEPFNS KK+MGVVIELPE FR HCKGASEI+L +CDK++N +GE
Sbjct: 541 GDFQEVRQASNVVKVEPFNSTKKRMGVVIELPERHFRAHCKGASEIVLDSCDKYINKDGE 600
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VVPL+E + +HL IE+FASEALRTLCLA EIG+EFS +APIP+ GYTCIGIVGIKDP
Sbjct: 601 VVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGIVGIKDP 660
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGVKESVAIC+SAGITVRMVTGDN+ TAKAIARECGILTD+GIAIEGPEFREKSDEEL
Sbjct: 661 VRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFREKSDEEL 720
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
KLIPK+QVMARSSPMDKHTLV+ LRT EVVAVTGDGTNDAPALHEADIGLAMGI+GT
Sbjct: 721 LKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISGT 780
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF SACLTG
Sbjct: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFLSACLTG 839
|
|
| TAIR|locus:2120096 ACA2 "calcium ATPase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3413 (1206.5 bits), Expect = 0., P = 0.
Identities = 663/840 (78%), Positives = 745/840 (88%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLNENF DVKAK++SEE L++WR LCG VKN KRRFRFTANLSKR+EA A+RR+NQE
Sbjct: 1 MESYLNENF-DVKAKHSSEEVLEKWRNLCGVVKNPKRRFRFTANLSKRYEAAAMRRTNQE 59
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K R+AVLVS+AA QFI G++ S+YTVPE+V A+GF+IC DELGSIVE HD+KKLK HGG
Sbjct: 60 KLRIAVLVSKAAFQFISGVS-PSDYTVPEDVKAAGFEICADELGSIVESHDVKKLKFHGG 118
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V+G+A KL S TDG+ST L++R+E++GINKF ES RGFWV+VWEAL DMTLMIL
Sbjct: 119 VDGLAGKLKASPTDGLSTEAAQLSQRQELFGINKFAESEMRGFWVFVWEALQDMTLMILG 178
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA VSL+VGIATEGWPKG+HDGLGI SILLVVFVTATSDY+QSLQF+DLD+EKKKITV
Sbjct: 179 VCAFVSLIVGIATEGWPKGSHDGLGIAASILLVVFVTATSDYRQSLQFRDLDKEKKKITV 238
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV RNGFR+K+SIYDLLPGDIVHL +GDQVPADGLF+SGFSV+I+ESSLTGESEPV VNA
Sbjct: 239 QVTRNGFRQKLSIYDLLPGDIVHLAIGDQVPADGLFLSGFSVVIDESSLTGESEPVMVNA 298
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
NPFL+SGTKVQ+GSCKM++TTVGMRTQWGKLMATL+EGGDDETPLQVKLNGVATIIGKI
Sbjct: 299 QNPFLMSGTKVQDGSCKMMITTVGMRTQWGKLMATLTEGGDDETPLQVKLNGVATIIGKI 358
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFXXXXXXXXXXXPEGLPLAV 420
GLFFAVVTFAV+VQG+F RKL GTHW WSGD+ALE+LE+F PEGLPLAV
Sbjct: 359 GLFFAVVTFAVLVQGMFMRKLSTGTHWVWSGDEALELLEYFAIAVTIVVVAVPEGLPLAV 418
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+K+CIC +++V
Sbjct: 419 TLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKSCICMNVQDV 478
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
N KG+ + S IP SA KLL+QSIFNNTGGEVV+ + KTE+LGTPTETAILE GL LG
Sbjct: 479 AN-KGS-SLQSEIPESAVKLLIQSIFNNTGGEVVVNKHGKTELLGTPTETAILELGLSLG 536
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGG-FRVHCKGASEIILAACDKFLNSNG 599
G FQ ER++ K++KVEPFNS KK+MGVVIELPEGG R H KGASEI+LAACDK +NS+G
Sbjct: 537 GKFQEERKSYKVIKVEPFNSTKKRMGVVIELPEGGRMRAHTKGASEIVLAACDKVVNSSG 596
Query: 600 EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKD 659
EVVPL+E ++ +LN TI +FA+EALRTLCLA M+I FS D IP G+TC+GIVGIKD
Sbjct: 597 EVVPLDEESIKYLNVTINEFANEALRTLCLAYMDIEGGFSPDDAIPASGFTCVGIVGIKD 656
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
P+RPGVKESV +CR AGITVRMVTGDNINTAKAIARECGILTD+GIAIEGP FREK+ EE
Sbjct: 657 PVRPGVKESVELCRRAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPVFREKNQEE 716
Query: 720 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779
L +LIPKIQVMARSSPMDKHTLVK LRTT EVVAVTGDGTNDAPALHEADIGLAMGIAG
Sbjct: 717 LLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAG 776
Query: 780 TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVAL+VNFSSACLTG
Sbjct: 777 TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALVVNFSSACLTG 836
|
|
| TAIR|locus:2059201 ACA7 "auto-regulated Ca2+-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3347 (1183.3 bits), Expect = 0., P = 0.
Identities = 657/841 (78%), Positives = 737/841 (87%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
ME+YLN NF DVKAK++SEE L++WR LC VKN KRRFRFTANLSKR+EA A+RR+NQE
Sbjct: 1 MESYLNSNF-DVKAKHSSEEVLEKWRNLCSVVKNPKRRFRFTANLSKRYEAAAMRRTNQE 59
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K R+AVLVS+AA QFI G++ S+Y VPEEV A+GF IC DELGSIVEGHD+KKLK HGG
Sbjct: 60 KLRIAVLVSKAAFQFISGVS-PSDYKVPEEVKAAGFDICADELGSIVEGHDVKKLKFHGG 118
Query: 121 VEGIAEKLSTSITDGISTSE-HLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMIL 179
V+G++ KL G+ST E L++R+E++GINKF ES R FWV+VWEAL DMTLMIL
Sbjct: 119 VDGLSGKLKACPNAGLSTGEPEQLSKRQELFGINKFAESELRSFWVFVWEALQDMTLMIL 178
Query: 180 AVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKIT 239
VCA VSL+VGIATEGWP+G+HDGLGIV SILLVVFVTATSDY+QSLQF+DLD+EKKKIT
Sbjct: 179 GVCAFVSLIVGIATEGWPQGSHDGLGIVASILLVVFVTATSDYRQSLQFRDLDKEKKKIT 238
Query: 240 VQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVN 299
VQV RNGFR+K+SIYDLLPGD+VHL +GDQVPADGLF+SGFSV+I+ESSLTGESEPV V
Sbjct: 239 VQVTRNGFRQKMSIYDLLPGDVVHLAIGDQVPADGLFLSGFSVVIDESSLTGESEPVMVT 298
Query: 300 ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 359
A NPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK
Sbjct: 299 AQNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 358
Query: 360 IGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFXXXXXXXXXXXPEGLPLA 419
IGL FA+VTFAV+VQG+F RKL G HW WSGDDALE+LE+F PEGLPLA
Sbjct: 359 IGLSFAIVTFAVLVQGMFMRKLSLGPHWWWSGDDALELLEYFAIAVTIVVVAVPEGLPLA 418
Query: 420 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE 479
VTLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+K+CIC +++
Sbjct: 419 VTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKSCICMNVQD 478
Query: 480 VDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL 539
V SK + + S IP +A KLLLQ IFNNTGGEVV+ E KTEILGTPTETAILE GL L
Sbjct: 479 VA-SKSS-SLQSDIPEAALKLLLQLIFNNTGGEVVVNERGKTEILGTPTETAILELGLSL 536
Query: 540 GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGG-FRVHCKGASEIILAACDKFLNSN 598
GG FQ ERQ++K++KVEPFNS KK+MGVVIELPEGG R H KGASEI+LAACDK +NS+
Sbjct: 537 GGKFQEERQSNKVIKVEPFNSTKKRMGVVIELPEGGRIRAHTKGASEIVLAACDKVINSS 596
Query: 599 GEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIK 658
GEVVPL++ ++ LN TI++FA+EALRTLCLA M+I + FSAD IP +G+TCIGIVGIK
Sbjct: 597 GEVVPLDDESIKFLNVTIDEFANEALRTLCLAYMDIESGFSADEGIPEKGFTCIGIVGIK 656
Query: 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDE 718
DP+RPGV+ESV +CR AGI VRMVTGDNINTAKAIARECGILTD+GIAIEGP FREK+ E
Sbjct: 657 DPVRPGVRESVELCRRAGIMVRMVTGDNINTAKAIARECGILTDDGIAIEGPVFREKNQE 716
Query: 719 ELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIA 778
E+ +LIPKIQVMARSSPMDKHTLVK LRTT EVVAVTGDGTNDAPALHEADIGLAMGIA
Sbjct: 717 EMLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIA 776
Query: 779 GTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT 838
GTEVAKE ADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT
Sbjct: 777 GTEVAKEIADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT 836
Query: 839 G 839
G
Sbjct: 837 G 837
|
|
| TAIR|locus:2062673 ACA4 ""autoinhibited Ca(2+)-ATPase, isoform 4"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2603 (921.4 bits), Expect = 1.1e-270, P = 1.1e-270
Identities = 526/840 (62%), Positives = 645/840 (76%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
M N L + F +V+AKN S EA QRWR VKNR RRFR +L K + E + QE
Sbjct: 1 MSNLLRD-F-EVEAKNPSLEARQRWRSSVSIVKNRTRRFRNIRDLDKLADYENKKHQIQE 58
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K RVA V +AAL FI EY + +EV +GF I DEL S+V +D K L GG
Sbjct: 59 KIRVAFFVQKAALHFIDAA-ARPEYKLTDEVKKAGFSIEADELASMVRKNDTKSLAQKGG 117
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
VE +A+K+S S+++GI +SE + R++I+G N++TE PAR F ++VWEALHD+TL+IL
Sbjct: 118 VEELAKKVSVSLSEGIRSSEVPI--REKIFGENRYTEKPARSFLMFVWEALHDITLIILM 175
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA+VS+ VG+ATEG+P+G +DG GI++SILLVV VTA SDYKQSLQF+DLDREKKKI V
Sbjct: 176 VCAVVSIGVGVATEGFPRGMYDGTGILLSILLVVMVTAISDYKQSLQFRDLDREKKKIIV 235
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+G R++ISI+DL+ GD+VHL +GDQVPADG+F+SG+++ I+ESSL+GESEP +VN
Sbjct: 236 QVTRDGSRQEISIHDLVVGDVVHLSIGDQVPADGIFISGYNLEIDESSLSGESEPSHVNK 295
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
PFLLSGTKVQNGS KMLVTTVGMRT+WGKLM TL +GG+DETPLQVKLNGVATIIGKI
Sbjct: 296 EKPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLMETLVDGGEDETPLQVKLNGVATIIGKI 355
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFXXXXXXXXXXXPEGLPLAV 420
GL FAV+TF V+ K G+ WS +DAL +L++F PEGLPLAV
Sbjct: 356 GLSFAVLTFVVLCIRFVLDKATSGSFTNWSSEDALTLLDYFAISVTIIVVAVPEGLPLAV 415
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE- 479
TLSLAFAMKK+M+D+ALVRHLAACETMGS+T IC+DKTGTLTTNHM V K IC++++E
Sbjct: 416 TLSLAFAMKKLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVWICDKVQER 475
Query: 480 VDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL 539
+ SK +F + LLQ IF NTG EVV + T+ILG+PTE AILEFGLLL
Sbjct: 476 QEGSK--ESFELELSEEVQSTLLQGIFQNTGSEVVKDKDGNTQILGSPTERAILEFGLLL 533
Query: 540 GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNG 599
GGDF +R+ KI+K+EPFNS KK+M V+I LP GG R CKGASEI+L C+ ++SNG
Sbjct: 534 GGDFNTQRKEHKILKIEPFNSDKKKMSVLIALPGGGARAFCKGASEIVLKMCENVVDSNG 593
Query: 600 EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKD 659
E VPL E + +++ IE FASEALRTLCL ++ S + +P GYT + +VGIKD
Sbjct: 594 ESVPLTEERITSISDIIEGFASEALRTLCLVYKDLDEAPSGE--LPDGGYTMVAVVGIKD 651
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
P+RPGV+E+V C++AGITVRMVTGDNI+TAKAIA+ECGI T+ G+AIEG EFR+ S E
Sbjct: 652 PVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGIYTEGGLAIEGSEFRDLSPHE 711
Query: 720 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779
+ +IPKIQVMARS P+DKHTLV +LR +GEVVAVTGDGTNDAPALHEADIGLAMGIAG
Sbjct: 712 MRAIIPKIQVMARSLPLDKHTLVSNLRK-IGEVVAVTGDGTNDAPALHEADIGLAMGIAG 770
Query: 780 TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
TEVAKE+ADVII+DDNF TIV VA+WGR+VYINIQKFVQFQLTVNVVALI+NF SAC+TG
Sbjct: 771 TEVAKENADVIIMDDNFKTIVNVARWGRAVYINIQKFVQFQLTVNVVALIINFVSACITG 830
|
|
| TAIR|locus:2082528 ACA11 "autoinhibited Ca2+-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2598 (919.6 bits), Expect = 3.7e-270, P = 3.7e-270
Identities = 524/839 (62%), Positives = 638/839 (76%)
Query: 1 MENYLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQE 60
M N L + F +V +KN S EA QRWR G VKNR RRFR +NL K E E R QE
Sbjct: 1 MSNLLKD-F-EVASKNPSLEARQRWRSSVGLVKNRARRFRMISNLDKLAENEKKRCQIQE 58
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
K RV V +AA QFI EY + +EV +GF + DEL S+V HD K L GG
Sbjct: 59 KIRVVFYVQKAAFQFIDA-GARPEYKLTDEVKKAGFYVEADELASMVRNHDTKSLTKIGG 117
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
EGIA+K+S S+ +G+ +SE L+ R++IYG N++TE PAR F +VWEAL D+TL+IL
Sbjct: 118 PEGIAQKVSVSLAEGVRSSE--LHIREKIYGENRYTEKPARSFLTFVWEALQDITLIILM 175
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
VCA+VS+ VG+ATEG+PKG +DG GI++SI+LVV VTA SDYKQSLQF+DLDREKKKI +
Sbjct: 176 VCAVVSIGVGVATEGFPKGMYDGTGILLSIILVVMVTAISDYKQSLQFRDLDREKKKIII 235
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
QV R+G R+++SI+DL+ GD+VHL +GDQVPADG+F+SG+++ I+ESSL+GESEP +VN
Sbjct: 236 QVTRDGSRQEVSIHDLVVGDVVHLSIGDQVPADGIFISGYNLEIDESSLSGESEPSHVNK 295
Query: 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360
PFLLSGTKVQNGS KMLVTTVGMRT+WGKLM TLSEGG+DETPLQVKLNGVATIIGKI
Sbjct: 296 EKPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLMDTLSEGGEDETPLQVKLNGVATIIGKI 355
Query: 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFXXXXXXXXXXXPEGLPLAV 420
GL FAV+TF V+ K G+ WS +DAL +L++F PEGLPLAV
Sbjct: 356 GLGFAVLTFVVLCIRFVVEKATAGSITEWSSEDALTLLDYFAIAVTIIVVAVPEGLPLAV 415
Query: 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480
TLSLAFAMK++M+D+ALVRHLAACETMGS+T IC+DKTGTLTTNHM V K ICE IKE
Sbjct: 416 TLSLAFAMKQLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVWICENIKER 475
Query: 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540
F ++ +L+Q+IF NTG EVV + KT+ILG+PTE AILEFGLLLG
Sbjct: 476 QEEN----FQLNLSEQVKNILIQAIFQNTGSEVVKDKEGKTQILGSPTERAILEFGLLLG 531
Query: 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 600
GD +R+ KI+K+EPFNS KK+M V+ G R CKGASEI+L C+K ++SNGE
Sbjct: 532 GDVDTQRREHKILKIEPFNSDKKKMSVLTSHSGGKVRAFCKGASEIVLKMCEKVVDSNGE 591
Query: 601 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660
VPL+E + +++ IE FASEALRTLCL ++ D +P GYT + +VGIKDP
Sbjct: 592 SVPLSEEKIASISDVIEGFASEALRTLCLVYTDLDEAPRGD--LPNGGYTLVAVVGIKDP 649
Query: 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720
+RPGV+E+V C++AGITVRMVTGDNI+TAKAIA+ECGILT G+AIEG +FR E+
Sbjct: 650 VRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGILTAGGVAIEGSDFRNLPPHEM 709
Query: 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780
++PKIQVMARS P+DKHTLV +LR +GEVVAVTGDGTNDAPALHEADIGLAMGIAGT
Sbjct: 710 RAILPKIQVMARSLPLDKHTLVNNLRK-MGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 768
Query: 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
EVAKE+ADVII+DDNF+TIV VAKWGR+VYINIQKFVQFQLTVNVVALI+NF SAC+TG
Sbjct: 769 EVAKENADVIIMDDNFATIVNVAKWGRAVYINIQKFVQFQLTVNVVALIINFVSACITG 827
|
|
| TAIR|locus:2175579 ACA8 ""autoinhibited Ca2+ -ATPase, isoform 8"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1825 (647.5 bits), Expect = 3.0e-188, P = 3.0e-188
Identities = 402/850 (47%), Positives = 545/850 (64%)
Query: 12 VKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQEKFRVAVLVSQA 71
+ +KN S E LQ+WRK V N RRFR+T +L K E +R +K R A
Sbjct: 34 IPSKNASIERLQQWRK-AALVLNASRRFRYTLDLKKEQETREMR----QKIRSHAHALLA 88
Query: 72 ALQFIH-GLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGVEGIAEKLST 130
A +F+ G E T A F I P++L + + H+ L+ +GG +G+A L T
Sbjct: 89 ANRFMDMGRESGVEKTTGPATPAGDFGITPEQLVIMSKDHNSGALEQYGGTQGLANLLKT 148
Query: 131 SITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVG 190
+ GIS + L +RK IYG N + +GF ++W+A HD+TL+IL V A+ SL +G
Sbjct: 149 NPEKGISGDDDDLLKRKTIYGSNTYPRKKGKGFLRFLWDACHDLTLIILMVAAVASLALG 208
Query: 191 IATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRK 250
I TEG +G +DG I +++LV+ VTA SDYKQSLQF++L+ EK+ I ++V R G R +
Sbjct: 209 IKTEGIKEGWYDGGSIAFAVILVIVVTAVSDYKQSLQFQNLNDEKRNIHLEVLRGGRRVE 268
Query: 251 ISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA-LNPFLLSGT 309
ISIYD++ GD++ L +G+QVPADG+ +SG S+ ++ESS+TGES+ VN +A +PFL+SG
Sbjct: 269 ISIYDIVVGDVIPLNIGNQVPADGVLISGHSLALDESSMTGESKIVNKDANKDPFLMSGC 328
Query: 310 KVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTF 369
KV +G+ MLVT VG+ T+WG LMA++SE +ETPLQV+LNGVAT IG IGL A
Sbjct: 329 KVADGNGSMLVTGVGVNTEWGLLMASISEDNGEETPLQVRLNGVATFIGSIGLAVAAAVL 388
Query: 370 AVMVQGLFTRKLQE---GTHW----TWSGDDALEILEFFXXXXXXXXXXXPEGLPLAVTL 422
+++ FT ++ G + T G ++++ PEGLPLAVTL
Sbjct: 389 VILLTRYFTGHTKDNNGGPQFVKGKTKVGHVIDDVVKVLTVAVTIVVVAVPEGLPLAVTL 448
Query: 423 SLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDN 482
+LA++M+KMM DKALVR L+ACETMGSAT+ICSDKTGTLT N MTV+++ K+ D
Sbjct: 449 TLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVESYAGG--KKTDT 506
Query: 483 SKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN-KTEILGTPTETAILEFGLLLGG 541
+ +PA+ + L+++ I NT G + + EG E G+PTE AIL +G+ LG
Sbjct: 507 EQ--------LPATITSLVVEGISQNTTGSIFVPEGGGDLEYSGSPTEKAILGWGVKLGM 558
Query: 542 DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEV 601
+F+ R S I+ PFNS KK+ GV ++ +G VH KGASEI+LA+C +++ +G V
Sbjct: 559 NFETARSQSSILHAFPFNSEKKRGGVAVKTADGEVHVHWKGASEIVLASCRSYIDEDGNV 618
Query: 602 VPLNEAAVNHLNETIEKFASEALRTLCLAC-------MEIGNEFSADAPIPTEGYTCIGI 654
P+ + + I A LR + LA + G E S +P + + I
Sbjct: 619 APMTDDKASFFKNGINDMAGRTLRCVALAFRTYEAEKVPTGEELSKWV-LPEDDLILLAI 677
Query: 655 VGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG-----IAIEG 709
VGIKDP RPGVK+SV +C++AG+ VRMVTGDN+ TA+AIA ECGIL+ + IEG
Sbjct: 678 VGIKDPCRPGVKDSVVLCQNAGVKVRMVTGDNVQTARAIALECGILSSDADLSEPTLIEG 737
Query: 710 PEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEA 769
FRE +D E K+ KI VM RSSP DK LV+ LR G VVAVTGDGTNDAPALHEA
Sbjct: 738 KSFREMTDAERDKISDKISVMGRSSPNDKLLLVQSLRRQ-GHVVAVTGDGTNDAPALHEA 796
Query: 770 DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALI 829
DIGLAMGIAGTEVAKES+D+IILDDNF+++V V +WGRSVY NIQKF+QFQLTVNV AL+
Sbjct: 797 DIGLAMGIAGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALV 856
Query: 830 VNFSSACLTG 839
+N +A +G
Sbjct: 857 INVVAAISSG 866
|
|
| TAIR|locus:2123924 ACA10 "autoinhibited Ca(2+)-ATPase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1809 (641.9 bits), Expect = 1.5e-186, P = 1.5e-186
Identities = 397/860 (46%), Positives = 551/860 (64%)
Query: 4 YLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEA-EAIR--RSNQE 60
Y + F KN E L+RWR+ V N RRFR+T +L + + + +R R++ +
Sbjct: 26 YEDSPFDIASTKNAPVERLRRWRQ-AALVLNASRRFRYTLDLKREEDKKQMLRKMRAHAQ 84
Query: 61 KFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGG 120
R A L AA + + G+ +S P F I +++ SI +I L+ GG
Sbjct: 85 AIRAAHLFKAAASR-VTGI--ASPLPTP---GGGDFGIGQEQIVSISRDQNIGALQELGG 138
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V G+++ L T++ GI + + +RK +G N + + R FW +VWEA D+TL+IL
Sbjct: 139 VRGLSDLLKTNLEKGIHGDDDDILKRKSAFGSNTYPQKKGRSFWRFVWEASQDLTLIILI 198
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240
V A+ SL +GI TEG KG +DG+ I ++LLV+ VTATSDY+QSLQF++L+ EK+ I +
Sbjct: 199 VAAVASLALGIKTEGIEKGWYDGISIAFAVLLVIVVTATSDYRQSLQFQNLNEEKRNIRL 258
Query: 241 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300
+V R+G R +ISIYD++ GD++ L +GDQVPADG+ V+G S+ ++ESS+TGES+ V N+
Sbjct: 259 EVTRDGRRVEISIYDIVVGDVIPLNIGDQVPADGVLVAGHSLAVDESSMTGESKIVQKNS 318
Query: 301 L-NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 359
+PFL+SG KV +G+ MLVT VG+ T+WG LMA++SE ETPLQV+LNGVAT IG
Sbjct: 319 TKHPFLMSGCKVADGNGTMLVTGVGVNTEWGLLMASVSEDNGGETPLQVRLNGVATFIGI 378
Query: 360 IGLFFAVVTFAVMVQGLFT--RKLQEGTHWTWSGDDALE-----ILEFFXXXXXXXXXXX 412
+GL A V V+V FT K ++G G E ++E F
Sbjct: 379 VGLTVAGVVLFVLVVRYFTGHTKNEQGGPQFIGGKTKFEHVLDDLVEIFTVAVTIVVVAV 438
Query: 413 PEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKAC 472
PEGLPLAVTL+LA++M+KMM DKALVR L+ACETMGSAT+ICSDKTGTLT N MTV++ C
Sbjct: 439 PEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVE-C 497
Query: 473 ICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAI 532
++++D+ P S +P++ + +L++ I +NT G V E + ++ G+PTE AI
Sbjct: 498 YAG-LQKMDS----PDSSSKLPSAFTSILVEGIAHNTTGSVFRSESGEIQVSGSPTERAI 552
Query: 533 LEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACD 592
L + + LG DF A + S V+ PFNS KK+ GV ++ P+ +H KGA+EI+L +C
Sbjct: 553 LNWAIKLGMDFDALKSESSAVQFFPFNSEKKRGGVAVKSPDSSVHIHWKGAAEIVLGSCT 612
Query: 593 KFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEI-GNEFSADAP------IP 645
+++ + V ++E + L + I+ A+ +LR + +A ++ D +P
Sbjct: 613 HYMDESESFVDMSEDKMGGLKDAIDDMAARSLRCVAIAFRTFEADKIPTDEEQLSRWELP 672
Query: 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI 705
+ + IVGIKDP RPGVK SV +C+ AG+ VRMVTGDNI TAKAIA ECGIL +
Sbjct: 673 EDDLILLAIVGIKDPCRPGVKNSVLLCQQAGVKVRMVTGDNIQTAKAIALECGILASDSD 732
Query: 706 A-----IEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGT 760
A IEG FR S+EE ++ +I VM RSSP DK LV+ L+ G VVAVTGDGT
Sbjct: 733 ASEPNLIEGKVFRSYSEEERDRICEEISVMGRSSPNDKLLLVQSLKRR-GHVVAVTGDGT 791
Query: 761 NDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQ 820
NDAPALHEADIGLAMGI GTEVAKE +D+IILDDNF ++V V +WGRSVY NIQKF+QFQ
Sbjct: 792 NDAPALHEADIGLAMGIQGTEVAKEKSDIIILDDNFESVVKVVRWGRSVYANIQKFIQFQ 851
Query: 821 LTVNVVALIVNFSSACLTGK 840
LTVNV AL++N +A G+
Sbjct: 852 LTVNVAALVINVVAAISAGE 871
|
|
| TAIR|locus:2094726 ACA9 "autoinhibited Ca(2+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1750 (621.1 bits), Expect = 2.7e-180, P = 2.7e-180
Identities = 396/856 (46%), Positives = 545/856 (63%)
Query: 6 NENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQEKFRVA 65
++ F KN S E+L+RWR+ V N RRFR+T +L+K + RR R
Sbjct: 42 DDPFDIDNTKNASVESLRRWRQ-AALVLNASRRFRYTLDLNKEEHYDNRRRM----IRAH 96
Query: 66 VLVSQAALQFIHGLNLSSEYTVPEEVAASG-FQICPDELGSIVEGHDIKKLKVHGGVEGI 124
V +AAL F + A++G F I ++L S+ ++ L+ +GGV+G+
Sbjct: 97 AQVIRAALLFKLAGEQQIAFGSSTPAASTGNFDIDLEKLVSMTRNQNMSNLQQYGGVKGV 156
Query: 125 AEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCAL 184
AEKL +++ GI+ E + RK +G N + + + F++++WEA D+TL+IL + A+
Sbjct: 157 AEKLKSNMEQGINEDEKEVIDRKNAFGSNTYPKKKGKNFFMFLWEAWQDLTLIILIIAAV 216
Query: 185 VSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVAR 244
SL +GI TEG +G DG I ++LLV+ VTA SDY+QSLQF++L+ EK+ I ++V R
Sbjct: 217 TSLALGIKTEGLKEGWLDGGSIAFAVLLVIVVTAVSDYRQSLQFQNLNDEKRNIQLEVMR 276
Query: 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPF 304
G KISIYD++ GD++ L +GDQVPADG+ +SG S+ I+ESS+TGES+ V+ + +PF
Sbjct: 277 GGRTVKISIYDVVVGDVIPLRIGDQVPADGVLISGHSLAIDESSMTGESKIVHKDQKSPF 336
Query: 305 LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFF 364
L+SG KV +G MLVT VG+ T+WG LMA++SE +ETPLQV+LNG+AT IG +GL
Sbjct: 337 LMSGCKVADGVGNMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGLATFIGIVGLSV 396
Query: 365 AVVTFAVMVQGLFTRKLQE---GTHW---TWSGDDALE-ILEFFXXXXXXXXXXXPEGLP 417
A+V ++ FT Q+ T + T S D ++ ++ F PEGLP
Sbjct: 397 ALVVLVALLVRYFTGTTQDTNGATQFIKGTTSISDIVDDCVKIFTIAVTIVVVAVPEGLP 456
Query: 418 LAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEI 477
LAVTL+LA++M+KMM DKALVR L+ACETMGSAT+ICSDKTGTLT N MTV++
Sbjct: 457 LAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVETYAGGSK 516
Query: 478 KEV-DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIG-EGNKTEILGTPTETAILEF 535
+V DN G P + L+ + + NT G + +G + EI G+PTE AIL +
Sbjct: 517 MDVADNPSGLH------PKLVA-LISEGVAQNTTGNIFHPKDGGEVEISGSPTEKAILSW 569
Query: 536 GLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFL 595
LG F R S I+ PFNS KK+ GV + + +H KGA+EI+LA C +++
Sbjct: 570 AYKLGMKFDTIRSESAIIHAFPFNSEKKRGGVAVLRGDSEVFIHWKGAAEIVLACCTQYM 629
Query: 596 NSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLAC--MEIGN----EFSADA-PIPTEG 648
+SNG + + E+ I+ A +LR + +AC E+ + D +P +
Sbjct: 630 DSNGTLQSI-ESQKEFFRVAIDSMAKNSLRCVAIACRTQELNQVPKEQEDLDKWALPEDE 688
Query: 649 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA-- 706
+ IVGIKDP RPGV+E+V IC SAG+ VRMVTGDN+ TAKAIA ECGIL+ + A
Sbjct: 689 LILLAIVGIKDPCRPGVREAVRICTSAGVKVRMVTGDNLQTAKAIALECGILSSDTEAVE 748
Query: 707 ---IEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDA 763
IEG FRE S++E ++ KI VM RSSP DK LV+ LR G+VVAVTGDGTNDA
Sbjct: 749 PTIIEGKVFRELSEKEREQVAKKITVMGRSSPNDKLLLVQALRKN-GDVVAVTGDGTNDA 807
Query: 764 PALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTV 823
PALHEADIGL+MGI+GTEVAKES+D+IILDDNF+++V V +WGRSVY NIQKF+QFQLTV
Sbjct: 808 PALHEADIGLSMGISGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTV 867
Query: 824 NVVALIVNFSSACLTG 839
NV ALI+N +A +G
Sbjct: 868 NVAALIINVVAAMSSG 883
|
|
| TAIR|locus:2087363 AT3G63380 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1596 (566.9 bits), Expect = 5.5e-164, P = 5.5e-164
Identities = 351/826 (42%), Positives = 519/826 (62%)
Query: 35 RKRRFRFTANLSKRFEAEAIR-----RSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPE 89
R+ RF + A S R ++ R + + ++ +S AL+ G ++S +P
Sbjct: 26 RRWRFAYAAIYSMRAMLSLVKEIVPARIDPKTSDASLSLSYTALESGEGAKINS---MPL 82
Query: 90 EVAASGFQICPDELGSIVEGHDIKKLKVHGGVEGIAEKLSTSITDGISTSEHLLNRRKEI 149
+ I ++L I++G D+ ++ GGVEG+A L T+ T GI +E ++RR+++
Sbjct: 83 SYVPA---IDQEQLVEIMKGKDLPGIQALGGVEGVAASLRTNPTKGIHGNEQEVSRRRDL 139
Query: 150 YGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMS 209
+G N + + P +G +V+EA D+T++IL VCA+ SL GI G +G ++G I ++
Sbjct: 140 FGSNTYHKPPPKGLLFFVYEAFKDLTILILLVCAIFSLGFGIKEHGIKEGWYEGGSIFVA 199
Query: 210 ILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQ 269
+ LV+ V+A S+++Q QF L + I V+V R+ R+ ISI+D++ GD+V L +GDQ
Sbjct: 200 VFLVIVVSALSNFRQERQFDKLSKISNNIKVEVLRDSRRQHISIFDVVVGDVVFLKIGDQ 259
Query: 270 VPADGLFVSGFSVLINESSLTGESEPVNVNAL-NPFLLSGTKVQNGSCKMLVTTVGMRTQ 328
+PADGLF+ G S+ ++ESS+TGES+ + V+ NPFL SGTK+ +G +MLV +VGM T
Sbjct: 260 IPADGLFLEGHSLQVDESSMTGESDHLEVDHKDNPFLFSGTKIVDGFAQMLVVSVGMSTT 319
Query: 329 WGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWT 388
WG+ M+++++ + TPLQV+L+ + + IGKIGL A + V++ FT ++
Sbjct: 320 WGQTMSSINQDSSERTPLQVRLDTLTSTIGKIGLTVAALVLVVLLVRYFTGNTEKEGKRE 379
Query: 389 WSGD----DAL--EILEFFXXXXXXXXXXXPEGLPLAVTLSLAFAMKKMMNDKALVRHLA 442
++G D + ++ PEGLPLAVTL+LA++MK+MM+D+A+VR L+
Sbjct: 380 YNGSKTPVDTVVNSVVRIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMSDQAMVRKLS 439
Query: 443 ACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLL 502
ACETMGSAT IC+DKTGTLT N M V K + +E D++K I LL
Sbjct: 440 ACETMGSATVICTDKTGTLTLNEMKVTKFWLGQESIHEDSTK-------MISPDVLDLLY 492
Query: 503 QSIFNNTGGEVVIGEGNKT-EILGTPTETAILEFGLL-LGGDFQAERQASKIVKVEPFNS 560
Q NT G V + + T E G+PTE A+L + +L LG D ++ +Q ++++VE F+S
Sbjct: 493 QGTGLNTTGSVCVSDSGSTPEFSGSPTEKALLSWTVLNLGMDMESVKQKHEVLRVETFSS 552
Query: 561 VKKQMGVVIELP-EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKF 619
KK+ GV++ + VH KGA+E++LA C + S G V ++ A + + I+
Sbjct: 553 AKKRSGVLVRRKSDNTVHVHWKGAAEMVLAMCSHYYTSTGSVDLMDSTAKSRIQAIIQGM 612
Query: 620 ASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITV 679
A+ +LR + A N D+ + +G T +GIVG+KDP RPGV ++V C+ AG+T+
Sbjct: 613 AASSLRCIAFAHKIASN----DSVLEEDGLTLMGIVGLKDPCRPGVSKAVETCKLAGVTI 668
Query: 680 RMVTGDNINTAKAIARECGILTDNG-----IAIEGPEFREKSDEELSKLIPKIQVMARSS 734
+M+TGDN+ TAKAIA ECGIL N +EG +FR +DEE + + KI+VMARSS
Sbjct: 669 KMITGDNVFTAKAIAFECGILDHNDKDEEDAVVEGVQFRNYTDEERMQKVDKIRVMARSS 728
Query: 735 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDD 794
P DK +VK LR G VVAVTGDGTNDAPAL EADIGL+MGI GTEVAKES+D++ILDD
Sbjct: 729 PSDKLLMVKCLRLK-GHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDD 787
Query: 795 NFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGK 840
NF+++ TV KWGR VY NIQKF+QFQLTVNV AL++NF +A G+
Sbjct: 788 NFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALVINFIAAISAGE 833
|
|
| DICTYBASE|DDB_G0289473 DDB_G0289473 "Ca2+-ATPase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 801 (287.0 bits), Expect = 6.8e-160, Sum P(2) = 6.8e-160
Identities = 179/465 (38%), Positives = 271/465 (58%)
Query: 96 FQICPDELGSIVEGHDIKKLKV-HGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINK 154
+ I +EL V+ D + +K +GGV G++++L ++ +G+S E R +GINK
Sbjct: 17 YSITNEELSGYVQEEDYEAIKQRYGGVSGLSKRLGSNEENGLSQQEATNEERIHRFGINK 76
Query: 155 FTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVV 214
E + + ++W+A+HD TL+IL V A+VS+++G+ E G DG I++++++VV
Sbjct: 77 MNEIAQKSLFFFIWQAIHDKTLIILIVSAVVSIILGLTVEDRKTGWIDGTAILVAVIIVV 136
Query: 215 FVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADG 274
VTA +DY + +F+ L+ + + V V R G IS+YD++ GD+V L GD +PADG
Sbjct: 137 LVTAGNDYNKEKKFRKLNTIRNERNVSVVRGGHLASISVYDVVVGDVVKLETGDTIPADG 196
Query: 275 LFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMA 334
L+++G S+ ++ESS+TGES+ + PF LSG +V GS MLV VG +QWGKL
Sbjct: 197 LYIAGQSIAVDESSMTGESDQKRKSNDRPFFLSGCQVLEGSASMLVIAVGPNSQWGKLKL 256
Query: 335 TLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDA 394
L + D +TPL KL +A IGK GL A++TF V++ +++G W WS +
Sbjct: 257 LL-QSPDSDTPLTQKLEKLAETIGKFGLIAAILTFGVLLLKYVIVFVKDGHTWHWS--EL 313
Query: 395 LEILEFFXXXXXXXXXXXPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSIC 454
I+ F PEGLPLAVT+SLA++M KMM D+ LVRHL ACETMG AT+IC
Sbjct: 314 GTIVGFVVTAITIIVVAVPEGLPLAVTISLAYSMMKMMKDQNLVRHLEACETMGGATNIC 373
Query: 455 SDKTGTLTTNHMTVLKACICEEIKE---VDNSKGTPAFGS----SIPASASKLLLQSIFN 507
SDKTGTLT N MTV+K I + I V+N K + + S P+S+S +++N
Sbjct: 374 SDKTGTLTQNRMTVVKKIIGKSINSDDFVENGKSSMSDQQRDIYSSPSSSSSR--HNVYN 431
Query: 508 NTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKI 552
++G V + E+L +L G+ L E+ ++
Sbjct: 432 DSGK--VNQHDCEMEMLSNSRILTLLAEGISLNSTAYIEKHTDRL 474
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q2QMX9 | ACA1_ORYSJ | 3, ., 6, ., 3, ., 8 | 0.7926 | 0.9988 | 0.8225 | yes | no |
| O81108 | ACA2_ARATH | 3, ., 6, ., 3, ., 8 | 0.8023 | 0.9940 | 0.8234 | no | no |
| Q37145 | ACA1_ARATH | 3, ., 6, ., 3, ., 8 | 0.8235 | 0.9988 | 0.8225 | yes | no |
| O64806 | ACA7_ARATH | 3, ., 6, ., 3, ., 8 | 0.7919 | 0.9940 | 0.8226 | no | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 840 | |||
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 0.0 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 1e-123 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-118 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 1e-115 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 9e-97 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 1e-68 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 3e-67 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 1e-62 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 7e-55 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 1e-54 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 9e-45 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 3e-40 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 1e-30 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 3e-30 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 2e-27 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 4e-27 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 5e-27 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 7e-26 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 2e-25 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 1e-23 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 2e-23 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 5e-22 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 8e-22 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 5e-21 | |
| pfam12515 | 47 | pfam12515, CaATP_NAI, Ca2+-ATPase N terminal autoi | 2e-20 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 3e-20 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 6e-17 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 5e-16 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 4e-15 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 4e-14 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 3e-12 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 1e-11 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 2e-09 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 3e-08 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 8e-08 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 3e-07 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 6e-07 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 5e-05 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 5e-05 | |
| TIGR00099 | 256 | TIGR00099, Cof-subfamily, Cof subfamily of IIB sub | 7e-05 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 9e-05 | |
| COG0560 | 212 | COG0560, SerB, Phosphoserine phosphatase [Amino ac | 2e-04 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 3e-04 | |
| COG0561 | 264 | COG0561, Cof, Predicted hydrolases of the HAD supe | 6e-04 | |
| COG4069 | 367 | COG4069, COG4069, Uncharacterized protein conserve | 0.004 | |
| pfam12710 | 122 | pfam12710, HAD, haloacid dehalogenase-like hydrola | 0.004 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 917 bits (2372), Expect = 0.0
Identities = 381/752 (50%), Positives = 512/752 (68%), Gaps = 22/752 (2%)
Query: 101 DELGSIVEG--HDIKKLKVH-----GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGIN 153
++G + DI K + GG EGIA KL T + +G+ S L RR+++YG N
Sbjct: 18 FDVGVSILTDLTDIFKRAMPLYEKLGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKN 77
Query: 154 KFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGI-----ATEGWPKGAHDGLGIVM 208
+ E P + F VW AL D TL++L+V A+VSLV+G+ G +G+ I++
Sbjct: 78 ELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILV 137
Query: 209 SILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGD 268
S++LVV VTA +DYK+ LQF+ L+REK + V R G ++ISI+D++ GDIV L GD
Sbjct: 138 SVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGD 197
Query: 269 QVPADGLFVSGFSVLINESSLTGESEPVNVNAL-NPFLLSGTKVQNGSCKMLVTTVGMRT 327
VPADG+F+SG S+ I+ESS+TGES+P+ + +PFLLSGT V GS +MLVT VG+ +
Sbjct: 198 VVPADGVFISGLSLEIDESSITGESDPIKKGPVQDPFLLSGTVVNEGSGRMLVTAVGVNS 257
Query: 328 QWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHW 387
GKLM L + G+D TPLQ KL+ +A +IGK G+ AV+ F V+ R ++
Sbjct: 258 FGGKLMMELRQAGEDSTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRD 317
Query: 388 TWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETM 447
T +DA L+ F IAVTIVVVAVPEGLPLAVT++LA++MKKMM D LVRHLAACETM
Sbjct: 318 T--EEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETM 375
Query: 448 GSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFN 507
GSAT+ICSDKTGTLT N M+V++ I E+ V + ++P +L++ I
Sbjct: 376 GSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRD------VLRNVPKHVRNILVEGISL 429
Query: 508 NTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGV 567
N+ E V+ G K +G+ TE A+L+FGLLL D+Q R K+VK+ PFNS +K M V
Sbjct: 430 NSSSEEVVDRGGKRAFIGSKTECALLDFGLLLLRDYQEVRAEEKVVKIYPFNSERKFMSV 489
Query: 568 VIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTL 627
V++ G +R KGASEI+L C K L+SNGE P+++ + + IE AS+ALRT+
Sbjct: 490 VVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRCADVIEPLASDALRTI 549
Query: 628 CLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNI 687
CLA + E P +G T IG+VGIKDP+RPGV+E+V C+ AGITVRMVTGDNI
Sbjct: 550 CLAYRDFAPEEFPRKDYPNKGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNI 609
Query: 688 NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747
+TAKAIAR CGILT G+A+EG EFR EE+ ++PK++V+ARSSP+DK LV L+
Sbjct: 610 DTAKAIARNCGILTFGGLAMEGKEFRSLVYEEMDPILPKLRVLARSSPLDKQLLVLMLK- 668
Query: 748 TLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGR 807
+GEVVAVTGDGTNDAPAL AD+G +MGI+GTEVAKE++D+I+LDDNF++IV KWGR
Sbjct: 669 DMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGR 728
Query: 808 SVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839
+VY NI+KF+QFQLTVNVVA+I+ F +C++
Sbjct: 729 NVYDNIRKFLQFQLTVNVVAVILTFVGSCISS 760
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 543 bits (1401), Expect = 0.0
Identities = 264/725 (36%), Positives = 382/725 (52%), Gaps = 57/725 (7%)
Query: 124 IAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCA 183
+ +L TS T G+S E + RR + YG N+ E R D +++L V A
Sbjct: 33 LLLELFTSPTTGLSEEE--VKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAA 90
Query: 184 LVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVA 243
L+S VG W D + I++ +++ + +Y+ + L ++ +V
Sbjct: 91 LLSAFVGD----WVDAGVDAIVILLVVVINALLGFVQEYRAEKALEAL-KKMSSPKAKVL 145
Query: 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL-- 301
R+G +I +L+PGDIV L GD VPAD + + ++ES+LTGES PV AL
Sbjct: 146 RDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGESLPVEKQALPL 205
Query: 302 -----------NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKL 350
+ L SGT V +G K +V G T++GK+ L + +TPLQ KL
Sbjct: 206 TKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKL 265
Query: 351 NGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVV 410
N + + + L + F V GLF G+ LE A+ + V
Sbjct: 266 NKLGKFLLVLALVLGALVFVV---GLFRG-----------GNGLLESFLT---ALALAVA 308
Query: 411 AVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLK 470
AVPEGLP VT++LA ++M D A+VR L A ET+GS ICSDKTGTLT N MTV K
Sbjct: 309 AVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKK 368
Query: 471 ACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTET 530
I K++D+ + + LL + N+ V E N G PTE
Sbjct: 369 IYINGGGKDIDDKDLKD------SPALLRFLLAAALCNS----VTPEKNGWYQAGDPTEG 418
Query: 531 AILEFGLLLGG--DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIIL 588
A++EF LG D I+ PF+S +K+M V+++ EG + + KGA E+IL
Sbjct: 419 ALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVIL 478
Query: 589 AACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIG-NEFSADAPIPTE 647
C S GE+ PL E + L E +++ ASE LR L +A ++ E +
Sbjct: 479 ERCK----SIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIES 534
Query: 648 GYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGI 705
+G+ GI+DP R VKE++ R AGI V M+TGD++ TA AIA+ECGI + + +
Sbjct: 535 DLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESAL 594
Query: 706 AIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPA 765
I+G E SDEEL++L+ ++ V AR SP K +V+ L+ G VVA+TGDG NDAPA
Sbjct: 595 VIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQK-SGHVVAMTGDGVNDAPA 653
Query: 766 LHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNV 825
L AD+G+AMG GT+ AKE+AD+++LDDNF+TIV GR VY+NI+KF+ + L+ NV
Sbjct: 654 LKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNV 713
Query: 826 VALIV 830
++
Sbjct: 714 GEVLT 718
|
Length = 917 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 392 bits (1008), Expect = e-123
Identities = 236/746 (31%), Positives = 380/746 (50%), Gaps = 82/746 (10%)
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWV-YVWEALHDMTLMIL 179
VE KL T + +G+++S+ +RR +G N+F W ++ + + + +++L
Sbjct: 9 VEETCSKLQTDLQNGLNSSQEASHRRA-FHGWNEFDVEEDESLWKKFLSQFVKNPLILLL 67
Query: 180 AVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKIT 239
A++S+ +G D + I ++IL+VV V +Y+ + L++
Sbjct: 68 IASAVISVFMG--------NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPP-E 118
Query: 240 VQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVN-- 297
+ R G + L+PGD+V L +GD+VPAD V + I+ES+LTGE+ PV+
Sbjct: 119 CHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTPVSKV 178
Query: 298 ---VNALNPFLLS--------GTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPL 346
+ A L+ GT V+ G K +V G T++G + + +TPL
Sbjct: 179 TAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPL 238
Query: 347 QVKLNGVATIIGKIGLFFAVVTFAV----MVQGLFTRKLQEGTHWTWSGDDALEILEFFA 402
Q ++ +G ++V+F V + G F +G W LE F
Sbjct: 239 QKSMD-------LLGKQLSLVSFGVIGVICLVGWF-----QGKDW----------LEMFT 276
Query: 403 IAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLT 462
I+V++ V A+PEGLP+ VT++LA + +M +A+VR L + ET+GS ICSDKTGTLT
Sbjct: 277 ISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLT 336
Query: 463 TNHMTVLKACICEEIKEVDNSKGTPAFGSSI-----------PASASKLLLQSIFNNTGG 511
NHMTV K + + + N+ FG I A + L ++ NN
Sbjct: 337 KNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNA-- 394
Query: 512 EVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIEL 571
+LG PT+ A++E + G R+ V PF+S +K M V
Sbjct: 395 ---KFRNEADTLLGNPTDVALIELLMKFG--LDDLRETYIRVAEVPFSSERKWMAVKCVH 449
Query: 572 PEGGFR-VHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLA 630
+ KGA E +L C + +G+ + L + + + E + AS LR + A
Sbjct: 450 RQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFA 509
Query: 631 CMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTA 690
+ T +G+VGI DP RPGVKE+V + G+ + M+TGD+ TA
Sbjct: 510 SGPEKGQL-----------TFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETA 558
Query: 691 KAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLG 750
+IAR G+ + ++ G + D++LS+++PK+ V AR+SP K +VK L+ G
Sbjct: 559 VSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQK-RG 617
Query: 751 EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVY 810
+VVA+TGDG NDAPAL ADIG+AMG GT+VAKE+AD+I+ DD+F+TI++ + G+ ++
Sbjct: 618 DVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIF 677
Query: 811 INIQKFVQFQLTVNVVAL-IVNFSSA 835
NI+ F+ FQL+ +V AL ++ ++
Sbjct: 678 NNIKNFITFQLSTSVAALSLIALATL 703
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 369 bits (950), Expect = e-118
Identities = 194/635 (30%), Positives = 294/635 (46%), Gaps = 126/635 (19%)
Query: 206 IVMSILLVVFVT-ATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHL 264
+++ +LLVV D +SL DR V RNG ++I DL+PGD+V +
Sbjct: 6 VLVFVLLVVKQKLKAEDILRSLS----DRLVNTRPATVLRNG-WKEIPAKDLVPGDVVLV 60
Query: 265 CMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPF---------LLSGTKVQNGS 315
G+ VPADG+ +SG S ++ES+LTGES PV AL + +GT V G+
Sbjct: 61 KSGETVPADGVLLSG-SCFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTYVFGGT 119
Query: 316 CKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQG 375
++VT G+ T G++ + G + TPLQ K + + I + L + + +
Sbjct: 120 LIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENFIFILFLLLLALAVFLYLFI 179
Query: 376 LFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDK 435
D I + A+ ++V+ VP LP AVT++LA ++
Sbjct: 180 RGW--------------DPNSIFKALLRALIVLVIVVPPALPAAVTVALAVGDARLAKKG 225
Query: 436 ALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPA 495
LVR+L A E +G +CSDKTGTLT N MT+ I + +
Sbjct: 226 ILVRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDG-----GKEDNSSSL------ 274
Query: 496 SASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKV 555
V + N + G P E A+L+ L+G + KI+ V
Sbjct: 275 ------------------VACDNN--YLSGDPMEKALLKSAELVGKAD-KGNKEYKILDV 313
Query: 556 EPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNET 615
PF+SV K+M V++E P+G + KGA E IL C N+ E
Sbjct: 314 FPFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERC------------------NNYEEK 355
Query: 616 IEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSA 675
+ A + LR L A + + +G++ +DP+RP KE++ ++A
Sbjct: 356 YLELARQGLRVLAFA----------SKELEDD-LEFLGLITFEDPLRPDAKETIEELKAA 404
Query: 676 GITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735
GI V M+TGDN+ TAKAIA+E GI V AR SP
Sbjct: 405 GIKVVMITGDNVLTAKAIAKELGID----------------------------VFARVSP 436
Query: 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795
K +V+ L+ G +VA+TGDG NDAPAL +AD+G+AMG AK +AD+++LDD+
Sbjct: 437 EQKLQIVEALQ-KKGHIVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLDDD 489
Query: 796 FSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIV 830
S IV K GR ++ NI+ + + + N++ + +
Sbjct: 490 LSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPL 524
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 371 bits (954), Expect = e-115
Identities = 237/744 (31%), Positives = 349/744 (46%), Gaps = 101/744 (13%)
Query: 167 VWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIV--MSILLVVFVTATSDYKQ 224
V E D+ + IL + A VS V+ EG V ILL++ A Q
Sbjct: 1 VLEQFEDLLVRILLLAACVSFVLAWFEEG----EETVTAFVEPFVILLILVANAIVGVWQ 56
Query: 225 SL-------QFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFV 277
K+ + E K V R+G I DL+PGDIV L +GD+VPAD +
Sbjct: 57 ERNAEKAIEALKEYESEHAK----VLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVL 112
Query: 278 SGFSVLINESSLTGESEPVNV--------NALNP----FLLSGTKVQNGSCKMLVTTVGM 325
S ++ +++S LTGES VN A+N L SGT V G + +V GM
Sbjct: 113 SLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGM 172
Query: 326 RTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGT 385
T+ GK+ + ++TPLQ KL+ ++ K+ ++ + + + L G
Sbjct: 173 STEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGW 232
Query: 386 HWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACE 445
+ +F IAV + V A+PEGLP +T LA +KM A+VR L + E
Sbjct: 233 --------IQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVE 284
Query: 446 TMGSATSICSDKTGTLTTNHMTVLKACICE----EIKE--VDNSKGTPAFGS----SIPA 495
T+G T ICSDKTGTLTTN M+V K + + E V + P G A
Sbjct: 285 TLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVA 344
Query: 496 SASKLLL-------------QSIFNNTGGEVVIGEGNKTEILGTPTETAIL-------EF 535
L FN G E +G TE A+
Sbjct: 345 GGQDAGLEELATIAALCNDSSLDFNERKGVY--------EKVGEATEAALKVLVEKMGLP 396
Query: 536 GLLLGGDFQAERQ----------ASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASE 585
G + K+ +E F+ +K M V+ + P G ++ KGA E
Sbjct: 397 ATKNGVSSKRRPALGCNSVWNDKFKKLATLE-FSRDRKSMSVLCK-PSTGNKLFVKGAPE 454
Query: 586 IILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFAS-EALRTLCLACMEIGNEFSADAPI 644
+L C LN +G VPL + N + I++ + +ALR L LA +I + D
Sbjct: 455 GVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLS 514
Query: 645 PTEGY-------TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC 697
+ T IG+VG+ DP RP V +++ CR+AGI V M+TGDN TA+AI R
Sbjct: 515 DPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRI 574
Query: 698 GILTDN----GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVV 753
GI + + + G EF E + + +R P K LV+ L+ GE+V
Sbjct: 575 GIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQ-EQGEIV 633
Query: 754 AVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINI 813
A+TGDG NDAPAL +ADIG+AMG +GTEVAKE++D+++ DDNF+TIV + GR++Y N+
Sbjct: 634 AMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNM 692
Query: 814 QKFVQFQLTVNVVALIVNFSSACL 837
++F+++ ++ N+ ++ F +A L
Sbjct: 693 KQFIRYMISSNIGEVVCIFLTAAL 716
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 324 bits (832), Expect = 9e-97
Identities = 242/769 (31%), Positives = 377/769 (49%), Gaps = 96/769 (12%)
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIY---GINKFTESPARGFWVYVWEALHDMTLM 177
++ + K T ++ G+S + R EI G N T P WV L M
Sbjct: 22 LDELERKYGTDLSKGLSAA-----RAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSM 76
Query: 178 ILAVCALVSLVV-GI--ATEGWPKGAHDGLGIVMSILLVVFVTAT-SDYKQSLQFKDLDR 233
+L + A++ + GI +TE P+ + LG+V+S VV +T S Y+++ K ++
Sbjct: 77 LLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLS--AVVIITGCFSYYQEAKSSKIMES 134
Query: 234 EKKKITVQ--VARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTG 291
K + Q V R+G + I+ ++ GD+V + GD++PAD +S ++ SSLTG
Sbjct: 135 FKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQGCKVDNSSLTG 194
Query: 292 ESEP-------VNVNAL---NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG-G 340
ESEP + N L N S V+ G+ + +V G RT G++ A+L+ G
Sbjct: 195 ESEPQTRSPEFTHENPLETRNIAFFSTNCVE-GTARGIVVNTGDRTVMGRI-ASLASGLE 252
Query: 341 DDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEF 400
+ +TP+ +++ II + +F V F + L G W LE + F
Sbjct: 253 NGKTPIAIEIEHFIHIITGVAVFLGVSFFIL--------SLILGYTW-------LEAVIF 297
Query: 401 FAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGT 460
+ I+V VPEGL VT+ L K+M LV++L A ET+GS ++ICSDKTGT
Sbjct: 298 L---IGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGT 354
Query: 461 LTTNHMTVLKACICEEIKEVDNSKGTP--AFGSSIPASASKLLLQSIFNNTGGEVVIGEG 518
LT N MTV +I E D ++ +F S + + + N G+
Sbjct: 355 LTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNR--AVFKAGQE 412
Query: 519 N----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEG 574
N K + G +E+A+L+ L G R+ + V PFNS K + E +
Sbjct: 413 NVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDP 472
Query: 575 GFRVHC---KGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLAC 631
H KGA E IL C L +G+ PL+E + R L
Sbjct: 473 RDPRHLLVMKGAPERILERCSSIL-IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCH 531
Query: 632 MEI-------GNEFSADA-PIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVT 683
+ + G +F D PT+ +G++ + DP R V ++V CRSAGI V MVT
Sbjct: 532 LYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVT 591
Query: 684 GDNINTAKAIARECGILTDNG-----IA-------------------IEGPEFREKSDEE 719
GD+ TAKAIA+ GI+++ IA + G + ++ + E+
Sbjct: 592 GDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQ 651
Query: 720 LSKLI---PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 776
L +++ +I V AR+SP K +V+ + G +VAVTGDG ND+PAL +ADIG+AMG
Sbjct: 652 LDEILKYHTEI-VFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMG 709
Query: 777 IAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNV 825
IAG++V+K++AD+I+LDDNF++IVT + GR ++ N++K + + LT N+
Sbjct: 710 IAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNI 758
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 244 bits (623), Expect = 1e-68
Identities = 200/746 (26%), Positives = 328/746 (43%), Gaps = 111/746 (14%)
Query: 118 HGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLM 177
G E + KL T G++ E + R +G N+ E + A ++ +
Sbjct: 17 QMGKETLLRKLGVHET-GLTNVE--VTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIY 73
Query: 178 ILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKK 237
ILA+ VS + D L + I L+V + + Q + + K
Sbjct: 74 ILAMLMGVSYLT------------DDLEATVIIALMVLASGLLGFIQESRAERAAYALKN 121
Query: 238 I---TVQVAR------NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESS 288
+ T V R NG ++ I L+PGD++ L GD +PAD +S + IN+S+
Sbjct: 122 MVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSA 181
Query: 289 LTGESEPV-------NVNALNPF-----LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATL 336
LTGES PV GT V +G + +V G T +G L
Sbjct: 182 LTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAA 241
Query: 337 SEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALE 396
+E T + V+ ++ + L V M+ GL W
Sbjct: 242 TERRGQ-TAFDKGVKSVSKLLIRFMLVMVPVVL--MINGL--------MKGDW------- 283
Query: 397 ILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSD 456
LE F A+ + V PE LP+ V+ +LA M K +V+ L+A + G+ +C+D
Sbjct: 284 -LEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTD 342
Query: 457 KTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNN---TGGEV 513
KTGTLT + + E K +D+S G + ++L + N+ TG +
Sbjct: 343 KTGTLTQDKI--------ELEKHIDSS-GETS---------ERVLKMAWLNSYFQTGWKN 384
Query: 514 VIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQ-ASKIVKVE--PFNSVKKQMGVVIE 570
V+ + A+L D A RQ AS+ KV+ PF+ ++++ VV+E
Sbjct: 385 VL-------------DHAVLAKL-----DESAARQTASRWKKVDEIPFDFDRRRLSVVVE 426
Query: 571 LPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLA 630
R+ CKGA E +L C G VV L+E+ + L + + + +R + +A
Sbjct: 427 NRAEVTRLICKGAVEEMLTVCTH-KRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVA 485
Query: 631 CMEI---GNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNI 687
+ +F+ E G +G DP + KE++A GI V+++TGDN
Sbjct: 486 TKTLKVGEADFTK---TDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNE 542
Query: 688 NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747
I +E GI D + G + E SDEEL++ + K + AR +PM K ++ L+
Sbjct: 543 IVTARICQEVGI--DANDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKK 600
Query: 748 TLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGR 807
G V GDG NDAPAL +AD+G+++ A ++AKE++D+I+L+ + + GR
Sbjct: 601 A-GHTVGFLGDGINDAPALRKADVGISVDTA-ADIAKEASDIILLEKSLMVLEEGVIEGR 658
Query: 808 SVYINIQKFVQFQLT---VNVVALIV 830
+ + NI K+++ + NV +++V
Sbjct: 659 NTFGNILKYLKMTASSNFGNVFSVLV 684
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 237 bits (607), Expect = 3e-67
Identities = 191/723 (26%), Positives = 320/723 (44%), Gaps = 125/723 (17%)
Query: 135 GISTSEHLLNRRKEIYGINKFTE---SPARGFWVYVWEALHDMTLMILAVCALVSLVVGI 191
G++++E +R YG N+ E SP F + W L + + A+++ I
Sbjct: 1 GLTSAE--AKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWV----MEAAAIIA----I 50
Query: 192 ATEGWPKGAHDGLGIVMSILL---VVFV------TATSDYKQSLQFKDLDREKKKITVQV 242
A E W D + I+ +LL + F+ A KQSL K +V
Sbjct: 51 ALENWV----DFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPK----------ARV 96
Query: 243 ARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA-L 301
R+G ++I +L+PGD+V L +GD VPAD G + +++++LTGES PV
Sbjct: 97 LRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTGD 156
Query: 302 NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIG 361
+ SG+ V+ G + +VT GM T +GK A + LQ I+ KIG
Sbjct: 157 IAY--SGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQK-------ILSKIG 207
Query: 362 LF---FAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPL 418
LF V + + LF + G+ E L+F A+ ++V +P +P
Sbjct: 208 LFLIVLIGVLVLIELVVLFFGR----------GESFREGLQF---ALVLLVGGIPIAMPA 254
Query: 419 AVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIK 478
+++++A ++ KA+V L A E + +CSDKTGTLT N +++ +
Sbjct: 255 VLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGF 314
Query: 479 EVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLL 538
+ D+ A S E +TA+L G
Sbjct: 315 DKDDVLLYAALASRE-----------------------EDQD------AIDTAVL--GSA 343
Query: 539 LGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHC-KGASEIILAACDKFLNS 597
D + R K+++ PF+ V K+ +E PE G R KGA ++IL CD
Sbjct: 344 K--DLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCD----- 396
Query: 598 NGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGI 657
+ E + E +++ AS R L +A D + +G++ +
Sbjct: 397 --NKKEIEEK----VEEKVDELASRGYRALGVA--------RTDEE---GRWHFLGLLPL 439
Query: 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFREK 715
DP R KE++ R G+ V+MVTGD++ AK AR G+ T+ + + R+
Sbjct: 440 FDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDD 499
Query: 716 SDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM 775
L +++ A P K+ +V+ L+ G +V +TGDG NDAPAL +AD+G+A
Sbjct: 500 LPSGLGEMVEDADGFAEVFPEHKYEIVEILQ-KRGHLVGMTGDGVNDAPALKKADVGIA- 557
Query: 776 GIAG-TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSS 834
+AG T+ A+ +AD+++ + S IV R ++ ++ +V +++ + ++ F
Sbjct: 558 -VAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAET-IRIVFFFGL 615
Query: 835 ACL 837
L
Sbjct: 616 LIL 618
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 227 bits (580), Expect = 1e-62
Identities = 188/713 (26%), Positives = 319/713 (44%), Gaps = 100/713 (14%)
Query: 133 TDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIA 192
+G++ +E + +E +G N+ +WV++W + ++L + +S A
Sbjct: 65 PEGLNEAE--VESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISY----A 118
Query: 193 TEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKI--TVQVARNG---- 246
TE L + +S LL A S K D K + T V R
Sbjct: 119 TEDLFAAGVIALMVAISTLLNFIQEARST-------KAADALKAMVSNTATVLRVINDKG 171
Query: 247 --FRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPV-------N 297
+I I L+PGDI+ L GD +PAD + + + ++SLTGES PV
Sbjct: 172 ENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLPVEKFATTRQ 231
Query: 298 VNALNPF-----LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNG 352
NP GT V +G+ + +V G T +G+L +SE + Q ++
Sbjct: 232 PEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQGISR 291
Query: 353 VATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAV 412
V+ ++ + F V+ V++ +T+ G W E A+++ V
Sbjct: 292 VSWLLIR---FMLVMAPVVLLINGYTK----GDWW-----------EAALFALSVAVGLT 333
Query: 413 PEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKAC 472
PE LP+ VT +LA K+ K +V+ L A + G+ +C+DKTGTLT + + VL
Sbjct: 334 PEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKI-VL--- 389
Query: 473 ICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNN----TGGEVVIGEGNKTEILGTPT 528
T G + S+ +L S + N TG L
Sbjct: 390 ----------ENHTDISGKT-----SERVLHSAWLNSHYQTG-------------LKNLL 421
Query: 529 ETAILEFGLLLGGDFQAERQ-ASKIVKVE--PFNSVKKQMGVVIELPEGGFRVHCKGASE 585
+TA+LE G D ++ R AS+ K++ PF+ +++M VV+ ++ CKGA E
Sbjct: 422 DTAVLE-----GVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALE 476
Query: 586 IILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIP 645
IL C + + NGE+VPL++ + + + + LR + +A +
Sbjct: 477 EILNVCSQ-VRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRAD 535
Query: 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI 705
G + DP + ++ +++G+TV+++TGD+ A + E G+ D G
Sbjct: 536 ESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGL--DAGE 593
Query: 706 AIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPA 765
+ G + SD+EL+ L + + AR +PM K +V L+ G VV GDG NDAPA
Sbjct: 594 VLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKRE-GHVVGFMGDGINDAPA 652
Query: 766 LHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQ 818
L ADIG+++ ++A+E+AD+I+L+ + + GR + N+ K+++
Sbjct: 653 LRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIK 704
|
Length = 902 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 188 bits (480), Expect = 7e-55
Identities = 79/237 (33%), Positives = 121/237 (51%), Gaps = 20/237 (8%)
Query: 210 ILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQ 269
+L+ + A +Y+ K L + V R+G +I +L+ GDIV L GD+
Sbjct: 6 VLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLKPGDR 65
Query: 270 VPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQW 329
VPADG + G S+ ++ES+LTGES PV + + +GT V +G K++VT G T+
Sbjct: 66 VPADGRIIEG-SLEVDESALTGESLPVEKSR-GDTVFAGTVVLSGELKVIVTATGEDTEL 123
Query: 330 GKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTW 389
GK+ + E +TPLQ L+ +A I+ I L A++ F + +
Sbjct: 124 GKIARLVEEAKSAKTPLQRLLDKLAKILVPIVLALAILVFLI--------------WFFR 169
Query: 390 SGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACET 446
GD LE A+ ++V A PE LPLAV L+LA ++ LV++L+A ET
Sbjct: 170 GGD----FLEALLRALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 204 bits (520), Expect = 1e-54
Identities = 195/736 (26%), Positives = 323/736 (43%), Gaps = 117/736 (15%)
Query: 127 KLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVS 186
L+T G++ + R + YG N+ V + +A ++ + +L V A +S
Sbjct: 38 NLNTH-RQGLTEED--AAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAIS 94
Query: 187 LVVGIATEGW---PKGAHDGLGIVMSILLVVFVTATSDYKQSLQ-------FKDLDREKK 236
T+ W +G L V+ IL +V ++ + Q + K + R
Sbjct: 95 FF----TDYWLPLRRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTA 150
Query: 237 KITVQ----VARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGE 292
TV RR+I + +L+PGDIVHL GD +PAD + + I+++ LTGE
Sbjct: 151 --TVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTGE 208
Query: 293 SEPV----------------------NVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWG 330
+ PV ++ L GT V +G+ +V G RT +G
Sbjct: 209 ALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFG 268
Query: 331 KLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWS 390
L ++ G +T +N V+ ++ I +V +++ G T W
Sbjct: 269 SLAKSIV-GTRAQTAFDRGVNSVSWLL--IRFMLVMVPVVLLINGF--------TKGDWL 317
Query: 391 GDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSA 450
+AL FA+AV V PE LP+ V+ +LA M K +V+ L A + G+
Sbjct: 318 --EAL----LFALAVA--VGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAM 369
Query: 451 TSICSDKTGTLTTN-----HMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSI 505
+C+DKTGTLT + H + E + ++ A+ +S S K L+
Sbjct: 370 DVLCTDKTGTLTQDRIILEHHLDVSGRKDERVLQL-------AWLNSFHQSGMKNLM--- 419
Query: 506 FNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQM 565
+ A++ F + K+ ++ PF+ V++++
Sbjct: 420 -----------------------DQAVVAFAEGNP-EIVKPAGYRKVDEL-PFDFVRRRL 454
Query: 566 GVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALR 625
VV+E +G + CKGA E +LA + V PL+EA L E + ++ R
Sbjct: 455 SVVVEDAQGQHLLICKGAVEEMLAVATH-VRDGDTVRPLDEARRERLLALAEAYNADGFR 513
Query: 626 TLCLACMEIGNEFSADAPIPTE---GYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMV 682
L +A EI + A T G + DP + ++A R G+ V+++
Sbjct: 514 VLLVATREIPGG-ESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVL 572
Query: 683 TGDN-INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTL 741
TGDN I TAK I RE G+ + G + G E D L++ + + V A+ +P+ K +
Sbjct: 573 TGDNPIVTAK-ICREVGL--EPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRV 629
Query: 742 VKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVT 801
+K L+ G V GDG NDAPAL +AD+G+++ +G ++AKESAD+I+L+ + +
Sbjct: 630 LKALQAN-GHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEE 687
Query: 802 -VAKWGRSVYINIQKF 816
V K GR + NI K+
Sbjct: 688 GVIK-GRETFGNIIKY 702
|
Length = 903 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 174 bits (442), Expect = 9e-45
Identities = 102/296 (34%), Positives = 153/296 (51%), Gaps = 26/296 (8%)
Query: 557 PFNSVKKQMGVVIELPEG-GFRVHCKGASEIILAACDKFLNSNG-EVVPLNEAAVNHLNE 614
PF+S K+M + E G + ++ KGA E I+ C +G ++ PL + +
Sbjct: 532 PFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIA 591
Query: 615 TIEKFASEALRTLCLACMEIGNEFSADAPIPTE---------GYTCIGIVGIKDPMRPGV 665
+E A+E LR L A + D + E +G++GI DP R
Sbjct: 592 NMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNES 651
Query: 666 KESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA----------IEGPEFREK 715
+V C AGI V M+TGD TAKAIA+E GI+ N I + G +F
Sbjct: 652 AGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDAL 711
Query: 716 SDEELSKLIPKIQVMARSSPMDKHTLVK--HLRTTLGEVVAVTGDGTNDAPALHEADIGL 773
SDEE+ L V+AR +P K +++ H R A+TGDG ND+P+L A++G+
Sbjct: 712 SDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAF---CAMTGDGVNDSPSLKMANVGI 768
Query: 774 AMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALI 829
AMGI G++VAK+++D+++ DDNF++I+ + GR ++ NI KFV L NV I
Sbjct: 769 AMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAI 824
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 160 bits (406), Expect = 3e-40
Identities = 179/830 (21%), Positives = 302/830 (36%), Gaps = 195/830 (23%)
Query: 129 STSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVW-EALHDMTLMILAVCALVSL 187
++G++T + +RK YG N+ E P F + E LH V + S+
Sbjct: 133 CAGHSNGLTTGDI--AQRKAKYGKNEI-EIPVPSFLELLKEEVLHP-----FYVFQVFSV 184
Query: 188 VVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGF 247
++ + E + SI L V+ KQ + +D+ K +V V RNG
Sbjct: 185 ILWLLDEYYYYSLCIVFMSSTSISLSVY----QIRKQMQRLRDM--VHKPQSVIVIRNGK 238
Query: 248 RRKISIYDLLPGDIVHLCMGDQ--VPADGLFVSGFSVLINESSLTGESEPVNVNAL---- 301
I+ +L+PGDIV + ++ +P D + +SG S ++NES LTGES PV +
Sbjct: 239 WVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSG-SCIVNESMLTGESVPVLKFPIPDNG 297
Query: 302 -------------NPFLLSGTKV-------QNGSCKMLVTTVGMRTQWGKLMATLSEGGD 341
L GTK+ + C +V G T G+L+ ++
Sbjct: 298 DDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYP-- 355
Query: 342 DETPLQVKLNGVATIIGKIGLFFAVVTFA-VMVQGLFTRKLQEGTHWTWSGDDALEILEF 400
P K + A++ F +++ + D + +
Sbjct: 356 --KPRVFKFYKDSFKFILFLAVLALIGFIYTIIELI---------------KDGRPLGKI 398
Query: 401 FAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAAC------ETMGSATSIC 454
++ I+ + VP LP +++ + ++ L + C G C
Sbjct: 399 ILRSLDIITIVVPPALPAELSIGINNSLA------RLKKKGIFCTSPFRINFAGKIDVCC 452
Query: 455 SDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVV 514
DKTGTLT + + + +E K S P+ K L T +
Sbjct: 453 FDKTGTLTEDGLDLRGVQGLSGNQEFL--KIVTEDSSLKPSITHKALA------TCHSLT 504
Query: 515 IGEGNKTEILGTPTETAILEFGLLLGGDFQAERQAS------------------KIVKVE 556
EG ++G P + + E G + + +++ I++
Sbjct: 505 KLEGK---LVGDPLDKKMFEA---TGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRF 558
Query: 557 PFNSVKKQMGVVIELPEGGFRV-HCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNET 615
F+S ++M V++ + KGA E I + C E VP + E
Sbjct: 559 QFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP------ETVPSDYQ------EV 606
Query: 616 IEKFASEALRTLCLACMEIGN-EFSADAPIPTEGYTC----IGIVGIKDPMRPGVKESVA 670
++ + E R L LA E+ + + +G + ++P++P KE +
Sbjct: 607 LKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIK 666
Query: 671 ICRSAGITVRMVTGDNINTAKAIARECG-------------------------------- 698
+ A I M+TGDN TA +ARECG
Sbjct: 667 ELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSI 726
Query: 699 ---------------------ILTDNGIAIEGPEFR---EKSDEELSKLIPKIQVMARSS 734
+ + +A+ G F S E L +L+ V AR +
Sbjct: 727 PFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMA 786
Query: 735 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDD 794
P K TLV+ L+ L V + GDG ND AL +AD+G+++ A VA A
Sbjct: 787 PDQKETLVELLQ-KLDYTVGMCGDGANDCGALKQADVGISLSEAEASVA---APFTSKLA 842
Query: 795 NFSTIVTVAKWGRSVYIN-IQKF--------VQFQLTVNVVALI-VNFSS 834
+ S + V + GR + Q F +QF +V+++ LI N
Sbjct: 843 SISCVPNVIREGRCALVTSFQMFKYMALYSLIQF-YSVSILYLIGSNLGD 891
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 128 bits (323), Expect = 1e-30
Identities = 147/621 (23%), Positives = 260/621 (41%), Gaps = 116/621 (18%)
Query: 208 MSILLVVFVTATSDYKQSLQFKDLDREKKK-ITVQVARNGFRRKISIYDLLPGDIVHLCM 266
+++L F A ++ + Q L KK + +G K+ L GDIV +
Sbjct: 75 ITVLFANFAEAVAEGRGKAQADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEA 134
Query: 267 GDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPF--LLSGTKVQNGSCKMLVTTVG 324
GD +P DG + G + ++ES++TGES PV + F + GT++ + + T
Sbjct: 135 GDVIPCDGEVIEGVAS-VDESAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTANP 193
Query: 325 MRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEG 384
T +++A + +TP ++ L ++ + L F +VT + +
Sbjct: 194 GETFLDRMIALVEGAQRRKTPNEIALT---ILLIALTLVFLLVTATLWPFAAY------- 243
Query: 385 THWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAAC 444
G +A+ + A+ V ++ + GL A+ ++ M +++ + A
Sbjct: 244 ------GGNAISVTVLVALLVCLIPTTI-GGLLSAIGIA---GMDRVLGFNVIATSGRAV 293
Query: 445 ETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQS 504
E G ++ DKTGT+T + S+ PA G A L S
Sbjct: 294 EACGDVDTLLLDKTGTITLGNRLA--------------SEFIPAQGVDEKTLADAAQLAS 339
Query: 505 IFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQ 564
+ ++T P +I+ LG + + S F + +
Sbjct: 340 LADDT-----------------PEGKSIVILAKQLG--IREDDVQSLHATFVEFTAQTRM 380
Query: 565 MGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEAL 624
G+ ++ R+ KGA + I + + +NG +P + L++ +++ A +
Sbjct: 381 SGINLD----NGRMIRKGAVDAI----KRHVEANGGHIPTD------LDQAVDQVARQGG 426
Query: 625 RTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTG 684
L + N G++ +KD ++ G+KE A R GI M+TG
Sbjct: 427 TPLVVC---EDNRI-------------YGVIYLKDIVKGGIKERFAQLRKMGIKTIMITG 470
Query: 685 DNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKH 744
DN TA AIA E G+ D+ IA PE DK L++
Sbjct: 471 DNRLTAAAIAAEAGV--DDFIAEATPE-------------------------DKIALIRQ 503
Query: 745 LRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804
+ G++VA+TGDGTNDAPAL +AD+G+AM +GT+ AKE+A+++ LD + + ++ V
Sbjct: 504 EQAE-GKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVH 561
Query: 805 WGRSVYINIQKFVQFQLTVNV 825
G+ + I F + +V
Sbjct: 562 IGKQLLITRGALTTFSIANDV 582
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 127 bits (322), Expect = 3e-30
Identities = 62/180 (34%), Positives = 97/180 (53%), Gaps = 29/180 (16%)
Query: 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
+G++ + D +RP KE++A ++ GI V M+TGDN TA+AIA+E GI
Sbjct: 529 VGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGI------------ 576
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771
+V A P DK +V+ L+ G VA+ GDG NDAPAL AD+
Sbjct: 577 ---------------DEVRAELLPEDKAEIVRELQAE-GRKVAMVGDGINDAPALAAADV 620
Query: 772 GLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVN 831
G+AMG +GT+VA E+ADV+++ D+ S + R+ I++ + + N +A+ +
Sbjct: 621 GIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLA 679
|
Length = 713 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 2e-27
Identities = 96/392 (24%), Positives = 156/392 (39%), Gaps = 82/392 (20%)
Query: 125 AEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCAL 184
AE + TSI +G+ T + +R KE G N+ + + + M+L +
Sbjct: 16 AEFIGTSIPEGL-THDEAQHRLKE-VGENRLEADSGIDAKAMLLHQVCNAMCMVL----I 69
Query: 185 VSLVVGIATEGWPKGAHDGLGIVMSILLV-VFVTATSDYKQSLQFKDLDREKKKITVQVA 243
++ + A W +G G++ +I+ + + + +YK L + V
Sbjct: 70 IAAAISFAMHDWIEG-----GVISAIIALNILIGFIQEYKAEKTMDSL-KNLASPMAHVI 123
Query: 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNP 303
RNG I +DL+PGDI L GD +PAD + + +E+ LTGES PV +A
Sbjct: 124 RNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVIKDAHAT 183
Query: 304 F--------------LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGG-------DD 342
F S + V G K + + ++ G + A L G D
Sbjct: 184 FGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKD 243
Query: 343 E----------------------------TPLQVKLNGVATIIGKIGLFFAVVTFAVMVQ 374
+ TPL KL+ +A I+ I + FA++ VM
Sbjct: 244 DPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAII---VMAA 300
Query: 375 GLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMND 434
F D + + +AI + I + +PE L +++++A M
Sbjct: 301 HKF---------------DVDKEVAIYAICLAISI--IPESLIAVLSITMAMGAANMSKR 343
Query: 435 KALVRHLAACETMGSATSICSDKTGTLTTNHM 466
+VR L A E +G+ ICSDKTGT+T M
Sbjct: 344 NVIVRKLDALEALGAVNDICSDKTGTITQGKM 375
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 116 bits (293), Expect = 4e-27
Identities = 65/181 (35%), Positives = 103/181 (56%), Gaps = 30/181 (16%)
Query: 652 IGIVGIKDPMRPGVKESVA-ICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGP 710
+G++ ++D +RP KE++A + R+ GI + M+TGDN + A+A+A E GI
Sbjct: 376 LGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID---------- 425
Query: 711 EFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770
+V A P DK +VK L+ G VVA+ GDG NDAPAL AD
Sbjct: 426 -----------------EVHAELLPEDKLAIVKELQEE-GGVVAMVGDGINDAPALAAAD 467
Query: 771 IGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIV 830
+G+AMG AG++VA E+AD+++L+D+ S++ T R I++ + + L N+VA+ +
Sbjct: 468 VGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPL 526
Query: 831 N 831
Sbjct: 527 A 527
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 117 bits (295), Expect = 5e-27
Identities = 150/565 (26%), Positives = 239/565 (42%), Gaps = 125/565 (22%)
Query: 255 DLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPF--LLSGTKVQ 312
+L GDIV + G+ +P+DG + G ++ES++TGES PV + F + GT+V
Sbjct: 122 ELKKGDIVLVEAGEIIPSDGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVL 180
Query: 313 NGSCKMLVTTVGMRTQWGKLMATLSEGGDDE-TPLQVKLN---GVATIIGKIGLFFAVVT 368
+ K+ +T T + M L EG + + TP ++ L T+I AV T
Sbjct: 181 SDWLKIRITANPGETFLDR-MIALVEGAERQKTPNEIALTILLSGLTLI----FLLAVAT 235
Query: 369 FAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAM 428
+SG A + A+ V ++ + GL A+ ++ M
Sbjct: 236 LYPFAI--------------YSGGGAASVTVLVALLVCLIPTTI-GGLLSAIGIA---GM 277
Query: 429 KKMMNDKALVRHLAACETMGSATSICSDKTGTLTT-NHMTVLKACICEEIKEVDNSKGTP 487
++ + A E G ++ DKTGT+T N S+ P
Sbjct: 278 DRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQA---------------SEFIP 322
Query: 488 AFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAER 547
G S A L S+ + T P +I+E LG + + +
Sbjct: 323 VPGVSEEELADAAQLASLADET-----------------PEGRSIVELAKKLGIELREDD 365
Query: 548 QASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEA 607
S V PF + + G ++LP G R KGA + I +++ G +P
Sbjct: 366 LQSHAEFV-PFTAQTRMSG--VDLPGG--REIRKGAVDAIR----RYVRERGGHIP---- 412
Query: 608 AVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPT-EGYTCIGIVGIKDPMRPGVK 666
E L A E+ P+ E +G++ +KD ++PG+K
Sbjct: 413 --------------EDLDA---AVDEVSR--LGGTPLVVVENGRILGVIYLKDIVKPGIK 453
Query: 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPK 726
E A R GI M+TGDN TA AIA E G+ D+
Sbjct: 454 ERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV-----------------DD-------- 488
Query: 727 IQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKES 786
+A ++P DK L++ + G +VA+TGDGTNDAPAL +AD+G+AM +GT+ AKE+
Sbjct: 489 --FIAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEA 544
Query: 787 ADVIILDDNFSTIVTVAKWGRSVYI 811
A+++ LD N + ++ V + G+ + I
Sbjct: 545 ANMVDLDSNPTKLIEVVEIGKQLLI 569
|
Length = 681 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 7e-26
Identities = 123/534 (23%), Positives = 194/534 (36%), Gaps = 152/534 (28%)
Query: 431 MMNDK----ALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACI------------- 473
M ++K A VR E +G I SDKTGTLT N M K I
Sbjct: 336 MYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIK 395
Query: 474 ------------CEEIKEVDNSKGTPAF--------GSSIPASASKLLLQS--------- 504
E V++ T + A +
Sbjct: 396 DGIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVP 455
Query: 505 IFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDF--------------QAERQAS 550
FN+ G E + + +P E A+++ +G F E +
Sbjct: 456 EFNDDGPEEITYQAA------SPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEY 509
Query: 551 KIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVN 610
+I+ V FNS +K+M V++ P+G ++ CKGA +I K L+S G V NE
Sbjct: 510 EILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIF----KRLSSGGNQV--NEETKE 563
Query: 611 HLNETIEKFASEALRTLCLACMEIG-NEF---------------------SADAPIPTEG 648
HL E +ASE LRTLC+A E+ E+ A +
Sbjct: 564 HL----ENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKD 619
Query: 649 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG---- 704
+G I+D ++ GV E++ + R AGI + ++TGD + TA I C +L+ N
Sbjct: 620 LILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIV 679
Query: 705 IAIEGPEFREKSDEELSK------------------------------LIPKIQVM---- 730
I + + + + L +++
Sbjct: 680 ITSDSLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQL 739
Query: 731 ---------ARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE 781
R SP K +V+ ++ + G+ GDG ND + EAD+G+ GI+G E
Sbjct: 740 ALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGV--GISGKE 797
Query: 782 --VAKESADVIILDDNFSTIVTVAKW-GRSVYINIQKFVQFQLTVNVVALIVNF 832
A ++D I F + + GR Y I K + + N++ I+ F
Sbjct: 798 GMQAVMASDFAI--GQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQF 849
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 2e-25
Identities = 62/177 (35%), Positives = 94/177 (53%), Gaps = 29/177 (16%)
Query: 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
G++ + D ++P KE + + GI M+TGDN TAKA+A+E GI
Sbjct: 406 AGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIEN---------- 455
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771
V A P DK L+K L+ G+VVA+ GDG NDAPAL +AD+
Sbjct: 456 -----------------VRAEVLPDDKAALIKKLQ-EKGKVVAMVGDGINDAPALAQADV 497
Query: 772 GLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVAL 828
G+A+G AGT+VA E+ADV++L ++ + + T R I++ + + NV+A+
Sbjct: 498 GIAIG-AGTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAI 553
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 1e-23
Identities = 58/182 (31%), Positives = 92/182 (50%), Gaps = 29/182 (15%)
Query: 652 IGIVGIKDPMRPGVKESVAICRSAGIT-VRMVTGDNINTAKAIARECGILTDNGIAIEGP 710
+G + + D RP E++A ++ GI V M+TGD A+ +ARE GI
Sbjct: 354 LGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID---------- 403
Query: 711 EFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770
+V A P DK +VK LR VA+ GDG NDAPAL AD
Sbjct: 404 -----------------EVHAELLPEDKLEIVKELREK-YGPVAMVGDGINDAPALAAAD 445
Query: 771 IGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIV 830
+G+AMG +G++VA E+ADV++L+D+ S + + R +++ V L + ++ +++
Sbjct: 446 VGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILL 505
Query: 831 NF 832
Sbjct: 506 AL 507
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 2e-23
Identities = 75/306 (24%), Positives = 127/306 (41%), Gaps = 43/306 (14%)
Query: 174 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTA-----------TSDY 222
TL+ LA + + + +P + + +L+
Sbjct: 150 DTLVALA--TIGAYAYSLYATLFP------VYFEEAAMLIFLFLLGRYLEARAKGRARRA 201
Query: 223 KQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSV 282
++L LD K TV V +G ++ + ++ GDIV + G+++P DG+ VSG S
Sbjct: 202 IRAL----LDLAPKTATV-VRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSS- 255
Query: 283 LINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDD 342
++ES LTGES PV + +GT +GS + VT VG T +++ + E
Sbjct: 256 SVDESMLTGESLPVEKKP-GDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSS 314
Query: 343 ETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFA 402
+ P+Q + VA+ + L A +TFA+ W G E
Sbjct: 315 KAPIQRLADRVASYFVPVVLVIAALTFAL---------------WPLFGGGDWE--TALY 357
Query: 403 IAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLT 462
A+ ++V+A P L LA ++ + + L++ A E + ++ DKTGTLT
Sbjct: 358 RALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLT 417
Query: 463 TNHMTV 468
V
Sbjct: 418 EGKPEV 423
|
Length = 713 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 5e-22
Identities = 72/296 (24%), Positives = 129/296 (43%), Gaps = 34/296 (11%)
Query: 174 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVV-FVTATSDYKQSLQFKDLD 232
LM LA + + +G+ EG +++ + L+ + + + S L
Sbjct: 2 DLLMALA--TIAAYAMGLVLEGA---------LLLFLFLLGETLEERAKGRASDALSALL 50
Query: 233 REKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGE 292
+ +G ++ + +L GDIV + G+++P DG+ +SG S ++ES+LTGE
Sbjct: 51 ALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVISGES-EVDESALTGE 109
Query: 293 SEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNG 352
S PV + + +GT +GS + VT +G + +++ + E + P+Q +
Sbjct: 110 SMPVEKKEGDE-VFAGTINGDGSLTIRVTKLGEDSTLAQIVELVEEAQSSKAPIQRLADR 168
Query: 353 VATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAV 412
+A+ L A++TF V AL A+ ++VVA
Sbjct: 169 IASYYVPAVLAIALLTFVVW--------------LALGALGALYR------ALAVLVVAC 208
Query: 413 PEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTV 468
P L LA +++ A+ L++ A E + ++ DKTGTLTT TV
Sbjct: 209 PCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTV 264
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 90.0 bits (224), Expect = 8e-22
Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 505 IFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQ 564
N E N EI+G PTE+A+L F LG D + R V PFNS +K+
Sbjct: 1 ALCNDAKFGENEEKNGGEIIGDPTESALLVFAEKLGIDVEELRARYPRVAEIPFNSERKR 60
Query: 565 MGVVIELP-EGGFRVHCKGASEIILAACDKF 594
M V +L + G+R+ KGA E IL C
Sbjct: 61 MSTVHKLEDDDGYRLFVKGAPERILERCSTI 91
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 98.0 bits (245), Expect = 5e-21
Identities = 59/144 (40%), Positives = 84/144 (58%), Gaps = 31/144 (21%)
Query: 653 GIVGIKDPMRPGVKESVAICRSAGI-TVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
G++ +KD ++PG+KE A R GI TV M+TGDN TA AIA E G+
Sbjct: 438 GVIYLKDIVKPGIKERFAELRKMGIKTV-MITGDNPLTAAAIAAEAGV------------ 484
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771
D+ L A ++P DK L++ + G +VA+TGDGTNDAPAL +AD+
Sbjct: 485 -----DDFL----------AEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADV 528
Query: 772 GLAMGIAGTEVAKESADVIILDDN 795
G+AM +GT+ AKE+ +++ LD N
Sbjct: 529 GVAMN-SGTQAAKEAGNMVDLDSN 551
|
Length = 679 |
| >gnl|CDD|204949 pfam12515, CaATP_NAI, Ca2+-ATPase N terminal autoinhibitory domain | Back alignment and domain information |
|---|
Score = 84.7 bits (210), Expect = 2e-20
Identities = 30/48 (62%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 4 YLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEA 51
YL++ F D+ AKN+SEEAL+RWR+ G VKN +RRFR+TA+L+KR EA
Sbjct: 1 YLDDPF-DIPAKNSSEEALRRWRQAVGLVKNARRRFRYTADLAKRCEA 47
|
This domain family is found in eukaryotes, and is approximately 50 amino acids in length. The family is found in association with pfam00689, pfam00122, pfam00702, pfam00690. There is a conserved RRFR sequence motif. There are two completely conserved residues (F and W) that may be functionally important. This family is the N terminal autoinhibitory domain of an endosomal Ca2+-ATPase. Length = 47 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 94.7 bits (236), Expect = 3e-20
Identities = 74/298 (24%), Positives = 130/298 (43%), Gaps = 40/298 (13%)
Query: 175 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATS--DYKQSLQFKDLD 232
LM LA AL ++ +G EG ++LL++F + +Y + L
Sbjct: 3 LLMALA--ALGAVAIGEYLEG-------------ALLLLLFSIGETLEEYASGRARRALK 47
Query: 233 REKKKI--TVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLT 290
+ T +V R G ++++ +L GD+V + G++VP DG+ +SG S ++ES+LT
Sbjct: 48 ALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSGTST-VDESALT 106
Query: 291 GESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKL 350
GES PV + + +G +G ++VT + + K++ + E + Q +
Sbjct: 107 GESVPVEKAPGDE-VFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFI 165
Query: 351 NGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVV 410
+ A + L A+ + V GL R W + A+ ++VV
Sbjct: 166 DRFARYYTPVVLAIALAIWLVP--GLLKR-------WPFW----------VYRALVLLVV 206
Query: 411 AVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTV 468
A P L ++ + A+ L++ AA E + ++ DKTGTLTT V
Sbjct: 207 ASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKV 264
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 84.6 bits (210), Expect = 6e-17
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 20/227 (8%)
Query: 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPF 304
+G ++ + L PGDIV + G+++P DG + G S ++ES +TGES PV +P
Sbjct: 99 DGEIEEVPVELLQPGDIVRVLPGEKIPVDGTVIEGESE-VDESLVTGESLPVPKKVGDP- 156
Query: 305 LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFF 364
+++GT GS + T G T +++ + + + P+Q + VA + +
Sbjct: 157 VIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAI 216
Query: 365 AVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSL 424
A++TF + W G D + LE AVT++++A P L LA +
Sbjct: 217 ALITFVI---------------WLILGADFVFALEV---AVTVLIIACPCALGLATPTVI 258
Query: 425 AFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKA 471
A A + L++ A E + ++ DKTGTLT TV
Sbjct: 259 AVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDV 305
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 82.1 bits (202), Expect = 5e-16
Identities = 59/193 (30%), Positives = 91/193 (47%), Gaps = 32/193 (16%)
Query: 636 NEFSADAPIP---TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKA 692
S P E +G++ +KD ++ G+ E R GI M TGDN TA
Sbjct: 414 KGVSKKGGTPLVVLEDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAAT 473
Query: 693 IARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEV 752
IA+E G+ + +A P DK +++ + G +
Sbjct: 474 IAKEAGV---------------------------DRFVAECKPEDKINVIREEQAK-GHI 505
Query: 753 VAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYIN 812
VA+TGDGTNDAPAL EA++GLAM +GT AKE+A++I LD N + ++ V G+ + +
Sbjct: 506 VAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMT 564
Query: 813 IQKFVQFQLTVNV 825
F + ++
Sbjct: 565 RGSLTTFSIANDI 577
|
Length = 673 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 79.3 bits (196), Expect = 4e-15
Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 31/142 (21%)
Query: 647 EGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA 706
+G++ ++D +R +++++ ++ GI M+TGDN A AIA E GI
Sbjct: 555 RNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGI------- 607
Query: 707 IEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL 766
+FR A P DK V L +A+ GDG NDAPA+
Sbjct: 608 ----DFR-----------------AGLLPEDKVKAVTELNQH--APLAMVGDGINDAPAM 644
Query: 767 HEADIGLAMGIAGTEVAKESAD 788
A IG+AMG +GT+VA E+AD
Sbjct: 645 KAASIGIAMG-SGTDVALETAD 665
|
Length = 741 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 76.3 bits (188), Expect = 4e-14
Identities = 48/131 (36%), Positives = 67/131 (51%), Gaps = 29/131 (22%)
Query: 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKS 716
I+DP+R ++ AG + M+TGDN TA AIA+E GI
Sbjct: 647 IRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGI----------------- 689
Query: 717 DEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 776
+V+A P K +K L++ G VA+ GDG NDAPAL +AD+G+AMG
Sbjct: 690 ----------DEVIAGVLPDGKAEAIKRLQSQ-GRQVAMVGDGINDAPALAQADVGIAMG 738
Query: 777 IAGTEVAKESA 787
G++VA E+A
Sbjct: 739 -GGSDVAIETA 748
|
Length = 834 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 61.8 bits (151), Expect = 3e-12
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 118 HGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLM 177
VE + +L T + G++ +E R E YG N+ E + W D ++
Sbjct: 3 TLSVEEVLARLGTDLEKGLTEAE--AEERLEKYGPNELPEKKPKSLWKIFLRQFKDPLVI 60
Query: 178 ILAVCALVS 186
IL + A+VS
Sbjct: 61 ILLIAAIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 68.8 bits (168), Expect = 1e-11
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 31/184 (16%)
Query: 542 DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEV 601
D ERQ ++ + F+S +K+M V++ P+ +V KGA + + D+ LN N V
Sbjct: 595 DIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMN--V 652
Query: 602 VPLNEAAVNHLNETIEKFASEALRTLCLACMEIGN----------EFSADAPIPTEGY-- 649
+ EA HL+ ++S LRTL + E+ + E ++ A I
Sbjct: 653 IRATEA---HLH----TYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLR 705
Query: 650 ----------TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGI 699
T +G I+D ++ GV E++ R+AGI V ++TGD TA +I +
Sbjct: 706 KVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKL 765
Query: 700 LTDN 703
LT+
Sbjct: 766 LTNK 769
|
Length = 1178 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 57.7 bits (139), Expect = 2e-09
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 17/119 (14%)
Query: 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
+G++ + DP+ PG +E++ + AGI + ++TGDN TA AIAR G+ A
Sbjct: 86 LGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGLFDALVSADLYGL 145
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770
+ K PKI +A ++ L EV+ V GDG ND PA A
Sbjct: 146 VG------VGKPDPKIFELA----------LEELGVKPEEVLMV-GDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 3e-08
Identities = 117/486 (24%), Positives = 186/486 (38%), Gaps = 79/486 (16%)
Query: 239 TVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNV 298
T +V + + + + D+ PG ++ L GD+VP DG G ++E+ LTGE P
Sbjct: 324 TARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG-EAWLDEAMLTGEPIP-QQ 381
Query: 299 NALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIG 358
+ +GT VQ+GS + VG T +++ + + Q + +
Sbjct: 382 KGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQA-------QSSKPEIGQLAD 434
Query: 359 KIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPL 418
KI F V + L W + G A +I+ IA T++++A P L L
Sbjct: 435 KISAVFVPVVVVI--------ALVSAAIWYFFG-PAPQIVYTLVIATTVLIIACPCALGL 485
Query: 419 AVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIK 478
A +S+ + + LVR A + + ++ DKTGTLT V+ +
Sbjct: 486 ATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGVD 545
Query: 479 EVDNSKGTPAF--GSSIP---ASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAIL 533
E + A GSS P A K ++ G + G G E G
Sbjct: 546 EAQALRLAAALEQGSSHPLARAILDKAGDMTLPQVNGFRTLRGLGVSGEAEGHA------ 599
Query: 534 EFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDK 593
LLLG Q +E + + +GA+ ++LA
Sbjct: 600 ---LLLGNQALLNEQQVDTKALEAEITAQAS----------------QGATPVLLAV--- 637
Query: 594 FLNSNGEVV-------PLNEAAVNHLNETIEKFASEALRTLCLACMEIG-NEFSADAPIP 645
+G+ PL +V L ++ R + M G N +A+A I
Sbjct: 638 ----DGKAAALLAIRDPLRSDSVAAL----QRLHKAGYRLV----MLTGDNPTTANA-IA 684
Query: 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR-ECGILTDNG 704
E I G+ + G E++ +S G V MV GD IN A A+A+ + GI G
Sbjct: 685 KEAGIDEVIAGV---LPDGKAEAIKRLQSQGRQVAMV-GDGINDAPALAQADVGIAMGGG 740
Query: 705 --IAIE 708
+AIE
Sbjct: 741 SDVAIE 746
|
Length = 834 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 55.5 bits (133), Expect = 8e-08
Identities = 58/260 (22%), Positives = 119/260 (45%), Gaps = 24/260 (9%)
Query: 206 IVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQ-VARNGFRRKISIYDLLPGDIVHL 264
++++++ F A ++ + Q L + + ++ + + ++G I DL G IV +
Sbjct: 72 LLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDGSYEMIDASDLKKGHIVRV 131
Query: 265 CMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPF--LLSGTKVQNGSCKMLVTT 322
G+Q+P DG + G + ++ES++TGES PV + F ++ GT V + ++ +T+
Sbjct: 132 ATGEQIPNDGKVIKGLAT-VDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEITS 190
Query: 323 VGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQ 382
+ K++ + +TP ++ L T++ + + F VV + F
Sbjct: 191 EPGHSFLDKMIGLVEGATRKKTPNEIAL---FTLLMTLTIIFLVVILTMYPLAKF----- 242
Query: 383 EGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLA 442
++ L I A+AV ++ + GL A+ ++ M ++ L +
Sbjct: 243 --LNFN------LSIAMLIALAVCLIPTTI-GGLLSAIGIA---GMDRVTQFNILAKSGR 290
Query: 443 ACETMGSATSICSDKTGTLT 462
+ ET G + DKTGT+T
Sbjct: 291 SVETCGDVNVLILDKTGTIT 310
|
Length = 673 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 53.8 bits (130), Expect = 3e-07
Identities = 25/53 (47%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPV 296
R+G R +++I DL PGD++ + G ++PADG +S F+ +ES+LTGES PV
Sbjct: 249 RDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFASF-DESALTGESIPV 300
|
Length = 741 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 47.2 bits (113), Expect = 6e-07
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
+E + E+L T + G+S+ E RR E YG N+ + H+ + IL
Sbjct: 9 LEEVLERLQTDLEKGLSSEE--AARRLERYGPNELPPPKKTSPLLRFLRQFHNPLIYILL 66
Query: 181 VCALVSLV 188
A++S +
Sbjct: 67 AAAVLSAL 74
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 5e-05
Identities = 25/114 (21%), Positives = 42/114 (36%), Gaps = 2/114 (1%)
Query: 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSK 722
PGVKE++ + GI + + T + + E G+ I +E
Sbjct: 27 PGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLF 86
Query: 723 LIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL-HEADIGLAM 775
L + + +P +K L EV+ V GD ND +G+A+
Sbjct: 87 LGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMV-GDSLNDIEMAKAAGGLGVAV 139
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 5e-05
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 15/91 (16%)
Query: 718 EELSKLIPKIQVMARSSP---------MDK----HTLVKHLRTTLGEVVAVTGDGTNDAP 764
+EL +L + + S P + K L KHL L EV+A GDG ND
Sbjct: 158 KELKELFGSLITITSSGPGYLEIMPKGVSKGTALKALAKHLGIDLEEVIAF-GDGENDIE 216
Query: 765 ALHEADIGLAMGIAGTEVAKESADVIILDDN 795
L A +G+AMG A + K +AD + +N
Sbjct: 217 MLELAGLGVAMGNA-SPEVKAAADYVTGSNN 246
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
| >gnl|CDD|232824 TIGR00099, Cof-subfamily, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 7e-05
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 741 LVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795
L + L +L +V+A GDG ND L A G+AMG A E K AD + +N
Sbjct: 196 LAEALGISLEDVIAF-GDGMNDIEMLEAAGYGVAMGNA-DEELKALADYVTDSNN 248
|
This subfamily of sequences falls within the Class-IIB subfamily (TIGR01484) of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. The use of the name "Cof" as an identifier here is arbitrary and refers to the E. coli Cof protein. This subfamily is notable for the large number of recent paralogs in many species. Listeria, for instance, has 12, Clostridium, Lactococcus and Streptococcus pneumoniae have 8 each, Enterococcus and Salmonella have 7 each, and Bacillus subtilus, Mycoplasma, Staphylococcus and E. coli have 6 each. This high degree of gene duplication is limited to the gamma proteobacteria and low-GC gram positive lineages. The profusion of genes in this subfamily is not coupled with a high degree of divergence, so it is impossible to determine an accurate phylogeny at the equivalog level. Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars. Possibly the diversification of genes in this subfamily represents the diverse sugars and polysaccharides that various bacteria find in their biological niches. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences [Unknown function, Enzymes of unknown specificity]. Length = 256 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 45.6 bits (109), Expect = 9e-05
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGF-SVLINESSLTGESEPV 296
G ++ +L GDIV + G+ +PADG + G SV +ES++TGES PV
Sbjct: 112 PGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVASV--DESAITGESAPV 162
|
Length = 679 |
| >gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 32/119 (26%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDE 718
+ PG +E VA ++AG V +++G + IA GI D +A E E D
Sbjct: 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGI--DYVVANE----LEIDDG 129
Query: 719 ELSKLIPKIQVMARSSPMDKHTLVKHLR---TTLGEVVAVTGDGTNDAPALHEADIGLA 774
+L+ + L + L E VA GD ND P L A + +A
Sbjct: 130 KLTGRVVGPICDGEGK---AKALRELAAELGIPLEETVAY-GDSANDLPMLEAAGLPIA 184
|
Length = 212 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 3e-04
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 713 REKSDEELSKL--IPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770
R+ S +L++ IP +V A + P K +++ L+ E V + G+G ND AL EAD
Sbjct: 55 RKGSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKR-YEKVVMVGNGANDILALREAD 113
Query: 771 IG-LAMGIAGT-EVAKESADVIILD 793
+G + G E +ADV++ +
Sbjct: 114 LGICTIQQEGVPERLLLTADVVLKE 138
|
Length = 152 |
| >gnl|CDD|223635 COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 6e-04
Identities = 24/51 (47%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 741 LVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVII 791
L K L L EV+A GD TND L A +G+AMG A E KE AD +
Sbjct: 197 LAKLLGIKLEEVIAF-GDSTNDIEMLEVAGLGVAMGNA-DEELKELADYVT 245
|
Length = 264 |
| >gnl|CDD|226555 COG4069, COG4069, Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.004
Identities = 41/197 (20%), Positives = 66/197 (33%), Gaps = 36/197 (18%)
Query: 598 NGEVVPLNEAAVNHLNETIEKFASEALRTL--CLACMEIGNEFSADAPIPTEGYTCIGIV 655
+GE++P N AA H + E + R EI N+ I
Sbjct: 114 DGELIPWNRAARPHAEKLSELLGLKISRPPLPVRNNGEICNQ--------IGKRVVRRIS 165
Query: 656 GIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI--AIEGPEFR 713
GV I +V G I KA + E ++ +NG IEG +
Sbjct: 166 --------GVFPGENI---------LVNG--IVVGKATSSEVELVAENGFLTDIEGGRIK 206
Query: 714 EKSDEELSKLIP-----KIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHE 768
E E+L ++ K + RS K + +V+ + +
Sbjct: 207 EHGIEKLHRVDLARAVVKTGALRRSPDEPKKVKSRKENAHAVKVILIDHAAERSYELIEG 266
Query: 769 ADIGLAMGIAGTEVAKE 785
A + + +G TEVA +
Sbjct: 267 AGLVVTVGDDTTEVAGD 283
|
Length = 367 |
| >gnl|CDD|221729 pfam12710, HAD, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 37.6 bits (87), Expect = 0.004
Identities = 22/88 (25%), Positives = 32/88 (36%), Gaps = 14/88 (15%)
Query: 681 MVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP--KIQVMARSSPMDK 738
+V+G + +A+ GI N + E E KL K + R +
Sbjct: 46 IVSGSPEPLVRPVAKALGIDDVNVVGTE-LENVLVDGRLTGKLDGEGKAAALKRLA---- 100
Query: 739 HTLVKHLRTTLGEVVAVTGDGTNDAPAL 766
+ VVAV GD +D PAL
Sbjct: 101 ------QKIGRYPVVAV-GDSISDLPAL 121
|
Length = 122 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 840 | |||
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.9 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.57 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.57 | |
| PF12515 | 47 | CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory d | 99.54 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.51 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.15 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.08 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 99.07 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.06 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.05 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.04 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.03 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.03 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.01 | |
| PLN02887 | 580 | hydrolase family protein | 98.97 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.97 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.96 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 98.94 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.9 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.86 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.85 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.84 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.82 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.76 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.71 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.62 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.58 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.56 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.54 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.52 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.47 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.43 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.36 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.33 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.32 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.21 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.18 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.15 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.15 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.13 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.1 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.09 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.06 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.04 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.95 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.89 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.84 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.82 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.81 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.72 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.68 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.64 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.6 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.59 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.59 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.57 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.55 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.47 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.38 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 97.36 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.33 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.28 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.26 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.15 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.15 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 97.05 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 97.03 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.01 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.98 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.94 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.93 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.91 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 96.88 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.76 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.73 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.69 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 96.6 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.6 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 96.55 | |
| PRK06769 | 173 | hypothetical protein; Validated | 96.54 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.4 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.4 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 96.32 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 96.29 | |
| PLN02580 | 384 | trehalose-phosphatase | 96.25 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 96.15 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 96.09 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 96.08 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.07 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 96.04 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 96.04 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 96.03 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 95.92 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 95.89 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.81 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 95.71 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 95.62 | |
| PLN02940 | 382 | riboflavin kinase | 95.59 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 95.59 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 95.58 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 95.56 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 95.05 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 94.93 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 94.8 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 94.78 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 94.78 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 94.61 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 94.55 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 94.55 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 94.51 | |
| PLN02811 | 220 | hydrolase | 94.4 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 94.38 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 94.29 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 94.22 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 94.12 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 93.81 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 93.67 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 93.54 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 92.95 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 92.64 | |
| PLN03017 | 366 | trehalose-phosphatase | 92.44 | |
| PLN02423 | 245 | phosphomannomutase | 92.24 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 92.06 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 91.1 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 90.72 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 90.45 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 90.26 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 90.16 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 89.37 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 88.73 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 88.49 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 88.26 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 86.46 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 86.41 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 86.19 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 85.3 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 84.57 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 84.48 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 84.4 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 81.73 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 81.64 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 81.47 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 81.27 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 80.98 | |
| PLN02151 | 354 | trehalose-phosphatase | 80.84 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 80.4 |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-188 Score=1550.76 Aligned_cols=814 Identities=60% Similarity=0.910 Sum_probs=766.9
Q ss_pred cccccCCCCCCCCCcHHHHHHHHHhhcccccccccchhhhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCC
Q 003189 4 YLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSS 83 (840)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~r~f~~~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 83 (840)
++.++|. .+.+|++.++++|||.|. .++|++|||||..++++..+....++ +.|+...+.+|+..|.++. +.+
T Consensus 2 ~~~~~~~-~~~~n~~~~~~~~~~~a~-~~~~~~~~~~~~~~l~~~~~~~~~r~----~~r~~~~~~~a~~~~~~~~-~~~ 74 (1034)
T KOG0204|consen 2 LLDKDFV-VSMKNSSIEALQRWRLAY-IVLEASRRFRFGASLKKLRELMEPRR----KIRSAVLVSKAAALFIDAG-SRT 74 (1034)
T ss_pred Ccccccc-cccccchhhhhhhhhhhh-hhcccchhhccccCHHHHHHHHHHHh----hhhhhhcccchhhhhhccc-ccc
Confidence 4556776 888999999999999888 99999999999999988876555444 8899999999999998874 333
Q ss_pred ccccccccccCCcccChhhhhhhhccCChhHHHHhcCHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccH
Q 003189 84 EYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGF 163 (840)
Q Consensus 84 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f 163 (840)
++.+ ++.++++.++.+.++.+.|+++||++||++.|+||+..||+.+++++.+|++.||+|.+|++++++|
T Consensus 75 e~~~---------~i~~e~l~~i~~~~~~~~L~~~gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~F 145 (1034)
T KOG0204|consen 75 EYTL---------GIGAEELVKIVKEHDLKALNAYGGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGF 145 (1034)
T ss_pred cccc---------ccCHHHHHHHhhccchhhhhhccCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccH
Confidence 2222 6788999999999999999999999999999999999999998888999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEE
Q 003189 164 WVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVA 243 (840)
Q Consensus 164 ~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~ 243 (840)
|+++|++++|.+++||.+||++|+++++++++++++||||++|+++++++++++|+++|+|++||++|+++..+.+++|+
T Consensus 146 l~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~Vi 225 (1034)
T KOG0204|consen 146 LRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVI 225 (1034)
T ss_pred HHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecccccCCCCccccCC-CCCeEEeccEEeeceEEEEEEE
Q 003189 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA-LNPFLLSGTKVQNGSCKMLVTT 322 (840)
Q Consensus 244 RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv~k~~-~~~~l~sGt~v~~G~~~~~V~~ 322 (840)
|||++++|++.|||||||+.|+.||+|||||++++|++|.+|||+|||||++++|+. .+|||+|||++.+|+++|+||+
T Consensus 226 R~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTa 305 (1034)
T KOG0204|consen 226 RGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTA 305 (1034)
T ss_pred ECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEE
Confidence 999999999999999999999999999999999999999999999999999999986 8999999999999999999999
Q ss_pred EcccchHHHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCc--cccCCcChHHHHHH
Q 003189 323 VGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTH--WTWSGDDALEILEF 400 (840)
Q Consensus 323 vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 400 (840)
||+||+||++|.++....+++||||.+|+++|..|+++++++|+++|++++++|+......+.. +.|.......++++
T Consensus 306 VGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~ 385 (1034)
T KOG0204|consen 306 VGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKF 385 (1034)
T ss_pred eeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHH
Confidence 9999999999999999998999999999999999999999999999999999999877655433 56666667889999
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeee
Q 003189 401 FAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480 (840)
Q Consensus 401 ~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~ 480 (840)
|.++++++|+|+|||||||||++|||+++|||++++|||+++||||||++++||+|||||||+|+|+|++.|++++.++.
T Consensus 386 f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~ 465 (1034)
T KOG0204|consen 386 FIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKV 465 (1034)
T ss_pred hhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887653
Q ss_pred cCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCC--ceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecC
Q 003189 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN--KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPF 558 (840)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~--~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF 558 (840)
+.. . .+.+++...+++.++++.|+++.+..++.+ .++++|+|||+|||.|+..+|+++++.|...++++++||
T Consensus 466 ~~~----~-~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~F 540 (1034)
T KOG0204|consen 466 NSP----K-SSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPF 540 (1034)
T ss_pred cCc----c-cccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEecc
Confidence 322 1 257899999999999999999999987665 889999999999999999999999999999999999999
Q ss_pred CCCCceEEEEEEeCCCc-EEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCC
Q 003189 559 NSVKKQMGVVIELPEGG-FRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE 637 (840)
Q Consensus 559 ~s~~k~~~vv~~~~~~~-~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~ 637 (840)
||.||+|+++++.++++ | +|||||+|+||++|++|++.+|+..+++++.+..+++.|+.||++||||+|+|||++...
T Consensus 541 NS~kK~~gvvi~~~~~~~y-~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~ 619 (1034)
T KOG0204|consen 541 NSVKKRMGVVIKLPDGGHY-VHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAG 619 (1034)
T ss_pred CcccceeeEEEEcCCCCeE-EEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccC
Confidence 99999999999988877 6 999999999999999999999999999999999999999999999999999999996433
Q ss_pred ----CC-CCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC--ccccCh
Q 003189 638 ----FS-ADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGP 710 (840)
Q Consensus 638 ----~~-~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~--~~~~g~ 710 (840)
++ +.++.++.+++++|++|++||+|||+++||+.|++|||+|+|+||||..||++||.+|||.++++ ++++|+
T Consensus 620 ~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~ 699 (1034)
T KOG0204|consen 620 PDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGK 699 (1034)
T ss_pred CCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecch
Confidence 22 22356789999999999999999999999999999999999999999999999999999999887 999999
Q ss_pred hhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEE
Q 003189 711 EFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVI 790 (840)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDiv 790 (840)
+|++++++++++++|+++|+||++|.||+.+|+.|+++ ||+||+||||+||+|||++||||+|||++|||+|||+||||
T Consensus 700 eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~-g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDII 778 (1034)
T KOG0204|consen 700 EFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQ-GEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDII 778 (1034)
T ss_pred hhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhc-CcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeE
Confidence 99999999999999999999999999999999999988 99999999999999999999999999999999999999999
Q ss_pred eccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 003189 791 ILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGK 840 (840)
Q Consensus 791 lldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~~~~~g~ 840 (840)
|+||||++|+++++|||++|+||+||+|||||+|++|++++|++||.+|+
T Consensus 779 i~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~d 828 (1034)
T KOG0204|consen 779 ILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGD 828 (1034)
T ss_pred EEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCC
Confidence 99999999999999999999999999999999999999999999999985
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-133 Score=1111.14 Aligned_cols=699 Identities=36% Similarity=0.559 Sum_probs=612.1
Q ss_pred CHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCCCC
Q 003189 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKG 199 (840)
Q Consensus 120 gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~ 199 (840)
.++..+..|.|++++||+.++ +.+|++.||+|+++...+.|+|+.+++||.|+.+.+|+++|++|++++.
T Consensus 8 ~v~e~~~~f~t~~~~GLt~~e--v~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~~-------- 77 (972)
T KOG0202|consen 8 SVSEVLAEFGTDLEEGLTSDE--VTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLAD-------- 77 (972)
T ss_pred cHHHHHHHhCcCcccCCCHHH--HHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHh--------
Confidence 578889999999999999987 9999999999999999999999999999999999999999999999874
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEECCeEEEEeccCCCCCcEEEecCCCcccccEEEEee
Q 003189 200 AHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSG 279 (840)
Q Consensus 200 ~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g 279 (840)
|.|+++|.+++++++.+..+++|+.++..+.|.+ +.+..++|+|+|+.+.++++||||||||.|+.||+||||.++++.
T Consensus 78 ~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~-l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~ 156 (972)
T KOG0202|consen 78 FDEPFVITLIIVINVTVGFVQEYNAEKALEALKE-LVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIEA 156 (972)
T ss_pred cccceeeeeeeeeeeeeeeeeehhhHHHHHHHHh-cCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEee
Confidence 5689999999999999999999999999999987 456699999999999999999999999999999999999999999
Q ss_pred cceEEecccccCCCCccccC-------------CCCCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCCCChH
Q 003189 280 FSVLINESSLTGESEPVNVN-------------ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPL 346 (840)
Q Consensus 280 ~~l~VDES~LTGES~pv~k~-------------~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tpl 346 (840)
.++.||||+|||||.|+.|. ...+++|+||.|..|.++++|++||.+|++|++...+++.++++|||
T Consensus 157 ~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTPL 236 (972)
T KOG0202|consen 157 KSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTPL 236 (972)
T ss_pred eeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCcH
Confidence 99999999999999999994 23568999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 003189 347 QVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAF 426 (840)
Q Consensus 347 q~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~ 426 (840)
|+++|.+...+..+..++++.+.++- ++++.... .+ +.....+..+|.+++++.|+++|||||..+|++|+.
T Consensus 237 qk~ld~~G~qLs~~is~i~v~v~~~n-ig~f~~p~-~~------g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLAL 308 (972)
T KOG0202|consen 237 QKKLDEFGKQLSKVISFICVGVWLLN-IGHFLDPV-HG------GSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLAL 308 (972)
T ss_pred HHHHHHHHHHHHHHheehhhhHHHhh-hhhhcccc-cc------ccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHH
Confidence 99999999999865554444433321 12222111 11 112235778999999999999999999999999999
Q ss_pred HHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeec------CCCCCCC----------CC
Q 003189 427 AMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVD------NSKGTPA----------FG 490 (840)
Q Consensus 427 ~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~------~~~~~~~----------~~ 490 (840)
+.+||+|++++||++.++|+||.+++||+|||||||+|+|++.++|+.+...... ...+.+. ..
T Consensus 309 G~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~ 388 (972)
T KOG0202|consen 309 GTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKD 388 (972)
T ss_pred hHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccc
Confidence 9999999999999999999999999999999999999999999999986543211 0000000 01
Q ss_pred CCCChhHHHHHHHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHcCCChHH---------------HhhccceEEE
Q 003189 491 SSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQA---------------ERQASKIVKV 555 (840)
Q Consensus 491 ~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~---------------~~~~~~i~~~ 555 (840)
.....+.+..+.+..+.|+.+.+..++.+.++..|.|||.||..++.+.++.-.. ..+.++...+
T Consensus 389 ~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~e 468 (972)
T KOG0202|consen 389 KAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAE 468 (972)
T ss_pred cccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeE
Confidence 1222334444556666666677765544566779999999999999998875422 2234456689
Q ss_pred ecCCCCCceEEEEEEeCCC--cEEEEEcCchHHHHHhcccccccCC-ceeeCCHHHHHHHHHHHHHHHHcccceeEEEEE
Q 003189 556 EPFNSVKKQMGVVIELPEG--GFRVHCKGASEIILAACDKFLNSNG-EVVPLNEAAVNHLNETIEKFASEALRTLCLACM 632 (840)
Q Consensus 556 ~pF~s~~k~~~vv~~~~~~--~~~~~~KGa~e~il~~c~~~~~~~g-~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~ 632 (840)
+||+|+||+|+|.+..+.+ ++.+|+|||+|.|+++|++++..+| ...||++..|+.+.+...+|+++||||+++|++
T Consensus 469 lpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~ 548 (972)
T KOG0202|consen 469 LPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASK 548 (972)
T ss_pred eecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEcc
Confidence 9999999999999986544 5899999999999999998887776 559999999999999999999999999999999
Q ss_pred EcCC-C-------CCCCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC
Q 003189 633 EIGN-E-------FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG 704 (840)
Q Consensus 633 ~~~~-~-------~~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~ 704 (840)
+.+. . .+..+...|++|+|+|++|+.||||++++++|+.|+++||+|+|+|||+..||.+||+++||...+.
T Consensus 549 ~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~e 628 (972)
T KOG0202|consen 549 DSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDE 628 (972)
T ss_pred CCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCc
Confidence 7763 1 1223455689999999999999999999999999999999999999999999999999999987765
Q ss_pred ----ccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCc
Q 003189 705 ----IAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780 (840)
Q Consensus 705 ----~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~ 780 (840)
.+++|++|+.++++++.+.+.+..||+|++|++|.++|++||++ |++|||||||+||+||||.||||||||++||
T Consensus 629 d~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~-geivAMTGDGVNDApALK~AdIGIAMG~~GT 707 (972)
T KOG0202|consen 629 DVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSR-GEVVAMTGDGVNDAPALKKADIGIAMGISGT 707 (972)
T ss_pred cccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhc-CCEEEecCCCccchhhhhhcccceeecCCcc
Confidence 89999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred HHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 003189 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT 838 (840)
Q Consensus 781 ~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~~~~~ 838 (840)
|+||++||+||.||||++|+.++++||.+|+|||+|+.|+|..|+.++...|+++.+.
T Consensus 708 dVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~ 765 (972)
T KOG0202|consen 708 DVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFG 765 (972)
T ss_pred HhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999998764
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-125 Score=1157.26 Aligned_cols=737 Identities=51% Similarity=0.805 Sum_probs=649.5
Q ss_pred ccCCcccChhhhhhhhcc-CChhHHHHhcCHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHH
Q 003189 92 AASGFQICPDELGSIVEG-HDIKKLKVHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEA 170 (840)
Q Consensus 92 ~~~g~~~~~~~~~~~~~~-~~~~~l~~~~gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~ 170 (840)
...||.+.-.++.++.+. ++.+.|..+||++++++.|++++..||+.+++++++|+++||+|+++.+++++||++++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~ 93 (941)
T TIGR01517 14 FTDGFDVGVSILTDLTDIFKRAPIYEKLGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAA 93 (941)
T ss_pred cCCCCCCCHHHHHHhcCchhhHHHHHHhCCHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHH
Confidence 456899999999998865 5678889999999999999999999999444459999999999999999999999999999
Q ss_pred HhhhHHHHHHHHHHHHHHhhhc-----ccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEEC
Q 003189 171 LHDMTLMILAVCALVSLVVGIA-----TEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARN 245 (840)
Q Consensus 171 l~~~~~~il~i~a~is~~~~~~-----~~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~Rd 245 (840)
|+++++++|++++++++++++. .++....|+|++.|+++++++++++++.+|++++++++|++..++.+++|+||
T Consensus 94 f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRd 173 (941)
T TIGR01517 94 LSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRG 173 (941)
T ss_pred HhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 9999999999999999998753 22334589999999999999999999999999999999987666779999999
Q ss_pred CeEEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecccccCCCCccccCCC-CCeEEeccEEeeceEEEEEEEEc
Q 003189 246 GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL-NPFLLSGTKVQNGSCKMLVTTVG 324 (840)
Q Consensus 246 G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv~k~~~-~~~l~sGt~v~~G~~~~~V~~vG 324 (840)
|++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.|+.|..+ ++++|+||.|.+|.++++|++||
T Consensus 174 G~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG 253 (941)
T TIGR01517 174 GQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVG 253 (941)
T ss_pred CEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeC
Confidence 99999999999999999999999999999999997789999999999999999854 46899999999999999999999
Q ss_pred ccchHHHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHH
Q 003189 325 MRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIA 404 (840)
Q Consensus 325 ~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 404 (840)
.+|++|+|++++.++. +++|+|++++++++++.++++.+++++|+++++.++......+.. ........+...|..+
T Consensus 254 ~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a 330 (941)
T TIGR01517 254 VNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGR--DTEEDAQTFLDHFIIA 330 (941)
T ss_pred CCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc--ccchhhHHHHHHHHHH
Confidence 9999999999998765 568999999999999999999999888888765543321111000 0001112577889999
Q ss_pred HHHHHHhcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCC
Q 003189 405 VTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSK 484 (840)
Q Consensus 405 i~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ 484 (840)
+++++++||||||+++|+++++++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..+..+.
T Consensus 331 l~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~-- 408 (941)
T TIGR01517 331 VTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRD-- 408 (941)
T ss_pred HHHHHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCc--
Confidence 999999999999999999999999999999999999999999999999999999999999999999987655433211
Q ss_pred CCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCce
Q 003189 485 GTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQ 564 (840)
Q Consensus 485 ~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~ 564 (840)
.....++...+++..++++|+......++.+.....|||+|.|+++++...+.+....+..+++++.+||+|++|+
T Consensus 409 ----~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ 484 (941)
T TIGR01517 409 ----VLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKF 484 (941)
T ss_pred ----ccccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCe
Confidence 1111234455666677777765543322233345689999999999998888887777777888999999999999
Q ss_pred EEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCC
Q 003189 565 MGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPI 644 (840)
Q Consensus 565 ~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~ 644 (840)
|+++++.+++.+++++|||||.+++.|+.+++.+|...++++ .++.+++.+++|+++|+|++++||++++.+.....+.
T Consensus 485 msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~ 563 (941)
T TIGR01517 485 MSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDY 563 (941)
T ss_pred EEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccc
Confidence 999999877779999999999999999988777888888887 7788999999999999999999999986543322334
Q ss_pred CCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhc
Q 003189 645 PTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (840)
Q Consensus 645 ~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~ 724 (840)
.+++++|+|+++|+||+||+++++|+.|+++||+++|+|||++.||.++|++|||..++..+++|++++.++++++.+.+
T Consensus 564 ~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i 643 (941)
T TIGR01517 564 PNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPIL 643 (941)
T ss_pred cccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHh
Confidence 47899999999999999999999999999999999999999999999999999999877899999999999999999999
Q ss_pred CCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 725 PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 725 ~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
++..||||++|+||+++|+.||++ |++|+|||||+||+|||++||||||||++|+|+||++||+||+||||++|+++++
T Consensus 644 ~~~~Vfar~sPe~K~~iV~~lq~~-g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~ 722 (941)
T TIGR01517 644 PKLRVLARSSPLDKQLLVLMLKDM-GEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVK 722 (941)
T ss_pred ccCeEEEECCHHHHHHHHHHHHHC-CCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHH
Confidence 999999999999999999999998 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 003189 805 WGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839 (840)
Q Consensus 805 ~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~~~~~g 839 (840)
+||++|+||+|+++|++++|+..+++++++.++.+
T Consensus 723 ~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~ 757 (941)
T TIGR01517 723 WGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISS 757 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999888754
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-120 Score=1108.78 Aligned_cols=688 Identities=29% Similarity=0.426 Sum_probs=594.0
Q ss_pred cCHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCCC
Q 003189 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPK 198 (840)
Q Consensus 119 ~gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~ 198 (840)
..++.+.+.|++++..||++++ +++|++.||+|+++.++.+++|+.++++|+++++++|+++++++++++
T Consensus 10 ~~~~~v~~~l~t~~~~GLs~~e--a~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~-------- 79 (1053)
T TIGR01523 10 DIADEAAEFIGTSIPEGLTHDE--AQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH-------- 79 (1053)
T ss_pred CCHHHHHHHhCcCcccCCCHHH--HHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh--------
Confidence 3578889999999989999977 999999999999999999999999999999999999999999999875
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEECCeEEEEeccCCCCCcEEEecCCCcccccEEEEe
Q 003189 199 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 278 (840)
Q Consensus 199 ~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~ 278 (840)
.|+|++.|++.+++..+++.+++|+.+++.++|.+. .+.+++|+|||++++|+++||||||||.|++||+|||||+|++
T Consensus 80 ~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l-~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~ 158 (1053)
T TIGR01523 80 DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNL-ASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIE 158 (1053)
T ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEE
Confidence 589999999999999999999999999999999975 4558999999999999999999999999999999999999999
Q ss_pred ecceEEecccccCCCCccccCCC--------------CCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCC---
Q 003189 279 GFSVLINESSLTGESEPVNVNAL--------------NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGD--- 341 (840)
Q Consensus 279 g~~l~VDES~LTGES~pv~k~~~--------------~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~--- 341 (840)
+++|.||||+|||||.||.|... .+++|+||.|.+|.++++|++||.+|++|+|.+++.+...
T Consensus 159 ~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~~ 238 (1053)
T TIGR01523 159 TKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQ 238 (1053)
T ss_pred eCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhccc
Confidence 99999999999999999999631 3579999999999999999999999999999998864321
Q ss_pred --------------------------------CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCcccc
Q 003189 342 --------------------------------DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTW 389 (840)
Q Consensus 342 --------------------------------~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~ 389 (840)
.+||||+++++++.++..+++++++++|++....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~-------------- 304 (1053)
T TIGR01523 239 RPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFD-------------- 304 (1053)
T ss_pred cccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--------------
Confidence 2499999999999999888888877766542110
Q ss_pred CCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEE
Q 003189 390 SGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVL 469 (840)
Q Consensus 390 ~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~ 469 (840)
.+...+.++++++|+++|+|||+.+++++++++++|+++|++||+++++|+||++|+||+|||||||+|+|+|+
T Consensus 305 ------~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~ 378 (1053)
T TIGR01523 305 ------VDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIAR 378 (1053)
T ss_pred ------hhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEE
Confidence 11355677899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcC-eeeeecCC--CCCCC------------------------C-------------CCCCChhHHHHHHHHHHhcC
Q 003189 470 KACICE-EIKEVDNS--KGTPA------------------------F-------------GSSIPASASKLLLQSIFNNT 509 (840)
Q Consensus 470 ~~~~~~-~~~~~~~~--~~~~~------------------------~-------------~~~~~~~~~~~l~~~i~~~~ 509 (840)
++|..+ ..+..+.. .+.+. . .....++....+.....+|+
T Consensus 379 ~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn 458 (1053)
T TIGR01523 379 QIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALAN 458 (1053)
T ss_pred EEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhcc
Confidence 999764 12221110 00000 0 00000112233445555566
Q ss_pred CceEEec-CCCceeEcCChhhHHHHHHHHHcCCChH------HH-------------------hhccceEEEecCCCCCc
Q 003189 510 GGEVVIG-EGNKTEILGTPTETAILEFGLLLGGDFQ------AE-------------------RQASKIVKVEPFNSVKK 563 (840)
Q Consensus 510 ~~~~~~~-~~~~~~~~g~p~e~All~~~~~~~~~~~------~~-------------------~~~~~i~~~~pF~s~~k 563 (840)
.+.+..+ .++.+...|+|+|.||+.++.+.|++.. .. +..+++++.+||+|+||
T Consensus 459 ~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK 538 (1053)
T TIGR01523 459 IATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIK 538 (1053)
T ss_pred CCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCC
Confidence 5655432 2234466899999999999988876421 11 23467899999999999
Q ss_pred eEEEEEEeCCC-cEEEEEcCchHHHHHhcccccccCC-ceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCC-
Q 003189 564 QMGVVIELPEG-GFRVHCKGASEIILAACDKFLNSNG-EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA- 640 (840)
Q Consensus 564 ~~~vv~~~~~~-~~~~~~KGa~e~il~~c~~~~~~~g-~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~- 640 (840)
||+++++.+++ .+++|+|||||.|+++|+++...+| ...|++++.++.+.+.+++|+++|+||+++|||+++.+...
T Consensus 539 ~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~ 618 (1053)
T TIGR01523 539 RMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNND 618 (1053)
T ss_pred eEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccc
Confidence 99999986544 5889999999999999998766555 56799999999999999999999999999999998643110
Q ss_pred --------CCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----------
Q 003189 641 --------DAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD---------- 702 (840)
Q Consensus 641 --------~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~---------- 702 (840)
..+..|++++|+|+++|+||+||+++++|+.|+++||+|+|+|||++.||.++|++|||..+
T Consensus 619 ~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~ 698 (1053)
T TIGR01523 619 DQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIM 698 (1053)
T ss_pred hhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccc
Confidence 11245789999999999999999999999999999999999999999999999999999754
Q ss_pred CCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHH
Q 003189 703 NGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV 782 (840)
Q Consensus 703 ~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ 782 (840)
...+++|.++..++++++.+.+.+..||||++|+||.++|+.||++ |++|+|||||+||+|||++||||||||++|+|+
T Consensus 699 ~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~-g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~v 777 (1053)
T TIGR01523 699 DSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRR-KAFCAMTGDGVNDSPSLKMANVGIAMGINGSDV 777 (1053)
T ss_pred cceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhc-CCeeEEeCCCcchHHHHHhCCccEecCCCccHH
Confidence 2479999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 003189 783 AKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT 838 (840)
Q Consensus 783 ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~~~~~ 838 (840)
||++||++|+||||++|++++++||++|+||+|+++|.|+.|+..+++.+++.++.
T Consensus 778 ak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~ 833 (1053)
T TIGR01523 778 AKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFR 833 (1053)
T ss_pred HHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999998888773
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-119 Score=1091.42 Aligned_cols=678 Identities=37% Similarity=0.559 Sum_probs=601.3
Q ss_pred HHHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCCCCcch
Q 003189 123 GIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHD 202 (840)
Q Consensus 123 ~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d 202 (840)
.+...+.++...||+.++ +.+|+..||.|+++..+..++|..++.+|++++.++|+++++++.+++.+.... .+
T Consensus 32 ~~~~~~~~~~~~GLs~~e--~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~----~~ 105 (917)
T COG0474 32 ELLLELFTSPTTGLSEEE--VKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAG----VD 105 (917)
T ss_pred hHHHhhcCCcccCCCHHH--HHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC----cc
Confidence 456677888899999965 999999999999999999999999999999999999999999999887532110 45
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEECCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecce
Q 003189 203 GLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSV 282 (840)
Q Consensus 203 ~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l 282 (840)
...|...+++..++..+.+|+.++..+.|.+.. +..++|+|||++++|+++||||||||.|++||+||||+++++++++
T Consensus 106 ~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~-~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l 184 (917)
T COG0474 106 AIVILLVVVINALLGFVQEYRAEKALEALKKMS-SPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDL 184 (917)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecCc
Confidence 556777777777888888888888888888755 5689999999999999999999999999999999999999999988
Q ss_pred EEecccccCCCCccccC-------------CCCCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCCCChHHHH
Q 003189 283 LINESSLTGESEPVNVN-------------ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVK 349 (840)
Q Consensus 283 ~VDES~LTGES~pv~k~-------------~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~ 349 (840)
.||||+|||||.|+.|. ..++++|+||.|.+|.++++|++||.+|+.|++..++......+||+|++
T Consensus 185 ~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~ 264 (917)
T COG0474 185 EVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRK 264 (917)
T ss_pred eEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHHHH
Confidence 99999999999999995 34688999999999999999999999999999999999886677999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 003189 350 LNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMK 429 (840)
Q Consensus 350 l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~ 429 (840)
++++..++..+++++++++|++... .. + . .+...|+.++++++.++|+|||+.++++++.+++
T Consensus 265 l~~~~~~l~~~~l~~~~~~~~~~~~---~~----~-------~---~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~ 327 (917)
T COG0474 265 LNKLGKFLLVLALVLGALVFVVGLF---RG----G-------N---GLLESFLTALALAVAAVPEGLPAVVTIALALGAQ 327 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---hc----C-------c---cHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH
Confidence 9999999999999888888876521 10 0 0 1568899999999999999999999999999999
Q ss_pred HHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcC
Q 003189 430 KMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNT 509 (840)
Q Consensus 430 ~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 509 (840)
+|.+++++||+++++|+||++++||||||||||+|+|+|.+++..+...+.+ ......++... .+...+++|+
T Consensus 328 ~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~------~~~~~~~~~~~-~~l~~~~lc~ 400 (917)
T COG0474 328 RMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDID------DKDLKDSPALL-RFLLAAALCN 400 (917)
T ss_pred HHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCccccc------ccccccchHHH-HHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999985110000 00111112222 3445556666
Q ss_pred CceEEecCCCceeEcCChhhHHHHHHHHHcCC--ChHHHhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHH
Q 003189 510 GGEVVIGEGNKTEILGTPTETAILEFGLLLGG--DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEII 587 (840)
Q Consensus 510 ~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~--~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~KGa~e~i 587 (840)
+.....+ + ++..|||+|.||++++.+.|. +....+..+++++.+||+|+||||+++++.+++++.+++|||||.|
T Consensus 401 ~~~~~~~-~--~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~i 477 (917)
T COG0474 401 SVTPEKN-G--WYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVI 477 (917)
T ss_pred ccccccc-C--ceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHH
Confidence 6555444 3 677999999999999999988 7778888889999999999999999999977777999999999999
Q ss_pred HHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCC-CCCCCceeeeeeecccCCCCcchH
Q 003189 588 LAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADA-PIPTEGYTCIGIVGIKDPMRPGVK 666 (840)
Q Consensus 588 l~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~-~~~~~~~~~lg~~~~~D~lR~~~~ 666 (840)
+++|+++ +...+++++.++.+++..++|+++|+|++++|||..+..+.... +..|+|++|+|+++|+||||++++
T Consensus 478 l~~~~~~----~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~ 553 (917)
T COG0474 478 LERCKSI----GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVK 553 (917)
T ss_pred HHHhccc----CcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHH
Confidence 9999976 77789999999999999999999999999999997765533222 467899999999999999999999
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC--CccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHH
Q 003189 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKH 744 (840)
Q Consensus 667 ~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~ 744 (840)
++|+.|++|||+++|+||||+.||.+||++|||..+. .++++|.++..++++++.+.+.+..||||++|+||.++|+.
T Consensus 554 ~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~ 633 (917)
T COG0474 554 EAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEA 633 (917)
T ss_pred HHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHH
Confidence 9999999999999999999999999999999998776 35999999999999999999999999999999999999999
Q ss_pred HHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 745 LRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVN 824 (840)
Q Consensus 745 l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N 824 (840)
||++ |++|+|||||+||+||||+||||||||+.|+|+||++||++++||||++|+.++++||++|.|++|++.|.++.|
T Consensus 634 lq~~-g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n 712 (917)
T COG0474 634 LQKS-GHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKN 712 (917)
T ss_pred HHhC-CCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 9999 999999999999999999999999999899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcC
Q 003189 825 VVALIVNFSSACLTG 839 (840)
Q Consensus 825 ~~~l~~~~~~~~~~g 839 (840)
+..+++.+++.++..
T Consensus 713 ~~~~~~~~~~~~~~~ 727 (917)
T COG0474 713 VGEVLTLLIYSLFNL 727 (917)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999988888877653
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-116 Score=1083.38 Aligned_cols=698 Identities=30% Similarity=0.429 Sum_probs=596.6
Q ss_pred cCHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhccc----
Q 003189 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATE---- 194 (840)
Q Consensus 119 ~gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~---- 194 (840)
..++++.+.|++++..||++++ +++|+++||+|+++.++.+++|+.++++|++++.++|++++++++++....+
T Consensus 20 ~~~~~~~~~l~t~~~~GLs~~e--~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~ 97 (997)
T TIGR01106 20 LSLDELERKYGTDLSKGLSAAR--AAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEE 97 (997)
T ss_pred CCHHHHHHHhCcCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCC
Confidence 4688899999999999999977 9999999999999999999999999999999999999999999876533221
Q ss_pred -CCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEECCeEEEEeccCCCCCcEEEecCCCccccc
Q 003189 195 -GWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPAD 273 (840)
Q Consensus 195 -~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaD 273 (840)
.....|++++.+++.+++..++..+.+++.++..+++.+ ..+..++|+|||++++|+++||||||+|.|++||+||||
T Consensus 98 ~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~-~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD 176 (997)
T TIGR01106 98 EPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKN-MVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPAD 176 (997)
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeee
Confidence 112468888866655555555555555555555555655 345689999999999999999999999999999999999
Q ss_pred EEEEeecceEEecccccCCCCccccCCCC---------CeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCCCC
Q 003189 274 GLFVSGFSVLINESSLTGESEPVNVNALN---------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDET 344 (840)
Q Consensus 274 gvll~g~~l~VDES~LTGES~pv~k~~~~---------~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~t 344 (840)
|++++|+++.||||+|||||.|+.|.+++ +++|+||.|.+|.++++|++||.+|.+|++.+++.+...+++
T Consensus 177 ~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~ 256 (997)
T TIGR01106 177 LRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENGKT 256 (997)
T ss_pred EEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcccCCC
Confidence 99999988999999999999999997543 479999999999999999999999999999999988888889
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 003189 345 PLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSL 424 (840)
Q Consensus 345 plq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l 424 (840)
|+|+++++++..+..+++++++++|++++.. +. .+...+.+++++++++||||||+++++++
T Consensus 257 pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~----------~~~~~~~~~i~v~v~~iP~~L~~~v~i~l 318 (997)
T TIGR01106 257 PIAIEIEHFIHIITGVAVFLGVSFFILSLIL--------GY----------TWLEAVIFLIGIIVANVPEGLLATVTVCL 318 (997)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------cC----------CHHHHHHHHHHHHhhcCCccchHHHHHHH
Confidence 9999999999999998888887776654321 00 24567788999999999999999999999
Q ss_pred HHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHH
Q 003189 425 AFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQS 504 (840)
Q Consensus 425 ~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 504 (840)
++++++|+++|++||+++++|+||++|+||||||||||+|+|+|.++|+.+..+..+.................+.+...
T Consensus 319 ~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 398 (997)
T TIGR01106 319 TLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRI 398 (997)
T ss_pred HHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988776543221100000001111233345556
Q ss_pred HHhcCCceEEecCCC----ceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeC---CCcEE
Q 003189 505 IFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP---EGGFR 577 (840)
Q Consensus 505 i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~---~~~~~ 577 (840)
++.|+++....+.++ .....|+|+|.||++++...+.+....+..+++++.+||+|+||+|++++... ++.++
T Consensus 399 ~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~ 478 (997)
T TIGR01106 399 AGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHL 478 (997)
T ss_pred HHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEE
Confidence 666766655433222 23457999999999999877667777788899999999999999999987643 24688
Q ss_pred EEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCC--------CCCCCCCce
Q 003189 578 VHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA--------DAPIPTEGY 649 (840)
Q Consensus 578 ~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~--------~~~~~~~~~ 649 (840)
+++|||||.|++.|++++ .+|...+++++.++.+++.+++|+++|+|++++|||+++.+... +.+..|+++
T Consensus 479 ~~~KGApe~Il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L 557 (997)
T TIGR01106 479 LVMKGAPERILERCSSIL-IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNL 557 (997)
T ss_pred EEEeCChHHHHHHhhHHh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCc
Confidence 999999999999999876 57888999999999999999999999999999999998643111 012237899
Q ss_pred eeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC------------------------Cc
Q 003189 650 TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN------------------------GI 705 (840)
Q Consensus 650 ~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~------------------------~~ 705 (840)
+|+|+++++||+||+++++|++|+++||+|+|+|||+..||.++|+++||..++ ..
T Consensus 558 ~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 637 (997)
T TIGR01106 558 CFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKAC 637 (997)
T ss_pred EEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccce
Confidence 999999999999999999999999999999999999999999999999997542 26
Q ss_pred cccChhhhcCCHHHHhhhcCCce--EEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHH
Q 003189 706 AIEGPEFREKSDEELSKLIPKIQ--VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVA 783 (840)
Q Consensus 706 ~~~g~~~~~~~~~~~~~~~~~~~--v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~a 783 (840)
+++|.+++.++++++.+.+++.. ||||++|+||+++|+.||+. |++|+|+|||.||+|||++||||||||++|+|++
T Consensus 638 vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~-g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~va 716 (997)
T TIGR01106 638 VVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVS 716 (997)
T ss_pred EEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHC-CCEEEEECCCcccHHHHhhCCcceecCCcccHHH
Confidence 99999999999999999987764 99999999999999999998 9999999999999999999999999998999999
Q ss_pred HhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 003189 784 KESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839 (840)
Q Consensus 784 k~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~~~~~g 839 (840)
|++||+||+||||++|+++++|||++|.||+|+++|+++.|+..+++.++++++.+
T Consensus 717 k~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~ 772 (997)
T TIGR01106 717 KQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANI 772 (997)
T ss_pred HHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999887753
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-117 Score=1069.15 Aligned_cols=653 Identities=25% Similarity=0.398 Sum_probs=575.4
Q ss_pred CHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCCCC
Q 003189 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKG 199 (840)
Q Consensus 120 gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~ 199 (840)
..+.+.+.++++. .||++++ +++|++.||+|+++.++++++|+.+|++|++++.++++++++++++++ .
T Consensus 53 ~~~~v~~~l~~~~-~GLs~~e--a~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~--------~ 121 (902)
T PRK10517 53 PEEELWKTFDTHP-EGLNEAE--VESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE--------D 121 (902)
T ss_pred CHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc--------c
Confidence 4677778888886 6999877 999999999999999999999999999999999999999999998765 5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEEC------CeEEEEeccCCCCCcEEEecCCCccccc
Q 003189 200 AHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARN------GFRRKISIYDLLPGDIVHLCMGDQVPAD 273 (840)
Q Consensus 200 ~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~Rd------G~~~~I~~~dLvvGDIV~l~~Gd~VPaD 273 (840)
|++++.|++.+++..++..+.+++.++..++|.+.. +.+++|+|| |++++|+++||||||+|.|++||+||||
T Consensus 122 ~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~-~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaD 200 (902)
T PRK10517 122 LFAAGVIALMVAISTLLNFIQEARSTKAADALKAMV-SNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPAD 200 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeee
Confidence 889998888888888888888988888888888754 458999999 7899999999999999999999999999
Q ss_pred EEEEeecceEEecccccCCCCccccCCCC------------CeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCC
Q 003189 274 GLFVSGFSVLINESSLTGESEPVNVNALN------------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGD 341 (840)
Q Consensus 274 gvll~g~~l~VDES~LTGES~pv~k~~~~------------~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~ 341 (840)
|++++|+++.||||+|||||.|+.|..++ +.+|+||.|.+|+++++|++||.+|++|+|.+++.+...
T Consensus 201 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~ 280 (902)
T PRK10517 201 LRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDS 280 (902)
T ss_pred EEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCC
Confidence 99999988999999999999999997543 479999999999999999999999999999999999888
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHH
Q 003189 342 DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVT 421 (840)
Q Consensus 342 ~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~ 421 (840)
+++|+|+.++++++++..++++++.++++++.. . .+ ++...+.+++++++++||||||++++
T Consensus 281 ~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~---~----~~-----------~~~~~l~~alsv~V~~~Pe~LP~~vt 342 (902)
T PRK10517 281 EPNAFQQGISRVSWLLIRFMLVMAPVVLLINGY---T----KG-----------DWWEAALFALSVAVGLTPEMLPMIVT 342 (902)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHH---h----cC-----------CHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 899999999999999998888777766655321 0 00 25577889999999999999999999
Q ss_pred HHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHH
Q 003189 422 LSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLL 501 (840)
Q Consensus 422 l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 501 (840)
++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++.... .+ ..+++
T Consensus 343 ~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~----------------~~--~~~ll 404 (902)
T PRK10517 343 STLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISG----------------KT--SERVL 404 (902)
T ss_pred HHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCC----------------CC--HHHHH
Confidence 9999999999999999999999999999999999999999999999987632110 00 11222
Q ss_pred HHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEc
Q 003189 502 LQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCK 581 (840)
Q Consensus 502 ~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~K 581 (840)
...+.|+.. . ...+||+|.|+++++...+ .......++.++.+||+|.+|+|+++++..++.+.+++|
T Consensus 405 -~~a~l~~~~--~-------~~~~~p~d~All~~a~~~~--~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~K 472 (902)
T PRK10517 405 -HSAWLNSHY--Q-------TGLKNLLDTAVLEGVDEES--ARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICK 472 (902)
T ss_pred -HHHHhcCCc--C-------CCCCCHHHHHHHHHHHhcc--hhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEe
Confidence 223333321 1 1268999999999986543 123345677889999999999999998877777889999
Q ss_pred CchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCC
Q 003189 582 GASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPM 661 (840)
Q Consensus 582 Ga~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~l 661 (840)
|+||.+++.|+++. .+|...+++++.++.+.+..++++++|+|++++|||+++.++.......|++++|+|+++|+||+
T Consensus 473 Ga~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~ 551 (902)
T PRK10517 473 GALEEILNVCSQVR-HNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPP 551 (902)
T ss_pred CchHHHHHhchhhh-cCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcc
Confidence 99999999999875 46677899999999999999999999999999999987654321111236799999999999999
Q ss_pred CcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHH
Q 003189 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTL 741 (840)
Q Consensus 662 R~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~ 741 (840)
||+++++|++|+++||+|+|+||||+.||.++|+++||. ++.+++|.+++.++++++.+.++++.||||++|+||.++
T Consensus 552 R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~--~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~I 629 (902)
T PRK10517 552 KETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD--AGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERI 629 (902)
T ss_pred hhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--ccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHH
Confidence 999999999999999999999999999999999999995 357999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 742 VKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQL 821 (840)
Q Consensus 742 V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l 821 (840)
|+.||++ |++|+|||||+||+|||++|||||||| +|+|+||++||+||+||||++|++++++||++|+||+|+++|++
T Consensus 630 V~~Lq~~-G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~l 707 (902)
T PRK10517 630 VTLLKRE-GHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTA 707 (902)
T ss_pred HHHHHHC-CCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998 999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhh
Q 003189 822 TVNVVALIVNFSSACL 837 (840)
Q Consensus 822 ~~N~~~l~~~~~~~~~ 837 (840)
+.|+..++..++++++
T Consensus 708 s~n~~~v~~~~~~~~~ 723 (902)
T PRK10517 708 SSNFGNVFSVLVASAF 723 (902)
T ss_pred HhhHHHHHHHHHHHHH
Confidence 9999998888877665
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-116 Score=1063.23 Aligned_cols=661 Identities=26% Similarity=0.397 Sum_probs=576.2
Q ss_pred CHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhccc---CC
Q 003189 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATE---GW 196 (840)
Q Consensus 120 gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~---~~ 196 (840)
..+.+...|+++. .||++++ +++|+++||+|+++.++.+++|+.++++|++++.++|+++++++++++.+.. +.
T Consensus 31 ~~~~v~~~l~~~~-~GLs~~e--a~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~ 107 (903)
T PRK15122 31 SLEETLANLNTHR-QGLTEED--AAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGE 107 (903)
T ss_pred CHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCc
Confidence 4667777888884 7999877 9999999999999999999999999999999999999999999998875421 22
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEEC------CeEEEEeccCCCCCcEEEecCCCcc
Q 003189 197 PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARN------GFRRKISIYDLLPGDIVHLCMGDQV 270 (840)
Q Consensus 197 ~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~Rd------G~~~~I~~~dLvvGDIV~l~~Gd~V 270 (840)
...|++++.|++.+++..++..+.+|+.+++.++|.+.. +..++|+|| |++++|+++||||||+|.|++||+|
T Consensus 108 ~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~-~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~I 186 (903)
T PRK15122 108 ETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMV-RTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMI 186 (903)
T ss_pred cccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEE
Confidence 246999999999999999999999999999999998754 458999999 4799999999999999999999999
Q ss_pred cccEEEEeecceEEecccccCCCCccccCC--C--------------------CCeEEeccEEeeceEEEEEEEEcccch
Q 003189 271 PADGLFVSGFSVLINESSLTGESEPVNVNA--L--------------------NPFLLSGTKVQNGSCKMLVTTVGMRTQ 328 (840)
Q Consensus 271 PaDgvll~g~~l~VDES~LTGES~pv~k~~--~--------------------~~~l~sGt~v~~G~~~~~V~~vG~~T~ 328 (840)
||||++++|+++.||||+|||||.|+.|.. + ++.+|+||.|.+|+++++|++||.+|+
T Consensus 187 PaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~ 266 (903)
T PRK15122 187 PADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTY 266 (903)
T ss_pred eeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccH
Confidence 999999999889999999999999999974 1 267999999999999999999999999
Q ss_pred HHHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHH
Q 003189 329 WGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIV 408 (840)
Q Consensus 329 ~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~il 408 (840)
+|+|.+++.+ ...++|+|++++++++++..+++.++.+++++.. +. . .++.+.+.++++++
T Consensus 267 ~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~---~~----~-----------~~~~~~l~~aisl~ 327 (903)
T PRK15122 267 FGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLING---FT----K-----------GDWLEALLFALAVA 327 (903)
T ss_pred hhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhh---hc----c-----------CCHHHHHHHHHHHH
Confidence 9999999987 5567999999999999988877766655444321 10 0 03567888999999
Q ss_pred HHhcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCC
Q 003189 409 VVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPA 488 (840)
Q Consensus 409 vva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~ 488 (840)
+++||||||++++++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+..
T Consensus 328 V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~----------- 396 (903)
T PRK15122 328 VGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR----------- 396 (903)
T ss_pred HHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC-----------
Confidence 999999999999999999999999999999999999999999999999999999999999987643211
Q ss_pred CCCCCChhHHHHHHHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEE
Q 003189 489 FGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVV 568 (840)
Q Consensus 489 ~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv 568 (840)
.+++ ++..+ +.|+.. . ..++||+|.|+++++.+.+.+ .....++.++.+||+|.+|+|+++
T Consensus 397 ----~~~~---~l~~a-~l~s~~--~-------~~~~~p~e~All~~a~~~~~~--~~~~~~~~~~~~pF~s~~k~ms~v 457 (903)
T PRK15122 397 ----KDER---VLQLA-WLNSFH--Q-------SGMKNLMDQAVVAFAEGNPEI--VKPAGYRKVDELPFDFVRRRLSVV 457 (903)
T ss_pred ----ChHH---HHHHH-HHhCCC--C-------CCCCChHHHHHHHHHHHcCch--hhhhcCceEEEeeeCCCcCEEEEE
Confidence 0112 22222 223211 0 126899999999999876542 233467788999999999999999
Q ss_pred EEeCCCcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCC--CCCCC
Q 003189 569 IELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSAD--APIPT 646 (840)
Q Consensus 569 ~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~--~~~~~ 646 (840)
++..++++++++||+||.+++.|+++. .+|...+++++.++++.+.+++|+.+|+|++++|||+++.++..+ ....+
T Consensus 458 ~~~~~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e 536 (903)
T PRK15122 458 VEDAQGQHLLICKGAVEEMLAVATHVR-DGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADE 536 (903)
T ss_pred EEcCCCcEEEEECCcHHHHHHhchhhh-cCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccccccc
Confidence 887677788999999999999999765 467778999999999999999999999999999999886542211 12246
Q ss_pred CceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCC
Q 003189 647 EGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPK 726 (840)
Q Consensus 647 ~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~ 726 (840)
++++|+|+++|+||+||+++++|++|+++||+|+|+|||++.||.++|+++||.. +.+++|.+++.++++++.+.+++
T Consensus 537 ~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~~~~el~~~v~~ 614 (903)
T PRK15122 537 RDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAMDDAALAREVEE 614 (903)
T ss_pred cCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhCCHHHHHHHhhh
Confidence 7899999999999999999999999999999999999999999999999999953 46899999999999999999999
Q ss_pred ceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHH
Q 003189 727 IQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWG 806 (840)
Q Consensus 727 ~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~g 806 (840)
..||||++|+||+++|+.||++ |++|+|||||+||+|||++|||||||| +|+|+||++||+||+||||++|++++++|
T Consensus 615 ~~VfAr~sPe~K~~iV~~Lq~~-G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~~g 692 (903)
T PRK15122 615 RTVFAKLTPLQKSRVLKALQAN-GHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKG 692 (903)
T ss_pred CCEEEEeCHHHHHHHHHHHHhC-CCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHHHHH
Confidence 9999999999999999999999 999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 003189 807 RSVYINIQKFVQFQLTVNVVALIVNFSSACLT 838 (840)
Q Consensus 807 R~~~~~i~k~i~f~l~~N~~~l~~~~~~~~~~ 838 (840)
|++|+||+|+++|+++.|+..++..+++.++.
T Consensus 693 R~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~ 724 (903)
T PRK15122 693 RETFGNIIKYLNMTASSNFGNVFSVLVASAFI 724 (903)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 99999999999999999998888777766553
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-116 Score=1060.14 Aligned_cols=653 Identities=27% Similarity=0.384 Sum_probs=575.1
Q ss_pred CHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCCCC
Q 003189 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKG 199 (840)
Q Consensus 120 gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~ 199 (840)
.++.+.+.|+++. .||++++ +.+|++.||+|+++.++.+++|+.++++|+++++++|+++++++++.+ .
T Consensus 19 ~~~~~~~~l~~~~-~GLs~~e--v~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~--------~ 87 (867)
T TIGR01524 19 GKETLLRKLGVHE-TGLTNVE--VTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD--------D 87 (867)
T ss_pred CHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh--------h
Confidence 5788888999886 6999877 999999999999999988999999999999999999999999998775 5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEE------CCeEEEEeccCCCCCcEEEecCCCccccc
Q 003189 200 AHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVAR------NGFRRKISIYDLLPGDIVHLCMGDQVPAD 273 (840)
Q Consensus 200 ~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R------dG~~~~I~~~dLvvGDIV~l~~Gd~VPaD 273 (840)
|++++.|++.+++..++..+.+++.++..+.|.+.. +..++|+| ||++++|+++||||||+|.|++||+||||
T Consensus 88 ~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~-~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaD 166 (867)
T TIGR01524 88 LEATVIIALMVLASGLLGFIQESRAERAAYALKNMV-KNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPAD 166 (867)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEccc
Confidence 889999998888888888899998888888888754 45899999 99999999999999999999999999999
Q ss_pred EEEEeecceEEecccccCCCCccccCCCC------------CeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCC
Q 003189 274 GLFVSGFSVLINESSLTGESEPVNVNALN------------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGD 341 (840)
Q Consensus 274 gvll~g~~l~VDES~LTGES~pv~k~~~~------------~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~ 341 (840)
|++++|+++.||||+|||||.|+.|..++ +++|+||.|.+|+++++|++||.+|++|+|.+++.+ ..
T Consensus 167 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~-~~ 245 (867)
T TIGR01524 167 ARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATE-RR 245 (867)
T ss_pred EEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhC-CC
Confidence 99999988999999999999999997653 479999999999999999999999999999999988 66
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHH
Q 003189 342 DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVT 421 (840)
Q Consensus 342 ~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~ 421 (840)
+++|+|++++++++++.++++++++++|+++.. . .+ ++.+.+.+++++++++||||||++++
T Consensus 246 ~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~---~----~~-----------~~~~~~~~al~l~v~~iP~~Lp~~vt 307 (867)
T TIGR01524 246 GQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGL---M----KG-----------DWLEAFLFALAVAVGLTPEMLPMIVS 307 (867)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHheehHHH---h----cC-----------CHHHHHHHHHHHHHHhCcchHHHHHH
Confidence 679999999999999999888887776655421 0 00 24577889999999999999999999
Q ss_pred HHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHH
Q 003189 422 LSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLL 501 (840)
Q Consensus 422 l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 501 (840)
++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..... ...+++
T Consensus 308 ~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~------------------~~~~~l 369 (867)
T TIGR01524 308 SNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGE------------------TSERVL 369 (867)
T ss_pred HHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCC------------------CHHHHH
Confidence 99999999999999999999999999999999999999999999999987522110 011222
Q ss_pred HHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEc
Q 003189 502 LQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCK 581 (840)
Q Consensus 502 ~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~K 581 (840)
.. ++.|+.. . ..++||+|.|+++++.... ....+..++.++.+||+|++|+|+++++.+++.+++++|
T Consensus 370 ~~-a~l~~~~--~-------~~~~~p~~~Al~~~~~~~~--~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~K 437 (867)
T TIGR01524 370 KM-AWLNSYF--Q-------TGWKNVLDHAVLAKLDESA--ARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICK 437 (867)
T ss_pred HH-HHHhCCC--C-------CCCCChHHHHHHHHHHhhc--hhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEe
Confidence 22 2333221 1 1257999999999986532 223445678889999999999999998866666889999
Q ss_pred CchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCC
Q 003189 582 GASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPM 661 (840)
Q Consensus 582 Ga~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~l 661 (840)
|+||.+++.|+++. .+|...+++++.++++++.+++|+++|+|++++|||+++.++.......+++++|+|+++|+||+
T Consensus 438 Ga~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~ 516 (867)
T TIGR01524 438 GAVEEMLTVCTHKR-FGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPP 516 (867)
T ss_pred CcHHHHHHhchhhh-cCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCC
Confidence 99999999999774 46777899999889999999999999999999999988654321111236789999999999999
Q ss_pred CcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHH
Q 003189 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTL 741 (840)
Q Consensus 662 R~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~ 741 (840)
||+++++|++|+++||+|+|+|||+..||.++|+++||.. +.+++|.+++.++++++.+.++++.||||++|+||.++
T Consensus 517 R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~i 594 (867)
T TIGR01524 517 KESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRI 594 (867)
T ss_pred chhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHH
Confidence 9999999999999999999999999999999999999963 46899999999999999999999999999999999999
Q ss_pred HHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 742 VKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQL 821 (840)
Q Consensus 742 V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l 821 (840)
|+.||++ |++|+|||||+||+|||++|||||||| +|+|+||++||+||+||||++|++++++||++|+||+||++|++
T Consensus 595 V~~lq~~-G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~l 672 (867)
T TIGR01524 595 IGLLKKA-GHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTA 672 (867)
T ss_pred HHHHHhC-CCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999 999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhc
Q 003189 822 TVNVVALIVNFSSACLT 838 (840)
Q Consensus 822 ~~N~~~l~~~~~~~~~~ 838 (840)
+.|+..++..++++++.
T Consensus 673 s~n~~~~~~~~~~~~~~ 689 (867)
T TIGR01524 673 SSNFGNVFSVLVASAFI 689 (867)
T ss_pred hhhHHHHHHHHHHHHHh
Confidence 99999888877776653
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-115 Score=1059.17 Aligned_cols=673 Identities=33% Similarity=0.530 Sum_probs=591.0
Q ss_pred cCHHHHHHHhCCCcCCCCC-ccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHH-hhhHHHHHHHHHHHHHHhhhcccCC
Q 003189 119 GGVEGIAEKLSTSITDGIS-TSEHLLNRRKEIYGINKFTESPARGFWVYVWEAL-HDMTLMILAVCALVSLVVGIATEGW 196 (840)
Q Consensus 119 ~gv~~l~~~l~~~~~~Gl~-~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l-~~~~~~il~i~a~is~~~~~~~~~~ 196 (840)
..++++++.|+++...||+ +++ +++|++.||+|+++.++.+++|+.++++| +++++++|+++++++++++
T Consensus 7 ~~~~~v~~~l~t~~~~GLs~~~e--v~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g------ 78 (884)
T TIGR01522 7 LSVEETCSKLQTDLQNGLNSSQE--ASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG------ 78 (884)
T ss_pred CCHHHHHHHhCcCcccCCCcHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc------
Confidence 3688999999999999999 555 99999999999999999999999999999 9999999999999998876
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEECCeEEEEeccCCCCCcEEEecCCCcccccEEE
Q 003189 197 PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLF 276 (840)
Q Consensus 197 ~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvl 276 (840)
.|.|++.|+++++++++++.+.+|+.++..++|.+. .+.+++|+|||++++|+++||||||+|.|++||+|||||++
T Consensus 79 --~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l-~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~i 155 (884)
T TIGR01522 79 --NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKL-VPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRI 155 (884)
T ss_pred --chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEE
Confidence 588999998888889999999999999999988874 45689999999999999999999999999999999999999
Q ss_pred EeecceEEecccccCCCCccccCCCC-------------CeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCCC
Q 003189 277 VSGFSVLINESSLTGESEPVNVNALN-------------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDE 343 (840)
Q Consensus 277 l~g~~l~VDES~LTGES~pv~k~~~~-------------~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~ 343 (840)
++|+++.||||+|||||.|+.|.+++ +++|+||.|.+|+++++|++||.+|++|+|.+++++....+
T Consensus 156 i~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~k 235 (884)
T TIGR01522 156 VEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPK 235 (884)
T ss_pred EEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCC
Confidence 99987899999999999999997542 58999999999999999999999999999999999988889
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHH
Q 003189 344 TPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLS 423 (840)
Q Consensus 344 tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~ 423 (840)
+|+|+.+++++.++++++++++++++++. ++. + . .+...+.+++++++++||||||+++|++
T Consensus 236 t~lq~~l~~l~~~~~~~~~~~~~~~~~~~---~~~-----~-------~---~~~~~~~~~v~llv~aiP~~Lp~~vt~~ 297 (884)
T TIGR01522 236 TPLQKSMDLLGKQLSLVSFGVIGVICLVG---WFQ-----G-------K---DWLEMFTISVSLAVAAIPEGLPIIVTVT 297 (884)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHh-----c-------C---CHHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 99999999999999887766555444432 111 0 0 3567888999999999999999999999
Q ss_pred HHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeee-cCCCCC---------CCCCCCC
Q 003189 424 LAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV-DNSKGT---------PAFGSSI 493 (840)
Q Consensus 424 l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~-~~~~~~---------~~~~~~~ 493 (840)
+++++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..... +..... .......
T Consensus 298 l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (884)
T TIGR01522 298 LALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFY 377 (884)
T ss_pred HHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCccccccccccccc
Confidence 999999999999999999999999999999999999999999999999876543210 000000 0000111
Q ss_pred ChhHHHHHHHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeC-
Q 003189 494 PASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP- 572 (840)
Q Consensus 494 ~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~- 572 (840)
++...+++. ..+.|+++..... ..+..|||+|.|+++++...+.+ ..+..++.++.+||+|.+|+|+++++..
T Consensus 378 ~~~~~~~l~-~~~l~~~~~~~~~---~~~~~g~p~e~All~~~~~~~~~--~~~~~~~~~~~~pF~s~~k~m~v~~~~~~ 451 (884)
T TIGR01522 378 TVAVSRILE-AGNLCNNAKFRNE---ADTLLGNPTDVALIELLMKFGLD--DLRETYIRVAEVPFSSERKWMAVKCVHRQ 451 (884)
T ss_pred CHHHHHHHH-HHhhhCCCeecCC---CCCcCCChHHHHHHHHHHHcCcH--hHHhhCcEEeEeCCCCCCCeEEEEEEEcC
Confidence 223334443 3344444443322 12346899999999999877653 4455678899999999999999988753
Q ss_pred CCcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeee
Q 003189 573 EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCI 652 (840)
Q Consensus 573 ~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~l 652 (840)
++++++++||+||.|+..|++++..+|...+++++.++.+.+.+++|+++|+|++++||+++ +.+++|+
T Consensus 452 ~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~-----------~~~l~~l 520 (884)
T TIGR01522 452 DRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE-----------KGQLTFL 520 (884)
T ss_pred CCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC-----------CCCeEEE
Confidence 56789999999999999999998878888899999999999999999999999999999864 2579999
Q ss_pred eeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEe
Q 003189 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR 732 (840)
Q Consensus 653 g~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar 732 (840)
|+++|+||+||+++++|++|+++|++++|+|||+..||.++|+++||......+++|.+++.++++++.+.+++..||||
T Consensus 521 Gli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar 600 (884)
T TIGR01522 521 GLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFAR 600 (884)
T ss_pred EEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEE
Confidence 99999999999999999999999999999999999999999999999877778899999999999999999999999999
Q ss_pred cCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHH
Q 003189 733 SSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYIN 812 (840)
Q Consensus 733 ~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~ 812 (840)
++|+||..+|+.||+. |++|+|+|||.||+|||++||||||||.+|+++++++||++|+||||++|++++++||++|+|
T Consensus 601 ~~P~~K~~iv~~lq~~-g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~n 679 (884)
T TIGR01522 601 ASPEHKMKIVKALQKR-GDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNN 679 (884)
T ss_pred CCHHHHHHHHHHHHHC-CCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999998 999999999999999999999999999789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhc
Q 003189 813 IQKFVQFQLTVNVVALIVNFSSACLT 838 (840)
Q Consensus 813 i~k~i~f~l~~N~~~l~~~~~~~~~~ 838 (840)
|+||++|+++.|+..+.+.+++.++.
T Consensus 680 i~k~i~~~l~~ni~~~~~~~~~~~~~ 705 (884)
T TIGR01522 680 IKNFITFQLSTSVAALSLIALATLMG 705 (884)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHc
Confidence 99999999999999998888777664
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-112 Score=1013.87 Aligned_cols=617 Identities=26% Similarity=0.409 Sum_probs=541.6
Q ss_pred CCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHH
Q 003189 135 GISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVV 214 (840)
Q Consensus 135 Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv~ 214 (840)
||++++ +++|+++||+|+++. +.+++|+.++++|++++.++|+++++++++++ .|+|++.|++.+++..
T Consensus 1 GLs~~e--a~~r~~~~G~N~~~~-~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~--------~~~~~~~i~~~~~i~~ 69 (755)
T TIGR01647 1 GLTSAE--AKKRLAKYGPNELPE-KKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE--------NWVDFVIILGLLLLNA 69 (755)
T ss_pred CcCHHH--HHHHHHhcCCCCCCC-CCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc--------chhhhhhhhhhhHHHH
Confidence 788876 999999999999987 45677899999999999999999999999876 4889998888888888
Q ss_pred HHHHHHHHHHHHHHhHhHhhhcCceEEEEECCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecccccCCCC
Q 003189 215 FVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESE 294 (840)
Q Consensus 215 ~v~~~~~~~~~~~~~~l~~~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~ 294 (840)
.+..+.+++.++..++|.+. .+.+++|+|||++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.
T Consensus 70 ~i~~~qe~~a~~~~~~L~~~-~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~ 148 (755)
T TIGR01647 70 TIGFIEENKAGNAVEALKQS-LAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESL 148 (755)
T ss_pred HHHHHHHHHHHHHHHHHHhh-CCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCcc
Confidence 88888888888888888764 45689999999999999999999999999999999999999999878999999999999
Q ss_pred ccccCCCCCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 295 PVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQ 374 (840)
Q Consensus 295 pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~ 374 (840)
|+.|..++ .+|+||.|.+|+++++|++||.+|++|+|.+++.+.+.+++|+|+.+++++.++.++.+++++++|++++.
T Consensus 149 PV~K~~~~-~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~ 227 (755)
T TIGR01647 149 PVTKKTGD-IAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFF 227 (755)
T ss_pred ceEeccCC-eeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998765 69999999999999999999999999999999999888889999999999999999888888777766532
Q ss_pred hHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEE
Q 003189 375 GLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSIC 454 (840)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~ 454 (840)
.+ + .++...+.+++++++++|||+||+++|++++.++++|+|+|+++|+++++|+||++|+||
T Consensus 228 ~~-------~----------~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~ 290 (755)
T TIGR01647 228 GR-------G----------ESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILC 290 (755)
T ss_pred Hc-------C----------CCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEE
Confidence 10 0 035678889999999999999999999999999999999999999999999999999999
Q ss_pred ecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceeEcCChhhHHHHH
Q 003189 455 SDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILE 534 (840)
Q Consensus 455 ~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~ 534 (840)
||||||||+|+|+|.+++..+.. .+++ +++..+..++ . +.++||+|.|+++
T Consensus 291 ~DKTGTLT~~~~~v~~~~~~~~~---------------~~~~--~~l~~a~~~~-~-----------~~~~~pi~~Ai~~ 341 (755)
T TIGR01647 291 SDKTGTLTLNKLSIDEILPFFNG---------------FDKD--DVLLYAALAS-R-----------EEDQDAIDTAVLG 341 (755)
T ss_pred ecCCCccccCceEEEEEEecCCC---------------CCHH--HHHHHHHHhC-C-----------CCCCChHHHHHHH
Confidence 99999999999999998864321 0111 2232232222 1 1267999999999
Q ss_pred HHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeCC-CcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHH
Q 003189 535 FGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPE-GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLN 613 (840)
Q Consensus 535 ~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~-~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~ 613 (840)
++.+.+ ..+..+++++.+||++.+|+|+++++.++ ++...++||+||.+++.|++. ++.+++++
T Consensus 342 ~~~~~~----~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-----------~~~~~~~~ 406 (755)
T TIGR01647 342 SAKDLK----EARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-----------KEIEEKVE 406 (755)
T ss_pred HHHHhH----HHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-----------HHHHHHHH
Confidence 886532 33456788899999999999999887654 666788999999999999742 34556788
Q ss_pred HHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHH
Q 003189 614 ETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAI 693 (840)
Q Consensus 614 ~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~i 693 (840)
+.+++++.+|+|++++||++ .+++++|+|+++|+||+||+++++|++|+++||+|+|+|||++.||.++
T Consensus 407 ~~~~~~~~~G~rvl~vA~~~-----------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~I 475 (755)
T TIGR01647 407 EKVDELASRGYRALGVARTD-----------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKET 475 (755)
T ss_pred HHHHHHHhCCCEEEEEEEEc-----------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHH
Confidence 88999999999999999973 1368999999999999999999999999999999999999999999999
Q ss_pred HHHcCCccC---CCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCC
Q 003189 694 ARECGILTD---NGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770 (840)
Q Consensus 694 A~~~Gi~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Ad 770 (840)
|+++||... ...+.+|.+...++++++.+.+.++.||||++|+||+++|+.||++ |++|+|+|||+||+|||++||
T Consensus 476 A~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~-G~~VamvGDGvNDapAL~~Ad 554 (755)
T TIGR01647 476 ARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKR-GHLVGMTGDGVNDAPALKKAD 554 (755)
T ss_pred HHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhc-CCEEEEEcCCcccHHHHHhCC
Confidence 999999652 2234456666788899999999999999999999999999999999 999999999999999999999
Q ss_pred ccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 003189 771 IGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT 838 (840)
Q Consensus 771 vgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~~~~~ 838 (840)
|||||| +|+|+||++||+||+||||++|++++++||++|+||+||++|+++.|+..+++.+++.++.
T Consensus 555 VGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~ 621 (755)
T TIGR01647 555 VGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILIL 621 (755)
T ss_pred eeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Confidence 999999 8999999999999999999999999999999999999999999999999887777666543
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-108 Score=1006.56 Aligned_cols=659 Identities=34% Similarity=0.495 Sum_probs=566.7
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHhhhcccCC--CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEE
Q 003189 167 VWEALHDMTLMILAVCALVSLVVGIATEGW--PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVAR 244 (840)
Q Consensus 167 ~~~~l~~~~~~il~i~a~is~~~~~~~~~~--~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R 244 (840)
++++|+++++++|++++++|+++++..++. ...|+|++.|++.+++...++.+.+++.++..++|.+ ..+.+++|+|
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~-~~~~~~~ViR 79 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKE-YESEHAKVLR 79 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCceEEEE
Confidence 478999999999999999999998765333 2579999999999999999999999999999999987 4566899999
Q ss_pred CCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecccccCCCCccccCCC------------CCeEEeccEEe
Q 003189 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL------------NPFLLSGTKVQ 312 (840)
Q Consensus 245 dG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv~k~~~------------~~~l~sGt~v~ 312 (840)
||++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.|+.|.++ ++++|+||.|.
T Consensus 80 dg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~ 159 (917)
T TIGR01116 80 DGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVV 159 (917)
T ss_pred CCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEe
Confidence 999999999999999999999999999999999998899999999999999999653 27899999999
Q ss_pred eceEEEEEEEEcccchHHHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCc
Q 003189 313 NGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGD 392 (840)
Q Consensus 313 ~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~ 392 (840)
+|+++++|++||.+|++|+|.+++.....++||+|+++++++.++.++.+++++++|++++..+... ..+ ..
T Consensus 160 ~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~--~~~------~~ 231 (917)
T TIGR01116 160 AGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDP--ALG------GG 231 (917)
T ss_pred cceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--ccc------ch
Confidence 9999999999999999999999999888889999999999999999888887777776554322110 000 01
Q ss_pred ChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEE
Q 003189 393 DALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKAC 472 (840)
Q Consensus 393 ~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~ 472 (840)
....+..++..++++++++|||+||+++++++++++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++
T Consensus 232 ~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~ 311 (917)
T TIGR01116 232 WIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVV 311 (917)
T ss_pred hHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEE
Confidence 11245667778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCee------eeecCCCCCCCC---C-----CCCChhHHHHHHHHHHhcCCceEEecC-CCceeEcCChhhHHHHHHHH
Q 003189 473 ICEEI------KEVDNSKGTPAF---G-----SSIPASASKLLLQSIFNNTGGEVVIGE-GNKTEILGTPTETAILEFGL 537 (840)
Q Consensus 473 ~~~~~------~~~~~~~~~~~~---~-----~~~~~~~~~~l~~~i~~~~~~~~~~~~-~~~~~~~g~p~e~All~~~~ 537 (840)
..+.. +...+..+.+.. . ....+.....+......|+++.+..++ ++..+..|+|+|.||++++.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~ 391 (917)
T TIGR01116 312 ALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVE 391 (917)
T ss_pred ecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHH
Confidence 86532 111111111100 0 000122344455666677776665432 22344579999999999998
Q ss_pred HcCCChHH----------------HhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCce
Q 003189 538 LLGGDFQA----------------ERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEV 601 (840)
Q Consensus 538 ~~~~~~~~----------------~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~ 601 (840)
+.|.+... .++.+++++.+||+|+||||+++++.+ +++.+++|||||.|++.|++++..+|..
T Consensus 392 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~-~~~~~~~KGApe~il~~c~~~~~~~g~~ 470 (917)
T TIGR01116 392 KMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPS-TGNKLFVKGAPEGVLERCTHILNGDGRA 470 (917)
T ss_pred HcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeC-CcEEEEEcCChHHHHHhccceecCCCCe
Confidence 88765432 245677999999999999999998864 6688999999999999999988877888
Q ss_pred eeCCHHHHHHHHHHHHHHHH-cccceeEEEEEEcCCCCC-------CCCCCCCCceeeeeeecccCCCCcchHHHHHHHH
Q 003189 602 VPLNEAAVNHLNETIEKFAS-EALRTLCLACMEIGNEFS-------ADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICR 673 (840)
Q Consensus 602 ~~l~~~~~~~~~~~~~~~~~-~glr~l~~A~~~~~~~~~-------~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~ 673 (840)
.|++++.++++.+.+++|++ +|+||+++|||+++.+.. ...+..|++++|+|+++++||+||+++++|+.|+
T Consensus 471 ~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~ 550 (917)
T TIGR01116 471 VPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCR 550 (917)
T ss_pred eeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHH
Confidence 99999999999999999999 999999999999864311 1113457899999999999999999999999999
Q ss_pred hCCCEEEEEcCCCHHHHHHHHHHcCCccCCC----ccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhC
Q 003189 674 SAGITVRMVTGDNINTAKAIARECGILTDNG----IAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTL 749 (840)
Q Consensus 674 ~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~ 749 (840)
++||+++|+|||+..||.++|+++||..++. .+++|+++..++++++...+++..||||++|+||.++|+.+|+.
T Consensus 551 ~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~- 629 (917)
T TIGR01116 551 TAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQ- 629 (917)
T ss_pred HCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhc-
Confidence 9999999999999999999999999976543 47899999999999999999999999999999999999999988
Q ss_pred CCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 750 GEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALI 829 (840)
Q Consensus 750 g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~ 829 (840)
|++|+|+|||.||+|||++|||||||| +|++++|++||++++||||++|+++++|||++|+||+|+++|+++.|+..++
T Consensus 630 g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~ 708 (917)
T TIGR01116 630 GEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVV 708 (917)
T ss_pred CCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 999999999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhh
Q 003189 830 VNFSSACL 837 (840)
Q Consensus 830 ~~~~~~~~ 837 (840)
+.+++.++
T Consensus 709 ~~~~~~~~ 716 (917)
T TIGR01116 709 CIFLTAAL 716 (917)
T ss_pred HHHHHHHH
Confidence 98887665
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-104 Score=980.85 Aligned_cols=642 Identities=23% Similarity=0.332 Sum_probs=518.9
Q ss_pred CCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHH
Q 003189 133 TDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILL 212 (840)
Q Consensus 133 ~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~ill 212 (840)
..||+.++ +.+|++.||.|.++.+ .++||+++++++.+|++++++++.++++.. +.|++++.|++.+++
T Consensus 137 ~~GLs~~e--~~~r~~~yG~N~i~~~-~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~--------~~~~~~~~i~~i~~~ 205 (1054)
T TIGR01657 137 SNGLTTGD--IAQRKAKYGKNEIEIP-VPSFLELLKEEVLHPFYVFQVFSVILWLLD--------EYYYYSLCIVFMSST 205 (1054)
T ss_pred ccCCCHHH--HHHHHHhcCCCeeecC-CCCHHHHHHHHHhchHHHHHHHHHHHHHhh--------hhHHHHHHHHHHHHH
Confidence 46998876 9999999999999875 589999999999999998888876665532 257888888777666
Q ss_pred HHHHHHHHHHHHHHHHhHhHhhhcCceEEEEECCeEEEEeccCCCCCcEEEec--CCCcccccEEEEeecceEEeccccc
Q 003189 213 VVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLC--MGDQVPADGLFVSGFSVLINESSLT 290 (840)
Q Consensus 213 v~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~--~Gd~VPaDgvll~g~~l~VDES~LT 290 (840)
...++...+++..++.+++. ..+..++|+|||++++|+++||||||+|.|+ +||+|||||+|++|+ +.||||+||
T Consensus 206 ~~~~~~~~~~k~~~~L~~~~--~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LT 282 (1054)
T TIGR01657 206 SISLSVYQIRKQMQRLRDMV--HKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLT 282 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHhh--cCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEeccccc
Confidence 66555555554444444432 2356899999999999999999999999999 999999999999995 899999999
Q ss_pred CCCCccccCCC-----------------CCeEEeccEEee-------ceEEEEEEEEcccchHHHHHHhhcCCCCCCChH
Q 003189 291 GESEPVNVNAL-----------------NPFLLSGTKVQN-------GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPL 346 (840)
Q Consensus 291 GES~pv~k~~~-----------------~~~l~sGt~v~~-------G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tpl 346 (840)
|||.|+.|.+. .+++|+||.|.+ |.++++|++||.+|..|++.+++......++++
T Consensus 283 GES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~ 362 (1054)
T TIGR01657 283 GESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKF 362 (1054)
T ss_pred CCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCch
Confidence 99999999641 347999999985 889999999999999999999998888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 003189 347 QVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAF 426 (840)
Q Consensus 347 q~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~ 426 (840)
++.+.++...+.. ++++.+++++..++.. + .++...+..++++++++|||+||+++++++++
T Consensus 363 ~~~~~~~~~~l~~----~a~i~~i~~~~~~~~~----~----------~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~ 424 (1054)
T TIGR01657 363 YKDSFKFILFLAV----LALIGFIYTIIELIKD----G----------RPLGKIILRSLDIITIVVPPALPAELSIGINN 424 (1054)
T ss_pred HHHHHHHHHHHHH----HHHHHHHHHHHHHHHc----C----------CcHHHHHHHHHHHHHhhcCchHHHHHHHHHHH
Confidence 8887766555443 3333333322221110 1 13567888899999999999999999999999
Q ss_pred HHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHH
Q 003189 427 AMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIF 506 (840)
Q Consensus 427 ~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 506 (840)
++++|+|+|++||++.++|++|++|++|||||||||+|+|+|.+++..+........ ...........+...++
T Consensus 425 ~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~------~~~~~~~~~~~~~~~~a 498 (1054)
T TIGR01657 425 SLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKI------VTEDSSLKPSITHKALA 498 (1054)
T ss_pred HHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccc------cccccccCchHHHHHHH
Confidence 999999999999999999999999999999999999999999999875432110000 00000011223445566
Q ss_pred hcCCceEEecCCCceeEcCChhhHHHHHHHHHc-CC--C--hHH----------HhhccceEEEecCCCCCceEEEEEEe
Q 003189 507 NNTGGEVVIGEGNKTEILGTPTETAILEFGLLL-GG--D--FQA----------ERQASKIVKVEPFNSVKKQMGVVIEL 571 (840)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~-~~--~--~~~----------~~~~~~i~~~~pF~s~~k~~~vv~~~ 571 (840)
.||+..... + +..|||+|.|+++++... .. + ... ....+++++.+||+|++|||+++++.
T Consensus 499 ~C~~~~~~~---~--~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~ 573 (1054)
T TIGR01657 499 TCHSLTKLE---G--KLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVST 573 (1054)
T ss_pred hCCeeEEEC---C--EEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEE
Confidence 676654321 2 568999999999986311 00 0 000 02467889999999999999999987
Q ss_pred CC-CcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCC-----CCCCCCC
Q 003189 572 PE-GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF-----SADAPIP 645 (840)
Q Consensus 572 ~~-~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~-----~~~~~~~ 645 (840)
++ +.+++++|||||.|++.|+.. ..++.+.+.+++|+++|+||+++|||++++.. ..+++..
T Consensus 574 ~~~~~~~~~~KGApE~Il~~c~~~------------~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~ 641 (1054)
T TIGR01657 574 NDERSPDAFVKGAPETIQSLCSPE------------TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAV 641 (1054)
T ss_pred cCCCeEEEEEECCHHHHHHHcCCc------------CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHH
Confidence 54 467899999999999999841 12356788899999999999999999987421 1122456
Q ss_pred CCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC---------------------
Q 003189 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--------------------- 704 (840)
Q Consensus 646 ~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~--------------------- 704 (840)
|+|++|+|+++|+||+||+++++|++|+++||+++|+||||+.||.++|++|||..++.
T Consensus 642 E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~ 721 (1054)
T TIGR01657 642 ESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFE 721 (1054)
T ss_pred hcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEE
Confidence 88999999999999999999999999999999999999999999999999999975331
Q ss_pred --------------------------------ccccChhhhc---CCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhC
Q 003189 705 --------------------------------IAIEGPEFRE---KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTL 749 (840)
Q Consensus 705 --------------------------------~~~~g~~~~~---~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~ 749 (840)
.+++|+++.. +.++++.+.+.++.||||++|+||.++|+.||+.
T Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~- 800 (1054)
T TIGR01657 722 VIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKL- 800 (1054)
T ss_pred ecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhC-
Confidence 4677877765 4667889999999999999999999999999998
Q ss_pred CCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 750 GEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALI 829 (840)
Q Consensus 750 g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~ 829 (840)
|++|+|||||+||+||||+|||||||| .+ |+ ..+||+++++|||++|+++|++||+++.|+++.++|.+.||++..+
T Consensus 801 g~~V~m~GDG~ND~~ALK~AdVGIam~-~~-da-s~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~ 877 (1054)
T TIGR01657 801 DYTVGMCGDGANDCGALKQADVGISLS-EA-EA-SVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFY 877 (1054)
T ss_pred CCeEEEEeCChHHHHHHHhcCcceeec-cc-cc-eeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998 33 54 4889999999999999999999999999999999999999998755
Q ss_pred HHHH
Q 003189 830 VNFS 833 (840)
Q Consensus 830 ~~~~ 833 (840)
..++
T Consensus 878 ~~~~ 881 (1054)
T TIGR01657 878 SVSI 881 (1054)
T ss_pred HHHH
Confidence 5443
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-104 Score=882.16 Aligned_cols=695 Identities=32% Similarity=0.464 Sum_probs=595.0
Q ss_pred HhcCHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhccc--
Q 003189 117 VHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATE-- 194 (840)
Q Consensus 117 ~~~gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~-- 194 (840)
+...++.|++.+.+++..||+... +.+++.+-|+|.+++|+..|-|..+.+++++..-++++++|+++++......
T Consensus 40 H~~~~~eL~~r~~t~~~~Glt~~~--A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~ 117 (1019)
T KOG0203|consen 40 HKLSVDELCERYGTSVSQGLTSQE--AAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQAST 117 (1019)
T ss_pred ccCCHHHHHHHhcCChhhcccHHH--HHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhccc
Confidence 445799999999999999999977 8999999999999999999999999999999999999999998875443211
Q ss_pred --C-CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHh---hhcCceEEEEECCeEEEEeccCCCCCcEEEecCCC
Q 003189 195 --G-WPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR---EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGD 268 (840)
Q Consensus 195 --~-~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~---~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd 268 (840)
. .....|-+. ++..+++++.+-.|.|+.+-.+... ...+..++|+|||+...+...||||||+|.++-||
T Consensus 118 ~~~~~~~nly~gi----iL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~Gd 193 (1019)
T KOG0203|consen 118 EDDPSDDNLYLGI----VLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGD 193 (1019)
T ss_pred CCCCCCcceEEEE----EEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCC
Confidence 1 122334333 2233444555556666666555444 34567899999999999999999999999999999
Q ss_pred cccccEEEEeecceEEecccccCCCCccccCC---------CCCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCC
Q 003189 269 QVPADGLFVSGFSVLINESSLTGESEPVNVNA---------LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG 339 (840)
Q Consensus 269 ~VPaDgvll~g~~l~VDES~LTGES~pv~k~~---------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~ 339 (840)
+||||.+++++..+++|+|+|||||+|.+.++ ..++-|.+|.+++|.++++|.+||.+|.+|+|..+...-
T Consensus 194 rVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~ 273 (1019)
T KOG0203|consen 194 RVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGL 273 (1019)
T ss_pred cccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccC
Confidence 99999999999999999999999999998752 245689999999999999999999999999999998887
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHH
Q 003189 340 GDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLA 419 (840)
Q Consensus 340 ~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lpla 419 (840)
+..++|++..++++..++..+++++++..|++-++- + ..++.++.+.+.++|+.+|+|||..
T Consensus 274 ~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~--------g----------y~~l~avv~~i~iivAnvPeGL~~t 335 (1019)
T KOG0203|consen 274 EDGKTPIAKEIEHFIHIITGVAIFLGISFFILALIL--------G----------YEWLRAVVFLIGIIVANVPEGLLAT 335 (1019)
T ss_pred CCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhh--------c----------chhHHHhhhhheeEEecCcCCccce
Confidence 888999999999999999888888887777543321 1 1466777778899999999999999
Q ss_pred HHHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHH
Q 003189 420 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASK 499 (840)
Q Consensus 420 v~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (840)
+|.+++...++|++++++||++.+.|++|+.++||+|||||||+|+|+|.++|.++.....+.............+....
T Consensus 336 vTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~ 415 (1019)
T KOG0203|consen 336 VTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFI 415 (1019)
T ss_pred ehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHH
Confidence 99999999999999999999999999999999999999999999999999999998876544322211222222234455
Q ss_pred HHHHHHHhcCCceEEecCCC----ceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeCC--
Q 003189 500 LLLQSIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPE-- 573 (840)
Q Consensus 500 ~l~~~i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~-- 573 (840)
.+...++.|+.+.+..++.+ +....|++.|.||++|+...-.+....|+..+.+...||||.+|+.-.+.+..+
T Consensus 416 ~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~ 495 (1019)
T KOG0203|consen 416 ALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPS 495 (1019)
T ss_pred HHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCC
Confidence 56677788888887766554 445689999999999998776677888999999999999999999877776544
Q ss_pred -CcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCC--------CCCCCC
Q 003189 574 -GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF--------SADAPI 644 (840)
Q Consensus 574 -~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~--------~~~~~~ 644 (840)
..+.+.+|||||.++++|+.++ .+|+..|++++.++.+++...++...|-|+++|+++.++++. .+..+.
T Consensus 496 ~~~~~l~mKGape~il~~CSTi~-i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~ 574 (1019)
T KOG0203|consen 496 DPRFLLVMKGAPERILDRCSTIL-INGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNF 574 (1019)
T ss_pred CccceeeecCChHHHHhhcccee-ecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCC
Confidence 4677889999999999999876 578889999999999999999999999999999999887551 122356
Q ss_pred CCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC--------------------
Q 003189 645 PTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG-------------------- 704 (840)
Q Consensus 645 ~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~-------------------- 704 (840)
+..++.|+|++.+-||+|+.+++|+..||.|||+|+|+|||++.||+++|+..||..++.
T Consensus 575 p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~ 654 (1019)
T KOG0203|consen 575 PTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSR 654 (1019)
T ss_pred cchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCcc
Confidence 678999999999999999999999999999999999999999999999999999875432
Q ss_pred ----ccccChhhhcCCHHHHhhhcCCc--eEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCC
Q 003189 705 ----IAIEGPEFREKSDEELSKLIPKI--QVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIA 778 (840)
Q Consensus 705 ----~~~~g~~~~~~~~~~~~~~~~~~--~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~ 778 (840)
.|+.|.++..++++++++++.+- .||||.||+||+.+|+.+|++ |.+|+++|||+||+||||.||||||||++
T Consensus 655 ~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~-GaiVaVTGDGVNDsPALKKADIGVAMGia 733 (1019)
T KOG0203|consen 655 DAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGIA 733 (1019)
T ss_pred ccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhc-CcEEEEeCCCcCCChhhcccccceeeccc
Confidence 67899999999999999988332 499999999999999999999 99999999999999999999999999999
Q ss_pred CcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 003189 779 GTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACL 837 (840)
Q Consensus 779 g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~~~~ 837 (840)
|+|++|++||+||+||||++||..+++||-+|+|+||.|.|.|+.|+-.+..-+++.++
T Consensus 734 GSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~ 792 (1019)
T KOG0203|consen 734 GSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILF 792 (1019)
T ss_pred cchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999988776555443
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-96 Score=851.14 Aligned_cols=549 Identities=24% Similarity=0.357 Sum_probs=444.3
Q ss_pred HHhhhHHHHHHHHHHHHHHhhhccc--CC-CCCcchhHHHHHHHHHHHHHHHHHH----HHHHHHHhHhHhhhcCceEE-
Q 003189 170 ALHDMTLMILAVCALVSLVVGIATE--GW-PKGAHDGLGIVMSILLVVFVTATSD----YKQSLQFKDLDREKKKITVQ- 241 (840)
Q Consensus 170 ~l~~~~~~il~i~a~is~~~~~~~~--~~-~~~~~d~~~i~~~illv~~v~~~~~----~~~~~~~~~l~~~~~~~~v~- 241 (840)
.+++|..++++++++++++++.+.+ +. ...+++++.|++.+++.+++..+.+ ++.+++.+.|.+..++.+++
T Consensus 29 ~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~~ 108 (673)
T PRK14010 29 MIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARR 108 (673)
T ss_pred HHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEE
Confidence 5678899999999999998887532 11 1123567777777777777776664 34444455555544443565
Q ss_pred EEECCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecccccCCCCccccCCC---CCeEEeccEEeeceEEE
Q 003189 242 VARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL---NPFLLSGTKVQNGSCKM 318 (840)
Q Consensus 242 V~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv~k~~~---~~~l~sGt~v~~G~~~~ 318 (840)
|.|||++++|++++|+|||+|.+++||+|||||++++|+. .||||+|||||.|+.|..+ ++ +|+||.|.+|++++
T Consensus 109 v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d~~~-V~aGT~v~~G~~~i 186 (673)
T PRK14010 109 IKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDN-VIGGTSVASDWLEV 186 (673)
T ss_pred EEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCccCe-eecCceeecceEEE
Confidence 6799999999999999999999999999999999999975 9999999999999999877 66 99999999999999
Q ss_pred EEEEEcccchHHHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHH
Q 003189 319 LVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEIL 398 (840)
Q Consensus 319 ~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (840)
+|+++|.+|++|+|.+++++++.++||+|..+..+...+. +.++++++++..+.. +. .+.
T Consensus 187 ~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~-----ii~l~~~~~~~~~~~----------~~-----~~~ 246 (673)
T PRK14010 187 EITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLT-----IIFLVVILTMYPLAK----------FL-----NFN 246 (673)
T ss_pred EEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHh-----HHHHHHHHHHHHHHh----------hc-----cHH
Confidence 9999999999999999999999899999977665443322 222222222110000 00 122
Q ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeee
Q 003189 399 EFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIK 478 (840)
Q Consensus 399 ~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~ 478 (840)
..+.++++++|++|||+||.+++++++.++++|+|+|+++|+++++|+||++|+||||||||||+|++.++++...+..
T Consensus 247 ~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~~- 325 (673)
T PRK14010 247 LSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKSS- 325 (673)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCCc-
Confidence 3566788888899999999999999999999999999999999999999999999999999999988777765432110
Q ss_pred eecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecC
Q 003189 479 EVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPF 558 (840)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF 558 (840)
+..+++.. ...++.. +.||+++|+++++.+.+.+.... ..+.+||
T Consensus 326 -----------------~~~~ll~~-a~~~~~~------------s~~P~~~AIv~~a~~~~~~~~~~-----~~~~~pF 370 (673)
T PRK14010 326 -----------------SFERLVKA-AYESSIA------------DDTPEGRSIVKLAYKQHIDLPQE-----VGEYIPF 370 (673)
T ss_pred -----------------cHHHHHHH-HHHhcCC------------CCChHHHHHHHHHHHcCCCchhh-----hcceecc
Confidence 11223322 2222211 45999999999998776553221 1235899
Q ss_pred CCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCC
Q 003189 559 NSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF 638 (840)
Q Consensus 559 ~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~ 638 (840)
++++|+|++.+. + +.++||+++.+++.|+. +|...+. .+.+..++++++|+|+++++
T Consensus 371 ~~~~k~~gv~~~---g--~~i~kGa~~~il~~~~~----~g~~~~~------~~~~~~~~~a~~G~~~l~v~-------- 427 (673)
T PRK14010 371 TAETRMSGVKFT---T--REVYKGAPNSMVKRVKE----AGGHIPV------DLDALVKGVSKKGGTPLVVL-------- 427 (673)
T ss_pred ccccceeEEEEC---C--EEEEECCHHHHHHHhhh----cCCCCch------HHHHHHHHHHhCCCeEEEEE--------
Confidence 999999998742 2 24569999999999984 2222221 25566778999999999875
Q ss_pred CCCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHH
Q 003189 639 SADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDE 718 (840)
Q Consensus 639 ~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~ 718 (840)
.|++++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++||..
T Consensus 428 --------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~----------------- 482 (673)
T PRK14010 428 --------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR----------------- 482 (673)
T ss_pred --------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce-----------------
Confidence 3578999999999999999999999999999999999999999999999999974
Q ss_pred HHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchH
Q 003189 719 ELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST 798 (840)
Q Consensus 719 ~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~ 798 (840)
++||++|+||.++|+.+|++ |++|+|||||+||+|||++|||||||| +|+|+||++||+|++||||++
T Consensus 483 ----------v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ls~ 550 (673)
T PRK14010 483 ----------FVAECKPEDKINVIREEQAK-GHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTK 550 (673)
T ss_pred ----------EEcCCCHHHHHHHHHHHHhC-CCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCCHHH
Confidence 99999999999999999999 999999999999999999999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 003189 799 IVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSAC 836 (840)
Q Consensus 799 i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~~~ 836 (840)
|++++++||++|.|++|++.|.++.|+..++..+.+.|
T Consensus 551 Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~ 588 (673)
T PRK14010 551 LMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMF 588 (673)
T ss_pred HHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHH
Confidence 99999999999999999999999999987666555433
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-95 Score=839.45 Aligned_cols=554 Identities=25% Similarity=0.348 Sum_probs=450.6
Q ss_pred HHHhhhHHHHHHHHHHHHHHhhhccc---C---CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEE
Q 003189 169 EALHDMTLMILAVCALVSLVVGIATE---G---WPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQV 242 (840)
Q Consensus 169 ~~l~~~~~~il~i~a~is~~~~~~~~---~---~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V 242 (840)
.+|+++.++++++++++++++++... + +..+|..++.+++.+++..++.++.+++.+++++.|.+..++..++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 46789999999999999999886432 1 11233333444444444445555677777777888877555557999
Q ss_pred EECCe-EEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecccccCCCCccccCCCC--CeEEeccEEeeceEEEE
Q 003189 243 ARNGF-RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALN--PFLLSGTKVQNGSCKML 319 (840)
Q Consensus 243 ~RdG~-~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv~k~~~~--~~l~sGt~v~~G~~~~~ 319 (840)
+|||+ +++|++++|++||+|.+++||+|||||++++|. ..||||+|||||.|+.|..++ +.+|+||.|.+|+++++
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~-a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~ 187 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGV-ASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIR 187 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEcc-EEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEE
Confidence 99988 899999999999999999999999999999997 599999999999999998654 35999999999999999
Q ss_pred EEEEcccchHHHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHH
Q 003189 320 VTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILE 399 (840)
Q Consensus 320 V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (840)
|+++|.+|++|+|.+++++++.++||+|..++.+...+..+.+++.+..+.+ .++ .+. . .
T Consensus 188 Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~---~~~------------~g~---~--~ 247 (679)
T PRK01122 188 ITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPF---AAY------------SGG---A--L 247 (679)
T ss_pred EEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHH---HHH------------hCc---h--H
Confidence 9999999999999999999999999999888877665554333222211111 111 010 1 1
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeee
Q 003189 400 FFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE 479 (840)
Q Consensus 400 ~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~ 479 (840)
.+.++++++|++|||+|+.+++++...++++|+++|+++|+++++|+||++|+||||||||||+|+|++++++..+..
T Consensus 248 ~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~-- 325 (679)
T PRK01122 248 SITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV-- 325 (679)
T ss_pred HHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC--
Confidence 577889999999999999999999999999999999999999999999999999999999999999999988653221
Q ss_pred ecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHH-cCCChHHHhhccceEEEecC
Q 003189 480 VDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLL-LGGDFQAERQASKIVKVEPF 558 (840)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~-~~~~~~~~~~~~~i~~~~pF 558 (840)
++ +.+...++.++.+ +.||..+|+++++.. .+.+.. +..++..+.+||
T Consensus 326 --------------~~---~~ll~~a~~~s~~------------s~hP~~~AIv~~a~~~~~~~~~--~~~~~~~~~~pF 374 (679)
T PRK01122 326 --------------TE---EELADAAQLSSLA------------DETPEGRSIVVLAKQRFNLRER--DLQSLHATFVPF 374 (679)
T ss_pred --------------CH---HHHHHHHHHhcCC------------CCCchHHHHHHHHHhhcCCCch--hhccccceeEee
Confidence 11 1122333333221 458999999999876 343321 122456778999
Q ss_pred CCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCC
Q 003189 559 NSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF 638 (840)
Q Consensus 559 ~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~ 638 (840)
++.+++|++.+. + +.++||++|.+++.|+. +|... .+++++.+++++++|+|++++|+
T Consensus 375 ~s~~~~~gv~~~---g--~~~~kGa~e~il~~~~~----~g~~~------~~~~~~~~~~~a~~G~~~l~va~------- 432 (679)
T PRK01122 375 SAQTRMSGVDLD---G--REIRKGAVDAIRRYVES----NGGHF------PAELDAAVDEVARKGGTPLVVAE------- 432 (679)
T ss_pred cCcCceEEEEEC---C--EEEEECCHHHHHHHHHh----cCCcC------hHHHHHHHHHHHhCCCcEEEEEE-------
Confidence 999998887542 2 57899999999999963 22222 24567788899999999999983
Q ss_pred CCCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHH
Q 003189 639 SADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDE 718 (840)
Q Consensus 639 ~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~ 718 (840)
+++++|+++++||+|||++++|++||++||+++|+||||+.||.+||+++||.+
T Consensus 433 ---------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~----------------- 486 (679)
T PRK01122 433 ---------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD----------------- 486 (679)
T ss_pred ---------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE-----------------
Confidence 578999999999999999999999999999999999999999999999999964
Q ss_pred HHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchH
Q 003189 719 ELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST 798 (840)
Q Consensus 719 ~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~ 798 (840)
++||++|+||+++|+.+|++ |++|+|||||+||+|||++|||||||| +|+|+||++||+|++||||++
T Consensus 487 ----------v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~ 554 (679)
T PRK01122 487 ----------FLAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTK 554 (679)
T ss_pred ----------EEccCCHHHHHHHHHHHHHc-CCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHH
Confidence 99999999999999999999 999999999999999999999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 003189 799 IVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACL 837 (840)
Q Consensus 799 i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~~~~ 837 (840)
|+++++|||++.-.--..-.|++. |-++-.++++-++|
T Consensus 555 Iv~av~~GR~~~~tr~~~~~f~~~-n~~~~~~~i~p~~~ 592 (679)
T PRK01122 555 LIEVVEIGKQLLMTRGALTTFSIA-NDVAKYFAIIPAMF 592 (679)
T ss_pred HHHHHHHHHHHHhhhHhhhhhhHH-HHHHHHHHHHHHHH
Confidence 999999999999777777888877 66654444444443
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-95 Score=842.89 Aligned_cols=651 Identities=25% Similarity=0.326 Sum_probs=501.4
Q ss_pred hhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCC-ccccccccccCCcccChhhhhhhhccCCh---hHHHH
Q 003189 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSS-EYTVPEEVAASGFQICPDELGSIVEGHDI---KKLKV 117 (840)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~l~~ 117 (840)
++.|..+.| .+.+.+++++++||+.++++.+.|++. ... ...+...++..||..............+. ..+.+
T Consensus 13 Ca~C~~~ie-~l~~~~gV~~~~vn~~t~~~~v~~~~~--~~~~~~~~~~~v~~~gy~~~~~~~~~~~~~~~~~~~~~~~~ 89 (713)
T COG2217 13 CAACASRIE-ALNKLPGVEEARVNLATERATVVYDPE--EVDLPADIVAAVEKAGYSARLTAALADPAEAEARLLRELLR 89 (713)
T ss_pred cHHHHHHHH-HHhcCCCeeEEEeecccceEEEEeccc--ccccHHHHHHHHHhcCccccccccccchhhhhhhhhhhHHH
Confidence 446778888 899999999999999999999999765 233 56788889999998765111111111110 11222
Q ss_pred hcCHHHHHHHhC----CCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHH--HH-HHHHHHHhh
Q 003189 118 HGGVEGIAEKLS----TSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMIL--AV-CALVSLVVG 190 (840)
Q Consensus 118 ~~gv~~l~~~l~----~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il--~i-~a~is~~~~ 190 (840)
...+.++..... .....|. . ...+......-......+.|||+.+|+.++.....|. +. +++.+++++
T Consensus 90 ~~~i~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~l~~~v~~~~g~~f~~~a~~~l~~~~~~md~Lv~la~~~A~~~s 164 (713)
T COG2217 90 RLIIAGLLTLPLLLLSLGLLLGA--F---LLPWVSFLLATPVLFYGGWPFYRGAWRALRRGRLNMDTLVALATIGAYAYS 164 (713)
T ss_pred HHHHHHHHHHHHHHHHHHhhcch--h---hHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH
Confidence 222333332111 1111111 0 1111111110000112578899999999998865542 22 222333444
Q ss_pred hcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHh------hhcCceEEEEE-CCeEEEEeccCCCCCcEEE
Q 003189 191 IATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR------EKKKITVQVAR-NGFRRKISIYDLLPGDIVH 263 (840)
Q Consensus 191 ~~~~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~------~~~~~~v~V~R-dG~~~~I~~~dLvvGDIV~ 263 (840)
.+..-+. .||+..++++.++++ ++|.+.+...+..+ .+.+..+++++ ||+.++|+++||++||+|.
T Consensus 165 ~~~~~~~-~yf~~aa~ii~l~~~------G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~ 237 (713)
T COG2217 165 LYATLFP-VYFEEAAMLIFLFLL------GRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVL 237 (713)
T ss_pred HHHHhhh-hHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEE
Confidence 3321111 678877776665554 77877777665333 24567887776 5668999999999999999
Q ss_pred ecCCCcccccEEEEeecceEEecccccCCCCccccCCCCCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCCC
Q 003189 264 LCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDE 343 (840)
Q Consensus 264 l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~ 343 (840)
++|||+||+||++++|++ .||||+|||||.|+.|.+++. |++||.|.+|..+++|+++|.+|.+++|.+++++++..|
T Consensus 238 VrpGE~IPvDG~V~~G~s-~vDeS~iTGEs~PV~k~~Gd~-V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~K 315 (713)
T COG2217 238 VRPGERIPVDGVVVSGSS-SVDESMLTGESLPVEKKPGDE-VFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSK 315 (713)
T ss_pred ECCCCEecCCeEEEeCcE-EeecchhhCCCCCEecCCCCE-EeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCC
Confidence 999999999999999998 999999999999999999987 999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHH
Q 003189 344 TPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLS 423 (840)
Q Consensus 344 tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~ 423 (840)
+|.|+..|+++.+|+++++++++++|++|.+..- .++...+..+++++|++|||+|.+++|++
T Consensus 316 a~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~-----------------~~~~~a~~~a~avLVIaCPCALgLAtP~a 378 (713)
T COG2217 316 APIQRLADRVASYFVPVVLVIAALTFALWPLFGG-----------------GDWETALYRALAVLVIACPCALGLATPTA 378 (713)
T ss_pred chHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcC-----------------CcHHHHHHHHHhheeeeCccHHHhHHHHH
Confidence 9999999999999999999999999987643210 03556889999999999999999999999
Q ss_pred HHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHH
Q 003189 424 LAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQ 503 (840)
Q Consensus 424 l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 503 (840)
+..++.+.+++|+|+|+..++|+++++|+|+||||||||+|+|+|+++...+. + .++.+.+.
T Consensus 379 i~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~--~--------------e~~~L~la-- 440 (713)
T COG2217 379 ILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG--D--------------EDELLALA-- 440 (713)
T ss_pred HHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC--C--------------HHHHHHHH--
Confidence 99999999999999999999999999999999999999999999999876533 0 12334332
Q ss_pred HHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHcCCC-hHHHhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEcC
Q 003189 504 SIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGD-FQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKG 582 (840)
Q Consensus 504 ~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~-~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~KG 582 (840)
. .++ ..+.||+.+|+++++...+.. .+. .+.+| -.|+..+..+.. +.-|
T Consensus 441 -A------alE-------~~S~HPiA~AIv~~a~~~~~~~~~~-------~~~i~------G~Gv~~~v~g~~---v~vG 490 (713)
T COG2217 441 -A------ALE-------QHSEHPLAKAIVKAAAERGLPDVED-------FEEIP------GRGVEAEVDGER---VLVG 490 (713)
T ss_pred -H------HHH-------hcCCChHHHHHHHHHHhcCCCCccc-------eeeec------cCcEEEEECCEE---EEEc
Confidence 2 122 227899999999988776521 110 11111 123322332322 3337
Q ss_pred chHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCC
Q 003189 583 ASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMR 662 (840)
Q Consensus 583 a~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR 662 (840)
++..+.+. +...+ . ..+..+.+..+|..++.++ .|..++|++++.|++|
T Consensus 491 ~~~~~~~~--------~~~~~--~-----~~~~~~~~~~~G~t~v~va----------------~dg~~~g~i~~~D~~R 539 (713)
T COG2217 491 NARLLGEE--------GIDLP--L-----LSERIEALESEGKTVVFVA----------------VDGKLVGVIALADELR 539 (713)
T ss_pred CHHHHhhc--------CCCcc--c-----hhhhHHHHHhcCCeEEEEE----------------ECCEEEEEEEEeCCCC
Confidence 76554321 11111 1 3445667778888777776 4568999999999999
Q ss_pred cchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHH
Q 003189 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLV 742 (840)
Q Consensus 663 ~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V 742 (840)
|+++++|++||+.|+++.|+||||..+|+++|+++||.. |+|.+.|+||.++|
T Consensus 540 ~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~---------------------------v~AellPedK~~~V 592 (713)
T COG2217 540 PDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE---------------------------VRAELLPEDKAEIV 592 (713)
T ss_pred hhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh---------------------------heccCCcHHHHHHH
Confidence 999999999999999999999999999999999999965 99999999999999
Q ss_pred HHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 743 KHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLT 822 (840)
Q Consensus 743 ~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~ 822 (840)
+.||++ |++|+|+|||+||+|||++|||||||| +|+|+|+++||++|++||+..++++++.+|+++.+||||+.|++.
T Consensus 593 ~~l~~~-g~~VamVGDGINDAPALA~AdVGiAmG-~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~ 670 (713)
T COG2217 593 RELQAE-GRKVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFG 670 (713)
T ss_pred HHHHhc-CCEEEEEeCCchhHHHHhhcCeeEeec-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998 999999999999999999999999999 799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 003189 823 VNVVALIVNFSS 834 (840)
Q Consensus 823 ~N~~~l~~~~~~ 834 (840)
||+++++++..+
T Consensus 671 yn~~~iplA~~g 682 (713)
T COG2217 671 YNAIAIPLAAGG 682 (713)
T ss_pred HHHHHHHHHHHh
Confidence 999999999875
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-93 Score=882.42 Aligned_cols=663 Identities=25% Similarity=0.339 Sum_probs=529.8
Q ss_pred cCCCCCCCCCCccH---HHHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 150 YGINKFTESPARGF---WVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSL 226 (840)
Q Consensus 150 ~G~N~~~~~~~~~f---~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~ 226 (840)
|..|.+...+...+ ++.+|++|+.+.++++++++++++++.+... +....+++++++++++++.++.++.
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~-------~~~t~~~pL~~v~~~~~~~~~~ed~ 73 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPT-------YRGTSIVPLAFVLIVTAIKEAIEDI 73 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCC-------CccHhHHhHHHHHHHHHHHHHHHHH
Confidence 56788877665554 5899999999999999999999998876532 2334566778888899999999999
Q ss_pred HHhHhHhhhcCceEEEEEC-CeEEEEeccCCCCCcEEEecCCCcccccEEEEeecc----eEEecccccCCCCccccCCC
Q 003189 227 QFKDLDREKKKITVQVARN-GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS----VLINESSLTGESEPVNVNAL 301 (840)
Q Consensus 227 ~~~~l~~~~~~~~v~V~Rd-G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~----l~VDES~LTGES~pv~k~~~ 301 (840)
++++.++..++..++|+|+ |++++|+++||+|||+|.|++||+|||||+++++++ +.||||+|||||.|+.|...
T Consensus 74 ~r~~~d~~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~ 153 (1057)
T TIGR01652 74 RRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQAL 153 (1057)
T ss_pred HHHHhHHHHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecc
Confidence 9999999888899999996 899999999999999999999999999999999654 89999999999999988421
Q ss_pred -----------------------------------------------CCeEEeccEEee-ceEEEEEEEEcccchHHHHH
Q 003189 302 -----------------------------------------------NPFLLSGTKVQN-GSCKMLVTTVGMRTQWGKLM 333 (840)
Q Consensus 302 -----------------------------------------------~~~l~sGt~v~~-G~~~~~V~~vG~~T~~g~i~ 333 (840)
++++++||.+.+ |++.++|++||.+|.+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~-- 231 (1057)
T TIGR01652 154 EETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMR-- 231 (1057)
T ss_pred hhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhh--
Confidence 256889999998 999999999999996654
Q ss_pred HhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccC-----CcChHHHHHHHHHHHHHH
Q 003189 334 ATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWS-----GDDALEILEFFAIAVTIV 408 (840)
Q Consensus 334 ~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ai~il 408 (840)
.......++++++++++++..++..+.++++++++++.. ++........|... ......++..|..++.++
T Consensus 232 -n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~---~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~ 307 (1057)
T TIGR01652 232 -NATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAG---IWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILF 307 (1057)
T ss_pred -cCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHH---heecccCCCccceecCcccccchhHHHHHHHHHHHHH
Confidence 455566678999999999988887776666665554321 11110001112110 011123444667788899
Q ss_pred HHhcCCchHHHHHHHHHHHH------HHHhcc----ccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeee
Q 003189 409 VVAVPEGLPLAVTLSLAFAM------KKMMND----KALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIK 478 (840)
Q Consensus 409 vva~P~~Lplav~l~l~~~~------~~l~~~----~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~ 478 (840)
+.++|++||..++++.+..+ .+|.++ +++||+.+++|+||++++||+|||||||+|+|++.++++++..+
T Consensus 308 ~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y 387 (1057)
T TIGR01652 308 SSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSY 387 (1057)
T ss_pred hhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEe
Confidence 99999999999999999998 788875 49999999999999999999999999999999999999988766
Q ss_pred eecCCC---------C--CC-C----CC-----------------CCCChhHHHHHHHHHHhcCCceEEecCCC---cee
Q 003189 479 EVDNSK---------G--TP-A----FG-----------------SSIPASASKLLLQSIFNNTGGEVVIGEGN---KTE 522 (840)
Q Consensus 479 ~~~~~~---------~--~~-~----~~-----------------~~~~~~~~~~l~~~i~~~~~~~~~~~~~~---~~~ 522 (840)
...... . .+ . .. .....+....+..+++.||+.....++++ ...
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y 467 (1057)
T TIGR01652 388 GDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITY 467 (1057)
T ss_pred cCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEE
Confidence 421100 0 00 0 00 00001112334556777777665532221 223
Q ss_pred EcCChhhHHHHHHHHHcCCChHH--------------HhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHH
Q 003189 523 ILGTPTETAILEFGLLLGGDFQA--------------ERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIIL 588 (840)
Q Consensus 523 ~~g~p~e~All~~~~~~~~~~~~--------------~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~KGa~e~il 588 (840)
..++|+|.|+++++...|+.+.. ....+++++.+||+|+||||+++++.+++++.+++|||||.|+
T Consensus 468 ~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il 547 (1057)
T TIGR01652 468 QAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIF 547 (1057)
T ss_pred EccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHH
Confidence 46999999999999988875432 2236889999999999999999999888889999999999999
Q ss_pred HhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCC--------------C--------CCCCC
Q 003189 589 AACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA--------------D--------APIPT 646 (840)
Q Consensus 589 ~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~--------------~--------~~~~~ 646 (840)
++|++ .+++.++.+.+.+++|+.+|+||+++|||.++++... + .+..|
T Consensus 548 ~~~~~----------~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE 617 (1057)
T TIGR01652 548 KRLSS----------GGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIE 617 (1057)
T ss_pred HHhhc----------cchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 99974 1234567788999999999999999999998753100 0 02357
Q ss_pred CceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC----------------------
Q 003189 647 EGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG---------------------- 704 (840)
Q Consensus 647 ~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~---------------------- 704 (840)
++++|+|+++++||+||+++++|+.|++|||++||+|||+.+||.+||++|||..++.
T Consensus 618 ~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~ 697 (1057)
T TIGR01652 618 KDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKF 697 (1057)
T ss_pred hcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999986542
Q ss_pred -------------------ccccChhhhcCCHH----HHhhhcCCc--eEEEecCcccHHHHHHHHHHhCCCEEEEEcCC
Q 003189 705 -------------------IAIEGPEFREKSDE----ELSKLIPKI--QVMARSSPMDKHTLVKHLRTTLGEVVAVTGDG 759 (840)
Q Consensus 705 -------------------~~~~g~~~~~~~~~----~~~~~~~~~--~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG 759 (840)
++++|+++..+.++ ++.+++.+. .|+||++|+||.++|+.+|+..|++|+|+|||
T Consensus 698 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG 777 (1057)
T TIGR01652 698 GLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDG 777 (1057)
T ss_pred HHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 36778777754433 344455444 49999999999999999998658999999999
Q ss_pred ccCHHHhhhCCccEEecCCCcH--HHHhhcCEEeccCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 003189 760 TNDAPALHEADIGLAMGIAGTE--VAKESADVIILDDNFSTIVTVA-KWGRSVYINIQKFVQFQLTVNVVALIVNFSSAC 836 (840)
Q Consensus 760 ~ND~~al~~Advgiamg~~g~~--~ak~~aDivlldd~f~~i~~~i-~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~~~ 836 (840)
.||+|||++|||||+ +.|+| .|+++||++|.+ |..|.+++ .+||++|.|+++++.|.++.|++.+++.|++++
T Consensus 778 ~ND~~mlk~AdVGIg--i~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~ 853 (1057)
T TIGR01652 778 ANDVSMIQEADVGVG--ISGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSF 853 (1057)
T ss_pred CccHHHHhhcCeeeE--ecChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999995 46777 589999999986 99999997 779999999999999999999999999999888
Q ss_pred hcC
Q 003189 837 LTG 839 (840)
Q Consensus 837 ~~g 839 (840)
++|
T Consensus 854 ~~~ 856 (1057)
T TIGR01652 854 YNG 856 (1057)
T ss_pred HHc
Confidence 654
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-91 Score=803.00 Aligned_cols=545 Identities=26% Similarity=0.367 Sum_probs=450.3
Q ss_pred HHHhhhHHHHHHHHHHHHHHhhhcc--cC---CCCCcchhH---HHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceE
Q 003189 169 EALHDMTLMILAVCALVSLVVGIAT--EG---WPKGAHDGL---GIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240 (840)
Q Consensus 169 ~~l~~~~~~il~i~a~is~~~~~~~--~~---~~~~~~d~~---~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v 240 (840)
.+|+|+.++++++++++++++++.. .+ ....||++. .+++.+++..++.++.+++.++++++|.+..++..+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 3678999999999999999987642 11 113588753 344445666677778888888889898876656568
Q ss_pred EEEE-CCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecccccCCCCccccCCCCC--eEEeccEEeeceEE
Q 003189 241 QVAR-NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNP--FLLSGTKVQNGSCK 317 (840)
Q Consensus 241 ~V~R-dG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv~k~~~~~--~l~sGt~v~~G~~~ 317 (840)
+|+| ||++++|++++|+|||+|.+++||+|||||++++|+ +.||||+|||||.||.|..++. .+|+||.|.+|+++
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~ 186 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-ASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLV 186 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-EEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEE
Confidence 8886 899999999999999999999999999999999996 6999999999999999997764 49999999999999
Q ss_pred EEEEEEcccchHHHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHH
Q 003189 318 MLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEI 397 (840)
Q Consensus 318 ~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (840)
++|+++|.+|++|+|.+++++++.++||+|..++.+..++..+.+++ ++.+|.... |.+.
T Consensus 187 i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~---~~~~~~~~~------------~~~~----- 246 (675)
T TIGR01497 187 VECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLV---TATLWPFAA------------YGGN----- 246 (675)
T ss_pred EEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHH---HHHHHHHHH------------hcCh-----
Confidence 99999999999999999999999989999988887765544332221 122221110 1110
Q ss_pred HHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCee
Q 003189 398 LEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEI 477 (840)
Q Consensus 398 ~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~ 477 (840)
...+.++++++|++|||+|+...+.....++++|+++|+++|+++++|+||++|+||||||||||+|+|++++++..+..
T Consensus 247 ~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~ 326 (675)
T TIGR01497 247 AISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV 326 (675)
T ss_pred hHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCC
Confidence 12466779999999999988888888788999999999999999999999999999999999999999999988753211
Q ss_pred eeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEec
Q 003189 478 KEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEP 557 (840)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~p 557 (840)
+..+ +...++.++. .+.||+++|+++++.+.+.+... ..++..+..|
T Consensus 327 ------------------~~~~-ll~~aa~~~~------------~s~hP~a~Aiv~~a~~~~~~~~~--~~~~~~~~~p 373 (675)
T TIGR01497 327 ------------------DEKT-LADAAQLASL------------ADDTPEGKSIVILAKQLGIREDD--VQSLHATFVE 373 (675)
T ss_pred ------------------cHHH-HHHHHHHhcC------------CCCCcHHHHHHHHHHHcCCCccc--cccccceEEE
Confidence 1112 2233333321 14689999999999877654322 1234567899
Q ss_pred CCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCC
Q 003189 558 FNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE 637 (840)
Q Consensus 558 F~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~ 637 (840)
|++.++++++.+. ++ +.++||++|.+++.|+. +|...| ..+++.+++++++|+|++++|+
T Consensus 374 f~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~----~g~~~~------~~~~~~~~~~a~~G~r~l~va~------ 433 (675)
T TIGR01497 374 FTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEA----NGGHIP------TDLDQAVDQVARQGGTPLVVCE------ 433 (675)
T ss_pred EcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHh----cCCCCc------HHHHHHHHHHHhCCCeEEEEEE------
Confidence 9999888876543 22 56899999999998852 222222 3467778899999999999985
Q ss_pred CCCCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCH
Q 003189 638 FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSD 717 (840)
Q Consensus 638 ~~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~ 717 (840)
+.+++|+++++||+||+++++|++|+++|++++|+|||+..+|.++|+++||..
T Consensus 434 ----------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~---------------- 487 (675)
T TIGR01497 434 ----------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD---------------- 487 (675)
T ss_pred ----------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE----------------
Confidence 358999999999999999999999999999999999999999999999999964
Q ss_pred HHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCch
Q 003189 718 EELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFS 797 (840)
Q Consensus 718 ~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~ 797 (840)
++||++|+||..+|+.+|++ |+.|+|+|||+||+|||++|||||||| +|++++|++||++++||||+
T Consensus 488 -----------v~a~~~PedK~~~v~~lq~~-g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~~s 554 (675)
T TIGR01497 488 -----------FIAEATPEDKIALIRQEQAE-GKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPT 554 (675)
T ss_pred -----------EEcCCCHHHHHHHHHHHHHc-CCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCCHH
Confidence 99999999999999999998 999999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 798 TIVTVAKWGRSVYINIQKFVQFQLTVNVV 826 (840)
Q Consensus 798 ~i~~~i~~gR~~~~~i~k~i~f~l~~N~~ 826 (840)
+|+++++|||+++-+......|++.-++.
T Consensus 555 ~Iv~av~~GR~~~~t~~~~~t~~~~~~~~ 583 (675)
T TIGR01497 555 KLIEVVHIGKQLLITRGALTTFSIANDVA 583 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHheeeecccHH
Confidence 99999999999999999999999877654
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-86 Score=813.43 Aligned_cols=666 Identities=22% Similarity=0.301 Sum_probs=523.8
Q ss_pred hcCCCCCCCCCCccHH----HHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 003189 149 IYGINKFTESPARGFW----VYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQ 224 (840)
Q Consensus 149 ~~G~N~~~~~~~~~f~----~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv~~v~~~~~~~~ 224 (840)
.|..|.+...+. ++| +.+|+||+...++++++++++.++..+... ...+.++++++++++++++++.+
T Consensus 86 ~f~~N~i~TsKY-t~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~-------~~~t~~~PL~~vl~v~~ike~~E 157 (1178)
T PLN03190 86 EFAGNSIRTAKY-SVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVF-------GRGASILPLAFVLLVTAVKDAYE 157 (1178)
T ss_pred cCCCCeeecccc-ccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccC-------CcchHHHHHHHHHHHHHHHHHHH
Confidence 588999976553 333 678999999999999999999998876542 23456678999999999999999
Q ss_pred HHHHhHhHhhhcCceEEEEECCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecc----eEEecccccCCCCccccCC
Q 003189 225 SLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS----VLINESSLTGESEPVNVNA 300 (840)
Q Consensus 225 ~~~~~~l~~~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~----l~VDES~LTGES~pv~k~~ 300 (840)
+.++++.++..++..++|+|+|.++++++.||+|||+|.|++||+|||||+++++++ +.||||+|||||.|+.|..
T Consensus 158 d~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~ 237 (1178)
T PLN03190 158 DWRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYA 237 (1178)
T ss_pred HHHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecc
Confidence 999999999989999999999999999999999999999999999999999998443 7999999999999998842
Q ss_pred C--------------------------------------------CCeEEeccEEeec-eEEEEEEEEcccchHHHHHHh
Q 003189 301 L--------------------------------------------NPFLLSGTKVQNG-SCKMLVTTVGMRTQWGKLMAT 335 (840)
Q Consensus 301 ~--------------------------------------------~~~l~sGt~v~~G-~~~~~V~~vG~~T~~g~i~~~ 335 (840)
. +++++.||.+.+. .+.++|++||.+| |++..
T Consensus 238 ~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dT---K~~~N 314 (1178)
T PLN03190 238 KQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRET---KAMLN 314 (1178)
T ss_pred cchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhh---hHhhc
Confidence 1 2356667776653 6999999999999 56666
Q ss_pred hcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCc-----------Ch----HHHHHH
Q 003189 336 LSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGD-----------DA----LEILEF 400 (840)
Q Consensus 336 ~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~-----------~~----~~~~~~ 400 (840)
-..+..+.+++++++|++..++..+.++++++++++... +.........+..|... .. ...+..
T Consensus 315 ~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~-~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (1178)
T PLN03190 315 NSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAV-WLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFT 393 (1178)
T ss_pred CCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHh-hhccccccccccccccccccccccccccccchhhHHHHHH
Confidence 666667889999999999988877776666655543211 11100000000011100 00 011222
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhccc----------cccccchhhhccCCeeEEEecccCccccCceEEEE
Q 003189 401 FAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDK----------ALVRHLAACETMGSATSICSDKTGTLTTNHMTVLK 470 (840)
Q Consensus 401 ~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~----------ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~ 470 (840)
|...+.++-..+|.+|+..+.++....+..|.+|. +.+|+.+..|+||++++||+|||||||+|+|++.+
T Consensus 394 f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~ 473 (1178)
T PLN03190 394 FLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQC 473 (1178)
T ss_pred HHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEE
Confidence 33344555688999999999999977677777765 78999999999999999999999999999999999
Q ss_pred EEEcCeeeeecCCC-------------C---CCCCC------------CCCC-h--hHHHHHHHHHHhcCCceEEecCC-
Q 003189 471 ACICEEIKEVDNSK-------------G---TPAFG------------SSIP-A--SASKLLLQSIFNNTGGEVVIGEG- 518 (840)
Q Consensus 471 ~~~~~~~~~~~~~~-------------~---~~~~~------------~~~~-~--~~~~~l~~~i~~~~~~~~~~~~~- 518 (840)
+++++..|...... + .+... .... + .....+..+++.||+......++
T Consensus 474 ~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~ 553 (1178)
T PLN03190 474 ASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDT 553 (1178)
T ss_pred EEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCC
Confidence 99987665321100 0 00000 0000 0 11233456777788776542111
Q ss_pred -C----ce-eEcCChhhHHHHHHHHHcCC------------ChHHHhhccceEEEecCCCCCceEEEEEEeCCCcEEEEE
Q 003189 519 -N----KT-EILGTPTETAILEFGLLLGG------------DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHC 580 (840)
Q Consensus 519 -~----~~-~~~g~p~e~All~~~~~~~~------------~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~ 580 (840)
+ .. ...++|+|.||+++|...|+ +....+..+++++++||+|+||||+|+++.+++.+.+++
T Consensus 554 ~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~ 633 (1178)
T PLN03190 554 SDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFV 633 (1178)
T ss_pred CCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEE
Confidence 1 12 34559999999999999987 444566789999999999999999999998888899999
Q ss_pred cCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCC-------------------
Q 003189 581 KGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSAD------------------- 641 (840)
Q Consensus 581 KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~------------------- 641 (840)
|||||.|++.|++.. +++.++.+.+.+++|+++|+|||++|||+++++...+
T Consensus 634 KGA~e~il~~~~~~~---------~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l 704 (1178)
T PLN03190 634 KGADTSMFSVIDRSL---------NMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALL 704 (1178)
T ss_pred ecCcHHHHHhhcccc---------cchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHH
Confidence 999999999997542 2345667889999999999999999999996531110
Q ss_pred ---CCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC--------------
Q 003189 642 ---APIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG-------------- 704 (840)
Q Consensus 642 ---~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~-------------- 704 (840)
.+..|+|++++|+++++||+|++++++|+.|+++||+++|+|||+..||.+||+.|||.+++.
T Consensus 705 ~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~ 784 (1178)
T PLN03190 705 RKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCR 784 (1178)
T ss_pred HhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHH
Confidence 124589999999999999999999999999999999999999999999999999999975431
Q ss_pred -----------------------------------ccccChhhhcCCH----HHHhhhcCCce--EEEecCcccHHHHHH
Q 003189 705 -----------------------------------IAIEGPEFREKSD----EELSKLIPKIQ--VMARSSPMDKHTLVK 743 (840)
Q Consensus 705 -----------------------------------~~~~g~~~~~~~~----~~~~~~~~~~~--v~ar~~P~~K~~~V~ 743 (840)
++++|.++..+.+ +++.+++.++. |+||++|.||+++|+
T Consensus 785 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~ 864 (1178)
T PLN03190 785 KSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVA 864 (1178)
T ss_pred HHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHH
Confidence 4566666665543 34555555444 799999999999999
Q ss_pred HHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcH--HHHhhcCEEeccCCchHHHHH-HHHHHHHHHHHHHHHHHH
Q 003189 744 HLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE--VAKESADVIILDDNFSTIVTV-AKWGRSVYINIQKFVQFQ 820 (840)
Q Consensus 744 ~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~--~ak~~aDivlldd~f~~i~~~-i~~gR~~~~~i~k~i~f~ 820 (840)
.+|+..+++|+|+|||.||+|||++||||| |++|+| .|+.+||+.+.. |..+.++ +.+||+.|.++.+.+.|.
T Consensus 865 ~vk~~~~~vtlaIGDGaNDv~mIq~AdVGI--GIsG~EG~qA~~aSDfaI~~--Fr~L~rLLlvHGr~~y~R~s~~i~y~ 940 (1178)
T PLN03190 865 LVKNRTSDMTLAIGDGANDVSMIQMADVGV--GISGQEGRQAVMASDFAMGQ--FRFLVPLLLVHGHWNYQRMGYMILYN 940 (1178)
T ss_pred HHHhcCCcEEEEECCCcchHHHHHhcCeee--eecCchhHHHHHhhccchhh--hHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 999874589999999999999999999999 778998 789999999976 9999999 558999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcC
Q 003189 821 LTVNVVALIVNFSSACLTG 839 (840)
Q Consensus 821 l~~N~~~l~~~~~~~~~~g 839 (840)
++.|++..++.|++++++|
T Consensus 941 fYKN~~~~~~qf~f~~~~~ 959 (1178)
T PLN03190 941 FYRNAVFVLVLFWYVLFTC 959 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999876
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-84 Score=774.16 Aligned_cols=640 Identities=20% Similarity=0.282 Sum_probs=485.6
Q ss_pred hccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChhhhhhhhccCChhHHHHhcCHH
Q 003189 43 ANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGVE 122 (840)
Q Consensus 43 ~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~gv~ 122 (840)
..|....|+.....+++..+++++.+.+..+.|+.. . . ..+...++..||.+.+.+-....+.++......+.-.-
T Consensus 65 ~sCa~~Ie~aL~~~~GV~~v~Vn~at~k~~V~~d~~--~-~-~~I~~aI~~~Gy~a~~~~~~~~~~~~~~~~~~~~~~~~ 140 (741)
T PRK11033 65 PSCARKVENAVRQLAGVNQVQVLFATEKLVVDADND--I-R-AQVESAVQKAGFSLRDEQAAAAAPESRLKSENLPLITL 140 (741)
T ss_pred HHHHHHHHHHHhcCCCeeeEEEEcCCCeEEEEeccc--c-h-HHHHHHHHhcccccccccchhhhHHHHHHHHHHHHHHH
Confidence 467777788888888888899998888877776433 1 1 34445567789987654311100010110011111001
Q ss_pred HHHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhH---HHHHH-HHHHHHHHhhhcccCCCC
Q 003189 123 GIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMT---LMILA-VCALVSLVVGIATEGWPK 198 (840)
Q Consensus 123 ~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~---~~il~-i~a~is~~~~~~~~~~~~ 198 (840)
....++..-+ .++... . .+...... . ...+.||++.+|+.++... +-.|+ ++++.+++++
T Consensus 141 ~~~~~~~~~~-~~~~~~---~-~~~~~~~~-~--~~~~~~~~~~a~~~l~~~~~~~~~~L~~~a~~~a~~~~-------- 204 (741)
T PRK11033 141 AVMMAISWGL-EQFNHP---F-GQLAFIAT-T--LVGLYPIARKALRLIRSGSPFAIETLMSVAAIGALFIG-------- 204 (741)
T ss_pred HHHHHHHHHH-hhhhhH---H-HHHHHHHH-H--HHHHHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHc--------
Confidence 1112221100 011110 1 11111010 0 1245689999999997643 22333 3333444433
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEECCeEEEEeccCCCCCcEEEecCCCcccccEEEEe
Q 003189 199 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 278 (840)
Q Consensus 199 ~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~ 278 (840)
.|+++..+++.+++.-.+....+++.++..++|.+ +.+..++|+|||++++|++++|+|||+|.|++||+|||||+|++
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~-l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~ 283 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMA-LVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLS 283 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEE
Confidence 25666555444444444444444444444445554 45668999999999999999999999999999999999999999
Q ss_pred ecceEEecccccCCCCccccCCCCCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCCCChHHHHHHHHHHHHH
Q 003189 279 GFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIG 358 (840)
Q Consensus 279 g~~l~VDES~LTGES~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~ 358 (840)
|+ ..||||+|||||.|+.|..++. ||+||.+.+|.++++|+++|.+|.+|+|.+++++++.+++|+|+.+|+++.+++
T Consensus 284 g~-~~vdes~lTGEs~Pv~k~~Gd~-V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~ 361 (741)
T PRK11033 284 PF-ASFDESALTGESIPVERATGEK-VPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYT 361 (741)
T ss_pred Cc-EEeecccccCCCCCEecCCCCe-eccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Confidence 97 5999999999999999998875 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhcccccc
Q 003189 359 KIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALV 438 (840)
Q Consensus 359 ~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilv 438 (840)
++++++++++|++|...+ +. .+...+..++++++++|||+|.+++|+++..++.+++|+|+++
T Consensus 362 ~~v~~~a~~~~~~~~~~~-------~~----------~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gili 424 (741)
T PRK11033 362 PAIMLVALLVILVPPLLF-------AA----------PWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALI 424 (741)
T ss_pred HHHHHHHHHHHHHHHHHc-------cC----------CHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEE
Confidence 999999999998863211 00 2345678899999999999999999999999999999999999
Q ss_pred ccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCC
Q 003189 439 RHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEG 518 (840)
Q Consensus 439 r~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 518 (840)
|+++++|+|+++|+||||||||||+|+|+|++++..+... .++.+.+. .. ++
T Consensus 425 k~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~~---------------~~~~l~~a---a~------~e---- 476 (741)
T PRK11033 425 KGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGIS---------------ESELLALA---AA------VE---- 476 (741)
T ss_pred cCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCCC---------------HHHHHHHH---HH------Hh----
Confidence 9999999999999999999999999999999986533210 01222221 11 11
Q ss_pred CceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceE---EEEEEeCCCcEEEEEcCchHHHHHhccccc
Q 003189 519 NKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQM---GVVIELPEGGFRVHCKGASEIILAACDKFL 595 (840)
Q Consensus 519 ~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~---~vv~~~~~~~~~~~~KGa~e~il~~c~~~~ 595 (840)
..+.||+++|+++++...+.+ .||.++++.+ ++....++..+ .-|+++.+.+
T Consensus 477 ---~~s~hPia~Ai~~~a~~~~~~-------------~~~~~~~~~~~g~Gv~~~~~g~~~---~ig~~~~~~~------ 531 (741)
T PRK11033 477 ---QGSTHPLAQAIVREAQVRGLA-------------IPEAESQRALAGSGIEGQVNGERV---LICAPGKLPP------ 531 (741)
T ss_pred ---cCCCCHHHHHHHHHHHhcCCC-------------CCCCcceEEEeeEEEEEEECCEEE---EEecchhhhh------
Confidence 126799999999998766543 4666666664 22222333322 2377766532
Q ss_pred ccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhC
Q 003189 596 NSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSA 675 (840)
Q Consensus 596 ~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~a 675 (840)
++ ..+.+.++.+..+|++++++|+ +.+++|+++|+|++|||++++|++|+++
T Consensus 532 --------~~----~~~~~~~~~~~~~g~~~v~va~----------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~ 583 (741)
T PRK11033 532 --------LA----DAFAGQINELESAGKTVVLVLR----------------NDDVLGLIALQDTLRADARQAISELKAL 583 (741)
T ss_pred --------cc----HHHHHHHHHHHhCCCEEEEEEE----------------CCEEEEEEEEecCCchhHHHHHHHHHHC
Confidence 12 2244556788999999999984 4689999999999999999999999999
Q ss_pred CCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEE
Q 003189 676 GITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAV 755 (840)
Q Consensus 676 Gi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~ 755 (840)
|++++|+|||+..+|.++|+++||. ++++.+|+||..+|+.||+. +.|+|
T Consensus 584 gi~~~llTGd~~~~a~~ia~~lgi~----------------------------~~~~~~p~~K~~~v~~l~~~--~~v~m 633 (741)
T PRK11033 584 GIKGVMLTGDNPRAAAAIAGELGID----------------------------FRAGLLPEDKVKAVTELNQH--APLAM 633 (741)
T ss_pred CCEEEEEcCCCHHHHHHHHHHcCCC----------------------------eecCCCHHHHHHHHHHHhcC--CCEEE
Confidence 9999999999999999999999995 67889999999999999954 68999
Q ss_pred EcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 756 TGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSS 834 (840)
Q Consensus 756 ~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~ 834 (840)
+|||.||+|||++|||||||| +|+++++++||+++++|++..|++++++||+++.||+||+.|++.||++++++++++
T Consensus 634 vGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~g 711 (741)
T PRK11033 634 VGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTTLLG 711 (741)
T ss_pred EECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999 899999999999999999999999999999999999999999999999999998765
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-86 Score=744.88 Aligned_cols=663 Identities=22% Similarity=0.296 Sum_probs=510.3
Q ss_pred ccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChhhh-hhhhc-----cCC-----h
Q 003189 44 NLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDEL-GSIVE-----GHD-----I 112 (840)
Q Consensus 44 ~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~-----~~~-----~ 112 (840)
.+....|+...+.+++..+++...+.++.+.|++. ...+.++.+.+.+.||...-... ....+ ..+ .
T Consensus 159 s~~~~ie~~l~~l~gV~~~sv~~~t~~~~V~~~~~--~~~pr~i~k~ie~~~~~~~~~~~~~~~~~~~l~~~~ei~~w~~ 236 (951)
T KOG0207|consen 159 SCVSKIESILERLRGVKSFSVSLATDTAIVVYDPE--ITGPRDIIKAIEETGFEASVRPYGDTTFKNSLKHKEEIRKWKR 236 (951)
T ss_pred chhhhhHHHHhhccCeeEEEEeccCCceEEEeccc--ccChHHHHHHHHhhcccceeeeccccchhhhhhhhhHHHhcch
Confidence 44556678889999999999999999999888776 67778888888888886543321 11111 111 1
Q ss_pred hHHHHhcCHHHHHH--HhCC-----------CcCCCCCccHHHHHHHHHhcCCCCCCC----CCCccHHHHHHHHHhhhH
Q 003189 113 KKLKVHGGVEGIAE--KLST-----------SITDGISTSEHLLNRRKEIYGINKFTE----SPARGFWVYVWEALHDMT 175 (840)
Q Consensus 113 ~~l~~~~gv~~l~~--~l~~-----------~~~~Gl~~~~~~~~~r~~~~G~N~~~~----~~~~~f~~~~~~~l~~~~ 175 (840)
..+... +...... +.-. .+..|+.-.. +-.+.+.. .-+++||.-+|+++++..
T Consensus 237 ~fl~s~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~l~~~L~~~vqf~~G~~fy~~A~ksL~~g~ 306 (951)
T KOG0207|consen 237 PFLISL-GFSLPVSFAMIICPPLAWILALLVPFLPGLSYGN---------SLSFVLATPVQFVGGRPFYLAAYKSLKRGS 306 (951)
T ss_pred HHHHHH-HHHHHHHHHHHHhccchhhhhhhccccccchhhh---------HHHhhhheeeEEecceeeHHHHHHHHhcCC
Confidence 111111 1111111 1111 2223333221 11122222 268999999999999887
Q ss_pred HHH--HH-HHHHHHHHhhhcc------cCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHh------hhcCceE
Q 003189 176 LMI--LA-VCALVSLVVGIAT------EGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR------EKKKITV 240 (840)
Q Consensus 176 ~~i--l~-i~a~is~~~~~~~------~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~------~~~~~~v 240 (840)
..| |+ +.+..++++.+.. ...+..+||...|++.++.+ ++|.++++..+..+ .+.+..+
T Consensus 307 ~nMdvLv~L~t~aay~~S~~~~~~~~~~~~~~tfFdt~~MLi~fi~l------gr~LE~~Ak~kts~alskLmsl~p~~a 380 (951)
T KOG0207|consen 307 ANMDVLVVLGTTAAYFYSIFSLLAAVVFDSPPTFFDTSPMLITFITL------GRWLESLAKGKTSEALSKLMSLAPSKA 380 (951)
T ss_pred CCceeehhhHHHHHHHHHHHHHHHHHHccCcchhccccHHHHHHHHH------HHHHHHHhhccchHHHHHHhhcCcccc
Confidence 654 22 1122222222211 12256788988887766665 89999988776443 2456788
Q ss_pred EEEECCe-EEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecccccCCCCccccCCCCCeEEeccEEeeceEEEE
Q 003189 241 QVARNGF-RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKML 319 (840)
Q Consensus 241 ~V~RdG~-~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv~k~~~~~~l~sGt~v~~G~~~~~ 319 (840)
.++.+|+ .++|+++.|.+||+|.+.||++||+||++++|++ .||||++|||+.||.|..+++ |.+||.+.+|...+.
T Consensus 381 ~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss-~VDEs~iTGEs~PV~Kk~gs~-ViaGsiN~nG~l~Vk 458 (951)
T KOG0207|consen 381 TIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSS-EVDESLITGESMPVPKKKGST-VIAGSINLNGTLLVK 458 (951)
T ss_pred eEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEeCce-eechhhccCCceecccCCCCe-eeeeeecCCceEEEE
Confidence 8998886 8999999999999999999999999999999986 999999999999999999886 999999999999999
Q ss_pred EEEEcccchHHHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHH
Q 003189 320 VTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILE 399 (840)
Q Consensus 320 V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (840)
+|++|.+|.+++|.+++++++..++|+|+.+|+++.+|+++++++++.+|++|++...+...+. ..| ...+..
T Consensus 459 aT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~---~~~----~~~~~~ 531 (951)
T KOG0207|consen 459 ATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYP---RSF----FDAFSH 531 (951)
T ss_pred EEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCc---chh----hHHHHH
Confidence 9999999999999999999999999999999999999999999999999999986543221111 111 135777
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeee
Q 003189 400 FFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE 479 (840)
Q Consensus 400 ~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~ 479 (840)
+|..++++++++|||+|.||+|++...+....+++|+|+|..+++|++.++++|+||||||||+|+++|+++....+..
T Consensus 532 a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~- 610 (951)
T KOG0207|consen 532 AFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPI- 610 (951)
T ss_pred HHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCcc-
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999987654421
Q ss_pred ecCCCCCCCCCCCCCh-hHHHHHHHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecC
Q 003189 480 VDNSKGTPAFGSSIPA-SASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPF 558 (840)
Q Consensus 480 ~~~~~~~~~~~~~~~~-~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF 558 (840)
+. +.+.+. +..+ ..+.||..+|+.+|++...-. .....+.....|
T Consensus 611 --------------~~~e~l~~v---------~a~E-------s~SeHPig~AIv~yak~~~~~----~~~~~~~~~~~~ 656 (951)
T KOG0207|consen 611 --------------SLKEALALV---------AAME-------SGSEHPIGKAIVDYAKEKLVE----PNPEGVLSFEYF 656 (951)
T ss_pred --------------cHHHHHHHH---------HHHh-------cCCcCchHHHHHHHHHhcccc----cCccccceeecc
Confidence 11 122221 1111 127799999999999876511 011112222223
Q ss_pred CCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCC
Q 003189 559 NSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF 638 (840)
Q Consensus 559 ~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~ 638 (840)
..+-+. +-+...+.. .+-|.-+.+. .+|...+ +.+++..++....|..+.+++
T Consensus 657 pg~g~~--~~~~~~~~~---i~iGN~~~~~--------r~~~~~~------~~i~~~~~~~e~~g~tvv~v~-------- 709 (951)
T KOG0207|consen 657 PGEGIY--VTVTVDGNE---VLIGNKEWMS--------RNGCSIP------DDILDALTESERKGQTVVYVA-------- 709 (951)
T ss_pred cCCCcc--cceEEeeeE---EeechHHHHH--------hcCCCCc------hhHHHhhhhHhhcCceEEEEE--------
Confidence 222222 112222222 2336655543 2333222 236667777778898888887
Q ss_pred CCCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHH
Q 003189 639 SADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDE 718 (840)
Q Consensus 639 ~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~ 718 (840)
-|.+++|++.++|++|||+..+|+.||+.|++++|+||||..+|+++|+++||..
T Consensus 710 --------vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~----------------- 764 (951)
T KOG0207|consen 710 --------VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGIDN----------------- 764 (951)
T ss_pred --------ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcce-----------------
Confidence 4678999999999999999999999999999999999999999999999999765
Q ss_pred HHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchH
Q 003189 719 ELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST 798 (840)
Q Consensus 719 ~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~ 798 (840)
|+|...|+||.+.|+.+|++ |+.|+|+|||+||+|||.+|||||+|| .|+++|.|+|||||+.+|+..
T Consensus 765 ----------V~aev~P~~K~~~Ik~lq~~-~~~VaMVGDGINDaPALA~AdVGIaig-~gs~vAieaADIVLmrn~L~~ 832 (951)
T KOG0207|consen 765 ----------VYAEVLPEQKAEKIKEIQKN-GGPVAMVGDGINDAPALAQADVGIAIG-AGSDVAIEAADIVLMRNDLRD 832 (951)
T ss_pred ----------EEeccCchhhHHHHHHHHhc-CCcEEEEeCCCCccHHHHhhccceeec-cccHHHHhhCCEEEEccchhh
Confidence 99999999999999999999 999999999999999999999999999 889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 799 IVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF 832 (840)
Q Consensus 799 i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~ 832 (840)
++.+++.+|++..+||.|+.|+++||+++++++.
T Consensus 833 v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAa 866 (951)
T KOG0207|consen 833 VPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAA 866 (951)
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhe
Confidence 9999999999999999999999999999999875
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-83 Score=720.52 Aligned_cols=645 Identities=23% Similarity=0.325 Sum_probs=492.0
Q ss_pred cCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHH
Q 003189 132 ITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSIL 211 (840)
Q Consensus 132 ~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~il 211 (840)
...||...+ +..|+..||.|.+.. +-+|.+.++.+..-+|+..+..++.+ ++... +.||-+.+|++.-+
T Consensus 157 ~~~gL~~~~--~~~r~~iyG~N~i~l-~ik~i~~iLv~EvL~PfYlFQ~fSv~----lW~~d----~Y~~YA~cI~iisv 225 (1140)
T KOG0208|consen 157 VSNGLERQE--IIDRRIIYGRNVISL-PIKSISQILVKEVLNPFYLFQAFSVA----LWLAD----SYYYYAFCIVIISV 225 (1140)
T ss_pred ccCCccHHH--HHhHHhhcCCceeee-ecccHHHHHHHhccchHHHHHhHHhh----hhhcc----cchhhhhHHHHHHH
Confidence 357888766 889999999999964 56789999999988888766554444 33322 13344555544333
Q ss_pred HHHHHHHHHHHHHHHHHhHhHhhh-cCceEEEEECCeEEEEeccCCCCCcEEEecC-CCcccccEEEEeecceEEecccc
Q 003189 212 LVVFVTATSDYKQSLQFKDLDREK-KKITVQVARNGFRRKISIYDLLPGDIVHLCM-GDQVPADGLFVSGFSVLINESSL 289 (840)
Q Consensus 212 lv~~v~~~~~~~~~~~~~~l~~~~-~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~-Gd~VPaDgvll~g~~l~VDES~L 289 (840)
.-++++. |...++-.++.+.. ....|+|+|||.+++|.++|||||||+.+.+ |-..|||+++++|+ |.||||+|
T Consensus 226 ~Si~~sv---~e~r~qs~rlr~mv~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~-civNEsmL 301 (1140)
T KOG0208|consen 226 YSIVLSV---YETRKQSIRLRSMVKFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGD-CIVNESML 301 (1140)
T ss_pred HHHHHHH---HHHHHHHHHHHHHhcCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCc-EEeecccc
Confidence 3333333 33344444444432 2358999999999999999999999999998 99999999999995 89999999
Q ss_pred cCCCCccccCC------------------CCCeEEeccEEee------ceEEEEEEEEcccchHHHHHHhhcCCCCCCCh
Q 003189 290 TGESEPVNVNA------------------LNPFLLSGTKVQN------GSCKMLVTTVGMRTQWGKLMATLSEGGDDETP 345 (840)
Q Consensus 290 TGES~pv~k~~------------------~~~~l~sGt~v~~------G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tp 345 (840)
||||.|+.|.+ ..+++|.||++.+ +.+.+.|++||.+|..|++.+++..+....
T Consensus 302 TGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~-- 379 (1140)
T KOG0208|consen 302 TGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVN-- 379 (1140)
T ss_pred cCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCcc--
Confidence 99999999952 2357999999974 779999999999999999999999875433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Q 003189 346 LQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLA 425 (840)
Q Consensus 346 lq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~ 425 (840)
.++-+-+..|.....++|++.|+...+.+.... . ++-..++.++.++.+.+|+|||.++++...
T Consensus 380 --fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~~g-----------~---~~~~iiirsLDliTi~VPPALPAaltvG~~ 443 (1140)
T KOG0208|consen 380 --FKFYRDSFKFILFLVIIALIGFIYTAIVLNLLG-----------V---PLKTIIIRSLDLITIVVPPALPAALTVGII 443 (1140)
T ss_pred --cHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHcC-----------C---CHHHHhhhhhcEEEEecCCCchhhhhHHHH
Confidence 333333333444444455555554433322211 1 355678889999999999999999999999
Q ss_pred HHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeee-------ecCCCCC--CCCCCCCChh
Q 003189 426 FAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE-------VDNSKGT--PAFGSSIPAS 496 (840)
Q Consensus 426 ~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~-------~~~~~~~--~~~~~~~~~~ 496 (840)
++.+||.|+||.+-+++.+...|+.+++|||||||||++.+.+..+........ ...+... ..........
T Consensus 444 ~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 523 (1140)
T KOG0208|consen 444 YAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSL 523 (1140)
T ss_pred HHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCC
Confidence 999999999999999999999999999999999999999999988776432100 0000000 0000000001
Q ss_pred HHHHHHHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHc-------CC-------------Ch-----HHHhh---
Q 003189 497 ASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL-------GG-------------DF-----QAERQ--- 548 (840)
Q Consensus 497 ~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~-------~~-------------~~-----~~~~~--- 548 (840)
....+..+++.||+-.... ....|+|+|.-+.+....- +. .. +...+
T Consensus 524 ~~~~~~~a~atCHSL~~v~-----g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~ 598 (1140)
T KOG0208|consen 524 PMGNLVAAMATCHSLTLVD-----GTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGE 598 (1140)
T ss_pred chHHHHHHHhhhceeEEeC-----CeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCC
Confidence 1234556667776433321 2457888877766543100 00 00 00001
Q ss_pred -ccceEEEecCCCCCceEEEEEEeCC-CcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccce
Q 003189 549 -ASKIVKVEPFNSVKKQMGVVIELPE-GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRT 626 (840)
Q Consensus 549 -~~~i~~~~pF~s~~k~~~vv~~~~~-~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~ 626 (840)
.+.+++.+||+|.-+||||++..++ ....+|+|||||.|.+.|+. +.....+++.++.|+.+|+|+
T Consensus 599 ~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p------------~tvP~dy~evl~~Yt~~GfRV 666 (1140)
T KOG0208|consen 599 GEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKP------------ETVPADYQEVLKEYTHQGFRV 666 (1140)
T ss_pred cceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCc------------ccCCccHHHHHHHHHhCCeEE
Confidence 4678999999999999999999764 67899999999999999974 122356889999999999999
Q ss_pred eEEEEEEcCCC-----CCCCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 003189 627 LCLACMEIGNE-----FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT 701 (840)
Q Consensus 627 l~~A~~~~~~~-----~~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~ 701 (840)
||+|+|+++.. ....++..|+|++|+|++.|++++|++++.+|++|.+|+|+++|+||||..||..+||+||+..
T Consensus 667 IAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~ 746 (1140)
T KOG0208|consen 667 IALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIE 746 (1140)
T ss_pred EEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccC
Confidence 99999999876 1234577899999999999999999999999999999999999999999999999999999986
Q ss_pred CCC-------------------------------------------------------ccccChhhhcC---CHHHHhhh
Q 003189 702 DNG-------------------------------------------------------IAIEGPEFREK---SDEELSKL 723 (840)
Q Consensus 702 ~~~-------------------------------------------------------~~~~g~~~~~~---~~~~~~~~ 723 (840)
+.. ++++|+.|+.+ ..+.+..+
T Consensus 747 p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~I 826 (1140)
T KOG0208|consen 747 PQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKI 826 (1140)
T ss_pred CCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHH
Confidence 432 56677777643 45677788
Q ss_pred cCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHH
Q 003189 724 IPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 724 ~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i 803 (840)
+.+..||||++|.||.++|+.||+. |..|+|+|||.||+.|||+|||||+++. ..|.-+|.+.-.-.+.+++.++|
T Consensus 827 l~~~~VfARMsP~qK~~Lie~lQkl-~y~VgfCGDGANDCgALKaAdvGISLSe---aEASvAApFTSk~~~I~cVp~vI 902 (1140)
T KOG0208|consen 827 LLKGTVFARMSPDQKAELIEALQKL-GYKVGFCGDGANDCGALKAADVGISLSE---AEASVAAPFTSKTPSISCVPDVI 902 (1140)
T ss_pred HhcCeEEeecCchhHHHHHHHHHhc-CcEEEecCCCcchhhhhhhcccCcchhh---hhHhhcCccccCCCchhhHhHHH
Confidence 8899999999999999999999988 9999999999999999999999999973 23566788887777899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 804 KWGRSVYINIQKFVQFQLTVNVVALIV 830 (840)
Q Consensus 804 ~~gR~~~~~i~k~i~f~l~~N~~~l~~ 830 (840)
++||+..-.--..++|...|.++..+.
T Consensus 903 rEGRaALVTSf~~FkYMalYs~iqFis 929 (1140)
T KOG0208|consen 903 REGRAALVTSFACFKYMALYSAIQFIS 929 (1140)
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHh
Confidence 999999999888889988888765443
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-83 Score=690.60 Aligned_cols=635 Identities=24% Similarity=0.384 Sum_probs=507.8
Q ss_pred HhcCHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhcccCC
Q 003189 117 VHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGW 196 (840)
Q Consensus 117 ~~~gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~ 196 (840)
..+.++.+.+.|...-+ ||++++ +++|++.||.|++.+++...|.+|+ .-+.+|.-++.-.+|++...+.-- .|.
T Consensus 19 ~~~p~eeVfeeL~~t~~-GLt~~E--~~eRlk~fG~NkleEkken~~lKFl-~Fm~~PlswVMEaAAimA~~Lang-~~~ 93 (942)
T KOG0205|consen 19 EAIPIEEVFEELLCTRE-GLTSDE--VEERLKIFGPNKLEEKKESKFLKFL-GFMWNPLSWVMEAAAIMAIGLANG-GGR 93 (942)
T ss_pred ccCchhhhHHHHhcCCC-CCchHH--HHHHHHhhCchhhhhhhhhHHHHHH-HHHhchHHHHHHHHHHHHHHHhcC-CCC
Confidence 34567777776666544 999988 9999999999999877666665543 344567677777788776655422 344
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEECCeEEEEeccCCCCCcEEEecCCCcccccEEE
Q 003189 197 PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLF 276 (840)
Q Consensus 197 ~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvl 276 (840)
+..|-|.+.|...+++...++.+.+|..-+....|.+.+. .+.+|+|||+|.++.+++||||||+.++.||+|||||++
T Consensus 94 ~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA-~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRL 172 (942)
T KOG0205|consen 94 PPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLA-PKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARL 172 (942)
T ss_pred CcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccC-cccEEeecCeeeeeeccccccCceeeeccCCEecCccce
Confidence 6789999888877777777777777766666677766443 478999999999999999999999999999999999999
Q ss_pred EeecceEEecccccCCCCccccCCCCCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCCCChHHHHHHHHHHH
Q 003189 277 VSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATI 356 (840)
Q Consensus 277 l~g~~l~VDES~LTGES~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~ 356 (840)
++|+-|.||+|.|||||.||.|.++++ +||||.|.+|++.|+|++||.+|..|+-..++... ...--+|+-++.+.++
T Consensus 173 l~gD~LkiDQSAlTGESLpvtKh~gd~-vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst-~~~GHFqkVLt~IGn~ 250 (942)
T KOG0205|consen 173 LEGDPLKIDQSALTGESLPVTKHPGDE-VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTGIGNF 250 (942)
T ss_pred ecCCccccchhhhcCCccccccCCCCc-eecccccccceEEEEEEEeccceeehhhHHhhcCC-CCcccHHHHHHhhhhH
Confidence 999999999999999999999999998 99999999999999999999999999999999884 4458899888887776
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHh-cCCchHHHHHHHHHHHHHHHhccc
Q 003189 357 IGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVA-VPEGLPLAVTLSLAFAMKKMMNDK 435 (840)
Q Consensus 357 ~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva-~P~~Lplav~l~l~~~~~~l~~~~ 435 (840)
+...+. +-.++.+...|..+. ...+.....+.++++. +|.|+|..++.+++.+..+|.++|
T Consensus 251 ci~si~---~g~lie~~vmy~~q~---------------R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqg 312 (942)
T KOG0205|consen 251 CICSIA---LGMLIEITVMYPIQH---------------RLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG 312 (942)
T ss_pred HHHHHH---HHHHHHHHhhhhhhh---------------hhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcc
Confidence 543221 111222222222111 1223334455666666 999999999999999999999999
Q ss_pred cccccchhhhccCCeeEEEecccCccccCceEEEE--EEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceE
Q 003189 436 ALVRHLAACETMGSATSICSDKTGTLTTNHMTVLK--ACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEV 513 (840)
Q Consensus 436 ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~ 513 (840)
+++++++|+|.|+.++++|+|||||||.|+++|.+ +.+. ....+++.+-+. .|..+ ..
T Consensus 313 AItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~---------------v~gv~~D~~~L~---A~rAs--r~ 372 (942)
T KOG0205|consen 313 AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVF---------------VKGVDKDDVLLT---AARAS--RK 372 (942)
T ss_pred cHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceee---------------ecCCChHHHHHH---HHHHh--hh
Confidence 99999999999999999999999999999999976 2111 111122222111 11111 11
Q ss_pred EecCCCceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhccc
Q 003189 514 VIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDK 593 (840)
Q Consensus 514 ~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~ 593 (840)
+ ..+.+|.|++.... ++.+.+..++.++..|||+..||....+..++|..+...|||||.|++.|+.
T Consensus 373 e---------n~DAID~A~v~~L~----dPKeara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~ 439 (942)
T KOG0205|consen 373 E---------NQDAIDAAIVGMLA----DPKEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNE 439 (942)
T ss_pred c---------ChhhHHHHHHHhhc----CHHHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhc
Confidence 1 34789999987654 3578888999999999999999999999999999999999999999999973
Q ss_pred ccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcchHHHHHHHH
Q 003189 594 FLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICR 673 (840)
Q Consensus 594 ~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~ 673 (840)
+.+.++.+.+.+++|+++|+|.+++|++..++... +.....+.|+|+.-+-||+|.+..++|++..
T Consensus 440 -----------~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~---~~~g~pw~~~gllp~fdpprhdsa~tirral 505 (942)
T KOG0205|consen 440 -----------DHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTK---ESPGGPWEFVGLLPLFDPPRHDSAETIRRAL 505 (942)
T ss_pred -----------cCcchHHHHHHHHHHHHhcchhhhhhhhccccccc---cCCCCCcccccccccCCCCccchHHHHHHHH
Confidence 34566788999999999999999999998776422 3344668899999999999999999999999
Q ss_pred hCCCEEEEEcCCCHHHHHHHHHHcCCccC--CCccccChhhh-cCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCC
Q 003189 674 SAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFR-EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLG 750 (840)
Q Consensus 674 ~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~--~~~~~~g~~~~-~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g 750 (840)
..|++|.|+|||...-++..++++|+-+. ++..+-|..-. ++.-.+..+.+.+..-||.+.|++|+.+|+.||++ |
T Consensus 506 ~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r-~ 584 (942)
T KOG0205|consen 506 NLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQER-K 584 (942)
T ss_pred hccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhc-C
Confidence 99999999999999999999999998542 11111121111 12223345555566689999999999999999999 9
Q ss_pred CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 751 EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVV 826 (840)
Q Consensus 751 ~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~ 826 (840)
|.++|+|||+||+|+|+.||+|||+. .++|.|+.+||||+++..++.|+.++..+|.+|++++.+..|++...+-
T Consensus 585 hi~gmtgdgvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsitir 659 (942)
T KOG0205|consen 585 HIVGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 659 (942)
T ss_pred ceecccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHH
Confidence 99999999999999999999999999 9999999999999999999999999999999999999998887665543
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-80 Score=717.26 Aligned_cols=535 Identities=27% Similarity=0.384 Sum_probs=426.7
Q ss_pred CccHHHHHHHHHhhhHHHH--HHHHHH-HHHHhhh---ccc-----CCCCCcchhHHHHHHHHHH-HHHHHHHHHHHHHH
Q 003189 160 ARGFWVYVWEALHDMTLMI--LAVCAL-VSLVVGI---ATE-----GWPKGAHDGLGIVMSILLV-VFVTATSDYKQSLQ 227 (840)
Q Consensus 160 ~~~f~~~~~~~l~~~~~~i--l~i~a~-is~~~~~---~~~-----~~~~~~~d~~~i~~~illv-~~v~~~~~~~~~~~ 227 (840)
+.||++.+|+.++...+.+ |+..++ .+++++. ... +..++||++++++++++++ -.+....+++.++.
T Consensus 2 g~~~~~~a~~~l~~~~~~md~l~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~le~~~~~~a~~~ 81 (562)
T TIGR01511 2 GRPFYKSAWKALRHKAPNMDTLIALGTTVAYGYSLVALLANQVLTGLHVHTFFDASAMLITFILLGRWLEMLAKGRASDA 81 (562)
T ss_pred cHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5689999999998665433 222222 2233222 111 1235789988876665554 12232333333333
Q ss_pred HhHhHhhhcCceEEEEEC-CeEEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecccccCCCCccccCCCCCeEE
Q 003189 228 FKDLDREKKKITVQVARN-GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLL 306 (840)
Q Consensus 228 ~~~l~~~~~~~~v~V~Rd-G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv~k~~~~~~l~ 306 (840)
.++|.+ ..+..++|+|+ |.+++|++++|+|||+|.|++||+|||||++++|++ .||||+|||||.|+.|..++. ||
T Consensus 82 ~~~L~~-~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~~-~vdes~lTGEs~pv~k~~gd~-V~ 158 (562)
T TIGR01511 82 LSKLAK-LQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGES-EVDESLVTGESLPVPKKVGDP-VI 158 (562)
T ss_pred HHHHHh-cCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEECce-EEehHhhcCCCCcEEcCCCCE-EE
Confidence 334443 34568888885 777999999999999999999999999999999985 999999999999999998875 99
Q ss_pred eccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCc
Q 003189 307 SGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTH 386 (840)
Q Consensus 307 sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~ 386 (840)
+||.+.+|+++++|+++|.+|.+|+|.+++.+++.+++|+|+.++++++++.++++++++++|++|.
T Consensus 159 aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~------------- 225 (562)
T TIGR01511 159 AGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL------------- 225 (562)
T ss_pred eeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------
Confidence 9999999999999999999999999999999999999999999999999999999999888887652
Q ss_pred cccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCce
Q 003189 387 WTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHM 466 (840)
Q Consensus 387 ~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m 466 (840)
..+..++++++++|||+|++++|+++..++.+++++|+++|+++++|+|+++|+||||||||||+|+|
T Consensus 226 ------------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~ 293 (562)
T TIGR01511 226 ------------FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKP 293 (562)
T ss_pred ------------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCE
Confidence 25677999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHcCCChHHH
Q 003189 467 TVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAE 546 (840)
Q Consensus 467 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~ 546 (840)
+|.++...+... .++.+.+. ... + ..+.||+++|+++++.+.+.+...
T Consensus 294 ~v~~i~~~~~~~---------------~~~~l~~a---a~~------e-------~~s~HPia~Ai~~~~~~~~~~~~~- 341 (562)
T TIGR01511 294 TVTDVHVFGDRD---------------RTELLALA---AAL------E-------AGSEHPLAKAIVSYAKEKGITLVE- 341 (562)
T ss_pred EEEEEecCCCCC---------------HHHHHHHH---HHH------h-------ccCCChHHHHHHHHHHhcCCCcCC-
Confidence 999986543210 11222221 111 1 126799999999999776543211
Q ss_pred hhccceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccce
Q 003189 547 RQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRT 626 (840)
Q Consensus 547 ~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~ 626 (840)
..-.+.+| ..++....++.. +..|+++.+.+ ++. .++ .+.++|.++
T Consensus 342 ---~~~~~~~~------g~Gi~~~~~g~~---~~iG~~~~~~~--------~~~--~~~------------~~~~~g~~~ 387 (562)
T TIGR01511 342 ---VSDFKAIP------GIGVEGTVEGTK---IQLGNEKLLGE--------NAI--KID------------GKAEQGSTS 387 (562)
T ss_pred ---CCCeEEEC------CceEEEEECCEE---EEEECHHHHHh--------CCC--CCC------------hhhhCCCEE
Confidence 00011111 112222222222 33477665432 111 111 123578888
Q ss_pred eEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCcc
Q 003189 627 LCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA 706 (840)
Q Consensus 627 l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~ 706 (840)
+.++ .+.+++|++.++|++||+++++|++|++.|+++.|+|||+..++.++++++||.
T Consensus 388 ~~~~----------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~------ 445 (562)
T TIGR01511 388 VLVA----------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN------ 445 (562)
T ss_pred EEEE----------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc------
Confidence 7775 467899999999999999999999999999999999999999999999999993
Q ss_pred ccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhh
Q 003189 707 IEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKES 786 (840)
Q Consensus 707 ~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~ 786 (840)
++++..|++|..+++.++++ |+.|+|+|||.||+||++.||+||+|| .+++.+++.
T Consensus 446 ----------------------~~~~~~p~~K~~~v~~l~~~-~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~ 501 (562)
T TIGR01511 446 ----------------------VRAEVLPDDKAALIKELQEK-GRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEA 501 (562)
T ss_pred ----------------------EEccCChHHHHHHHHHHHHc-CCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhh
Confidence 78889999999999999998 999999999999999999999999999 899999999
Q ss_pred cCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 787 ADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSS 834 (840)
Q Consensus 787 aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~ 834 (840)
||+++++|++..|.+++++||+++++|++|+.|+++||++++++++.+
T Consensus 502 Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~~ 549 (562)
T TIGR01511 502 ADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGV 549 (562)
T ss_pred CCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999998743
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-79 Score=713.32 Aligned_cols=512 Identities=28% Similarity=0.379 Sum_probs=428.3
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEECC-eEEEEeccCCCCCcEEEecCCCcccccEEEEe
Q 003189 200 AHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNG-FRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 278 (840)
Q Consensus 200 ~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~RdG-~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~ 278 (840)
|.++..+++.+++..++....+++.++..++|.+ ..+..++|+||| ++++|+.+||+|||+|.+++||+|||||++++
T Consensus 18 ~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~-~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~ 96 (556)
T TIGR01525 18 VLEGALLLFLFLLGETLEERAKGRASDALSALLA-LAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVIS 96 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEEe
Confidence 6677766666666666666666666666666654 445689999995 99999999999999999999999999999999
Q ss_pred ecceEEecccccCCCCccccCCCCCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCCCChHHHHHHHHHHHHH
Q 003189 279 GFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIG 358 (840)
Q Consensus 279 g~~l~VDES~LTGES~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~ 358 (840)
|+ +.||||+|||||.|+.|.+++ .+|+||.+.+|+++++|+++|.+|++|++.+++.+...+++|+|+.+++++.++.
T Consensus 97 g~-~~vdes~lTGEs~pv~k~~g~-~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~ 174 (556)
T TIGR01525 97 GE-SEVDESALTGESMPVEKKEGD-EVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYV 174 (556)
T ss_pred cc-eEEeehhccCCCCCEecCCcC-EEeeceEECCceEEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHH
Confidence 97 599999999999999999876 5999999999999999999999999999999999888889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhcccccc
Q 003189 359 KIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALV 438 (840)
Q Consensus 359 ~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilv 438 (840)
++++++++++|++|+.... . ..+..++++++++|||+||+++|++++.++++|.++|+++
T Consensus 175 ~~~l~~a~~~~~~~~~~~~------------------~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilv 234 (556)
T TIGR01525 175 PAVLAIALLTFVVWLALGA------------------L--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILI 234 (556)
T ss_pred HHHHHHHHHHHHHHHHhcc------------------c--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCcee
Confidence 9999999999887653210 0 5678899999999999999999999999999999999999
Q ss_pred ccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCC
Q 003189 439 RHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEG 518 (840)
Q Consensus 439 r~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 518 (840)
|+++++|+||++|++|||||||||+|+|+|.+++..+... ...++.+.+ +... +
T Consensus 235 k~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-------------~~~~~~l~~---a~~~------e---- 288 (556)
T TIGR01525 235 KGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS-------------ISEEELLAL---AAAL------E---- 288 (556)
T ss_pred cCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC-------------ccHHHHHHH---HHHH------h----
Confidence 9999999999999999999999999999999987643220 001122221 1111 1
Q ss_pred CceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccC
Q 003189 519 NKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSN 598 (840)
Q Consensus 519 ~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~ 598 (840)
..+.||+++|+++++.+.+.+... +| . ....++.++..+++|+++..+..|+.. ..+
T Consensus 289 ---~~~~hp~~~Ai~~~~~~~~~~~~~-----------~~--~------~~~~~~~gi~~~~~g~~~~~lg~~~~~-~~~ 345 (556)
T TIGR01525 289 ---QSSSHPLARAIVRYAKKRGLELPK-----------QE--D------VEEVPGKGVEATVDGQEEVRIGNPRLL-ELA 345 (556)
T ss_pred ---ccCCChHHHHHHHHHHhcCCCccc-----------cc--C------eeEecCCeEEEEECCeeEEEEecHHHH-hhc
Confidence 126799999999999877654211 11 0 012234456666666656666666532 111
Q ss_pred CceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCC-C
Q 003189 599 GEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAG-I 677 (840)
Q Consensus 599 g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aG-i 677 (840)
+.. ...+++.++.++.+|+|++.++ .|.+++|.+.++|++||+++++++.|+++| +
T Consensus 346 ~~~-------~~~~~~~~~~~~~~g~~~~~v~----------------~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i 402 (556)
T TIGR01525 346 AEP-------ISASPDLLNEGESQGKTVVFVA----------------VDGELLGVIALRDQLRPEAKEAIAALKRAGGI 402 (556)
T ss_pred CCC-------chhhHHHHHHHhhCCcEEEEEE----------------ECCEEEEEEEecccchHhHHHHHHHHHHcCCC
Confidence 111 1112345667888999999887 346899999999999999999999999999 9
Q ss_pred EEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEc
Q 003189 678 TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTG 757 (840)
Q Consensus 678 ~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~G 757 (840)
++.|+|||+..++.++++++|+.. +|++..|++|..+++.++.. |+.|+|+|
T Consensus 403 ~v~ivTgd~~~~a~~i~~~lgi~~---------------------------~f~~~~p~~K~~~v~~l~~~-~~~v~~vG 454 (556)
T TIGR01525 403 KLVMLTGDNRSAAEAVAAELGIDE---------------------------VHAELLPEDKLAIVKELQEE-GGVVAMVG 454 (556)
T ss_pred eEEEEeCCCHHHHHHHHHHhCCCe---------------------------eeccCCHHHHHHHHHHHHHc-CCEEEEEE
Confidence 999999999999999999999964 89999999999999999988 89999999
Q ss_pred CCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003189 758 DGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSA 835 (840)
Q Consensus 758 DG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~~ 835 (840)
||.||+||+++||+|++|| .+++.+++.||+++.+|+++.|++++++||+++.||++|+.|+++||++++++++.+.
T Consensus 455 Dg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g~ 531 (556)
T TIGR01525 455 DGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGL 531 (556)
T ss_pred CChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999 8999999999999999999999999999999999999999999999999999998664
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-78 Score=702.30 Aligned_cols=480 Identities=39% Similarity=0.601 Sum_probs=424.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhHh-hhcCceEEEEECCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecc
Q 003189 209 SILLVVFVTATSDYKQSLQFKDLDR-EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINES 287 (840)
Q Consensus 209 ~illv~~v~~~~~~~~~~~~~~l~~-~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES 287 (840)
++++..++..+.+++.++..+++.+ ..++..++|+|+| +++|++++|+|||+|.+++||+|||||++++|+ +.||||
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~-~~vdes 82 (499)
T TIGR01494 5 LVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGS-CFVDES 82 (499)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEcc-EEEEcc
Confidence 4456666777778888888888876 3567799999999 999999999999999999999999999999995 699999
Q ss_pred cccCCCCccccCCCCCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCCCChHHHHHHHHH-HHHHHHHHHHHH
Q 003189 288 SLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA-TIIGKIGLFFAV 366 (840)
Q Consensus 288 ~LTGES~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a-~~~~~~~l~~a~ 366 (840)
+|||||.|+.|.+++. +++||.+.+|++++.|+.+|.+|..+++...+.++...++|+++++++++ .++.++.+++++
T Consensus 83 ~LTGEs~pv~k~~g~~-v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~ 161 (499)
T TIGR01494 83 NLTGESVPVLKTAGDA-VFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIAL 161 (499)
T ss_pred cccCCCCCeeeccCCc-cccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998776 99999999999999999999999999999999888877899999999999 788888888888
Q ss_pred HHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhccccccccchhhhc
Q 003189 367 VTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACET 446 (840)
Q Consensus 367 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~ 446 (840)
+++++|+..+.. .. .+...+..++++++++|||+||+++|+++..+..+|.++|+++|+++++|+
T Consensus 162 ~~~~~~~~~~~~------------~~---~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~ 226 (499)
T TIGR01494 162 AVFLFWAIGLWD------------PN---SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEE 226 (499)
T ss_pred HHHHHHHHHHcc------------cc---cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhh
Confidence 888776532210 00 245778999999999999999999999999999999999999999999999
Q ss_pred cCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceeEcCC
Q 003189 447 MGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGT 526 (840)
Q Consensus 447 lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~ 526 (840)
||+++++|||||||||+|+|+|.++++.+. ...++|
T Consensus 227 l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~--------------------------------------------~~~s~h 262 (499)
T TIGR01494 227 LGKVDYICSDKTGTLTKNEMSFKKVSVLGG--------------------------------------------EYLSGH 262 (499)
T ss_pred ccCCcEEEeeCCCccccCceEEEEEEecCC--------------------------------------------CcCCCC
Confidence 999999999999999999999998865321 012789
Q ss_pred hhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCceeeCCH
Q 003189 527 PTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNE 606 (840)
Q Consensus 527 p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~ 606 (840)
|+|.|+++++.... ++..||++.+++|+++++.+++ .++||+++.+++.|..
T Consensus 263 p~~~ai~~~~~~~~------------~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~------------- 314 (499)
T TIGR01494 263 PDERALVKSAKWKI------------LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD------------- 314 (499)
T ss_pred hHHHHHHHHhhhcC------------cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH-------------
Confidence 99999999886421 2468999999999998875333 4789999999988852
Q ss_pred HHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCC
Q 003189 607 AAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDN 686 (840)
Q Consensus 607 ~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~ 686 (840)
+.+..+.++.+|+|++++|++ .+++|+++++|++||+++++|+.|+++|++++|+|||+
T Consensus 315 -----~~~~~~~~~~~g~~~~~~a~~----------------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~ 373 (499)
T TIGR01494 315 -----LEEKVKELAQSGLRVLAVASK----------------ETLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDN 373 (499)
T ss_pred -----HHHHHHHHHhCCCEEEEEEEC----------------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCC
Confidence 123344677899999999964 26899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHh
Q 003189 687 INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL 766 (840)
Q Consensus 687 ~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al 766 (840)
..+|..+|+++|| +++++|+||.++|+.+|+. |+.|+|+|||.||+|||
T Consensus 374 ~~~a~~ia~~lgi------------------------------~~~~~p~~K~~~v~~l~~~-g~~v~~vGDg~nD~~al 422 (499)
T TIGR01494 374 VLTAKAIAKELGI------------------------------FARVTPEEKAALVEALQKK-GRVVAMTGDGVNDAPAL 422 (499)
T ss_pred HHHHHHHHHHcCc------------------------------eeccCHHHHHHHHHHHHHC-CCEEEEECCChhhHHHH
Confidence 9999999999986 5789999999999999998 99999999999999999
Q ss_pred hhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 003189 767 HEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSAC 836 (840)
Q Consensus 767 ~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~~~ 836 (840)
++|||||+|| ++++||++|++|++..++.++++||+++.++++|+.|.++||++.+++++.+.+
T Consensus 423 ~~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~~ 486 (499)
T TIGR01494 423 KKADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALLAV 486 (499)
T ss_pred HhCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999997 689999999999999999999999999999999999999999999999887653
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-78 Score=737.60 Aligned_cols=653 Identities=22% Similarity=0.281 Sum_probs=482.0
Q ss_pred hccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChhhhh--hh--hcc---CChhHH
Q 003189 43 ANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELG--SI--VEG---HDIKKL 115 (840)
Q Consensus 43 ~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~--~~~---~~~~~l 115 (840)
..|....|+.....+++..+++++.+.+..+.. ......+.+.++..||.+.+.+.. .. .++ ++.+.+
T Consensus 111 a~Ca~~Ie~~L~~~~GV~~a~vnl~t~~~~V~~-----~~s~~~I~~~I~~~Gy~a~~~~~~~~~~~~~~~~~~~~~~~~ 185 (834)
T PRK10671 111 ASCVSRVQNALQSVPGVTQARVNLAERTALVMG-----SASPQDLVQAVEKAGYGAEAIEDDAKRRERQQETAQATMKRF 185 (834)
T ss_pred HHHHHHHHHHHhcCCCceeeeeecCCCeEEEEc-----cCCHHHHHHHHHhcCCCccccccccchhhhhhhhhHHHHHHH
Confidence 356666777777777888888888776655541 122234445567788877542210 00 000 111122
Q ss_pred HHhcCHHHHHHHhCCCc-CCC----CCccHHHHHHHHHhc-CCCCCCCCCCccHHHHHHHHHhhhHHHH--HHHHHH-HH
Q 003189 116 KVHGGVEGIAEKLSTSI-TDG----ISTSEHLLNRRKEIY-GINKFTESPARGFWVYVWEALHDMTLMI--LAVCAL-VS 186 (840)
Q Consensus 116 ~~~~gv~~l~~~l~~~~-~~G----l~~~~~~~~~r~~~~-G~N~~~~~~~~~f~~~~~~~l~~~~~~i--l~i~a~-is 186 (840)
....++..+..+..+-+ ..| +.... ...+...+ -.-......+++|++.+|++++.....| |+..++ .+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~a~~~l~~~~~~md~l~~l~~~~a 263 (834)
T PRK10671 186 RWQAIVALAVGIPVMVWGMIGDNMMVTADN--RSLWLVIGLITLAVMVFAGGHFYRSAWKSLLNGSATMDTLVALGTGAA 263 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCccc--hhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence 22222333332100000 001 11110 00111000 0000001247789999999998655432 222222 23
Q ss_pred HHhhh----c----ccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHh------hhcCceEEEEECCeEEEEe
Q 003189 187 LVVGI----A----TEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR------EKKKITVQVARNGFRRKIS 252 (840)
Q Consensus 187 ~~~~~----~----~~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~------~~~~~~v~V~RdG~~~~I~ 252 (840)
+++++ . ..+..+.|||..+++++++++ ++|.+++...+..+ ...+..++|+|||++++|+
T Consensus 264 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~ 337 (834)
T PRK10671 264 WLYSMSVNLWPQWFPMEARHLYYEASAMIIGLINL------GHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVP 337 (834)
T ss_pred HHHHHHHHHhhcccccccchhhHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEE
Confidence 33322 1 111124588877766554443 56666555443222 2456689999999999999
Q ss_pred ccCCCCCcEEEecCCCcccccEEEEeecceEEecccccCCCCccccCCCCCeEEeccEEeeceEEEEEEEEcccchHHHH
Q 003189 253 IYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKL 332 (840)
Q Consensus 253 ~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i 332 (840)
+++|+|||+|.|++||+|||||+|++|+ ..||||+|||||.|+.|..++. ||+||.|.+|+++++|+++|.+|.+|+|
T Consensus 338 ~~~l~~GD~v~v~~G~~iP~Dg~v~~g~-~~vdeS~lTGEs~pv~k~~gd~-V~aGt~~~~G~~~~~v~~~g~~t~l~~i 415 (834)
T PRK10671 338 LADVQPGMLLRLTTGDRVPVDGEITQGE-AWLDEAMLTGEPIPQQKGEGDS-VHAGTVVQDGSVLFRASAVGSHTTLSRI 415 (834)
T ss_pred HHHcCCCCEEEEcCCCEeeeeEEEEEce-EEEeehhhcCCCCCEecCCCCE-EEecceecceeEEEEEEEEcCcChHHHH
Confidence 9999999999999999999999999996 5999999999999999998875 9999999999999999999999999999
Q ss_pred HHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhc
Q 003189 333 MATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAV 412 (840)
Q Consensus 333 ~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~ 412 (840)
.+++++++..++|+|+.+++++.++++++++++++++++|+.. +. ...+...+..++++++++|
T Consensus 416 ~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~--------~~--------~~~~~~~~~~a~~vlv~ac 479 (834)
T PRK10671 416 IRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFF--------GP--------APQIVYTLVIATTVLIIAC 479 (834)
T ss_pred HHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------CC--------chHHHHHHHHHHHHHHHhc
Confidence 9999999888999999999999999999999999988887431 00 0124556788999999999
Q ss_pred CCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCC
Q 003189 413 PEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSS 492 (840)
Q Consensus 413 P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~ 492 (840)
||+|++++|+++..++.+++++|+|+|+++++|+|+++|++|||||||||+|+|+|.+++..+..
T Consensus 480 PcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~--------------- 544 (834)
T PRK10671 480 PCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGV--------------- 544 (834)
T ss_pred ccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCC---------------
Confidence 99999999999999999999999999999999999999999999999999999999987653321
Q ss_pred CChhHHHHHHHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeC
Q 003189 493 IPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP 572 (840)
Q Consensus 493 ~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~ 572 (840)
++ .+++..+...++. +.||+++|+++++...... ...+|..... .++....+
T Consensus 545 -~~--~~~l~~a~~~e~~-------------s~hp~a~Ai~~~~~~~~~~-----------~~~~~~~~~g-~Gv~~~~~ 596 (834)
T PRK10671 545 -DE--AQALRLAAALEQG-------------SSHPLARAILDKAGDMTLP-----------QVNGFRTLRG-LGVSGEAE 596 (834)
T ss_pred -CH--HHHHHHHHHHhCC-------------CCCHHHHHHHHHHhhCCCC-----------CcccceEecc-eEEEEEEC
Confidence 11 1222222222221 6799999999987533211 1122322221 22222222
Q ss_pred CCcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeee
Q 003189 573 EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCI 652 (840)
Q Consensus 573 ~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~l 652 (840)
+. .++.|+++.+.... +. ...+.+.++.+..+|.+++.+++ +..++
T Consensus 597 g~---~~~~G~~~~~~~~~------------~~---~~~~~~~~~~~~~~g~~~v~va~----------------~~~~~ 642 (834)
T PRK10671 597 GH---ALLLGNQALLNEQQ------------VD---TKALEAEITAQASQGATPVLLAV----------------DGKAA 642 (834)
T ss_pred CE---EEEEeCHHHHHHcC------------CC---hHHHHHHHHHHHhCCCeEEEEEE----------------CCEEE
Confidence 22 24569988764311 11 12355667778889999998874 45789
Q ss_pred eeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEe
Q 003189 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR 732 (840)
Q Consensus 653 g~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar 732 (840)
|++.+.|++||+++++|++|++.|+++.|+|||+..++.++++++||.. ++++
T Consensus 643 g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~---------------------------~~~~ 695 (834)
T PRK10671 643 ALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE---------------------------VIAG 695 (834)
T ss_pred EEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE---------------------------EEeC
Confidence 9999999999999999999999999999999999999999999999964 8999
Q ss_pred cCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHH
Q 003189 733 SSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYIN 812 (840)
Q Consensus 733 ~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~ 812 (840)
..|++|.++++.++.+ |+.|+|+|||.||+|||+.||+||+|| +|++.++++||+++++|++..|.+++++||+++.|
T Consensus 696 ~~p~~K~~~i~~l~~~-~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~ 773 (834)
T PRK10671 696 VLPDGKAEAIKRLQSQ-GRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRN 773 (834)
T ss_pred CCHHHHHHHHHHHhhc-CCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999988 999999999999999999999999999 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 003189 813 IQKFVQFQLTVNVVALIVNF 832 (840)
Q Consensus 813 i~k~i~f~l~~N~~~l~~~~ 832 (840)
|++|+.|++.||++++++++
T Consensus 774 i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 774 MKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999986
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-77 Score=695.78 Aligned_cols=503 Identities=27% Similarity=0.347 Sum_probs=417.9
Q ss_pred HHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEECCeEEEEeccCCCC
Q 003189 179 LAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLP 258 (840)
Q Consensus 179 l~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~RdG~~~~I~~~dLvv 258 (840)
+.++++++++++ .|+|+..+++.+++..++....+++.++..++|.+ ..+.+++|+|||++++|++++|+|
T Consensus 5 ~~~a~~~~~~~~--------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~-~~~~~~~v~r~g~~~~i~~~~l~~ 75 (536)
T TIGR01512 5 MALAALGAVAIG--------EYLEGALLLLLFSIGETLEEYASGRARRALKALME-LAPDTARVLRGGSLEEVAVEELKV 75 (536)
T ss_pred HHHHHHHHHHHh--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEEECCEEEEEEHHHCCC
Confidence 445555666554 48999777766666666666666666666666655 456689999999999999999999
Q ss_pred CcEEEecCCCcccccEEEEeecceEEecccccCCCCccccCCCCCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcC
Q 003189 259 GDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSE 338 (840)
Q Consensus 259 GDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~ 338 (840)
||+|.+++||+|||||++++|+ +.||||+|||||.|+.|.+++ .+|+||.+.+|+++++|+++|.+|.+|++.+++.+
T Consensus 76 GDiv~v~~G~~iP~Dg~ii~g~-~~vdes~lTGEs~pv~k~~g~-~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~ 153 (536)
T TIGR01512 76 GDVVVVKPGERVPVDGVVLSGT-STVDESALTGESVPVEKAPGD-EVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEE 153 (536)
T ss_pred CCEEEEcCCCEeecceEEEeCc-EEEEecccCCCCCcEEeCCCC-EEEeeeEECCceEEEEEEEeccccHHHHHHHHHHH
Confidence 9999999999999999999997 499999999999999999876 59999999999999999999999999999999998
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHH
Q 003189 339 GGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPL 418 (840)
Q Consensus 339 ~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lpl 418 (840)
...+++|+|+.+++++.+++++.+.++++++++|... . . +...+..++++++++|||+||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------------~----~~~~~~~~~svlv~~~P~aL~l 214 (536)
T TIGR01512 154 AQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLL---K------------R----WPFWVYRALVLLVVASPCALVI 214 (536)
T ss_pred HhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---c------------c----cHHHHHHHHHHHhhcCcccccc
Confidence 8888999999999999999999998888877765321 0 0 1126778899999999999999
Q ss_pred HHHHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHH
Q 003189 419 AVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASAS 498 (840)
Q Consensus 419 av~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (840)
++|+++..++++|.++|+++|+++++|++|++|++|||||||||+|+|+|.+++.. +.+
T Consensus 215 a~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---------------------~~l 273 (536)
T TIGR01512 215 SAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA---------------------EVL 273 (536)
T ss_pred chHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH---------------------HHH
Confidence 99999999999999999999999999999999999999999999999999886421 122
Q ss_pred HHHHHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCce--EEEEEEeCCCcE
Q 003189 499 KLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQ--MGVVIELPEGGF 576 (840)
Q Consensus 499 ~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~--~~vv~~~~~~~~ 576 (840)
.. +... + ..+.||+++|+++++.+.+ ||++.+.. .++.....+..+
T Consensus 274 ~~---a~~~------e-------~~~~hp~~~Ai~~~~~~~~----------------~~~~~~~~~g~gi~~~~~g~~~ 321 (536)
T TIGR01512 274 RL---AAAA------E-------QASSHPLARAIVDYARKRE----------------NVESVEEVPGEGVRAVVDGGEV 321 (536)
T ss_pred HH---HHHH------h-------ccCCCcHHHHHHHHHHhcC----------------CCcceEEecCCeEEEEECCeEE
Confidence 22 1111 1 1267999999999987553 12222111 122222222222
Q ss_pred EEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeec
Q 003189 577 RVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVG 656 (840)
Q Consensus 577 ~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~ 656 (840)
..|+++.+.+. + . ..+..+|.+++.++ .|..++|.+.
T Consensus 322 ---~ig~~~~~~~~--------~----~------------~~~~~~~~~~~~v~----------------~~~~~~g~i~ 358 (536)
T TIGR01512 322 ---RIGNPRSLEAA--------V----G------------ARPESAGKTIVHVA----------------RDGTYLGYIL 358 (536)
T ss_pred ---EEcCHHHHhhc--------C----C------------cchhhCCCeEEEEE----------------ECCEEEEEEE
Confidence 23766543221 1 0 03455676766554 4678999999
Q ss_pred ccCCCCcchHHHHHHHHhCCC-EEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCc
Q 003189 657 IKDPMRPGVKESVAICRSAGI-TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (840)
Q Consensus 657 ~~D~lR~~~~~aI~~l~~aGi-~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (840)
++|++||+++++|++|+++|+ ++.|+|||+..++.++++++||.. +|++..|
T Consensus 359 ~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~---------------------------~f~~~~p 411 (536)
T TIGR01512 359 LSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE---------------------------VHAELLP 411 (536)
T ss_pred EeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh---------------------------hhhccCc
Confidence 999999999999999999999 999999999999999999999964 8889999
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQK 815 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k 815 (840)
++|..+++.++.. ++.|+|+|||.||+||++.||+|++||.++++.+++.||+++++|++..+.+++++||+++.||++
T Consensus 412 ~~K~~~i~~l~~~-~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~ 490 (536)
T TIGR01512 412 EDKLEIVKELREK-YGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQ 490 (536)
T ss_pred HHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998 999999999999999999999999999668999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 003189 816 FVQFQLTVNVVALIVNFSSA 835 (840)
Q Consensus 816 ~i~f~l~~N~~~l~~~~~~~ 835 (840)
|+.|++.||++++++++++.
T Consensus 491 nl~~a~~~n~~~i~~a~~G~ 510 (536)
T TIGR01512 491 NVVIALGIILLLILLALFGV 510 (536)
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999998763
|
. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-69 Score=592.04 Aligned_cols=581 Identities=25% Similarity=0.338 Sum_probs=442.5
Q ss_pred CCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHH
Q 003189 134 DGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLV 213 (840)
Q Consensus 134 ~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv 213 (840)
.|.. ++.++..-...||.|.+..+ .++|-.++.+.-..|++.+..+|..+++.- +.||-++.. ++++
T Consensus 161 ~G~~-~~~~i~~a~~~~G~N~fdi~-vPtF~eLFkE~A~aPfFVFQVFcvgLWCLD--------eyWYySlFt---LfMl 227 (1160)
T KOG0209|consen 161 TGHE-EESEIKLAKHKYGKNKFDIV-VPTFSELFKEHAVAPFFVFQVFCVGLWCLD--------EYWYYSLFT---LFML 227 (1160)
T ss_pred cCcc-hHHHHHHHHHHhcCCccccC-CccHHHHHHHhccCceeeHhHHhHHHHHhH--------HHHHHHHHH---HHHH
Confidence 5776 44456666667999999654 567999999999999888887777766542 257766543 3445
Q ss_pred HHHHHHHHHHHHHHHhHhHhh-hcCceEEEEECCeEEEEeccCCCCCcEEEecCC---CcccccEEEEeecceEEecccc
Q 003189 214 VFVTATSDYKQSLQFKDLDRE-KKKITVQVARNGFRRKISIYDLLPGDIVHLCMG---DQVPADGLFVSGFSVLINESSL 289 (840)
Q Consensus 214 ~~v~~~~~~~~~~~~~~l~~~-~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~G---d~VPaDgvll~g~~l~VDES~L 289 (840)
+.+.+..-+++.+....+.+. .++..+.|+|+++|+.+..+||+|||+|.+..| ..||||.+++.|+ |.|||++|
T Consensus 228 i~fE~tlV~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gs-ciVnEaML 306 (1160)
T KOG0209|consen 228 IAFEATLVKQRMRTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGS-CIVNEAML 306 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecc-eeechhhh
Confidence 555666666666666666653 356689999999999999999999999999874 5799999999995 89999999
Q ss_pred cCCCCccccC----------------CCCCeEEeccEEe-------------eceEEEEEEEEcccchHHHHHHhhcCCC
Q 003189 290 TGESEPVNVN----------------ALNPFLLSGTKVQ-------------NGSCKMLVTTVGMRTQWGKLMATLSEGG 340 (840)
Q Consensus 290 TGES~pv~k~----------------~~~~~l~sGt~v~-------------~G~~~~~V~~vG~~T~~g~i~~~~~~~~ 340 (840)
||||.|..|. .+..++|.||+++ +|.+.+.|++||.+|..|++++.+....
T Consensus 307 tGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~a 386 (1160)
T KOG0209|consen 307 TGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSA 386 (1160)
T ss_pred cCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecc
Confidence 9999999884 1345799999997 6889999999999999999999988766
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhccc-CCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHH
Q 003189 341 DDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQ-EGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLA 419 (840)
Q Consensus 341 ~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lpla 419 (840)
++-|.-.. =+.+| ++.+++|.+....|.+.... ++. .+=.+.|.-++-|+...+|.-||+-
T Consensus 387 ervTaNn~----Etf~F-----ILFLlVFAiaAa~Yvwv~Gskd~~---------RsrYKL~LeC~LIlTSVvPpELPmE 448 (1160)
T KOG0209|consen 387 ERVTANNR----ETFIF-----ILFLLVFAIAAAGYVWVEGSKDPT---------RSRYKLFLECTLILTSVVPPELPME 448 (1160)
T ss_pred eeeeeccH----HHHHH-----HHHHHHHHHHhhheEEEecccCcc---------hhhhheeeeeeEEEeccCCCCCchh
Confidence 55443221 12222 23334444444444332211 110 1112334556667777899999999
Q ss_pred HHHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHH
Q 003189 420 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASK 499 (840)
Q Consensus 420 v~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (840)
++++.-.+...|.|.+++|..+-.+.-.|++|..|||||||||+..|.|..+.-.... .+.....+..+.+...
T Consensus 449 LSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~------~~~~~~~s~~p~~t~~ 522 (1160)
T KOG0209|consen 449 LSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSAD------EGALTPASKAPNETVL 522 (1160)
T ss_pred hhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCC------cccccchhhCCchHHH
Confidence 9999999999999999999999999999999999999999999999999887542211 1111122333444443
Q ss_pred HHHHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHc--CCC----hHHHhhccceEEEecCCCCCceEEEEEEeCC
Q 003189 500 LLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL--GGD----FQAERQASKIVKVEPFNSVKKQMGVVIELPE 573 (840)
Q Consensus 500 ~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~--~~~----~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~ 573 (840)
.+ +.||+-.. .+ + ...|+|.|+|.+++.... ..+ .+..-+..+|.+.+.|+|.-|||+++....+
T Consensus 523 vl----AscHsLv~-le-~---~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~ 593 (1160)
T KOG0209|consen 523 VL----ASCHSLVL-LE-D---KLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQG 593 (1160)
T ss_pred HH----HHHHHHHH-hc-C---cccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhccc
Confidence 33 33332211 11 1 268999999999875211 001 1111125778999999999999999987543
Q ss_pred ----CcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCC-----CCCCCC
Q 003189 574 ----GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF-----SADAPI 644 (840)
Q Consensus 574 ----~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~-----~~~~~~ 644 (840)
.++.+.+|||||.|-.+-. +....+++...+|+++|.||+|++||++..-. ..+++.
T Consensus 594 ~g~s~k~~~aVKGAPEvi~~ml~--------------dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~ 659 (1160)
T KOG0209|consen 594 PGSSEKYFVAVKGAPEVIQEMLR--------------DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKRED 659 (1160)
T ss_pred CCCceEEEEEecCCHHHHHHHHH--------------hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhh
Confidence 3578889999999977643 23456788899999999999999999997431 234567
Q ss_pred CCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC---------------------
Q 003189 645 PTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--------------------- 703 (840)
Q Consensus 645 ~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~--------------------- 703 (840)
.|++++|.|++.|.-|+|||++++|+.|++.+++++|+||||+.||.++|+++||....
T Consensus 660 vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d 739 (1160)
T KOG0209|consen 660 VESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVD 739 (1160)
T ss_pred hhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCC
Confidence 89999999999999999999999999999999999999999999999999999997531
Q ss_pred --------------------CccccChhhhcCC-HHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccC
Q 003189 704 --------------------GIAIEGPEFREKS-DEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTND 762 (840)
Q Consensus 704 --------------------~~~~~g~~~~~~~-~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND 762 (840)
+++++|..+..+. .+.+.++++++.||||+.|.||..++..|++. |+.++|+|||+||
T Consensus 740 ~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~-Gy~TLMCGDGTND 818 (1160)
T KOG0209|consen 740 GTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKL-GYVTLMCGDGTND 818 (1160)
T ss_pred CceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhc-CeEEEEecCCCcc
Confidence 1456677766543 34678889999999999999999999999998 9999999999999
Q ss_pred HHHhhhCCccEEec
Q 003189 763 APALHEADIGLAMG 776 (840)
Q Consensus 763 ~~al~~Advgiamg 776 (840)
..|||+||||||+=
T Consensus 819 VGALK~AhVGVALL 832 (1160)
T KOG0209|consen 819 VGALKQAHVGVALL 832 (1160)
T ss_pred hhhhhhcccceehh
Confidence 99999999999985
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-68 Score=631.14 Aligned_cols=667 Identities=25% Similarity=0.346 Sum_probs=519.4
Q ss_pred HHHhcCCCCCCCCCCc--cHH-HHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 003189 146 RKEIYGINKFTESPAR--GFW-VYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDY 222 (840)
Q Consensus 146 r~~~~G~N~~~~~~~~--~f~-~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv~~v~~~~~~ 222 (840)
+...|-.|.+...+.. +|+ +.+|+||+...++++++.++++++. +.+ .++| ..++++++++.++++++.
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~----~~~~---~~~~pl~~vl~~t~iKd~ 99 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSP----FNPY---TTLVPLLFVLGITAIKDA 99 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-ccc----cCcc---ceeeceeeeehHHHHHHH
Confidence 3457888988765433 333 7899999999999999999999887 432 1223 346688889999999999
Q ss_pred HHHHHHhHhHhhhcCceEEEEECCe-EEEEeccCCCCCcEEEecCCCcccccEEEEeecc----eEEecccccCCCCccc
Q 003189 223 KQSLQFKDLDREKKKITVQVARNGF-RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS----VLINESSLTGESEPVN 297 (840)
Q Consensus 223 ~~~~~~~~l~~~~~~~~v~V~RdG~-~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~----l~VDES~LTGES~pv~ 297 (840)
.++..+++.+++.++.++.|.|++. ..+..|.+|+|||+|.+..++.+|||.++++++. |+|+.+.|+||+....
T Consensus 100 ~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~ 179 (1151)
T KOG0206|consen 100 IEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKV 179 (1151)
T ss_pred HhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccce
Confidence 9999999999999999999999644 8999999999999999999999999999999864 9999999999998776
Q ss_pred cC----------------------------------------------CCCCeEEeccEEeec-eEEEEEEEEcccchHH
Q 003189 298 VN----------------------------------------------ALNPFLLSGTKVQNG-SCKMLVTTVGMRTQWG 330 (840)
Q Consensus 298 k~----------------------------------------------~~~~~l~sGt~v~~G-~~~~~V~~vG~~T~~g 330 (840)
|. ..++.++.|+++.+. .+.+.|+.+|.+|
T Consensus 180 k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dt--- 256 (1151)
T KOG0206|consen 180 KQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDT--- 256 (1151)
T ss_pred eeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcc---
Confidence 51 012357888888874 4789999999999
Q ss_pred HHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCC-cccc-CCc-ChHHHHHHHHHHHHH
Q 003189 331 KLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGT-HWTW-SGD-DALEILEFFAIAVTI 407 (840)
Q Consensus 331 ~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~-~~~~-~~~-~~~~~~~~~~~ai~i 407 (840)
+++..-..+..+++++++.+|.....+..+.++++++..+... .......... .+++ ... ........|+.++.+
T Consensus 257 K~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il 334 (1151)
T KOG0206|consen 257 KLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFA--IWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIIL 334 (1151)
T ss_pred hHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhh--eeeeecccccCchhhhcCchHHHHHHHHHHHHHhh
Confidence 5666666677788999999987766665555544444333211 1111111111 1111 222 112334556677778
Q ss_pred HHHhcCCchHHHHHHHHHHHHHHHh----------ccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCee
Q 003189 408 VVVAVPEGLPLAVTLSLAFAMKKMM----------NDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEI 477 (840)
Q Consensus 408 lvva~P~~Lplav~l~l~~~~~~l~----------~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~ 477 (840)
+...+|..|...+.+.-.+.+.-+. ...+.+|..+.-|.||++++|.+|||||||+|.|.+.++.+.+..
T Consensus 335 ~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~ 414 (1151)
T KOG0206|consen 335 YQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTS 414 (1151)
T ss_pred hhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcc
Confidence 8889999999888877766653332 236789999999999999999999999999999999999998776
Q ss_pred eeecCCCC-------C---------------CC------CCCCCChhHHHHHHHHHHhcCCceEEecCC--CceeEcCCh
Q 003189 478 KEVDNSKG-------T---------------PA------FGSSIPASASKLLLQSIFNNTGGEVVIGEG--NKTEILGTP 527 (840)
Q Consensus 478 ~~~~~~~~-------~---------------~~------~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~--~~~~~~g~p 527 (840)
|....... . +. ..+.........+..++++|++...+.+.+ ...+...+|
T Consensus 415 yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SP 494 (1151)
T KOG0206|consen 415 YGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESP 494 (1151)
T ss_pred cccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCC
Confidence 54221110 0 00 001112233445667888888877766333 245668899
Q ss_pred hhHHHHHHHHHcCCChHH------------HhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhccccc
Q 003189 528 TETAILEFGLLLGGDFQA------------ERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFL 595 (840)
Q Consensus 528 ~e~All~~~~~~~~~~~~------------~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~ 595 (840)
.|.|+++.|+..|..+.. ....+++++..+|+|.||||||+++.|++.+.++||||+..|.+++..
T Consensus 495 DE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~-- 572 (1151)
T KOG0206|consen 495 DEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSK-- 572 (1151)
T ss_pred cHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhh--
Confidence 999999999999876532 234789999999999999999999999999999999999999999874
Q ss_pred ccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCC-------------C-CC--------CCCCCCceeeee
Q 003189 596 NSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF-------------S-AD--------APIPTEGYTCIG 653 (840)
Q Consensus 596 ~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~-------------~-~~--------~~~~~~~~~~lg 653 (840)
-....++.-.+.+++||.+|+||+|+|||+++++. + .+ .+..|+||+++|
T Consensus 573 --------~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLG 644 (1151)
T KOG0206|consen 573 --------NGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLG 644 (1151)
T ss_pred --------cchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhc
Confidence 22455667778999999999999999999998761 0 01 135689999999
Q ss_pred eecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC-----------------------------
Q 003189 654 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----------------------------- 704 (840)
Q Consensus 654 ~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~----------------------------- 704 (840)
..+++|++++|++++|+.|++||||+||+|||..+||..|+..|++..++.
T Consensus 645 ATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~ 724 (1151)
T KOG0206|consen 645 ATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRK 724 (1151)
T ss_pred ceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999986532
Q ss_pred ------------------ccccChhhhcCCHHH----Hhhhc--CCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCc
Q 003189 705 ------------------IAIEGPEFREKSDEE----LSKLI--PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGT 760 (840)
Q Consensus 705 ------------------~~~~g~~~~~~~~~~----~~~~~--~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ 760 (840)
++++|+.+....+.+ +.+.. ++..++||++|.||+.+|+..++..+.+++.+|||.
T Consensus 725 ~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGA 804 (1151)
T KOG0206|consen 725 FTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGA 804 (1151)
T ss_pred hhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCC
Confidence 334444443322221 12222 566799999999999999999876689999999999
Q ss_pred cCHHHhhhCCccEEecCCCcH--HHHhhcCEEeccCCchHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 003189 761 NDAPALHEADIGLAMGIAGTE--VAKESADVIILDDNFSTIVTV-AKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACL 837 (840)
Q Consensus 761 ND~~al~~Advgiamg~~g~~--~ak~~aDivlldd~f~~i~~~-i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~~~~ 837 (840)
||.+|+++||||| ||+|.| .|..+||+-+.. |.-+-++ +.+||+.|.++.+++.|.++.|+...++.|.+.++
T Consensus 805 NDVsMIQ~AhVGV--GIsG~EGmQAvmsSD~AIaq--FrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~ 880 (1151)
T KOG0206|consen 805 NDVSMIQEAHVGV--GISGQEGMQAVMSSDFAIAQ--FRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFF 880 (1151)
T ss_pred ccchheeeCCcCe--eeccchhhhhhhcccchHHH--HHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 9999999999999 455555 478889999987 8888777 78999999999999999999999999999999999
Q ss_pred cC
Q 003189 838 TG 839 (840)
Q Consensus 838 ~g 839 (840)
+|
T Consensus 881 ~g 882 (1151)
T KOG0206|consen 881 NG 882 (1151)
T ss_pred CC
Confidence 87
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-66 Score=565.09 Aligned_cols=640 Identities=23% Similarity=0.337 Sum_probs=480.3
Q ss_pred HHHhcCCCCCCCCCC--ccHH-HHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 003189 146 RKEIYGINKFTESPA--RGFW-VYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDY 222 (840)
Q Consensus 146 r~~~~G~N~~~~~~~--~~f~-~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv~~v~~~~~~ 222 (840)
++.+|-+|.+...+. .+|+ ..++++|+...+.++++.++..++..+.. |....| ..++.++.+++.+.+-
T Consensus 75 ~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~i-g~l~ty------~~pl~fvl~itl~kea 147 (1051)
T KOG0210|consen 75 RRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKI-GYLSTY------WGPLGFVLTITLIKEA 147 (1051)
T ss_pred ccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchhee-cchhhh------hHHHHHHHHHHHHHHH
Confidence 446788888876543 3343 56778888888888888888777665532 222122 2344455556666776
Q ss_pred HHHHHHhHhHhhhcCceEEEE-ECCeEEEEeccCCCCCcEEEecCCCcccccEEEEeec----ceEEecccccCCCCccc
Q 003189 223 KQSLQFKDLDREKKKITVQVA-RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGF----SVLINESSLTGESEPVN 297 (840)
Q Consensus 223 ~~~~~~~~l~~~~~~~~v~V~-RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~----~l~VDES~LTGES~pv~ 297 (840)
.++.+++.-+++.++..-+++ |+|...+ ++++|.+||+|.+..+++||||.+++..+ +|.|-+-.|+||++...
T Consensus 148 vdd~~r~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 148 VDDLKRRRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKL 226 (1051)
T ss_pred HHHHHHHHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCccccee
Confidence 676666666666665555665 7887665 99999999999999999999999999864 38999999999998654
Q ss_pred cC----------------------------------------------CCCCeEEeccEEeeceEEEEEEEEcccchHHH
Q 003189 298 VN----------------------------------------------ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGK 331 (840)
Q Consensus 298 k~----------------------------------------------~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~ 331 (840)
|- .-++.++++|.+.+|.+.+.|+.||.+|.
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtR--- 303 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTR--- 303 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHH---
Confidence 40 01357999999999999999999999994
Q ss_pred HHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHh
Q 003189 332 LMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVA 411 (840)
Q Consensus 332 i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva 411 (840)
-+.+...+..+---++..+|.+.+++....+.++++.... .|.... |...++..+.++.-.
T Consensus 304 svMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~-----------~g~~~~--------wyi~~~RfllLFS~I 364 (1051)
T KOG0210|consen 304 SVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAM-----------KGFGSD--------WYIYIIRFLLLFSSI 364 (1051)
T ss_pred HHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHh-----------hcCCCc--------hHHHHHHHHHHHhhh
Confidence 3444445555556677788888888776666555443221 111111 223344445555666
Q ss_pred cCCchHHHHHHHHHHHHHHHhcc----ccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeec------
Q 003189 412 VPEGLPLAVTLSLAFAMKKMMND----KALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVD------ 481 (840)
Q Consensus 412 ~P~~Lplav~l~l~~~~~~l~~~----~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~------ 481 (840)
+|..|-.-+.++-.+-...+.++ |.+||....-|.||++.++.+|||||||+|+|.+.++..+.-.+..+
T Consensus 365 IPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~ 444 (1051)
T KOG0210|consen 365 IPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVS 444 (1051)
T ss_pred ceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHH
Confidence 89999999999988888888877 67799999999999999999999999999999999998874333211
Q ss_pred -------CC---CCC---CCCCCCCChhHHHHHHHHHHhcCCceEEecCCC-ceeEcCChhhHHHHHHHHHcCCChH---
Q 003189 482 -------NS---KGT---PAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN-KTEILGTPTETAILEFGLLLGGDFQ--- 544 (840)
Q Consensus 482 -------~~---~~~---~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~-~~~~~g~p~e~All~~~~~~~~~~~--- 544 (840)
.+ .+. .......+..+. -+.++++.||+.....++++ ..+...+|.|.||++|....|+..-
T Consensus 445 ~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~-~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd 523 (1051)
T KOG0210|consen 445 QHIQSLYTPGRNKGKGALSRVKKDMSARVR-NAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRD 523 (1051)
T ss_pred HHHHHhhCCCcccccccchhhcCcccHHHH-HHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecc
Confidence 00 000 000112222233 34467777777766666554 4456789999999999887775432
Q ss_pred ----------HHhhccceEEEecCCCCCceEEEEEEeC-CCcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHH
Q 003189 545 ----------AERQASKIVKVEPFNSVKKQMGVVIELP-EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLN 613 (840)
Q Consensus 545 ----------~~~~~~~i~~~~pF~s~~k~~~vv~~~~-~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~ 613 (840)
+...+++|++.+||+|+.||||++++.+ .+++..|.|||.-.+-..- +| .++++
T Consensus 524 ~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iV-q~--------------NdWle 588 (1051)
T KOG0210|consen 524 RHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIV-QY--------------NDWLE 588 (1051)
T ss_pred cceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccc-cc--------------chhhh
Confidence 1223789999999999999999999976 6889999999965543322 11 23578
Q ss_pred HHHHHHHHcccceeEEEEEEcCCCCCC--------------C---------CCCCCCceeeeeeecccCCCCcchHHHHH
Q 003189 614 ETIEKFASEALRTLCLACMEIGNEFSA--------------D---------APIPTEGYTCIGIVGIKDPMRPGVKESVA 670 (840)
Q Consensus 614 ~~~~~~~~~glr~l~~A~~~~~~~~~~--------------~---------~~~~~~~~~~lg~~~~~D~lR~~~~~aI~ 670 (840)
+...+||.+|+|++.+|.|.++.+.-+ + ...+|.|+.++|+.|.+|.++++++.+++
T Consensus 589 EE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLE 668 (1051)
T KOG0210|consen 589 EECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLE 668 (1051)
T ss_pred hhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHH
Confidence 889999999999999999999865100 0 12568899999999999999999999999
Q ss_pred HHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC----------------------------ccccChhhhc---CCHHH
Q 003189 671 ICRSAGITVRMVTGDNINTAKAIARECGILTDNG----------------------------IAIEGPEFRE---KSDEE 719 (840)
Q Consensus 671 ~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~----------------------------~~~~g~~~~~---~~~~~ 719 (840)
.||+|||++||+|||..+||..||+..++...+. ++++|+.+.. .-++|
T Consensus 669 lLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~E 748 (1051)
T KOG0210|consen 669 LLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDE 748 (1051)
T ss_pred HHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHH
Confidence 9999999999999999999999999999976432 6778877653 34566
Q ss_pred Hhhhc--CCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcH--HHHhhcCEEeccCC
Q 003189 720 LSKLI--PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE--VAKESADVIILDDN 795 (840)
Q Consensus 720 ~~~~~--~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~--~ak~~aDivlldd~ 795 (840)
+.++. ....|+|||+|.||+++++.+|++.|..|+.+|||.||..|+++||+||.. -|.| .|.-+||+.+..
T Consensus 749 f~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI--~gkEGkQASLAADfSItq-- 824 (1051)
T KOG0210|consen 749 FIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGI--VGKEGKQASLAADFSITQ-- 824 (1051)
T ss_pred HHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceee--ecccccccchhccccHHH--
Confidence 66654 344599999999999999999998899999999999999999999999944 4444 366789999987
Q ss_pred chHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003189 796 FSTIVTVAKW-GRSVYINIQKFVQFQLTVNVVALIVNFSSA 835 (840)
Q Consensus 796 f~~i~~~i~~-gR~~~~~i~k~i~f~l~~N~~~l~~~~~~~ 835 (840)
|+.+-+++.| ||+.|++--+.-||.+-..++.-.+..+++
T Consensus 825 F~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs 865 (1051)
T KOG0210|consen 825 FSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFS 865 (1051)
T ss_pred HHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 9999999666 999999999999999888776665555544
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-61 Score=510.80 Aligned_cols=482 Identities=28% Similarity=0.399 Sum_probs=380.2
Q ss_pred HHHHHHHHHHHhHhHhhhcCceEEEEEC-CeEEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecccccCCCCcc
Q 003189 218 ATSDYKQSLQFKDLDREKKKITVQVARN-GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPV 296 (840)
Q Consensus 218 ~~~~~~~~~~~~~l~~~~~~~~v~V~Rd-G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv 296 (840)
++.+-+-..|...|.+-+....++++++ |..+.|++.+|..||+|.++.||.||+||.+++|.. +||||.+||||.||
T Consensus 84 a~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESAITGESaPV 162 (681)
T COG2216 84 AVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAITGESAPV 162 (681)
T ss_pred HHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhhccCCCcce
Confidence 3344444445555655445556677775 899999999999999999999999999999999975 99999999999999
Q ss_pred ccCCCCCe--EEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 297 NVNALNPF--LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQ 374 (840)
Q Consensus 297 ~k~~~~~~--l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~ 374 (840)
.|..+..+ +-.||.+++..+++++++.-.+|.+-++..+++.++.+|||-+..++- ...++.+..+..++ .
T Consensus 163 iresGgD~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~i-----LL~~LTliFL~~~~--T 235 (681)
T COG2216 163 IRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTI-----LLSGLTLIFLLAVA--T 235 (681)
T ss_pred eeccCCCcccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHH-----HHHHHHHHHHHHHH--h
Confidence 99877432 899999999999999999999999999999999999999997755542 22222211111111 1
Q ss_pred hHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEE
Q 003189 375 GLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSIC 454 (840)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~ 454 (840)
-|.+..+..+. . -.+..-++++|..+|-.+.-.++.-=..+|.|+.+.|++-++..|+|..|.+|++.
T Consensus 236 l~p~a~y~~g~-------~-----~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtli 303 (681)
T COG2216 236 LYPFAIYSGGG-------A-----ASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLL 303 (681)
T ss_pred hhhHHHHcCCC-------C-----cCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEE
Confidence 11111111110 0 11344577888889988877777666779999999999999999999999999999
Q ss_pred ecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceeEcCChhhHHHHH
Q 003189 455 SDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILE 534 (840)
Q Consensus 455 ~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~ 534 (840)
.|||||+|.|+-.-.++++.+... . .+ +..+...++ +. -..|..+.+++
T Consensus 304 LDKTGTIT~GnR~A~~f~p~~gv~----------------~--~~-la~aa~lsS---l~---------DeTpEGrSIV~ 352 (681)
T COG2216 304 LDKTGTITLGNRQASEFIPVPGVS----------------E--EE-LADAAQLAS---LA---------DETPEGRSIVE 352 (681)
T ss_pred ecccCceeecchhhhheecCCCCC----------------H--HH-HHHHHHHhh---hc---------cCCCCcccHHH
Confidence 999999999987777766544331 1 11 222222222 11 24678889999
Q ss_pred HHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHH
Q 003189 535 FGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNE 614 (840)
Q Consensus 535 ~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~ 614 (840)
.+++++.+.+...... -....||+.+.+++++-. +++ +-.-||+.+.+....+ ..|...| ..++.
T Consensus 353 LA~~~~~~~~~~~~~~-~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~----~~~g~~p------~~l~~ 417 (681)
T COG2216 353 LAKKLGIELREDDLQS-HAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVR----ERGGHIP------EDLDA 417 (681)
T ss_pred HHHHhccCCCcccccc-cceeeecceecccccccC--CCC--ceeecccHHHHHHHHH----hcCCCCC------HHHHH
Confidence 9998876543322211 346789999888877643 333 5567999999987654 2232222 45677
Q ss_pred HHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHH
Q 003189 615 TIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA 694 (840)
Q Consensus 615 ~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA 694 (840)
..++.++.|-..++++ .|..++|++.++|-++||.+|=+.+||+.||+.+|+||||+.||.+||
T Consensus 418 ~~~~vs~~GGTPL~V~----------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA 481 (681)
T COG2216 418 AVDEVSRLGGTPLVVV----------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA 481 (681)
T ss_pred HHHHHHhcCCCceEEE----------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHH
Confidence 8888899999888886 567899999999999999999999999999999999999999999999
Q ss_pred HHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEE
Q 003189 695 RECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (840)
Q Consensus 695 ~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgia 774 (840)
+|.|+++ ..|.++|+||.++|+.-|.+ |+.|+|||||+||+|||.+||||+|
T Consensus 482 ~EAGVDd---------------------------fiAeatPEdK~~~I~~eQ~~-grlVAMtGDGTNDAPALAqAdVg~A 533 (681)
T COG2216 482 AEAGVDD---------------------------FIAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVGVA 533 (681)
T ss_pred HHhCchh---------------------------hhhcCChHHHHHHHHHHHhc-CcEEEEcCCCCCcchhhhhcchhhh
Confidence 9999976 89999999999999999999 9999999999999999999999999
Q ss_pred ecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHH
Q 003189 775 MGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVY 810 (840)
Q Consensus 775 mg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~ 810 (840)
|. +||..|||++++|=+|.|...+.+++..|+...
T Consensus 534 MN-sGTqAAkEAaNMVDLDS~PTKlievV~IGKqlL 568 (681)
T COG2216 534 MN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLL 568 (681)
T ss_pred hc-cccHHHHHhhcccccCCCccceehHhhhhhhhe
Confidence 99 999999999999999999999999999999864
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-35 Score=303.36 Aligned_cols=223 Identities=33% Similarity=0.554 Sum_probs=187.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEECCeEEEEeccCCCCCcEEEecCCCcccccEEEEe-ecceEEe
Q 003189 207 VMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS-GFSVLIN 285 (840)
Q Consensus 207 ~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~-g~~l~VD 285 (840)
++.+++..++..+.+++.++..+++.+...+..++|+|||++++|+++||+|||+|.|++||++||||++++ | .+.||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g-~~~vd 81 (230)
T PF00122_consen 3 LFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESG-SAYVD 81 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESS-EEEEE
T ss_pred EEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecc-ccccc
Confidence 344555566666777777777777776555545999999999999999999999999999999999999999 6 57999
Q ss_pred cccccCCCCccccCC----CCCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCCCChHHHHHHHHHHHHHHHH
Q 003189 286 ESSLTGESEPVNVNA----LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIG 361 (840)
Q Consensus 286 ES~LTGES~pv~k~~----~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~ 361 (840)
||.+|||+.|+.|.+ .++++|+||.+.+|.+.++|++||.+|..|++.+.+.+...+++++++.+++++.++.++.
T Consensus 82 ~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (230)
T PF00122_consen 82 ESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIII 161 (230)
T ss_dssp CHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcc
Confidence 999999999999981 3568999999999999999999999999999999998888888999999999999999988
Q ss_pred HHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhccccccccc
Q 003189 362 LFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHL 441 (840)
Q Consensus 362 l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~ 441 (840)
++++++++++++.. . ...++...+..++++++++|||+||+++++++.+++++|.++|+++|++
T Consensus 162 ~~~~~~~~~~~~~~------~----------~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~ 225 (230)
T PF00122_consen 162 LAIAILVFIIWFFN------D----------SGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNL 225 (230)
T ss_dssp HHHHHHHHHHCHTG------S----------TTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESST
T ss_pred cccchhhhccceec------c----------cccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCc
Confidence 88887777554321 0 0113456788889999999999999999999999999999999999999
Q ss_pred hhhhc
Q 003189 442 AACET 446 (840)
Q Consensus 442 ~a~E~ 446 (840)
+++|+
T Consensus 226 ~a~E~ 230 (230)
T PF00122_consen 226 SALEA 230 (230)
T ss_dssp THHHH
T ss_pred ccccC
Confidence 99995
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-23 Score=216.15 Aligned_cols=97 Identities=44% Similarity=0.717 Sum_probs=91.4
Q ss_pred ceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCc
Q 003189 648 GYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKI 727 (840)
Q Consensus 648 ~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 727 (840)
++.++|.+.+.||+||+++++|+.|+++|+++.|+|||+..++.++|+++||.. .
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------~ 169 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------S 169 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS-------------------------E
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc-------------------------c
Confidence 688999999999999999999999999999999999999999999999999953 2
Q ss_pred eEEEec--CcccH--HHHHHHHHHhCCCEEEEEcCCccCHHHhhhCC
Q 003189 728 QVMARS--SPMDK--HTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770 (840)
Q Consensus 728 ~v~ar~--~P~~K--~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Ad 770 (840)
.|+++. +|++| ..+++.|+.. ++.|+|+|||.||++|+++||
T Consensus 170 ~v~a~~~~kP~~k~~~~~i~~l~~~-~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 170 IVFARVIGKPEPKIFLRIIKELQVK-PGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp EEEESHETTTHHHHHHHHHHHHTCT-GGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccccccchhHHHHHHHHhcC-CCEEEEEccCHHHHHHHHhCc
Confidence 399999 99999 9999999966 679999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.57 E-value=9e-15 Score=129.89 Aligned_cols=124 Identities=23% Similarity=0.364 Sum_probs=106.2
Q ss_pred eeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceE
Q 003189 650 TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQV 729 (840)
Q Consensus 650 ~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v 729 (840)
...+.++---.+=+++++.|++|++. +++++.|||...+....|+-.||... +|
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------rv 73 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------RV 73 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee-------------------------ee
Confidence 34566666677789999999999999 99999999999999999999999764 39
Q ss_pred EEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecC--CCcHHHHhhcCEEeccCCchHHHHH
Q 003189 730 MARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI--AGTEVAKESADVIILDDNFSTIVTV 802 (840)
Q Consensus 730 ~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~--~g~~~ak~~aDivlldd~f~~i~~~ 802 (840)
||...|+.|..+++.|++. ++.|.|+|||.||.+||++||+||+.=. ...+-+.++||+++-+ ...++++
T Consensus 74 ~a~a~~e~K~~ii~eLkk~-~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 74 FAGADPEMKAKIIRELKKR-YEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred ecccCHHHHHHHHHHhcCC-CcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 9999999999999999988 8999999999999999999999998732 2344467899999865 5555554
|
|
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.6e-12 Score=142.95 Aligned_cols=253 Identities=16% Similarity=0.230 Sum_probs=184.2
Q ss_pred CchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCC------------------------
Q 003189 582 GASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE------------------------ 637 (840)
Q Consensus 582 Ga~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~------------------------ 637 (840)
|-...+.+.|+.++|. ....||+...+.++.+....-.-.| .|++||||+....
T Consensus 698 g~ad~~~eACTdfWdG-adi~PlSg~dkkkV~DFY~RaclsG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWDG-ADIIPLSGRDKKKVKDFYLRACLSG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcCC-ceeeecCcchHHHHHHHHHHHhhcc-cchheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 6678889999999974 4578999999988888877766666 5999999985421
Q ss_pred ---CCC--------------CC-----------CCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHH
Q 003189 638 ---FSA--------------DA-----------PIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINT 689 (840)
Q Consensus 638 ---~~~--------------~~-----------~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~t 689 (840)
+.. ++ ....++.+|.|++..+.+.|++....|+.|.++.|+.+..|-.+...
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 000 00 01124678999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCccCCC------------------------------------ccccChhhhcCCHHHH-------------
Q 003189 690 AKAIARECGILTDNG------------------------------------IAIEGPEFREKSDEEL------------- 720 (840)
Q Consensus 690 a~~iA~~~Gi~~~~~------------------------------------~~~~g~~~~~~~~~~~------------- 720 (840)
.+-.|.++||...++ +..+..+...+..|+.
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 999999999976432 1111111111111110
Q ss_pred --------------------hhhcC-------CceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccC--HHHhhhCCc
Q 003189 721 --------------------SKLIP-------KIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTND--APALHEADI 771 (840)
Q Consensus 721 --------------------~~~~~-------~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND--~~al~~Adv 771 (840)
...+. -+-.|..++|+.--++|+.+|++ |++++.+|...|- .-.+-+|||
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~-GEVtcclGS~aN~rNSciflkadI 1014 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQEN-GEVTCCLGSCANARNSCIFLKADI 1014 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHc-CcEEEEeccccccccceEEEccce
Confidence 00000 01278889999999999999998 9999999999884 345678999
Q ss_pred cEEecC------------CCcHH-HHh-----------------hcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 772 GLAMGI------------AGTEV-AKE-----------------SADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQL 821 (840)
Q Consensus 772 giamg~------------~g~~~-ak~-----------------~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l 821 (840)
+||+-- -++.. ..+ ++|+-+-...+-+|..+|..+|.....+|+.+.|.|
T Consensus 1015 SialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiL 1094 (1354)
T KOG4383|consen 1015 SIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFIL 1094 (1354)
T ss_pred eEEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 998731 11111 111 234444444566788899999999999999999999
Q ss_pred HHHHHHHHHHHHHhhh
Q 003189 822 TVNVVALIVNFSSACL 837 (840)
Q Consensus 822 ~~N~~~l~~~~~~~~~ 837 (840)
...+...++.|++.++
T Consensus 1095 q~qL~l~Vi~flSc~~ 1110 (1354)
T KOG4383|consen 1095 QAQLLLSVIIFLSCFF 1110 (1354)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999888888888765
|
|
| >PF12515 CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory domain; InterPro: IPR024750 This entry represents the N-terminal autoinhibitory calmodulin-binding domain characteristic of certain calcium-transporting ATPases [] | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.8e-15 Score=109.66 Aligned_cols=46 Identities=63% Similarity=1.076 Sum_probs=43.6
Q ss_pred cccccCCCCCCCCCcHHHHHHHHHhhcccccccccchhhhccchhhh
Q 003189 4 YLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFE 50 (840)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~r~f~~~~~~~~~~e 50 (840)
|+.++|+ +++||+|+|+++|||+|+++|+|++|||||+++|+|+.|
T Consensus 1 yl~~~Fd-i~~Kn~s~e~l~rWR~a~~lv~N~~RRFR~~~dL~k~~e 46 (47)
T PF12515_consen 1 YLDDNFD-IPAKNSSEEALRRWRQAVGLVKNARRRFRYTADLKKREE 46 (47)
T ss_pred CCccccC-CCCCCCCHHHHHHHHHHhHHhccccceeeecccHhhHhc
Confidence 6789998 999999999999999999999999999999999998875
|
This domain binds calmodulin in a calcium-dependent fashion and has a conserved RRFR sequence motif. There are two completely conserved residues (F and W) that may be functionally important.; GO: 0005516 calmodulin binding |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.9e-14 Score=123.48 Aligned_cols=87 Identities=38% Similarity=0.604 Sum_probs=71.1
Q ss_pred hcCCceEEecCCCc-eeEcCChhhHHHHHHHHHc--CCChHHHhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEcCc
Q 003189 507 NNTGGEVVIGEGNK-TEILGTPTETAILEFGLLL--GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGA 583 (840)
Q Consensus 507 ~~~~~~~~~~~~~~-~~~~g~p~e~All~~~~~~--~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~KGa 583 (840)
+|+++.+..+++.. .+..|+|+|.||+.|+... +.+....+..+++++.+||+|++|+|+++++ .++.+.+++|||
T Consensus 2 LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA 80 (91)
T PF13246_consen 2 LCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGA 80 (91)
T ss_pred CccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCC
Confidence 35556665444332 3489999999999999998 4567889999999999999999999999998 334577799999
Q ss_pred hHHHHHhcccc
Q 003189 584 SEIILAACDKF 594 (840)
Q Consensus 584 ~e~il~~c~~~ 594 (840)
||.||++|+++
T Consensus 81 ~e~il~~Ct~i 91 (91)
T PF13246_consen 81 PEVILDRCTHI 91 (91)
T ss_pred hHHHHHhcCCC
Confidence 99999999863
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=4.2e-10 Score=120.41 Aligned_cols=68 Identities=31% Similarity=0.381 Sum_probs=61.6
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
.+|...++.|.+++| +.|+++|||.||.+||+.|++|+||| ++.+.+|+.||+|..+++=.++..+++
T Consensus 195 vsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 195 VNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHH
Confidence 679999999888766 57899999999999999999999999 999999999999998888888887774
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.1e-09 Score=117.18 Aligned_cols=145 Identities=18% Similarity=0.232 Sum_probs=104.0
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----CC-ccc--cCh---------------------
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAI--EGP--------------------- 710 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~----~~-~~~--~g~--------------------- 710 (840)
..+.+.++++|++++++|+++.+.||++...+..+.+++|+... |+ .+. .|.
T Consensus 18 ~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~ 97 (272)
T PRK15126 18 HHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWD 97 (272)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhh
Confidence 35889999999999999999999999999999999999998531 22 000 000
Q ss_pred --------------------hh----------------hcC------------CHHH-------HhhhcC-CceEE----
Q 003189 711 --------------------EF----------------REK------------SDEE-------LSKLIP-KIQVM---- 730 (840)
Q Consensus 711 --------------------~~----------------~~~------------~~~~-------~~~~~~-~~~v~---- 730 (840)
.+ ..+ .+++ +.+.+. ++.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ 177 (272)
T PRK15126 98 TRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSAT 177 (272)
T ss_pred cCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 00 000 0011 001111 11111
Q ss_pred --EecCc--ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCE--EeccCCchHHHH
Q 003189 731 --ARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV--IILDDNFSTIVT 801 (840)
Q Consensus 731 --ar~~P--~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDi--vlldd~f~~i~~ 801 (840)
....| ..|...++.|.+.+| +.|+++|||.||.+||+.|+.|+||| ++.+.+|+.||. |..+++-.++..
T Consensus 178 ~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~ 256 (272)
T PRK15126 178 DCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSH 256 (272)
T ss_pred cEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHH
Confidence 12223 479999999988877 57899999999999999999999999 999999999996 666777788887
Q ss_pred HHH
Q 003189 802 VAK 804 (840)
Q Consensus 802 ~i~ 804 (840)
+++
T Consensus 257 ~l~ 259 (272)
T PRK15126 257 YLT 259 (272)
T ss_pred HHH
Confidence 774
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.3e-10 Score=94.84 Aligned_cols=67 Identities=25% Similarity=0.541 Sum_probs=63.3
Q ss_pred hcCHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHH
Q 003189 118 HGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVS 186 (840)
Q Consensus 118 ~~gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is 186 (840)
..+++++++.|+++...||+.++ +.+|++.||+|.++.++.+++|+.++++|+++++++|++++++|
T Consensus 3 ~~~~~~v~~~l~t~~~~GLs~~e--v~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 3 QLSVEEVLKRLNTSSSQGLSSEE--VEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp TSSHHHHHHHHTTBTSSBBTHHH--HHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHCcCCCCCCCHHH--HHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 45789999999999999999876 99999999999999999999999999999999999999999986
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=9.6e-10 Score=119.22 Aligned_cols=129 Identities=21% Similarity=0.333 Sum_probs=100.7
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC--CCc-cccChhhhcCCHHHHhhhcCCceEEE-ecCc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGI-AIEGPEFREKSDEELSKLIPKIQVMA-RSSP 735 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~--~~~-~~~g~~~~~~~~~~~~~~~~~~~v~a-r~~P 735 (840)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+... +.+ +.+|.- .. .+.. -+..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~l---------tg-----~v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKL---------TG-----NVLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEE---------Ee-----EecCccCCc
Confidence 5799999999999999999999999998889999999998531 000 000000 00 0000 0234
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
..|...++.+.+++| +.+.++|||.||.+|++.|++|+|| ++.+..++.||+++...++..+..++-
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 689999999887766 6799999999999999999999999 678888999999999889998887653
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.1e-09 Score=114.53 Aligned_cols=144 Identities=31% Similarity=0.416 Sum_probs=108.0
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----CC-cccc-Chhh----------------------
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIE-GPEF---------------------- 712 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~----~~-~~~~-g~~~---------------------- 712 (840)
+.+.++++|+++++.|+++.++||++...+..+.+++|+... |+ .+.. |+.+
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~ 100 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQG 100 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhccC
Confidence 899999999999999999999999999999999999999741 11 0000 0000
Q ss_pred -------------------------------------h----------cCCH---HHH----hhhcC-CceEEEecCc--
Q 003189 713 -------------------------------------R----------EKSD---EEL----SKLIP-KIQVMARSSP-- 735 (840)
Q Consensus 713 -------------------------------------~----------~~~~---~~~----~~~~~-~~~v~ar~~P-- 735 (840)
. .... ++. .+.++ ....+.+..|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~ 180 (264)
T COG0561 101 IALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPIS 180 (264)
T ss_pred ceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCce
Confidence 0 0001 111 11111 2223333333
Q ss_pred -------ccHHHHHHHHHHhCCC---EEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 003189 736 -------MDKHTLVKHLRTTLGE---VVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (840)
Q Consensus 736 -------~~K~~~V~~l~~~~g~---~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~ 805 (840)
.+|...++.|.+++|- .|+++||+.||.+||+.|+.|+||| ++.+.+|+.||++....+-.+|..++++
T Consensus 181 lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 181 LDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred EEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHHHHHH
Confidence 6899999999887673 4999999999999999999999999 8899999999988889999999988765
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.6e-09 Score=113.95 Aligned_cols=68 Identities=24% Similarity=0.285 Sum_probs=59.5
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcC--EEeccCCchHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD--VIILDDNFSTIVTVAK 804 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aD--ivlldd~f~~i~~~i~ 804 (840)
.+|...++.|.+++| +.|+++|||.||.+||+.|+.|+||| ++.+.+|+.|| .|..+++=.++..+++
T Consensus 189 vsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 189 VSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 569999999888766 56899999999999999999999999 99999999988 6777777778877764
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.5e-09 Score=110.33 Aligned_cols=129 Identities=16% Similarity=0.115 Sum_probs=95.4
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC--CccccChhhhcCCHHHHhhhcCCceEEEecCccc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (840)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+..-- .+.+.+.. .+... .. ..|.+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g-----------~~tG~-~~--~~~~~ 132 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-----------RVVGY-QL--RQKDP 132 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC-----------eeECe-ee--cCcch
Confidence 68999999999999975 99999999999999999999996311 11111100 00000 01 35789
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHH
Q 003189 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWG 806 (840)
Q Consensus 738 K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~g 806 (840)
|...++.+++. |..+.++|||.||.||++.||+|+++. +.+..++.||=.-.--+.+.+..++..+
T Consensus 133 K~~~l~~l~~~-~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 133 KRQSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred HHHHHHHHHhh-CCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 99999999877 878999999999999999999999996 4555555555443334577777776654
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.7e-09 Score=111.26 Aligned_cols=144 Identities=25% Similarity=0.312 Sum_probs=104.6
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----CC-cccc---Chhhhc--C--------------
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIE---GPEFRE--K-------------- 715 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~----~~-~~~~---g~~~~~--~-------------- 715 (840)
++.|.+.++|+++++.|++++++||++...+..+++++|+... ++ .+.. +..+.. +
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRF 99 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhc
Confidence 3788999999999999999999999999999999999998532 22 1111 110000 0
Q ss_pred -------------------------CHHHHhhhc----CCceE-----EEecCc--ccHHHHHHHHHHhCC---CEEEEE
Q 003189 716 -------------------------SDEELSKLI----PKIQV-----MARSSP--MDKHTLVKHLRTTLG---EVVAVT 756 (840)
Q Consensus 716 -------------------------~~~~~~~~~----~~~~v-----~ar~~P--~~K~~~V~~l~~~~g---~~v~~~ 756 (840)
..+++.+.+ ....+ +....| ..|...++.+.+++| +.++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~ 179 (230)
T PRK01158 100 PEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAI 179 (230)
T ss_pred cccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 001111111 01111 112333 359999999887766 568999
Q ss_pred cCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 757 GDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 757 GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
||+.||.+|++.|++|+||| ++.+.+|+.||+|..+++=.++.++++
T Consensus 180 GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 180 GDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 99999999999999999999 999999999999998888888887765
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.7e-09 Score=111.50 Aligned_cols=142 Identities=25% Similarity=0.332 Sum_probs=101.9
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----CC-ccccC-hhh-hc------C-----------
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEG-PEF-RE------K----------- 715 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~----~~-~~~~g-~~~-~~------~----------- 715 (840)
.+.|.+.++|++|+++|++++++||++...+..+++.+++... ++ .+... ... .. +
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4889999999999999999999999999999999999998632 22 11110 000 00 0
Q ss_pred -------------------CHHHHhhhcC--CceEE-----Ee--cCcccHHHHHHHHHHhCC---CEEEEEcCCccCHH
Q 003189 716 -------------------SDEELSKLIP--KIQVM-----AR--SSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAP 764 (840)
Q Consensus 716 -------------------~~~~~~~~~~--~~~v~-----ar--~~P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~ 764 (840)
..+.+...+. .+.+. .. ....+|...++.+.+.+| +.++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0011111111 11111 11 224689999999988766 35899999999999
Q ss_pred HhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHH
Q 003189 765 ALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTV 802 (840)
Q Consensus 765 al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~ 802 (840)
|++.|++|+||+ ++.+.+|+.||+|..+++-.+|.++
T Consensus 178 ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhh
Confidence 999999999999 9999999999999977666666543
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.97 E-value=5.6e-09 Score=121.06 Aligned_cols=68 Identities=32% Similarity=0.437 Sum_probs=60.0
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
.+|...++.|.+.+| +.|+++|||.||.+||+.|++||||| +|.+.+|+.||+|..+++=.+|..+++
T Consensus 506 vSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 506 TSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 467777888877766 56899999999999999999999999 999999999999998888888888775
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.97 E-value=4.1e-09 Score=110.86 Aligned_cols=145 Identities=27% Similarity=0.346 Sum_probs=105.2
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----CC-cc--------------------------
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IA-------------------------- 706 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~----~~-~~-------------------------- 706 (840)
...+.|.+.+++++++++|+++++.||++...+..+..++++... ++ .+
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 345779999999999999999999999999999999999998621 11 00
Q ss_pred --------ccChhhh---------------------------------------cCCH-------HHHhhhcCCceEEEe
Q 003189 707 --------IEGPEFR---------------------------------------EKSD-------EELSKLIPKIQVMAR 732 (840)
Q Consensus 707 --------~~g~~~~---------------------------------------~~~~-------~~~~~~~~~~~v~ar 732 (840)
.++..+. ...+ +++.+.++....+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 0000000 0001 112222232212222
Q ss_pred -------c--CcccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHH
Q 003189 733 -------S--SPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIV 800 (840)
Q Consensus 733 -------~--~P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~ 800 (840)
. ...+|...++.|.+.+| +.++++||+.||.+||+.|+.|+||+ ++++..|+.||++..+.+=.+|.
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~ 251 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVA 251 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHH
Confidence 2 23899999999988766 67999999999999999999999999 99999999999999877667777
Q ss_pred HHH
Q 003189 801 TVA 803 (840)
Q Consensus 801 ~~i 803 (840)
++|
T Consensus 252 ~~i 254 (254)
T PF08282_consen 252 KAI 254 (254)
T ss_dssp HHH
T ss_pred HhC
Confidence 654
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.5e-09 Score=109.52 Aligned_cols=128 Identities=21% Similarity=0.314 Sum_probs=96.7
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC--ccccChhhhcCCHHHHhhhcCCceEEEe-cCcc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGPEFREKSDEELSKLIPKIQVMAR-SSPM 736 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~ar-~~P~ 736 (840)
+++|++++.++.|++.|+++.++|+.....+..+.+.+|+..-.. ....+..+. ..+.+. ..+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~ 151 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLT-------------GLVEGPIVDAS 151 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEE-------------EEecCcccCCc
Confidence 589999999999999999999999999999999999999864110 000000000 000111 1234
Q ss_pred cHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHH
Q 003189 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTV 802 (840)
Q Consensus 737 ~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~ 802 (840)
.|..+++.+.+++| +.+.++||+.||.++++.|+++++++ +.+..++.||++|.++||..+..+
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 47888888776644 35889999999999999999999985 578889999999999999988764
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.2e-09 Score=87.70 Aligned_cols=62 Identities=31% Similarity=0.487 Sum_probs=56.9
Q ss_pred HhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhh
Q 003189 127 KLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVG 190 (840)
Q Consensus 127 ~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~ 190 (840)
.+++++..||+.++ +++|++.||.|.++.++.+++|+.+|++|+++++++|++++++|++++
T Consensus 2 ~l~~~~~~GLs~~~--v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEE--AARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 36788888999876 999999999999999989999999999999999999999999998764
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.2e-08 Score=106.03 Aligned_cols=144 Identities=24% Similarity=0.320 Sum_probs=101.8
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----CC-ccccCh---h-hhc-CC-------------
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEGP---E-FRE-KS------------- 716 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~----~~-~~~~g~---~-~~~-~~------------- 716 (840)
.+.+.++++|++++++|+.+.++||++...+..+++++|+... ++ .+.... . +.. +.
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 4778899999999999999999999999999999999996421 11 111100 0 000 00
Q ss_pred -----------------------HHHHhhhcC----CceE-----EEecCc--ccHHHHHHHHHHhCC---CEEEEEcCC
Q 003189 717 -----------------------DEELSKLIP----KIQV-----MARSSP--MDKHTLVKHLRTTLG---EVVAVTGDG 759 (840)
Q Consensus 717 -----------------------~~~~~~~~~----~~~v-----~ar~~P--~~K~~~V~~l~~~~g---~~v~~~GDG 759 (840)
.+.....+. ...+ +....| .+|...++.+.+++| +.++++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 011111110 0111 111223 589999999988766 579999999
Q ss_pred ccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchH----HHHHHH
Q 003189 760 TNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST----IVTVAK 804 (840)
Q Consensus 760 ~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~----i~~~i~ 804 (840)
.||.+|++.|++|+||| ++.+.+|+.||.|..+++-.+ +..+++
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999 899999999999987777777 555443
|
catalyze the same reaction as SPP. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.7e-08 Score=106.46 Aligned_cols=68 Identities=28% Similarity=0.387 Sum_probs=59.7
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
.+|...++.+.+++| +.++++||+.||.+|++.|++|+||| ++.+..|+.||+|+.+++-.++..+++
T Consensus 198 ~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 198 NSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 568888888877666 56899999999999999999999999 788888999999998888888888775
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.6e-08 Score=103.35 Aligned_cols=114 Identities=27% Similarity=0.338 Sum_probs=90.7
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCc-------cccChhhhcCCHHHHhhhcCCceEEE
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI-------AIEGPEFREKSDEELSKLIPKIQVMA 731 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~-------~~~g~~~~~~~~~~~~~~~~~~~v~a 731 (840)
.+++|++.+.++.++++|.+|+++||-...-+..+|+.+|+...-.. +++|. +..
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~------------------v~g 137 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGR------------------VVG 137 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEece------------------eee
Confidence 68999999999999999999999999999999999999999753111 22222 333
Q ss_pred e-cCcccHHHHHHHHHHhCCC---EEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEec
Q 003189 732 R-SSPMDKHTLVKHLRTTLGE---VVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIIL 792 (840)
Q Consensus 732 r-~~P~~K~~~V~~l~~~~g~---~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivll 792 (840)
. +..+.|...++.+.+.+|. .+.++|||.||.|||+.|+.+++.+ +.+..+..|+..+-
T Consensus 138 ~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~~ 200 (212)
T COG0560 138 PICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRIW 200 (212)
T ss_pred eecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhcC
Confidence 3 4458899999888776674 5888999999999999999999985 45555666666553
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.9e-08 Score=98.65 Aligned_cols=99 Identities=18% Similarity=0.230 Sum_probs=82.2
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHH
Q 003189 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (840)
Q Consensus 667 ~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~ 746 (840)
.+|+.|+++|+++.++|+.+...+..+.+.+|+.. .|... ..|...++.+.
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~---------------------------~f~~~--kpkp~~~~~~~ 91 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR---------------------------FHEGI--KKKTEPYAQML 91 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------EEecC--CCCHHHHHHHH
Confidence 48999999999999999999999999999999964 33322 24445555555
Q ss_pred HhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCC
Q 003189 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795 (840)
Q Consensus 747 ~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~ 795 (840)
+++| +.++++||+.||.+|++.|++++||+ ++.+..|+.||+|..+.+
T Consensus 92 ~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~ 142 (169)
T TIGR02726 92 EEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARG 142 (169)
T ss_pred HHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCC
Confidence 5544 57999999999999999999999999 889999999999986444
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.4e-08 Score=95.96 Aligned_cols=97 Identities=20% Similarity=0.274 Sum_probs=82.4
Q ss_pred HHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHH
Q 003189 668 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747 (840)
Q Consensus 668 aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~ 747 (840)
+|++|++.|+++.++||++...+..+.+.+|+.. .+... ..|...++.+.+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------~~~~~--~~k~~~~~~~~~ 86 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------LYQGQ--SNKLIAFSDILE 86 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE---------------------------EEecc--cchHHHHHHHHH
Confidence 9999999999999999999999999999999864 23222 456777777655
Q ss_pred hCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccC
Q 003189 748 TLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDD 794 (840)
Q Consensus 748 ~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd 794 (840)
++| +.+.|+||+.||.+|++.|+++++|. .+.+..+..||+++..+
T Consensus 87 ~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~ 135 (154)
T TIGR01670 87 KLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIA 135 (154)
T ss_pred HcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCC
Confidence 544 67999999999999999999999998 78888999999999644
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.76 E-value=7.4e-08 Score=102.18 Aligned_cols=142 Identities=31% Similarity=0.428 Sum_probs=101.4
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----CC-cccc--Chhh--------------------
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIE--GPEF-------------------- 712 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~----~~-~~~~--g~~~-------------------- 712 (840)
++.+++.++|+++++.|+++.++||++...+..+.+++|+... ++ .++. |+.+
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~~~~~i~~~~~~~ 95 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLDLVEEILNFLKKH 95 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHHHHHHHHHHHHHc
Confidence 5788999999999999999999999999999999999987521 11 0000 0000
Q ss_pred ----------------------h--------------c---------------CCHH---HHhhhcC------CceE---
Q 003189 713 ----------------------R--------------E---------------KSDE---ELSKLIP------KIQV--- 729 (840)
Q Consensus 713 ----------------------~--------------~---------------~~~~---~~~~~~~------~~~v--- 729 (840)
. . ..++ ++.+.+. .+.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 175 (256)
T TIGR00099 96 GLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIEALNKLELEENVSVVSS 175 (256)
T ss_pred CcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHHHhhhhhhcCCEEEEEe
Confidence 0 0 0000 1111111 1211
Q ss_pred ---EEecCc--ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHH
Q 003189 730 ---MARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVT 801 (840)
Q Consensus 730 ---~ar~~P--~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~ 801 (840)
+-...| .+|...++.+.+.+| +.++++||+.||.+|++.|++|+||| ++.+..|+.||+++.+++-.+|..
T Consensus 176 ~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~ 254 (256)
T TIGR00099 176 GPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVAL 254 (256)
T ss_pred cCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhh
Confidence 112223 579999999988765 57999999999999999999999999 889999999999998877777665
Q ss_pred H
Q 003189 802 V 802 (840)
Q Consensus 802 ~ 802 (840)
+
T Consensus 255 ~ 255 (256)
T TIGR00099 255 A 255 (256)
T ss_pred h
Confidence 4
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=7.4e-08 Score=96.50 Aligned_cols=109 Identities=18% Similarity=0.229 Sum_probs=88.4
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHH
Q 003189 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (840)
Q Consensus 667 ~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~ 746 (840)
.+|+.|++.|+++.++||.+...+..+++++|+.. +|. ...+|...++.+.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~---------------------------~f~--g~~~k~~~l~~~~ 105 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH---------------------------LYQ--GQSNKLIAFSDLL 105 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------eec--CCCcHHHHHHHHH
Confidence 69999999999999999999999999999999863 333 2356777777776
Q ss_pred HhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccC----CchHHHHHHHH
Q 003189 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDD----NFSTIVTVAKW 805 (840)
Q Consensus 747 ~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd----~f~~i~~~i~~ 805 (840)
+++| +.++|+||+.||.+|++.|+++++++ .+.+..+..||+++-.. .+..+.+.+..
T Consensus 106 ~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~ 170 (183)
T PRK09484 106 EKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGAVREVCDLLLL 170 (183)
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCHHHHHHHHHHH
Confidence 6555 57999999999999999999999998 78888899999998532 24445555443
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.62 E-value=3.2e-07 Score=97.34 Aligned_cols=143 Identities=17% Similarity=0.130 Sum_probs=97.8
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCcc----CCC-ccccCh--h------hh--cCCHHH------
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT----DNG-IAIEGP--E------FR--EKSDEE------ 719 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~----~~~-~~~~g~--~------~~--~~~~~~------ 719 (840)
..+.+.++|+.|+++|++++++||+....+..+.+++|+.. .|+ .++... . +. .++.+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 44568999999999999999999999999999999999752 122 122110 0 00 011000
Q ss_pred -----------------------------------------------------HhhhcC--CceEE-----EecC--ccc
Q 003189 720 -----------------------------------------------------LSKLIP--KIQVM-----ARSS--PMD 737 (840)
Q Consensus 720 -----------------------------------------------------~~~~~~--~~~v~-----ar~~--P~~ 737 (840)
+.+.+. .+.+. -... -..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 000000 01111 0111 267
Q ss_pred HHHHHHHHHHhCC-----CEEEEEcCCccCHHHhhhCCccEEecCCCc---HHHHhh--c-CEEeccCCchHHHHHHH
Q 003189 738 KHTLVKHLRTTLG-----EVVAVTGDGTNDAPALHEADIGLAMGIAGT---EVAKES--A-DVIILDDNFSTIVTVAK 804 (840)
Q Consensus 738 K~~~V~~l~~~~g-----~~v~~~GDG~ND~~al~~Advgiamg~~g~---~~ak~~--a-Divlldd~f~~i~~~i~ 804 (840)
|...++.+.+++| +.+.++||+.||.+||+.|++|+||| ++. +..|+. | ++|..+++-.++..+++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 8888888877754 45999999999999999999999999 776 457876 4 58887888888888775
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.58 E-value=4.2e-07 Score=97.26 Aligned_cols=145 Identities=15% Similarity=0.098 Sum_probs=97.1
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCcc-----CCC-ccccChh--------h-h-cCCHHHH----
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT-----DNG-IAIEGPE--------F-R-EKSDEEL---- 720 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~-----~~~-~~~~g~~--------~-~-~~~~~~~---- 720 (840)
+-+.++++|++|+++|+++++.||+....+..+++++|+.. .|+ .++.... . . .++.+..
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 104 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQVL 104 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHHH
Confidence 45678999999999999999999999999999999999842 122 2221100 0 0 0111000
Q ss_pred ---------------------------------------------------------hhhcC--CceE-----EEecCc-
Q 003189 721 ---------------------------------------------------------SKLIP--KIQV-----MARSSP- 735 (840)
Q Consensus 721 ---------------------------------------------------------~~~~~--~~~v-----~ar~~P- 735 (840)
.+.+. .+.+ +-...|
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi~~~ 184 (271)
T PRK03669 105 NTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHVLDA 184 (271)
T ss_pred HHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEEecC
Confidence 00000 1111 111223
Q ss_pred -ccHHHHHHHHHHhCC------CEEEEEcCCccCHHHhhhCCccEEecCCCcHH-----HHhhcCEEeccCCchHHHHHH
Q 003189 736 -MDKHTLVKHLRTTLG------EVVAVTGDGTNDAPALHEADIGLAMGIAGTEV-----AKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 736 -~~K~~~V~~l~~~~g------~~v~~~GDG~ND~~al~~Advgiamg~~g~~~-----ak~~aDivlldd~f~~i~~~i 803 (840)
.+|...++.|.+.+| +.|+++||+.||.+||+.|++|+|||....+. .+..+|++....+-.++.+++
T Consensus 185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l 264 (271)
T PRK03669 185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGL 264 (271)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHH
Confidence 688888888877655 46899999999999999999999999333231 345789988877777888776
Q ss_pred HH
Q 003189 804 KW 805 (840)
Q Consensus 804 ~~ 805 (840)
++
T Consensus 265 ~~ 266 (271)
T PRK03669 265 DH 266 (271)
T ss_pred HH
Confidence 53
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=4.3e-07 Score=92.81 Aligned_cols=124 Identities=22% Similarity=0.296 Sum_probs=90.7
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC--CCccccChhhhcCCHHHHhhhcCCceEEE--ecCc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFREKSDEELSKLIPKIQVMA--RSSP 735 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~v~a--r~~P 735 (840)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+... +.....+.. .+.. -..|
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~----------------~i~~~~~~~p 130 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG----------------MITGYDLRQP 130 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC----------------eEECcccccc
Confidence 4689999999999999 99999999999999999999998531 000000000 0111 1247
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHH
Q 003189 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i 803 (840)
..|...++.++.. ++.+.|+|||.||.+|.+.|++|+..+ ...+.....++..+. +++..+...+
T Consensus 131 ~~k~~~l~~~~~~-~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~-~~~~el~~~l 195 (205)
T PRK13582 131 DGKRQAVKALKSL-GYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAV-HTYDELLAAI 195 (205)
T ss_pred chHHHHHHHHHHh-CCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCccccc-CCHHHHHHHH
Confidence 8899999999877 888999999999999999999999887 444444455666332 3477666554
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.54 E-value=4e-07 Score=92.60 Aligned_cols=118 Identities=22% Similarity=0.249 Sum_probs=83.8
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
+++|++.+.++.|++.|+++.++|+-....+..+++.+|+..-....+...+-.. .-|. .+....|..|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~--------~~p~--~~~~~~~~~k~ 149 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGF--------IQPD--GIVRVTFDNKG 149 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCe--------Eecc--eeeEEccccHH
Confidence 5899999999999999999999999999999999999997531100110000000 0011 11123466788
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcC
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD 788 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aD 788 (840)
..++.+.+++| +.+.++||+.||.+|++.|+++++++ .+....+.++|
T Consensus 150 ~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 150 EAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred HHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 88888766534 46899999999999999999999997 44444555554
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.52 E-value=3e-07 Score=85.61 Aligned_cols=119 Identities=19% Similarity=0.281 Sum_probs=97.0
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHH
Q 003189 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (840)
Q Consensus 667 ~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~ 746 (840)
-.|+.+.+.||++.++||.+..-++.=|+++||.. +|- --.+|....+.|.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~---------------------------~~q--G~~dK~~a~~~L~ 92 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH---------------------------LYQ--GISDKLAAFEELL 92 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------eee--chHhHHHHHHHHH
Confidence 37899999999999999999999999999999963 332 2368999998887
Q ss_pred HhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccC----CchHHHHHHHHHHHHHHHHHH
Q 003189 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDD----NFSTIVTVAKWGRSVYINIQK 815 (840)
Q Consensus 747 ~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd----~f~~i~~~i~~gR~~~~~i~k 815 (840)
++++ +.|+++||..||.|+|+..++++|+. .+.+..++.||+|+-.. -+..+.++|..++..++-.++
T Consensus 93 ~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~~~~ 167 (170)
T COG1778 93 KKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDEALG 167 (170)
T ss_pred HHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHHHHh
Confidence 7755 68999999999999999999999998 88888999999998644 244555666666665554443
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.2e-06 Score=93.92 Aligned_cols=67 Identities=22% Similarity=0.213 Sum_probs=54.2
Q ss_pred cHHHHHHHHHHhCC----CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHH----hhc-CEEe--ccCCchHHHHHHH
Q 003189 737 DKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAK----ESA-DVII--LDDNFSTIVTVAK 804 (840)
Q Consensus 737 ~K~~~V~~l~~~~g----~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak----~~a-Divl--ldd~f~~i~~~i~ 804 (840)
+|...++.+.+.+| +.|+++||+.||.+|++.|++|+||+ ++.+..| ..| +.+. ...+=.++..+++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 78888888876544 78999999999999999999999999 9998888 666 6777 3444566766654
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.43 E-value=4.3e-07 Score=87.28 Aligned_cols=105 Identities=24% Similarity=0.387 Sum_probs=77.8
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCcc----c--cChhhhcCCHHHHhhhcCCceEEEec
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA----I--EGPEFREKSDEELSKLIPKIQVMARS 733 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~----~--~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (840)
.+-|++++.++.|++.|.+|.++||--..-+..+|.++||+..+..+ . .|+ +..... --.-+
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk-~~gfd~-----------~~pts 155 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGK-YLGFDT-----------NEPTS 155 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCc-cccccc-----------CCccc
Confidence 46799999999999999999999999999999999999997532100 0 010 000000 00012
Q ss_pred CcccHHHHHHHHHHhCC-CEEEEEcCCccCHHHhhhCCccEEec
Q 003189 734 SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGLAMG 776 (840)
Q Consensus 734 ~P~~K~~~V~~l~~~~g-~~v~~~GDG~ND~~al~~Advgiamg 776 (840)
...-|...++.+++.+. ..++|+|||.||.+|+..||.=++.|
T Consensus 156 dsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 156 DSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred cCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 34689999999988643 68999999999999999988766655
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.36 E-value=4.2e-06 Score=86.81 Aligned_cols=125 Identities=26% Similarity=0.357 Sum_probs=86.7
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC----ccccChhhhcCCHHHHhhhcCCceEEEe---
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----IAIEGPEFREKSDEELSKLIPKIQVMAR--- 732 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~v~ar--- 732 (840)
+++|++.+.++.|++.|+++.++||.....+..+++.+|+...+- ...... -.+.+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~----------------g~~~g~~~~ 147 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDS----------------GEYAGFDEN 147 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCC----------------CcEECccCC
Confidence 378999999999999999999999999999999999999963110 000000 001111
Q ss_pred ---cCcccHHHHHHHHHHhCC-CEEEEEcCCccCHHHhhh--CCccEEecCCC-cHHHHhhcCEEeccCCchHHHHH
Q 003189 733 ---SSPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHE--ADIGLAMGIAG-TEVAKESADVIILDDNFSTIVTV 802 (840)
Q Consensus 733 ---~~P~~K~~~V~~l~~~~g-~~v~~~GDG~ND~~al~~--Advgiamg~~g-~~~ak~~aDivlldd~f~~i~~~ 802 (840)
+.+..|...++.+.+++| +.+.|+||+.||..|.+. ++++++.|... .+.....+|+++. ++..+.+.
T Consensus 148 ~~~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~~ 222 (224)
T PLN02954 148 EPTSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIEV 222 (224)
T ss_pred CcccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHHh
Confidence 112458888888877645 568899999999999888 56666665221 2334556899984 47766553
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.33 E-value=3.5e-06 Score=86.79 Aligned_cols=134 Identities=16% Similarity=0.154 Sum_probs=88.6
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC---CCccccChhhhcCCHHHHhhhcCCceEE--Eec
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD---NGIAIEGPEFREKSDEELSKLIPKIQVM--ARS 733 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~v~--ar~ 733 (840)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++.... +.....|..+... .|.-..+ ...
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~--------~p~~~~~~~~~~ 140 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHID--------WPHPCDGTCQNQ 140 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEe--------CCCCCccccccC
Confidence 47899999999999999999999999999999999888754321 1122223222110 0100000 001
Q ss_pred CcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhh--cCEEeccCCchHHHHHHH
Q 003189 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKES--ADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 734 ~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~--aDivlldd~f~~i~~~i~ 804 (840)
....|..+++.++.. .+.+.|+|||.||.+|++.||+.+|-+ .-.+-.++. +.+.+ ++|..|...++
T Consensus 141 cg~~K~~~l~~~~~~-~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 141 CGCCKPSLIRKLSEP-NDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred CCCCHHHHHHHHhhc-CCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 135799999998876 677899999999999999999988754 211211211 22222 45888876654
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.32 E-value=3.7e-06 Score=87.99 Aligned_cols=69 Identities=19% Similarity=0.214 Sum_probs=58.2
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcC----EEeccCCchHHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD----VIILDDNFSTIVTVAKW 805 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aD----ivlldd~f~~i~~~i~~ 805 (840)
..|...++.|.+++| +.++++||+.||.+||+.+++|++|+ ++.+..|+.|| +|.-.++=.++.+++.+
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 489999999988766 35888999999999999999999999 89999999999 77666566677777653
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.21 E-value=3.3e-06 Score=85.13 Aligned_cols=92 Identities=29% Similarity=0.320 Sum_probs=70.2
Q ss_pred cchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcc-c--HH
Q 003189 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM-D--KH 739 (840)
Q Consensus 663 ~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~-~--K~ 739 (840)
|++.+.|+.++++|++++++||+....+.++++.+|+...+....+- +.. .+....++.+|. + |.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~--~~~----------~~~~~~~~~~~~~~~~K~ 159 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL--FDN----------GGGIFTGRITGSNCGGKA 159 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE--ECT----------TCCEEEEEEEEEEESHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee--eec----------ccceeeeeECCCCCCcHH
Confidence 88889999999999999999999999999999999997521111100 000 012355666665 4 99
Q ss_pred HHHHHH------HHhCCCEEEEEcCCccCHHHhh
Q 003189 740 TLVKHL------RTTLGEVVAVTGDGTNDAPALH 767 (840)
Q Consensus 740 ~~V~~l------~~~~g~~v~~~GDG~ND~~al~ 767 (840)
..++.+ +.. .+.+.++|||.||.||||
T Consensus 160 ~~l~~~~~~~~~~~~-~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 160 EALKELYIRDEEDID-PDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHTHT-CCEEEEEESSGGGHHHHH
T ss_pred HHHHHHHHHhhcCCC-CCeEEEEECCHHHHHHhC
Confidence 999999 223 588999999999999986
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.18 E-value=8.5e-06 Score=84.28 Aligned_cols=128 Identities=24% Similarity=0.369 Sum_probs=92.0
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCccc
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (840)
...+-|++++++..|+++|++..++|+++...+..+.+..|+......++.+...... .-.|..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~----------------KP~P~~ 150 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPP----------------KPDPEP 150 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCC----------------CcCHHH
Confidence 4567899999999999999999999999999999999999997643333222221100 012333
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCC---ccEEecCC-CcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD---IGLAMGIA-GTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 738 K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Ad---vgiamg~~-g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
...+.+.+... .+.++||||..+|+.|-++|+ ||+..|.+ ........+|+++- ++..+...+.
T Consensus 151 l~~~~~~~~~~-~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~--~~~el~~~l~ 218 (220)
T COG0546 151 LLLLLEKLGLD-PEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVID--SLAELLALLA 218 (220)
T ss_pred HHHHHHHhCCC-hhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEEC--CHHHHHHHHh
Confidence 33444444322 246999999999999999998 77888843 45667777999984 4877776553
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.15 E-value=1.9e-05 Score=83.32 Aligned_cols=146 Identities=17% Similarity=0.185 Sum_probs=97.5
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC------CCc-cc-cChh------------------
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD------NGI-AI-EGPE------------------ 711 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~------~~~-~~-~g~~------------------ 711 (840)
..+..|...++++++++.|+.++++||.....++.+.+++++..+ ++- ++ .|..
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 456779999999999999999999999999999999999997643 221 11 1100
Q ss_pred hh-------cC-----------------CHH-------HHhhhcC----CceE-EE-----ecCc--ccHHHHHHHHHHh
Q 003189 712 FR-------EK-----------------SDE-------ELSKLIP----KIQV-MA-----RSSP--MDKHTLVKHLRTT 748 (840)
Q Consensus 712 ~~-------~~-----------------~~~-------~~~~~~~----~~~v-~a-----r~~P--~~K~~~V~~l~~~ 748 (840)
+. .+ ..+ ++.+.+. ++.+ .+ ...| ..|...++.+.++
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 00 00 000 0111111 1211 11 2233 6899999999887
Q ss_pred CC---CEEEEEcCCccCHHHhhh-CCccEEecCCCcHHHHhhcC-------EEeccCCchHHHHHHH
Q 003189 749 LG---EVVAVTGDGTNDAPALHE-ADIGLAMGIAGTEVAKESAD-------VIILDDNFSTIVTVAK 804 (840)
Q Consensus 749 ~g---~~v~~~GDG~ND~~al~~-Advgiamg~~g~~~ak~~aD-------ivlldd~f~~i~~~i~ 804 (840)
+| +.|+++||+.||.+|++. ++.|++|+ ++.+..|+.++ ++.-.-.-+++.++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 66 679999999999999998 67999999 88888786543 4333333455655554
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.15 E-value=6.3e-06 Score=81.95 Aligned_cols=98 Identities=24% Similarity=0.331 Sum_probs=70.8
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC--CCccc--cChhhhcCCHHHHhhhcCCceEEEecCc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAI--EGPEFREKSDEELSKLIPKIQVMARSSP 735 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~--~~~~~--~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (840)
+++|++.+.++.|++.|+++.++||.....+..+++.+|+..- +.... +| .+. .+...-....+
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g-~~~-----------g~~~~~~~~~~ 140 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNG-LLT-----------GPIEGQVNPEG 140 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCC-EEe-----------CccCCcccCCc
Confidence 3689999999999999999999999999999999999998631 00101 01 000 00000012446
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhC
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEA 769 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~A 769 (840)
..|...++.+++..| +.+.++|||.||.+|++.|
T Consensus 141 ~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 141 ECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred chHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 889999998776533 4689999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.13 E-value=9.3e-06 Score=82.70 Aligned_cols=107 Identities=16% Similarity=0.158 Sum_probs=78.1
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC--ccccChhhhcCCHHHHhhhcCCceEE-EecC
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGPEFREKSDEELSKLIPKIQVM-ARSS 734 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~-ar~~ 734 (840)
..+++|++.+.++.+++.|+++.++|+.....+..+++.+|+..--. +...... .+. .+ +. -.+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g-------~~~---g~--~~~~~~~ 152 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDG-------IYT---GN--IDGNNCK 152 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCC-------EEe---CC--ccCCCCC
Confidence 45689999999999999999999999999999999999999853100 1110000 000 00 00 1134
Q ss_pred cccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEec
Q 003189 735 PMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMG 776 (840)
Q Consensus 735 P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg 776 (840)
+..|...++.+.+..| +.+.++||+.+|.||++.|+.++++.
T Consensus 153 g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 5788888888765534 36888999999999999999999886
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.5e-05 Score=82.48 Aligned_cols=130 Identities=20% Similarity=0.192 Sum_probs=84.5
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC----CccccChhhhcCCHHHHhhhcCCceEE---Ee
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN----GIAIEGPEFREKSDEELSKLIPKIQVM---AR 732 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~v~---ar 732 (840)
+++||+.+.++.|++.|+++.++|+-....+..+.+.+ +.... ....+|..+.. ..|.-... .+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~--------~kp~p~~~~~~~~ 144 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITI--------TWPHPCDEHCQNH 144 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEE--------eccCCcccccccc
Confidence 68999999999999999999999999999999999988 64311 11122221110 00000000 00
Q ss_pred cCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhh--cCEEeccCCchHHHHHH
Q 003189 733 SSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKES--ADVIILDDNFSTIVTVA 803 (840)
Q Consensus 733 ~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~--aDivlldd~f~~i~~~i 803 (840)
+ ...|..+++.++.. ...+.|+|||.||.+|.+.||+.++-+ .-.+.+++. +.+.+ ++|..|...+
T Consensus 145 ~-~~~K~~~l~~~~~~-~~~~i~iGDs~~Di~aa~~Ag~~~a~~-~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 145 C-GCCKPSLIRKLSDT-NDFHIVIGDSITDLEAAKQADKVFARD-FLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred C-CCchHHHHHHhccC-CCCEEEEeCCHHHHHHHHHCCcceeHH-HHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 0 13488888888766 667899999999999999999977633 111222222 44433 4577777665
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.4e-05 Score=80.20 Aligned_cols=114 Identities=18% Similarity=0.200 Sum_probs=77.8
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCC-ceEEEe-cCcc
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPK-IQVMAR-SSPM 736 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~v~ar-~~P~ 736 (840)
-+++|++.+.++.|++.|+++.++|+.+......+.+..|+...-..++..+.... . .......+. +.++.. ....
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~-~-~g~~~~~~~~~~~~~~~~~g~ 148 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFD-N-DGRHIVWPHHCHGCCSCPCGC 148 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceEC-C-CCcEEEecCCCCccCcCCCCC
Confidence 47899999999999999999999999999999999999998642222222211110 0 000000011 001111 1124
Q ss_pred cHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEE
Q 003189 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (840)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgia 774 (840)
.|..+++.+++.+.+.+.++|||.||.+|.++||+-+|
T Consensus 149 ~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 149 CKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 69999999877534678999999999999999998765
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.06 E-value=2.1e-05 Score=81.57 Aligned_cols=125 Identities=25% Similarity=0.377 Sum_probs=86.5
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
-++.|++.+.++.|++.|+++.++|+........+.+.+|+......++.+... ....|.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~------------------~~~kp~-- 151 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSL------------------PNKKPD-- 151 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCC------------------CCCCcC--
Confidence 457899999999999999999999999999999999999986432222221110 112222
Q ss_pred HHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCc-cEEe--cCC-CcHHHHhhcCEEeccCCchHHHHHHHH
Q 003189 739 HTLVKHLRTTL---GEVVAVTGDGTNDAPALHEADI-GLAM--GIA-GTEVAKESADVIILDDNFSTIVTVAKW 805 (840)
Q Consensus 739 ~~~V~~l~~~~---g~~v~~~GDG~ND~~al~~Adv-giam--g~~-g~~~ak~~aDivlldd~f~~i~~~i~~ 805 (840)
...++.+.+++ .+.+.++||+.||..+.+.|++ +|.+ |.. ..+.....+|+++ +++..+...+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 152 PAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred hHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 22333333332 3578999999999999999998 4444 321 2344556789888 559988887654
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.04 E-value=2.1e-05 Score=81.49 Aligned_cols=43 Identities=12% Similarity=0.143 Sum_probs=38.9
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~ 700 (840)
.+..-++++++|++|+++|++++++||.....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4556678999999999999999999999999999999999974
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.95 E-value=9.4e-05 Score=83.52 Aligned_cols=140 Identities=20% Similarity=0.201 Sum_probs=92.4
Q ss_pred chHHHH-HHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC-ccccChhhh----------------------------
Q 003189 664 GVKESV-AICRSAGITVRMVTGDNINTAKAIARECGILTDNG-IAIEGPEFR---------------------------- 713 (840)
Q Consensus 664 ~~~~aI-~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~-~~~~g~~~~---------------------------- 713 (840)
....++ +++++.|+.+++.||+.......+.++.++..+.- ++-+|.++.
T Consensus 32 ~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~ 111 (413)
T PLN02382 32 LRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEET 111 (413)
T ss_pred HHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHH
Confidence 344555 88999999999999999999999999999876521 000111000
Q ss_pred -cC--------------------CHH-------HHhhhcC----CceEE------EecCc--ccHHHHHHHHHHhC---C
Q 003189 714 -EK--------------------SDE-------ELSKLIP----KIQVM------ARSSP--MDKHTLVKHLRTTL---G 750 (840)
Q Consensus 714 -~~--------------------~~~-------~~~~~~~----~~~v~------ar~~P--~~K~~~V~~l~~~~---g 750 (840)
.+ .++ ++.+.+. ++.+. -...| ..|...++.|.+++ |
T Consensus 112 ~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~g 191 (413)
T PLN02382 112 SKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEG 191 (413)
T ss_pred hcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcC
Confidence 00 010 1111110 12211 12334 57999999998886 4
Q ss_pred ---CEEEEEcCCccCHHHhhhCC-ccEEecCCCcHHHHhhc--------CEEec-cCCchHHHHHHH
Q 003189 751 ---EVVAVTGDGTNDAPALHEAD-IGLAMGIAGTEVAKESA--------DVIIL-DDNFSTIVTVAK 804 (840)
Q Consensus 751 ---~~v~~~GDG~ND~~al~~Ad-vgiamg~~g~~~ak~~a--------Divll-dd~f~~i~~~i~ 804 (840)
+.++++||+.||.+||+.|+ .||||| ++.+..|+.+ +++.. +.+-.+|.++++
T Consensus 192 i~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~ 257 (413)
T PLN02382 192 KAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIG 257 (413)
T ss_pred CChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHH
Confidence 57899999999999999999 699999 8888888743 55544 334556666654
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.0001 Score=76.29 Aligned_cols=40 Identities=15% Similarity=0.171 Sum_probs=36.4
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~ 700 (840)
.-+.++++|+.++++|++++++||.....+..+.+++|+.
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3344899999999999999999999999999999999975
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.84 E-value=6.4e-05 Score=76.77 Aligned_cols=122 Identities=22% Similarity=0.332 Sum_probs=83.2
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++.|+++.++|+.....+..+.+..|+...-..++...+ + ....| |.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~-----------------~-~~~KP--~~ 134 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDE-----------------V-PRPKP--AP 134 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCc-----------------C-CCCCC--Ch
Confidence 6789999999999999999999999999999999999998542111111111 0 01122 23
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEE---ecC-CCcHHHHhhcCEEeccCCchHHHHHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA---MGI-AGTEVAKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgia---mg~-~g~~~ak~~aDivlldd~f~~i~~~i 803 (840)
.+++...+++| +.++|+||+.+|..+.++|++... -|. ...+..++.+|+++ +++..+..++
T Consensus 135 ~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 135 DIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 33333333324 679999999999999999998633 331 22344667899987 4477766554
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00013 Score=77.66 Aligned_cols=137 Identities=13% Similarity=0.273 Sum_probs=89.6
Q ss_pred CCCcchHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHHcCCc--cCCCccc---cCh-----------------------
Q 003189 660 PMRPGVKESVAICRS-AGITVRMVTGDNINTAKAIARECGIL--TDNGIAI---EGP----------------------- 710 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~-aGi~v~m~TGD~~~ta~~iA~~~Gi~--~~~~~~~---~g~----------------------- 710 (840)
.+-++++++|+.|++ .|+.++++||+....+..+.+.+++. ..++..+ .+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 455889999999998 79999999999999999888877642 2222110 000
Q ss_pred -----hh-----------hcCC--HHH---H----hhhcCCceEE-----EecCc--ccHHHHHHHHHHhCC---CEEEE
Q 003189 711 -----EF-----------REKS--DEE---L----SKLIPKIQVM-----ARSSP--MDKHTLVKHLRTTLG---EVVAV 755 (840)
Q Consensus 711 -----~~-----------~~~~--~~~---~----~~~~~~~~v~-----ar~~P--~~K~~~V~~l~~~~g---~~v~~ 755 (840)
.+ +... ++. + .+..+...+. ....| .+|...++.+.+.+| +.+.+
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 00 0000 111 1 1111111111 12233 689999999887765 57888
Q ss_pred EcCCccCHHHhhhC----CccEEecCCCcHHHHhhcCEEeccCCchHHHHHH
Q 003189 756 TGDGTNDAPALHEA----DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 756 ~GDG~ND~~al~~A----dvgiamg~~g~~~ak~~aDivlldd~f~~i~~~i 803 (840)
+||+.||.+||+.+ +.||+|| ++. ..|++.|.+ ...+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~~--~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLAG--VPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCCC--HHHHHHHH
Confidence 99999999999999 9999999 553 447887753 66665554
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.81 E-value=4e-05 Score=71.85 Aligned_cols=114 Identities=20% Similarity=0.131 Sum_probs=70.5
Q ss_pred cccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCc
Q 003189 656 GIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (840)
Q Consensus 656 ~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (840)
....++++++.+.+++|++.|++++++||.....+....+.+|+......++......................+.+-.|
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNP 99 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCH
Confidence 44568999999999999999999999999999999999999998432222221111100000000000001112222333
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCC
Q 003189 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Ad 770 (840)
..+..+.+.+... .+.+.++||+.||.+|++.+.
T Consensus 100 ~~~~~~~~~~~~~-~~~~~~igD~~~d~~~~~~~g 133 (139)
T cd01427 100 DKLLAALKLLGVD-PEEVLMVGDSLNDIEMAKAAG 133 (139)
T ss_pred HHHHHHHHHcCCC-hhhEEEeCCCHHHHHHHHHcC
Confidence 3344444444332 467999999999999999843
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00016 Score=82.77 Aligned_cols=98 Identities=20% Similarity=0.288 Sum_probs=75.6
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
|++|++.+.+++++++|+++.++|+-+...+..+++.+|+.+ .++.+++ ..++.|+.|.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd---~Vigsd~------------------~~~~kg~~K~ 130 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD---GVFASDG------------------TTNLKGAAKA 130 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC---EEEeCCC------------------ccccCCchHH
Confidence 588999999999999999999999999999999999999832 2222211 1135677787
Q ss_pred HHHHHHHHhCCCE-EEEEcCCccCHHHhhhCCccEEecCCCcHH
Q 003189 740 TLVKHLRTTLGEV-VAVTGDGTNDAPALHEADIGLAMGIAGTEV 782 (840)
Q Consensus 740 ~~V~~l~~~~g~~-v~~~GDG~ND~~al~~Advgiamg~~g~~~ 782 (840)
..++. .+|+. +.++||..||.|+++.|+-.++++ .+...
T Consensus 131 ~~l~~---~l~~~~~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~l 170 (479)
T PRK08238 131 AALVE---AFGERGFDYAGNSAADLPVWAAARRAIVVG-ASPGV 170 (479)
T ss_pred HHHHH---HhCccCeeEecCCHHHHHHHHhCCCeEEEC-CCHHH
Confidence 65553 22433 678899999999999999999997 54444
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00029 Score=74.15 Aligned_cols=43 Identities=7% Similarity=0.034 Sum_probs=38.9
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT 701 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~ 701 (840)
+..-+.++++|++|+++||.+++.||........+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3456779999999999999999999999999999999999853
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00023 Score=76.06 Aligned_cols=122 Identities=19% Similarity=0.318 Sum_probs=83.9
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCccc-
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD- 737 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~- 737 (840)
.++.|++.++++.|++.|+++.++|+.+...+..+..+.|+......++.+ ...+..
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~----------------------d~~~~~K 157 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGG----------------------DTLPQKK 157 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEec----------------------CCCCCCC
Confidence 478899999999999999999999999999999998888885421111111 112222
Q ss_pred -HHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc-EEe--cC-CCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 738 -KHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG-LAM--GI-AGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 738 -K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg-iam--g~-~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
+...++.+.+++| +.+.|+||+.||..+.+.|++. +.+ |- ...+..+..+|.++ +++..+..++.
T Consensus 158 p~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~~ 230 (272)
T PRK13223 158 PDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGCA 230 (272)
T ss_pred CCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHHh
Confidence 2234444333334 5789999999999999999973 333 31 12223445799988 45888876644
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.0006 Score=71.90 Aligned_cols=134 Identities=15% Similarity=0.205 Sum_probs=86.9
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccCh-hhhcCCHHHHhhhcCCceEEEe----
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGP-EFREKSDEELSKLIPKIQVMAR---- 732 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~v~ar---- 732 (840)
.-++|||+.+.++.|++.|+++.++||-....+..+.+++|+...+..++... .|. ++. +...
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~---~dG---------vltG~~~P 186 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFD---EDG---------VLKGFKGP 186 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEEC---CCC---------eEeCCCCC
Confidence 35689999999999999999999999999999999999999864432221000 000 000 1111
Q ss_pred -cCcccHHHHHHH-HHHhCC-----CEEEEEcCCccCHHHhhhC-C--ccEEecC-C-C----cHHHHhhcCEEeccCCc
Q 003189 733 -SSPMDKHTLVKH-LRTTLG-----EVVAVTGDGTNDAPALHEA-D--IGLAMGI-A-G----TEVAKESADVIILDDNF 796 (840)
Q Consensus 733 -~~P~~K~~~V~~-l~~~~g-----~~v~~~GDG~ND~~al~~A-d--vgiamg~-~-g----~~~ak~~aDivlldd~f 796 (840)
+....|...+.. ..+.+| ..+.++|||.||++|..-. . --+..|- + - .+.-+++=||||.+|.=
T Consensus 187 ~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t 266 (277)
T TIGR01544 187 LIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDET 266 (277)
T ss_pred cccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCC
Confidence 011456665442 333333 6788999999999996544 1 1223331 1 1 12356789999999987
Q ss_pred hHHHHHH
Q 003189 797 STIVTVA 803 (840)
Q Consensus 797 ~~i~~~i 803 (840)
..++..+
T Consensus 267 ~~v~~~i 273 (277)
T TIGR01544 267 LEVANSI 273 (277)
T ss_pred chHHHHH
Confidence 7777665
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00024 Score=73.12 Aligned_cols=122 Identities=19% Similarity=0.207 Sum_probs=82.2
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|+++|+++.++|+.....+..+.+..|+...-..++.+++. .+..| |.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~------------------~~~Kp--~p 141 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDV------------------EHAKP--DP 141 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcC------------------CCCCC--Cc
Confidence 36799999999999999999999999999999999999986422222221110 11122 22
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc---EEecCCCc-HHHHhhcCEEeccCCchHHHHHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG---LAMGIAGT-EVAKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg---iamg~~g~-~~ak~~aDivlldd~f~~i~~~i 803 (840)
..++.+.+++| +.+.|+||+.+|..+-++|++- +.-|.... +.....+|+++- ++..+...+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 142 EPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred HHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHHHH
Confidence 33333333323 5689999999999999999984 33341122 233456898874 488777654
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00021 Score=73.28 Aligned_cols=120 Identities=19% Similarity=0.283 Sum_probs=80.7
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++.|+++.++|+.+...+..+.+..|+...-..++.+.+. .+..| +-
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~------------------~~~Kp--~p 144 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSL------------------AQRKP--HP 144 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCC------------------CCCCC--Ch
Confidence 57899999999999999999999999999999999999986422222211110 01122 22
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEE-e--cCCC-cHHHHhhcCEEeccCCchHHHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA-M--GIAG-TEVAKESADVIILDDNFSTIVT 801 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgia-m--g~~g-~~~ak~~aDivlldd~f~~i~~ 801 (840)
..+..+.+++| +.++|+||+.||..+.+.|++-.. + |-.. .+.....+|+++- ++..+..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~--~~~~l~~ 211 (213)
T TIGR01449 145 DPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYD--SLNELPP 211 (213)
T ss_pred HHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeC--CHHHHHh
Confidence 33333333334 568999999999999999998643 2 3111 2233456898874 3666554
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00045 Score=71.47 Aligned_cols=120 Identities=18% Similarity=0.261 Sum_probs=81.0
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
-++.|++.+.++.|++.|+++.++|+........+.+.+||......++.+.+.. ...|.
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------------------~~Kp~-- 150 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLP------------------YSKPH-- 150 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCC------------------CCCCC--
Confidence 3578999999999999999999999999999999999999865332222222110 11232
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCC---cHHHHhhcCEEeccCCchHHH
Q 003189 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAG---TEVAKESADVIILDDNFSTIV 800 (840)
Q Consensus 739 ~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g---~~~ak~~aDivlldd~f~~i~ 800 (840)
-..++.+.+++| +.+.|+||..||+++.+.|++....-..+ .+.-...+|+++. +|..+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~--~~~dl~ 216 (222)
T PRK10826 151 PEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLE--SLTELT 216 (222)
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheecc--CHHHHh
Confidence 224444333335 56899999999999999999864432122 2222345788773 366654
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00043 Score=70.61 Aligned_cols=116 Identities=23% Similarity=0.414 Sum_probs=78.7
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcC--CccCCCccc--cChhh-hc--------------------
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECG--ILTDNGIAI--EGPEF-RE-------------------- 714 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~G--i~~~~~~~~--~g~~~-~~-------------------- 714 (840)
++.+.+.+++++|++.|+.+.++||.....+..+.++++ +...++..+ .+... ..
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELK 96 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccccHHHHHHhhhhcCceee
Confidence 577899999999999999999999999999999998754 222232111 01000 00
Q ss_pred -C-------------------------CHH---HHhhhc-------CCceEEE------ecCc--ccHHHHHHHHHHhCC
Q 003189 715 -K-------------------------SDE---ELSKLI-------PKIQVMA------RSSP--MDKHTLVKHLRTTLG 750 (840)
Q Consensus 715 -~-------------------------~~~---~~~~~~-------~~~~v~a------r~~P--~~K~~~V~~l~~~~g 750 (840)
+ .+. ++...+ +.+.+.. ...| .+|...++.+.+++|
T Consensus 97 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~ 176 (204)
T TIGR01484 97 SLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKELN 176 (204)
T ss_pred eeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhC
Confidence 0 000 000000 1222321 1233 899999999887755
Q ss_pred ---CEEEEEcCCccCHHHhhhCCccEEe
Q 003189 751 ---EVVAVTGDGTNDAPALHEADIGLAM 775 (840)
Q Consensus 751 ---~~v~~~GDG~ND~~al~~Advgiam 775 (840)
+.++++||+.||.+|++.+++|+||
T Consensus 177 ~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 177 GKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 5699999999999999999999998
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00061 Score=79.49 Aligned_cols=40 Identities=8% Similarity=0.179 Sum_probs=36.4
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~ 700 (840)
.-+.++++|+.|+++|+.++++||+....+..+++++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 3456799999999999999999999999999999999974
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00068 Score=70.56 Aligned_cols=125 Identities=19% Similarity=0.213 Sum_probs=82.8
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCccc--
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD-- 737 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~-- 737 (840)
++.|++.+.++.|++.|+++.++|+.+...+..+-+..|+......++.+.+. .+..|.-
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~------------------~~~KP~p~~ 156 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTL------------------AERKPHPLP 156 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcC------------------CCCCCCHHH
Confidence 57899999999999999999999999998888888889986432222222110 0112211
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEE---ecCC-Cc-HHHHhhcCEEeccCCchHHHHHHHH
Q 003189 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA---MGIA-GT-EVAKESADVIILDDNFSTIVTVAKW 805 (840)
Q Consensus 738 K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgia---mg~~-g~-~~ak~~aDivlldd~f~~i~~~i~~ 805 (840)
=..+++.+.-. .+.+.|+||+.||..+-+.|++... -|-. .. +..+..+|+++ +++..|.+.+.|
T Consensus 157 ~~~~~~~l~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~~~~ 226 (229)
T PRK13226 157 LLVAAERIGVA-PTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNPATW 226 (229)
T ss_pred HHHHHHHhCCC-hhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHHhcC
Confidence 12223333222 3679999999999999999998632 2311 11 22345699988 448888776655
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0009 Score=70.50 Aligned_cols=53 Identities=23% Similarity=0.332 Sum_probs=44.3
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcC----CccCHHHhhhC-CccEEecCCCcHHHHhhcCEE
Q 003189 736 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHEA-DIGLAMGIAGTEVAKESADVI 790 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~~GD----G~ND~~al~~A-dvgiamg~~g~~~ak~~aDiv 790 (840)
.+|..-++.|.++ -+.|+++|| |.||.+||+.| -.|++++ ++.+..|..+.++
T Consensus 187 vsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~ 244 (247)
T PTZ00174 187 WDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELF 244 (247)
T ss_pred CcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHh
Confidence 6899999999887 678999999 99999999976 5677777 8888888876654
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0012 Score=67.61 Aligned_cols=107 Identities=13% Similarity=0.125 Sum_probs=74.0
Q ss_pred CCCcchHHHHH-HHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 660 PMRPGVKESVA-ICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 660 ~lR~~~~~aI~-~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
.++|++.+.|+ .+++.|++++++|+-....+..+|+..|+..... ++ |.++..... .++ .-..|.-++|
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~-~i-~t~le~~~g-------g~~-~g~~c~g~~K 163 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLN-LI-ASQIERGNG-------GWV-LPLRCLGHEK 163 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCc-EE-EEEeEEeCC-------ceE-cCccCCChHH
Confidence 46899999995 7888999999999999999999999966633211 11 222221000 000 1123556888
Q ss_pred HHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEec
Q 003189 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 776 (840)
Q Consensus 739 ~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg 776 (840)
...++..-....+...+-||+.||.|||+.||..++++
T Consensus 164 v~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 164 VAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred HHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 88777543211244567899999999999999999985
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0014 Score=70.04 Aligned_cols=119 Identities=18% Similarity=0.277 Sum_probs=82.3
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++.|+++.++|+.+...+..+-+.+|+...-..++.+.+ .+ .|.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~----------------------~~-~k~ 198 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTP----------------------IL-SKR 198 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCC----------------------CC-CCH
Confidence 5679999999999999999999999999999999999998643222222111 11 233
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEE---ecCCCc-HHHHhhcCEEeccCCchHHHHHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA---MGIAGT-EVAKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgia---mg~~g~-~~ak~~aDivlldd~f~~i~~~i 803 (840)
..+..+.+++| +.++|+||+.+|..+-++|++-.. -|.... +.....+|+++ +++..+.+.+
T Consensus 199 ~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 199 RALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 34443333323 568999999999999999998533 231111 12344699988 4588887754
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0018 Score=66.48 Aligned_cols=107 Identities=15% Similarity=0.077 Sum_probs=73.6
Q ss_pred CCCcchHHHH-HHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 660 PMRPGVKESV-AICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 660 ~lR~~~~~aI-~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
+++|++.+.| +.+++.|+++.++|+-...-+..+++.+|+.... .++ |.++.. ....-..-..|..+.|
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-~~i-~t~l~~--------~~tg~~~g~~c~g~~K 164 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-NLI-ASQMQR--------RYGGWVLTLRCLGHEK 164 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-ceE-EEEEEE--------EEccEECCccCCChHH
Confidence 4589999999 5788899999999999999999999999963211 111 222211 0000001112556888
Q ss_pred HHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEec
Q 003189 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 776 (840)
Q Consensus 739 ~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg 776 (840)
...++..-.......-+-||+.||.|||+.|+..++++
T Consensus 165 ~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 165 VAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred HHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 88777542111344557799999999999999999985
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0018 Score=66.84 Aligned_cols=122 Identities=25% Similarity=0.347 Sum_probs=81.9
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCc--cCCCccccChhhhcCCHHHHhhhcCCceEEEecCcc
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL--TDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~ 736 (840)
.++.||+.+.++.|++.|+++.++|+-....+..+.+.+|+. .....++.+.+.. +..|
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~------------------~~KP- 146 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVA------------------AGRP- 146 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCC------------------CCCC-
Confidence 478999999999999999999999999999999999999986 3322333322210 1123
Q ss_pred cHHHHHHHHHHhCC----CEEEEEcCCccCHHHhhhCCccEE-ecCCCc---H-HHHhhcCEEeccCCchHHHHH
Q 003189 737 DKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADIGLA-MGIAGT---E-VAKESADVIILDDNFSTIVTV 802 (840)
Q Consensus 737 ~K~~~V~~l~~~~g----~~v~~~GDG~ND~~al~~Advgia-mg~~g~---~-~ak~~aDivlldd~f~~i~~~ 802 (840)
+-.+.....+++| +.+.|+||+.+|..+-+.|++..+ +-..|. + .....+|+++ +++..+..+
T Consensus 147 -~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~~ 218 (220)
T TIGR03351 147 -APDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPAL 218 (220)
T ss_pred -CHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHHh
Confidence 2223333222223 469999999999999999999862 211222 1 2234578877 347766554
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.002 Score=68.30 Aligned_cols=120 Identities=15% Similarity=0.220 Sum_probs=80.4
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++.|+++.++|+.....+..+-+.+|+......++.+.+.. +..|. .
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~------------------~~KP~--P 168 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVY------------------RGKPD--P 168 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCC------------------CCCCC--H
Confidence 468999999999999999999999999999999999999865433444443321 11222 2
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccE-EecCCCcHHHHhhcCEEeccCCchHHHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL-AMGIAGTEVAKESADVIILDDNFSTIVT 801 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgi-amg~~g~~~ak~~aDivlldd~f~~i~~ 801 (840)
.+.....+++| +.++|+||..+|..+-+.|++-. ++...........+|+++. ++..+..
T Consensus 169 e~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~--~~~el~~ 232 (260)
T PLN03243 169 EMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVR--RLDDLSV 232 (260)
T ss_pred HHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeC--CHHHHHH
Confidence 22222222224 56899999999999999999843 3221222222345788873 4666543
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0028 Score=66.83 Aligned_cols=118 Identities=14% Similarity=0.117 Sum_probs=78.8
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcc--c
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM--D 737 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~--~ 737 (840)
++.|++.+.++.|++.|+++.++|+-+...+..+-+.+|+......++.+.+.. +..|. -
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~------------------~~KP~p~~ 169 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECE------------------HAKPHPDP 169 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCC------------------CCCCChHH
Confidence 468999999999999999999999999999999999999875433333333311 11222 1
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEE---ecCCCcHHHHhhcCEEeccCCchH
Q 003189 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA---MGIAGTEVAKESADVIILDDNFST 798 (840)
Q Consensus 738 K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgia---mg~~g~~~ak~~aDivlldd~f~~ 798 (840)
=....+.+.-. .+.+.|+||..+|..+-++|++-.. -|....+.....+|+++.+ +..
T Consensus 170 ~~~a~~~~~~~-~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~--~~e 230 (248)
T PLN02770 170 YLKALEVLKVS-KDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD--YED 230 (248)
T ss_pred HHHHHHHhCCC-hhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc--chh
Confidence 12222222212 2568999999999999999997532 2311122234468988744 655
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0029 Score=66.91 Aligned_cols=93 Identities=20% Similarity=0.248 Sum_probs=67.4
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC-CccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
++.||+.+.++.|++.|+++.++|+.....+..+-+.+|+.... ..++.+.+. .+..|. .
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~------------------~~~KP~-p 159 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDV------------------PAGRPA-P 159 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccC------------------CCCCCC-H
Confidence 46799999999999999999999999999999999999986531 223322221 011232 2
Q ss_pred HHHHHHHHHhCC----CEEEEEcCCccCHHHhhhCCcc
Q 003189 739 HTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADIG 772 (840)
Q Consensus 739 ~~~V~~l~~~~g----~~v~~~GDG~ND~~al~~Advg 772 (840)
..+.+.+++. | +.+.|+||..+|..+-+.|++-
T Consensus 160 ~~~~~a~~~l-~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 160 WMALKNAIEL-GVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHHc-CCCCchheEEECCcHHHHHHHHHCCCe
Confidence 3344444443 4 3589999999999999999974
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0058 Score=74.65 Aligned_cols=170 Identities=18% Similarity=0.256 Sum_probs=103.7
Q ss_pred HHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecc--cCCCCcchHHHHHHHHh-CCCEEEEEcCCCHH
Q 003189 612 LNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGI--KDPMRPGVKESVAICRS-AGITVRMVTGDNIN 688 (840)
Q Consensus 612 ~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~--~D~lR~~~~~aI~~l~~-aGi~v~m~TGD~~~ 688 (840)
++.....|.....|.+++-| |.|++....- ...+.+++.++++.|.+ .|+.|+++||+...
T Consensus 480 ~~~~~~~y~~~~~rLi~~D~----------------DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~ 543 (726)
T PRK14501 480 AEEIIARYRAASRRLLLLDY----------------DGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRD 543 (726)
T ss_pred HHHHHHHHHhccceEEEEec----------------CccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHH
Confidence 44555666666667777642 3444433211 12367899999999999 59999999999999
Q ss_pred HHHHHHHHcCC--ccCCCccc--cChhhhc-----------------------------------------CCH------
Q 003189 689 TAKAIARECGI--LTDNGIAI--EGPEFRE-----------------------------------------KSD------ 717 (840)
Q Consensus 689 ta~~iA~~~Gi--~~~~~~~~--~g~~~~~-----------------------------------------~~~------ 717 (840)
.........++ ..+++..+ .|..+.. ..+
T Consensus 544 ~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~ 623 (726)
T PRK14501 544 TLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEAR 623 (726)
T ss_pred HHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHH
Confidence 98887765553 22222111 0111000 000
Q ss_pred -HHHh----hhcC--CceEEE-----ecCc--ccHHHHHHHHHHhCC-CEEEEEcCCccCHHHhhhC---CccEEecCCC
Q 003189 718 -EELS----KLIP--KIQVMA-----RSSP--MDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEA---DIGLAMGIAG 779 (840)
Q Consensus 718 -~~~~----~~~~--~~~v~a-----r~~P--~~K~~~V~~l~~~~g-~~v~~~GDG~ND~~al~~A---dvgiamg~~g 779 (840)
+++. ..+. .+.+.. ...| .+|...++.+.+..+ ..++++||+.||.+||+.+ ..+++|| ++
T Consensus 624 a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~ 702 (726)
T PRK14501 624 ANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVG-PG 702 (726)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEEC-CC
Confidence 0111 1111 111111 1223 689999999887532 6899999999999999986 5899999 43
Q ss_pred cHHHHhhcCEEeccCCchHHHHHHH
Q 003189 780 TEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 780 ~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
+.+|++.|.+ -..+..+++
T Consensus 703 ----~s~A~~~l~~--~~eV~~~L~ 721 (726)
T PRK14501 703 ----ESRARYRLPS--QREVRELLR 721 (726)
T ss_pred ----CCcceEeCCC--HHHHHHHHH
Confidence 5678888864 355555543
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0036 Score=66.78 Aligned_cols=122 Identities=16% Similarity=0.196 Sum_probs=80.8
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC-CccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
++-||+.+.++.|++.|+++.++|+.....+..+-+..|+.... ..++.+.+. ....| +.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~------------------~~~KP-~p 161 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDV------------------PAGRP-YP 161 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcC------------------CCCCC-Ch
Confidence 46799999999999999999999999999888888877765321 122222110 01123 22
Q ss_pred HHHHHHHHHhCC----CEEEEEcCCccCHHHhhhCCc---cEEecCCC------------------------cHHHHhhc
Q 003189 739 HTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADI---GLAMGIAG------------------------TEVAKESA 787 (840)
Q Consensus 739 ~~~V~~l~~~~g----~~v~~~GDG~ND~~al~~Adv---giamg~~g------------------------~~~ak~~a 787 (840)
.-+.+.+++. | +.+.|+||+.+|..+-+.|++ |+.-|... .+.....+
T Consensus 162 ~~~~~a~~~l-~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a 240 (267)
T PRK13478 162 WMALKNAIEL-GVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGA 240 (267)
T ss_pred HHHHHHHHHc-CCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCC
Confidence 3344444443 4 458999999999999999997 44444210 12334558
Q ss_pred CEEeccCCchHHHHHH
Q 003189 788 DVIILDDNFSTIVTVA 803 (840)
Q Consensus 788 Divlldd~f~~i~~~i 803 (840)
|+++ |++..+...+
T Consensus 241 ~~vi--~~~~~l~~~l 254 (267)
T PRK13478 241 HYVI--DTIADLPAVI 254 (267)
T ss_pred Ceeh--hhHHHHHHHH
Confidence 8888 4477777655
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0016 Score=66.11 Aligned_cols=94 Identities=18% Similarity=0.082 Sum_probs=64.9
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCccc
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (840)
.+++.+++.++++.|++.|+++.++||.....+..+.+.+|+......++.+.+ +...-.|+-
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~-----------------~~~KP~p~~ 166 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMED-----------------CPPKPNPEP 166 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecC-----------------CCCCcCHHH
Confidence 455677889999999999999999999999999999999998643222222221 111122322
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCccCHHHhhhC
Q 003189 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEA 769 (840)
Q Consensus 738 K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~A 769 (840)
-..+++.+.-. .+.+.|+||+.+|+.+-+.|
T Consensus 167 ~~~~~~~~~~~-~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 167 LILAAKALGVE-ACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHhCcC-cccEEEEeCCHHHHHHHHhC
Confidence 23333433323 36789999999999987764
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0053 Score=60.93 Aligned_cols=142 Identities=20% Similarity=0.281 Sum_probs=98.3
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC---------------------------ccccChhh
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG---------------------------IAIEGPEF 712 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~---------------------------~~~~g~~~ 712 (840)
.+-||+.++++.+++. ...+++|-...+-+.++|..+|+...+- ..++|+++
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 4579999999999865 6677888888999999999999964321 11222221
Q ss_pred h--------cCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCC--CEEEEEcCCccCHHHhhhCC-c-cEEecCCCc
Q 003189 713 R--------EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLG--EVVAVTGDGTNDAPALHEAD-I-GLAMGIAGT 780 (840)
Q Consensus 713 ~--------~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g--~~v~~~GDG~ND~~al~~Ad-v-giamg~~g~ 780 (840)
. .+.+.++.+++.++++... ..|.++++.+-+.-| ...+++||++.|..||+.+. - |+|+.-+|.
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGg---g~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGN 238 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGG---GEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGN 238 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccC---cchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCC
Confidence 1 1222333334444444433 567777777655422 34688999999999999885 2 366666899
Q ss_pred HHHHhhcCEEeccCCchHHHHHHHH
Q 003189 781 EVAKESADVIILDDNFSTIVTVAKW 805 (840)
Q Consensus 781 ~~ak~~aDivlldd~f~~i~~~i~~ 805 (840)
+-|...||+-+...+..+...+|..
T Consensus 239 eYal~eAdVAvisp~~~a~~pviel 263 (315)
T COG4030 239 EYALKEADVAVISPTAMAEAPVIEL 263 (315)
T ss_pred cccccccceEEeccchhhhhHHHHH
Confidence 9999999999998888888777654
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0023 Score=66.45 Aligned_cols=88 Identities=19% Similarity=0.243 Sum_probs=62.6
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCC----CHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcc
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGD----NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD----~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~ 736 (840)
+.+++++.++.+++.|+++.++|+. ...++..+.+.+|+......++.++... ...|
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~------------------~~Kp- 175 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPG------------------QYQY- 175 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCC------------------CCCC-
Confidence 3445999999999999999999998 7779999999999964322222222210 0112
Q ss_pred cHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc
Q 003189 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (840)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advg 772 (840)
+|. ..+++. | .+.|+||..||..+-++|++-
T Consensus 176 ~~~---~~l~~~-~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 176 TKT---QWIQDK-N-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CHH---HHHHhC-C-CeEEEeCCHHHHHHHHHCCCC
Confidence 233 344444 5 478999999999999999874
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0023 Score=67.36 Aligned_cols=46 Identities=30% Similarity=0.416 Sum_probs=38.0
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEV 782 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ 782 (840)
..|...|+.|++++| +.|.++||+.||.+||..++-||.+| ++.+.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e 212 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPE 212 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHH
Confidence 789999999998865 46777899999999999999999999 66665
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0069 Score=69.94 Aligned_cols=123 Identities=14% Similarity=0.111 Sum_probs=83.0
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.||+.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.+++.. ....|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~-----------------~~~kP~--- 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQIN-----------------SLNKSD--- 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCC-----------------CCCCcH---
Confidence 678999999999999999999999999999999999999865323333332210 111232
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc-EEecC-CCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGI-AGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 740 ~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advg-iamg~-~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
-+...+++.--+.+.|+||+.+|..+-+.|++- |...- .+.+.....+|+++. ++..+.+.+.
T Consensus 390 ~~~~al~~l~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l~ 454 (459)
T PRK06698 390 LVKSILNKYDIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGILS 454 (459)
T ss_pred HHHHHHHhcCcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHHH
Confidence 222223222135799999999999999999974 33320 222222345899874 4877776654
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0067 Score=62.56 Aligned_cols=111 Identities=16% Similarity=0.213 Sum_probs=72.7
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.||+.+.++.|+++|+++.++|+.....+...-+..|+... ..++.+++. .+..|.- .
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~-~~i~~~~~~------------------~~~KP~p-~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP-EVFVTAERV------------------KRGKPEP-D 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc-cEEEEHHHh------------------cCCCCCc-H
Confidence 5789999999999999999999999887777776677777321 222222211 1122321 2
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc-EEecCCCc-HHHHhhcCEEec
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG-LAMGIAGT-EVAKESADVIIL 792 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg-iamg~~g~-~~ak~~aDivll 792 (840)
-+...+++. | +.+.|+||..+|+.+-+.|++- |++. .+. ......+|+++.
T Consensus 143 ~~~~~~~~~-g~~p~~~l~igDs~~di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 143 AYLLGAQLL-GLAPQECVVVEDAPAGVLSGLAAGCHVIAVN-APADTPRLDEVDLVLH 198 (218)
T ss_pred HHHHHHHHc-CCCcccEEEEecchhhhHHHHHCCCEEEEEC-CCCchhhhccCCEEec
Confidence 223333332 4 6799999999999999999984 5554 332 223345788764
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.012 Score=55.33 Aligned_cols=90 Identities=20% Similarity=0.219 Sum_probs=64.1
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCC--------HHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEE
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDN--------INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVM 730 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~--------~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ 730 (840)
-++.|++.++++.|+++|+++.++|+.. .....++.+.+|+.... . ++
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~-~-----------------------~~ 79 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV-L-----------------------YA 79 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE-E-----------------------EE
Confidence 4678999999999999999999999998 77788888988885210 0 11
Q ss_pred EecCcccHHHHHHHHHHhC----CCEEEEEcC-CccCHHHhhhCCcc
Q 003189 731 ARSSPMDKHTLVKHLRTTL----GEVVAVTGD-GTNDAPALHEADIG 772 (840)
Q Consensus 731 ar~~P~~K~~~V~~l~~~~----g~~v~~~GD-G~ND~~al~~Advg 772 (840)
+...+.-|..+++.+.+++ .+.++|+|| ..+|..+.+.+++-
T Consensus 80 ~~~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 80 CPHCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred CCCCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 1001122334444444443 267999999 59999999998763
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0098 Score=57.87 Aligned_cols=103 Identities=17% Similarity=0.242 Sum_probs=68.7
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHH---HHHHHc---C--CccCCCccc-cChhhhcCCHHHHhhhcCCce
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAK---AIAREC---G--ILTDNGIAI-EGPEFREKSDEELSKLIPKIQ 728 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~---~iA~~~---G--i~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~ 728 (840)
+|.+.|+++++++.++++|+++.++||.....+. ....++ | +.. ..++. +|..+..... .
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~-g~li~~~g~~~~~~~~----------e 93 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH-GPVLLSPDRLFAALHR----------E 93 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC-ceEEEcCCcchhhhhc----------c
Confidence 5788999999999999999999999999988874 555552 3 321 11221 2222211100 0
Q ss_pred EEEecCccc-HHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCcc
Q 003189 729 VMARSSPMD-KHTLVKHLRTTL----GEVVAVTGDGTNDAPALHEADIG 772 (840)
Q Consensus 729 v~ar~~P~~-K~~~V~~l~~~~----g~~v~~~GDG~ND~~al~~Advg 772 (840)
+. ...|+. |...++.+++.+ ...++.+|++.+|+.+-++++|-
T Consensus 94 ~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 94 VI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred cc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 11 123433 888888887742 36788899999999999987653
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0054 Score=63.65 Aligned_cols=85 Identities=21% Similarity=0.306 Sum_probs=63.1
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCC----HHHHHHHHHHcCCc--cCCCccccChhhhcCCHHHHhhhcCCceEEEec
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDN----INTAKAIARECGIL--TDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~----~~ta~~iA~~~Gi~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (840)
.+.|++++.++.+++.|+++.++|+.. ..++..+.+..||. ..... +++..
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~v-----------------------il~gd 170 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPV-----------------------IFAGD 170 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeE-----------------------EEcCC
Confidence 367789999999999999999999964 66999999999994 21111 23322
Q ss_pred Cc--ccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc
Q 003189 734 SP--MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (840)
Q Consensus 734 ~P--~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advg 772 (840)
++ .+|.. .+++. | .++|+||..+|..+-++|++-
T Consensus 171 ~~~K~~K~~---~l~~~-~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 171 KPGQYTKTQ---WLKKK-N-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred CCCCCCHHH---HHHhc-C-CeEEEcCCHHHHHHHHHcCCc
Confidence 22 34544 44444 4 488999999999999999874
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.01 Score=65.77 Aligned_cols=119 Identities=18% Similarity=0.226 Sum_probs=80.1
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH-
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK- 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K- 738 (840)
++.||+.+.++.|+++|+++.++|+.+...+..+-+..||......++.+.+.. +..|...
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~------------------~~KP~Pei 277 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVY------------------RGKPDPEM 277 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCC------------------CCCCCHHH
Confidence 467999999999999999999999999999999999999865333333333211 1123211
Q ss_pred -HHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE-EecCCCcHHH-HhhcCEEeccCCchHHH
Q 003189 739 -HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL-AMGIAGTEVA-KESADVIILDDNFSTIV 800 (840)
Q Consensus 739 -~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgi-amg~~g~~~a-k~~aDivlldd~f~~i~ 800 (840)
...++.+.-. .+.++|+||..+|+.|-+.|++-. ++. .+.+.. ...+|+++ +++..+.
T Consensus 278 fl~A~~~lgl~-Peecl~IGDS~~DIeAAk~AGm~~IgV~-~~~~~~~l~~Ad~iI--~s~~EL~ 338 (381)
T PLN02575 278 FIYAAQLLNFI-PERCIVFGNSNQTVEAAHDARMKCVAVA-SKHPIYELGAADLVV--RRLDELS 338 (381)
T ss_pred HHHHHHHcCCC-cccEEEEcCCHHHHHHHHHcCCEEEEEC-CCCChhHhcCCCEEE--CCHHHHH
Confidence 1222222222 367999999999999999999853 223 332222 23588887 4477663
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.011 Score=58.54 Aligned_cols=120 Identities=18% Similarity=0.122 Sum_probs=67.2
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHH--------HHHHHHHHcCCccCCCccc-cChhhhcCCHHHHhhhcCCceEEE
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNIN--------TAKAIARECGILTDNGIAI-EGPEFREKSDEELSKLIPKIQVMA 731 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~--------ta~~iA~~~Gi~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~v~a 731 (840)
+-|++++.+++|++.|+++.++|+.... ......+..|+..--.... .+++ ..
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~------------------~~ 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDG------------------CE 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCC------------------CC
Confidence 6899999999999999999999987631 2233344555532000000 0000 00
Q ss_pred ecCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCC--cH--------HHHhhcCEEeccCCchH
Q 003189 732 RSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAG--TE--------VAKESADVIILDDNFST 798 (840)
Q Consensus 732 r~~P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g--~~--------~ak~~aDivlldd~f~~ 798 (840)
...|.- ..+-+.+++. | +.+.|+||..+|..+-+.|++-...-..| .+ ..+..+|.++ +++..
T Consensus 91 ~~KP~p-~~~~~~~~~l-~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~--~~~~e 166 (173)
T PRK06769 91 CRKPST-GMLLQAAEKH-GLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIA--ENFED 166 (173)
T ss_pred CCCCCH-HHHHHHHHHc-CCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchh--hCHHH
Confidence 112211 1122223322 3 56999999999999999999854332132 21 1123467776 33666
Q ss_pred HHHH
Q 003189 799 IVTV 802 (840)
Q Consensus 799 i~~~ 802 (840)
+...
T Consensus 167 l~~~ 170 (173)
T PRK06769 167 AVNW 170 (173)
T ss_pred HHHH
Confidence 6543
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.0094 Score=57.44 Aligned_cols=105 Identities=19% Similarity=0.154 Sum_probs=73.0
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcC----CccCCCccccChhhhcCCHHHHhhhcCCceEEEecCc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECG----ILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~G----i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (840)
.++|+-++.++.+++.+++++++|+--..-...+-...+ |..- .++-+...+. ..-+...++-..+|
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~i-di~sn~~~ih--------~dg~h~i~~~~ds~ 143 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCI-DIVSNNDYIH--------IDGQHSIKYTDDSQ 143 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeee-EEeecCceEc--------CCCceeeecCCccc
Confidence 479999999999999999999999988877887777766 3210 0000000000 00000001111222
Q ss_pred --ccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEE
Q 003189 736 --MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (840)
Q Consensus 736 --~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgia 774 (840)
.+|...|+.|++. .+.+.|+|||+.|..|-+.+|+=+|
T Consensus 144 fG~dK~~vI~~l~e~-~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 144 FGHDKSSVIHELSEP-NESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred cCCCcchhHHHhhcC-CceEEEecCCcccccHhhhhhhHhh
Confidence 6899999999988 8889999999999999999988775
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.0088 Score=60.58 Aligned_cols=94 Identities=12% Similarity=0.189 Sum_probs=66.0
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+++++|++.|+++.++|+-+......+.+.+|+......++..++. ....|.. .
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~------------------~~~KP~~-~ 152 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAV------------------RAYKPAP-Q 152 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhc------------------CCCCCCH-H
Confidence 46899999999999999999999999999999999999985422222222111 1123321 2
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccE
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgi 773 (840)
-+...+++. | +.+.++||+.+|..+-+.|++-.
T Consensus 153 ~~~~~~~~~-~~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 153 VYQLALEAL-GVPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred HHHHHHHHh-CCChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 222233332 4 56899999999999999998753
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.0094 Score=59.46 Aligned_cols=91 Identities=13% Similarity=0.234 Sum_probs=61.0
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.++++.|+++|+++.++|+.. .+..+.+.+|+...-..++.+.+. .+..|. ..
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~~f~~~~~~~~~------------------~~~kp~-p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLIDYFDAIVDPAEI------------------KKGKPD-PE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHhhCcEEEehhhc------------------CCCCCC-hH
Confidence 578999999999999999999999753 245677888886432223222221 112232 22
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg 772 (840)
.+-+.+++. | +.+.|+||..+|+.+-+.|++-
T Consensus 146 ~~~~~~~~~-~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 146 IFLAAAEGL-GVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHc-CCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 222333332 4 5689999999999999999874
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.016 Score=60.13 Aligned_cols=94 Identities=12% Similarity=0.109 Sum_probs=66.5
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.||+.+.++.|++.|+++.++|.-+...+...-+..|+......++.+.++ ....| +-
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~------------------~~~KP--~p 152 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTF------------------GYPKE--DQ 152 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeC------------------CCCCC--CH
Confidence 57899999999999999999999999988888888888885422222211111 11123 23
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccE
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgi 773 (840)
.+.....+++| +.+.|+||..+|+.+-+.|++..
T Consensus 153 ~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 153 RLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred HHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeE
Confidence 34444333334 56899999999999999999963
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.05 Score=60.26 Aligned_cols=64 Identities=22% Similarity=0.271 Sum_probs=48.3
Q ss_pred ccHHHHHHHHHHhCC-----C-EEEEEcCCccCHHHhhh-----CCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG-----E-VVAVTGDGTNDAPALHE-----ADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g-----~-~v~~~GDG~ND~~al~~-----Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
.+|...|+.|.+.+| . .++++||+.||.+||+. +++||+|| ++.+. -.|++.|-+ ...+...++
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~~--t~A~y~L~d--p~eV~~~L~ 374 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPKE--SNAFYSLRD--PSEVMEFLK 374 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCCC--ccceEEcCC--HHHHHHHHH
Confidence 499999999988765 1 25899999999999996 68999999 55432 357887744 666665543
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.028 Score=56.11 Aligned_cols=125 Identities=18% Similarity=0.131 Sum_probs=67.9
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~---------------~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~ 724 (840)
.+.||+.+++++|++.|+++.++|..+. .....+-+..|+.-. .++......
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~--~i~~~~~~~----------- 95 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD--GIYYCPHHP----------- 95 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc--eEEECCCCC-----------
Confidence 3679999999999999999999998762 112223344554211 000000000
Q ss_pred CCceEEEecCcccHHHHHHHHHHh--CCCEEEEEcCCccCHHHhhhCCccE-EecCCCcH---HHHhhc--CEEeccCCc
Q 003189 725 PKIQVMARSSPMDKHTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIGL-AMGIAGTE---VAKESA--DVIILDDNF 796 (840)
Q Consensus 725 ~~~~v~ar~~P~~K~~~V~~l~~~--~g~~v~~~GDG~ND~~al~~Advgi-amg~~g~~---~ak~~a--Divlldd~f 796 (840)
. .......|. ..-+.+.+++. ..+.+.|+||..+|..+-+.|++.. .+. .|.. .....+ |+++ +++
T Consensus 96 ~--~~~~~~KP~-p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ii--~~l 169 (181)
T PRK08942 96 E--DGCDCRKPK-PGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVR-TGKGVTTLAEGAAPGTWVL--DSL 169 (181)
T ss_pred C--CCCcCCCCC-HHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEc-CCCCchhhhcccCCCceee--cCH
Confidence 0 000111221 12222233322 0367999999999999999999742 222 2221 122335 8877 347
Q ss_pred hHHHHHH
Q 003189 797 STIVTVA 803 (840)
Q Consensus 797 ~~i~~~i 803 (840)
..+.+.+
T Consensus 170 ~el~~~l 176 (181)
T PRK08942 170 ADLPQAL 176 (181)
T ss_pred HHHHHHH
Confidence 7776654
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.011 Score=64.15 Aligned_cols=109 Identities=14% Similarity=0.029 Sum_probs=73.5
Q ss_pred ccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcc
Q 003189 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (840)
Q Consensus 657 ~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~ 736 (840)
..+++.|++.++++.|++.|+++.++||.....+..+.+.+|+....--.+.|.+. ...+ +... --.+-.|+
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~----~~~~---~~~~-~~~kp~p~ 255 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPP----DMHF---QREQ-GDKRPDDV 255 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcc----hhhh---cccC-CCCCCcHH
Confidence 57899999999999999999999999999999999999999986311111111110 0000 0000 00123345
Q ss_pred cHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 003189 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (840)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgi 773 (840)
-+...++.+....-+.+.|+||..+|+.+-+.|++-.
T Consensus 256 ~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 256 VKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred HHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 5566655543211267999999999999999999864
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.017 Score=57.67 Aligned_cols=92 Identities=17% Similarity=0.221 Sum_probs=62.1
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
-++.||+.+.++.|++.|+++.++|+. ..+..+-+.+|+...-..++.+.+ ..+..|..
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~------------------~~~~kp~~- 145 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADE------------------VKEGKPHP- 145 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhh------------------CCCCCCCh-
Confidence 368999999999999999999999987 567778888888542212221111 01123322
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc
Q 003189 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (840)
Q Consensus 739 ~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg 772 (840)
.+++...+++| +.+.|+||+.+|..+-+.|++.
T Consensus 146 -~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 146 -ETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred -HHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 22233222223 5688999999999999999875
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.012 Score=60.68 Aligned_cols=97 Identities=16% Similarity=0.219 Sum_probs=67.3
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++.|+++.++|+-+...+....+.+|+......++.+.+. .+..|.. .
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~------------------~~~KP~~-~ 154 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEE------------------GVEKPHP-K 154 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccC------------------CCCCCCH-H
Confidence 57899999999999999999999999988888888999986432222222111 1123322 1
Q ss_pred HHHHHHHHhCC---CEEEEEcCCc-cCHHHhhhCCcc-EEec
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIG-LAMG 776 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~-ND~~al~~Advg-iamg 776 (840)
.+...+++. | +.+.|+||.. +|..+-+.|++- |...
T Consensus 155 ~~~~~~~~~-~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 155 IFYAALKRL-GVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHc-CCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 233333333 4 5789999998 999999999974 4443
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.027 Score=58.17 Aligned_cols=121 Identities=14% Similarity=0.168 Sum_probs=76.3
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|+ +|+++.++|......+...-+.+|+...-..++.+.+. ....|. .
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~------------------~~~KP~--p 153 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQV------------------GVAKPD--V 153 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECcc------------------CCCCCC--H
Confidence 46899999999999 68999999999888888888888885422222211110 011232 2
Q ss_pred HHHHHHHHhCC----CEEEEEcCCc-cCHHHhhhCCcc-EEecCCCcH-HHHhhcCEEeccCCchHHHHHH
Q 003189 740 TLVKHLRTTLG----EVVAVTGDGT-NDAPALHEADIG-LAMGIAGTE-VAKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 740 ~~V~~l~~~~g----~~v~~~GDG~-ND~~al~~Advg-iamg~~g~~-~ak~~aDivlldd~f~~i~~~i 803 (840)
.+.....+++| +.+.|+||.. +|+.+-+.|++- +...-.+.+ .....+|+++ +++..+..++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 154 AIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred HHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 33333323324 4699999998 799999999985 333211211 1112478877 3477776654
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.017 Score=57.44 Aligned_cols=92 Identities=18% Similarity=0.232 Sum_probs=61.4
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+...-..++.+.+. ....|. .
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~------------------~~~KP~--~ 143 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDV------------------GRGKPD--P 143 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCC------------------CCCCCC--H
Confidence 678999999999999999999999988877 6565568885422222222110 011221 2
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg 772 (840)
...+.+.+++| +.+.|+||...|..+-+++++-
T Consensus 144 ~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 144 DIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 22222222223 6789999999999999988873
|
HAD subfamilies caused by an overly broad single model. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.065 Score=51.29 Aligned_cols=109 Identities=17% Similarity=0.282 Sum_probs=78.4
Q ss_pred HHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH
Q 003189 616 IEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR 695 (840)
Q Consensus 616 ~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~ 695 (840)
.+.+..+|++++.+- + |-|+++.= ....-|++++=+.+++.+|+++.++|--+...+..++.
T Consensus 20 ~~~L~~~Gikgvi~D---l-------------DNTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~ 81 (175)
T COG2179 20 PDILKAHGIKGVILD---L-------------DNTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAE 81 (175)
T ss_pred HHHHHHcCCcEEEEe---c-------------cCceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhh
Confidence 356778899998763 2 22333221 33467888999999999999999999999999999999
Q ss_pred HcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCC---CEEEEEcCCc-cCHHHhhhCCc
Q 003189 696 ECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADI 771 (840)
Q Consensus 696 ~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g---~~v~~~GDG~-ND~~al~~Adv 771 (840)
.+|+.- ++--..|.-+ .+-+++++. + +.|+|+||.. .|+-+=..|++
T Consensus 82 ~l~v~f---------------------------i~~A~KP~~~-~fr~Al~~m-~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 82 KLGVPF---------------------------IYRAKKPFGR-AFRRALKEM-NLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred hcCCce---------------------------eecccCccHH-HHHHHHHHc-CCChhHEEEEcchhhhhhhcccccCc
Confidence 999963 3333455543 456677765 4 7899999985 46665555544
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.056 Score=53.39 Aligned_cols=114 Identities=11% Similarity=0.068 Sum_probs=73.3
Q ss_pred eeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCC-CHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCc
Q 003189 649 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGD-NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKI 727 (840)
Q Consensus 649 ~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD-~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 727 (840)
.......+-+-++.||+.+.++.|+++|+++.++|+- ....+..+...+|+...... ..+...+..+
T Consensus 34 ~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~------------~~~~~~Fd~i 101 (174)
T TIGR01685 34 SIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKT------------VPMHSLFDDR 101 (174)
T ss_pred CeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCc------------ccHHHhceee
Confidence 3345555666688999999999999999999999976 88999999999998511100 0000001110
Q ss_pred eEEEecCcccH--HHHHHHHHHhC-----CCEEEEEcCCccCHHHhhhCCccEEe
Q 003189 728 QVMARSSPMDK--HTLVKHLRTTL-----GEVVAVTGDGTNDAPALHEADIGLAM 775 (840)
Q Consensus 728 ~v~ar~~P~~K--~~~V~~l~~~~-----g~~v~~~GDG~ND~~al~~Advgiam 775 (840)
+.+...+..| ..+.+.+.+.+ -+.++|+||...|+.+-++|++-.+.
T Consensus 102 -v~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 102 -IEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred -eeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 2222111112 23344444321 26799999999999999999986543
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.017 Score=59.58 Aligned_cols=120 Identities=14% Similarity=0.117 Sum_probs=76.1
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.+++|++. +++.++|+-....+..+.+.+|+...-+.++...+. ....|. .
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~------------------~~~KP~--~ 155 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDA------------------GIQKPD--K 155 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCcc------------------CCCCCC--H
Confidence 5789999999999999 999999999999999999999986432222211110 011232 2
Q ss_pred HHHHHHHHhC-C---CEEEEEcCCc-cCHHHhhhCCccE-EecC-CCcHHHHhhcCEEeccCCchHHHHH
Q 003189 740 TLVKHLRTTL-G---EVVAVTGDGT-NDAPALHEADIGL-AMGI-AGTEVAKESADVIILDDNFSTIVTV 802 (840)
Q Consensus 740 ~~V~~l~~~~-g---~~v~~~GDG~-ND~~al~~Advgi-amg~-~g~~~ak~~aDivlldd~f~~i~~~ 802 (840)
.+.+...+++ | +.+.|+||+. +|..+-+.+++-. ...- ...+.....+|+++ +++..+..+
T Consensus 156 ~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~~ 223 (224)
T TIGR02254 156 EIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYEI 223 (224)
T ss_pred HHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHhh
Confidence 2333322233 2 5689999998 8999999999733 2220 11212223567776 346666543
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.013 Score=57.41 Aligned_cols=95 Identities=21% Similarity=0.271 Sum_probs=67.0
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCccc
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (840)
..++.|++.+.++.|++.|+++.++|+-.........+.+|+......++...+... ..|
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~------------------~Kp-- 134 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGS------------------RKP-- 134 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSS------------------STT--
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhh------------------hhh--
Confidence 346789999999999999999999999999999999999998742222222221110 112
Q ss_pred HHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCcc
Q 003189 738 KHTLVKHLRTTL---GEVVAVTGDGTNDAPALHEADIG 772 (840)
Q Consensus 738 K~~~V~~l~~~~---g~~v~~~GDG~ND~~al~~Advg 772 (840)
+..+.+.+.+.+ .+.+.++||+..|..+-+.|++-
T Consensus 135 ~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 135 DPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp SHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 122333332222 36799999999999999999874
|
... |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.064 Score=53.27 Aligned_cols=126 Identities=20% Similarity=0.167 Sum_probs=66.2
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHH---------------HHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcC
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNIN---------------TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP 725 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~---------------ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~ 725 (840)
+.|++.++++.|+++|+++.++|.-+.. ....+..+.|+.-. ........... ..++.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~i~~~~~~~~~--~~~~~---- 99 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLD-GIYYCPHHPEG--VEEFR---- 99 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCcc-EEEECCCCCcc--ccccc----
Confidence 5799999999999999999999987631 11223333333211 00000000000 00000
Q ss_pred CceEEEecCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccE--EecCCCcH---HHHhhcCEEeccCCch
Q 003189 726 KIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL--AMGIAGTE---VAKESADVIILDDNFS 797 (840)
Q Consensus 726 ~~~v~ar~~P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgi--amg~~g~~---~ak~~aDivlldd~f~ 797 (840)
.-.....|. ..++....+++| +.+.|+||..+|..+-+.|++.. ... .|.. .....+|+++. ++.
T Consensus 100 --~~~~~~KP~--p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~-~g~~~~~~~~~~ad~~i~--~~~ 172 (176)
T TIGR00213 100 --QVCDCRKPK--PGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVR-TGKPITPEAENIADWVLN--SLA 172 (176)
T ss_pred --CCCCCCCCC--HHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEe-cCCcccccccccCCEEec--cHH
Confidence 000011232 333333322324 66889999999999999999853 322 3322 22235899883 465
Q ss_pred HHH
Q 003189 798 TIV 800 (840)
Q Consensus 798 ~i~ 800 (840)
.+.
T Consensus 173 el~ 175 (176)
T TIGR00213 173 DLP 175 (176)
T ss_pred Hhh
Confidence 543
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.077 Score=52.88 Aligned_cols=37 Identities=11% Similarity=0.177 Sum_probs=33.9
Q ss_pred chHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 003189 664 GVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (840)
Q Consensus 664 ~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~ 700 (840)
.+.+.+.+|+++|+.|+.+|......-...-+.+|..
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999999999999999999986
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.032 Score=62.63 Aligned_cols=118 Identities=15% Similarity=0.172 Sum_probs=75.7
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH-HcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR-ECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~-~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
++.||+.+.++.|++.|+++.++|+.....+....+ ..|+...-+.++.+++. .+..|. .
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v------------------~~~KP~-p 153 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEV------------------EKGKPS-P 153 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhc------------------CCCCCC-H
Confidence 467999999999999999999999999888877665 67875432333333221 112231 1
Q ss_pred HHHHHHHHHh--CCCEEEEEcCCccCHHHhhhCCcc-EEecCCC--cHHHHhhcCEEeccCCchHH
Q 003189 739 HTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIG-LAMGIAG--TEVAKESADVIILDDNFSTI 799 (840)
Q Consensus 739 ~~~V~~l~~~--~g~~v~~~GDG~ND~~al~~Advg-iamg~~g--~~~ak~~aDivlldd~f~~i 799 (840)
.-+.+.+++. ..+.+.|+||+.+|+.+-+.|++. |.+. .+ .+.....+|.++.+ +..+
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~-~g~~~~~~~~~ad~~i~s--l~el 216 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVP-SIPKQTHLYSSADEVINS--LLDL 216 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEEC-CCCcchhhccCccEEeCC--HhHc
Confidence 2233333333 036799999999999999999986 3333 22 23233457777633 5543
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.051 Score=52.22 Aligned_cols=90 Identities=26% Similarity=0.358 Sum_probs=61.4
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~---------------~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~ 724 (840)
++.|++.++++.|++.|+++.++|..+. ..+..+.+.+|+.... .
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~------------------- 86 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG-V------------------- 86 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE-E-------------------
Confidence 4789999999999999999999998762 4556667778875210 0
Q ss_pred CCceEEEec-------CcccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccE
Q 003189 725 PKIQVMARS-------SPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (840)
Q Consensus 725 ~~~~v~ar~-------~P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgi 773 (840)
+++.. ...-|..+++...+++| +.+.|+||...|..+-+.+++-.
T Consensus 87 ----~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 87 ----LFCPHHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred ----EECCCCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 11100 01223444444434335 56999999999999999998753
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.049 Score=53.79 Aligned_cols=85 Identities=21% Similarity=0.294 Sum_probs=62.0
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCC-HHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCccc
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDN-INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~-~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (840)
..+-|++.++++.|++.|+++.++|+.+ ...+..+.+.+|+.. ......|.
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~---------------------------~~~~~KP~- 93 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV---------------------------LPHAVKPP- 93 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE---------------------------EcCCCCCC-
Confidence 3578999999999999999999999988 677888888888742 11112342
Q ss_pred HHHHHHHHHHhCC---CEEEEEcCCc-cCHHHhhhCCcc
Q 003189 738 KHTLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIG 772 (840)
Q Consensus 738 K~~~V~~l~~~~g---~~v~~~GDG~-ND~~al~~Advg 772 (840)
..+.....+++| +.++|+||.. .|..+-+.|++-
T Consensus 94 -p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 94 -GCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred -hHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 223333222224 5699999998 799999999974
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.035 Score=59.78 Aligned_cols=119 Identities=20% Similarity=0.257 Sum_probs=72.6
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC-CC-ccccChhhhcCCHHHHhhhcCCceEEEecCccc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD-NG-IAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~-~~-~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (840)
++.||+.+.++.|++.|+++.++|+-+......+-+..++... +. .++.+.+ +....|.
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~------------------~~~~KP~- 204 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDD------------------VPKKKPD- 204 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccc------------------cCCCCCC-
Confidence 5789999999999999999999999988888777665532210 00 0111111 0111222
Q ss_pred HHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCc--HHHHhhcCEEeccCCchHHH
Q 003189 738 KHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGT--EVAKESADVIILDDNFSTIV 800 (840)
Q Consensus 738 K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~--~~ak~~aDivlldd~f~~i~ 800 (840)
..+.....+++| +.++|+||+.+|..+-+.|++....-..|. ......+|+++ +++..+.
T Consensus 205 -p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi--~~~~~l~ 269 (286)
T PLN02779 205 -PDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVF--DCLGDVP 269 (286)
T ss_pred -HHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEE--CChhhcc
Confidence 222222222224 569999999999999999998654422322 11123588887 3465554
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.11 Score=54.78 Aligned_cols=87 Identities=13% Similarity=0.188 Sum_probs=62.1
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHH---HHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecC
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNIN---TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 734 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~---ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~ 734 (840)
..++-|++.+.++.+++.|+++.++|+.... .....-+..|+.... .-.++.|-.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~----------------------~d~lllr~~ 173 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQAD----------------------EEHLLLKKD 173 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCC----------------------cceEEeCCC
Confidence 4567899999999999999999999998743 334555778885310 001444433
Q ss_pred cccHHHHHHHHHHhCCCEEEEEcCCccCHHHhh
Q 003189 735 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALH 767 (840)
Q Consensus 735 P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~ 767 (840)
...|....+.+.+. -.+++++||..+|.....
T Consensus 174 ~~~K~~rr~~I~~~-y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 174 KSSKESRRQKVQKD-YEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred CCCcHHHHHHHHhc-CCEEEEECCCHHHhhhhh
Confidence 44677777777655 477999999999986543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.032 Score=53.70 Aligned_cols=94 Identities=17% Similarity=-0.014 Sum_probs=65.5
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC-CccccChhhhcCCHHHHhhhcCCceEEEecCcc
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~ 736 (840)
.-++||++.+.++.|+ .++++.++|.-+...+..+-+.+|+...- ..++.+++.. +..|.
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~------------------~~KP~ 103 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECV------------------FVKGK 103 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECcccc------------------ccCCe
Confidence 3357999999999999 57999999999999999999999884311 1222222211 11232
Q ss_pred cHHHHHHHHHHh--CCCEEEEEcCCccCHHHhhhCCccEE
Q 003189 737 DKHTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIGLA 774 (840)
Q Consensus 737 ~K~~~V~~l~~~--~g~~v~~~GDG~ND~~al~~Advgia 774 (840)
+.+.++.. ..+.+.|+||..+|..+-++|.|-|.
T Consensus 104 ----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 104 ----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred ----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 44445433 13679999999999999887766553
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.19 Score=52.64 Aligned_cols=94 Identities=16% Similarity=0.180 Sum_probs=61.0
Q ss_pred eeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHH--HHHHHcCCcc-CCCccccChhhhcCCHHHHhhhcCCceE
Q 003189 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAK--AIARECGILT-DNGIAIEGPEFREKSDEELSKLIPKIQV 729 (840)
Q Consensus 653 g~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~--~iA~~~Gi~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~v 729 (840)
|.+.-...+-|++.+++++|+++|+++.++|.-...... ...+++|+.. ....+++..+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~----------------- 79 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEI----------------- 79 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHH-----------------
Confidence 445556778999999999999999999999996655444 5668889864 22222221110
Q ss_pred EEecCcccHHHHHHHHHHh--CCCEEEEEcCCccCHHHhhhCC
Q 003189 730 MARSSPMDKHTLVKHLRTT--LGEVVAVTGDGTNDAPALHEAD 770 (840)
Q Consensus 730 ~ar~~P~~K~~~V~~l~~~--~g~~v~~~GDG~ND~~al~~Ad 770 (840)
....+.+.+++. .+..+.++||+.+|...+..++
T Consensus 80 -------~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 80 -------AVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred -------HHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 011222222221 1467999999999998886543
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.049 Score=52.53 Aligned_cols=89 Identities=18% Similarity=0.273 Sum_probs=58.5
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
+..|++.+.++.|++.|+++.++|+-....+....+.. +......++...+ + . ..| +.
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~-----------------~-~-~Kp--~~ 121 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDE-----------------F-G-AKP--EP 121 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCC-----------------C-C-CCc--CH
Confidence 34589999999999999999999999999888887775 3321111111000 0 0 122 23
Q ss_pred HHHHHHHHhCCC--EEEEEcCCccCHHHhhhCC
Q 003189 740 TLVKHLRTTLGE--VVAVTGDGTNDAPALHEAD 770 (840)
Q Consensus 740 ~~V~~l~~~~g~--~v~~~GDG~ND~~al~~Ad 770 (840)
.....+.+++|- .++|+||..+|..+-+.|+
T Consensus 122 ~~~~~~~~~~~~~~~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 122 EIFLAALESLGLPPEVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHHcCCCCCEEEEeCCHHHHHHHHHcc
Confidence 444443333342 6899999999999988764
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.24 Score=61.07 Aligned_cols=70 Identities=13% Similarity=0.154 Sum_probs=47.7
Q ss_pred HHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcchHHHHHHH-HhCCCEEEEEcCCCHHHH
Q 003189 612 LNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAIC-RSAGITVRMVTGDNINTA 690 (840)
Q Consensus 612 ~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l-~~aGi~v~m~TGD~~~ta 690 (840)
+++....|.....|.+++-| |.|++-.....-.+-|+..+++++| ++.|+.|.++||+...+.
T Consensus 584 ~~~i~~~y~~~~~rlI~LDy----------------DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L 647 (854)
T PLN02205 584 MEHIVSAYKRTTTRAILLDY----------------DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTL 647 (854)
T ss_pred HHHHHHHHHhhcCeEEEEec----------------CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHH
Confidence 34455666666666666532 3344322222335567899999996 778999999999999999
Q ss_pred HHHHHHc
Q 003189 691 KAIAREC 697 (840)
Q Consensus 691 ~~iA~~~ 697 (840)
......+
T Consensus 648 ~~~f~~~ 654 (854)
T PLN02205 648 ADWFSPC 654 (854)
T ss_pred HHHhCCC
Confidence 9887543
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.17 Score=52.01 Aligned_cols=88 Identities=17% Similarity=0.138 Sum_probs=57.4
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHH---HHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecC
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINT---AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 734 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~t---a~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~ 734 (840)
+-|.-|++.++++.+++.|++|+++||+.... ...--++.|+..-..+++-+.+-. ....
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~~~d~-----------------~~~~ 180 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRGLEDS-----------------NKTV 180 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecCCCCC-----------------CchH
Confidence 45888999999999999999999999999755 333335567753221222110000 0000
Q ss_pred cccHHHHHHHHHHhCC-CEEEEEcCCccCH
Q 003189 735 PMDKHTLVKHLRTTLG-EVVAVTGDGTNDA 763 (840)
Q Consensus 735 P~~K~~~V~~l~~~~g-~~v~~~GDG~ND~ 763 (840)
..-|...-+.+.+. | .+++.+||..+|.
T Consensus 181 ~~yKs~~R~~l~~~-GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 181 VTYKSEVRKSLMEE-GYRIWGNIGDQWSDL 209 (229)
T ss_pred hHHHHHHHHHHHhC-CceEEEEECCChHHh
Confidence 01166666677766 6 6889999999996
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.072 Score=54.05 Aligned_cols=92 Identities=16% Similarity=0.230 Sum_probs=59.6
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++-|++.++++.|++.|+++.++|+-... .....+.+|+...-..++...+. ....|. ..
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~------------------~~~KP~-~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEV------------------GAEKPD-PK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeeccc------------------CCCCCC-HH
Confidence 57799999999999999999999986553 46677788875321111111110 011232 12
Q ss_pred HHHHHHHHhCC---CEEEEEcCCc-cCHHHhhhCCcc
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIG 772 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~-ND~~al~~Advg 772 (840)
-+.+.+++. | +.+.|+||+. +|+.+-+.|++-
T Consensus 165 ~~~~~~~~~-~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 165 IFQEALERA-GISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHc-CCChhHEEEECCCchHHHHHHHHcCCe
Confidence 223333333 4 6799999997 899999988753
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.13 Score=56.70 Aligned_cols=99 Identities=23% Similarity=0.206 Sum_probs=61.7
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCC---------------CHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhh
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGD---------------NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKL 723 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD---------------~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~ 723 (840)
-++.|++.++++.|+++|+++.++|.- ....+..+.+..|+.- +...+.. ... .+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f-d~i~i~~-~~~--sd------ 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF-DEVLICP-HFP--ED------ 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce-eeEEEeC-CcC--cc------
Confidence 467899999999999999999999983 2334556667777641 1111100 000 00
Q ss_pred cCCceEEEecCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEE
Q 003189 724 IPKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA 774 (840)
Q Consensus 724 ~~~~~v~ar~~P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgia 774 (840)
. .. ...-|-.++..+.+.++ +.+.|+||+.+|..+-+.|++-..
T Consensus 99 --~--~~---~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 99 --N--CS---CRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred --c--CC---CCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 0 00 11223344544434422 679999999999999999998643
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.066 Score=56.24 Aligned_cols=71 Identities=18% Similarity=0.165 Sum_probs=53.7
Q ss_pred EEEecCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhC--------CccEEecCCCcHHHHhhcCEEeccCCch
Q 003189 729 VMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEA--------DIGLAMGIAGTEVAKESADVIILDDNFS 797 (840)
Q Consensus 729 v~ar~~P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~A--------dvgiamg~~g~~~ak~~aDivlldd~f~ 797 (840)
+-.+..+.+|...++.+.+.++ ..++++||+.||.+|++.+ ..|++|+ .| ..+..|++++. +..
T Consensus 159 ~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~~~~~A~~~~~--~~~ 233 (244)
T TIGR00685 159 VELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--SKKTVAKFHLT--GPQ 233 (244)
T ss_pred EEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--CcCCCceEeCC--CHH
Confidence 4445567899999999877755 4789999999999999999 5788885 33 23567899885 477
Q ss_pred HHHHHHH
Q 003189 798 TIVTVAK 804 (840)
Q Consensus 798 ~i~~~i~ 804 (840)
.+...+.
T Consensus 234 ~v~~~L~ 240 (244)
T TIGR00685 234 QVLEFLG 240 (244)
T ss_pred HHHHHHH
Confidence 7666553
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=94.40 E-value=0.081 Score=54.57 Aligned_cols=97 Identities=18% Similarity=0.253 Sum_probs=57.1
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHH-HHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKA-IARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~-iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
++.||+.+.++.|++.|+++.++||-....... ..+..|+......++.+.+.. + .+..|.-
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~---------------~-~~~KP~p- 140 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPE---------------V-KQGKPAP- 140 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhh---------------c-cCCCCCc-
Confidence 568999999999999999999999987654332 222223322111122111000 0 0111211
Q ss_pred HHHHHHHHHh----C-CCEEEEEcCCccCHHHhhhCCccE
Q 003189 739 HTLVKHLRTT----L-GEVVAVTGDGTNDAPALHEADIGL 773 (840)
Q Consensus 739 ~~~V~~l~~~----~-g~~v~~~GDG~ND~~al~~Advgi 773 (840)
.-+...+++. . .+.+.|+||...|+.+-+.|++-.
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 141 DIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred HHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeE
Confidence 1222223322 0 267999999999999999999853
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=94.38 E-value=0.097 Score=54.15 Aligned_cols=111 Identities=23% Similarity=0.349 Sum_probs=72.1
Q ss_pred CCCcchHHHHHHH--HhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChh-hhcCCHHHHhhhcCC-ceEEEecCc
Q 003189 660 PMRPGVKESVAIC--RSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE-FREKSDEELSKLIPK-IQVMARSSP 735 (840)
Q Consensus 660 ~lR~~~~~aI~~l--~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~-~~~~~~~~~~~~~~~-~~v~ar~~P 735 (840)
|+.|+.+++++.| ++.|+.++++|--|..--..+-+.-|+...-..+++.+. +.. .....+.|. ..-+.++.|
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~---~G~l~v~pyh~h~C~~C~~ 147 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDA---DGRLRVRPYHSHGCSLCPP 147 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecC---CceEEEeCccCCCCCcCCC
Confidence 6789999999999 568999999999999999999999998643222332221 110 000000000 011224444
Q ss_pred -ccHHHHHHHHHHh---CC---CEEEEEcCCccCHH-Hh--hhCCccE
Q 003189 736 -MDKHTLVKHLRTT---LG---EVVAVTGDGTNDAP-AL--HEADIGL 773 (840)
Q Consensus 736 -~~K~~~V~~l~~~---~g---~~v~~~GDG~ND~~-al--~~Advgi 773 (840)
.=|..+++.+++. .| ..|.++|||.||.. ++ +.+|+-+
T Consensus 148 NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~ 195 (234)
T PF06888_consen 148 NMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVF 195 (234)
T ss_pred ccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEe
Confidence 4799999998765 24 68999999999954 43 3455443
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=94.29 E-value=0.15 Score=49.77 Aligned_cols=94 Identities=23% Similarity=0.205 Sum_probs=61.5
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCC---------------HHHHHHHHHHcCCccCCCcccc----ChhhhcCCHHHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDN---------------INTAKAIARECGILTDNGIAIE----GPEFREKSDEEL 720 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~---------------~~ta~~iA~~~Gi~~~~~~~~~----g~~~~~~~~~~~ 720 (840)
++-|++.+++++|+++|+++.++|.-. ...+..+.+.+|+.-. ..++. ..+
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd-~ii~~~~~~~~~--------- 98 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFD-DVLICPHFPDDN--------- 98 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCcee-EEEECCCCCCCC---------
Confidence 457899999999999999999999852 3456667777777410 01110 000
Q ss_pred hhhcCCceEEEecCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEE
Q 003189 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA 774 (840)
Q Consensus 721 ~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgia 774 (840)
+. ...| |..++..+.+++| +.+.|+||+.+|..+-+.|++-..
T Consensus 99 --------~~-~~KP--~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 99 --------CD-CRKP--KIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred --------CC-CCCC--CHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 00 0122 2344444444434 469999999999999999988643
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.096 Score=46.79 Aligned_cols=89 Identities=22% Similarity=0.306 Sum_probs=56.5
Q ss_pred eeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHH---HHcCCccCCCccccChhhhcCCHHHHhhhcCCceE
Q 003189 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA---RECGILTDNGIAIEGPEFREKSDEELSKLIPKIQV 729 (840)
Q Consensus 653 g~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA---~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v 729 (840)
|++...+.+=|++.++|+.|+++|++++++|-....+...++ +.+|+....+. +
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~-----------------------i 63 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDE-----------------------I 63 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGG-----------------------E
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCE-----------------------E
Confidence 566667888999999999999999999999998855544444 66787643111 2
Q ss_pred EEecCcccHHHHHHHHHH-hCCCEEEEEcCCccCHHHhhhCC
Q 003189 730 MARSSPMDKHTLVKHLRT-TLGEVVAVTGDGTNDAPALHEAD 770 (840)
Q Consensus 730 ~ar~~P~~K~~~V~~l~~-~~g~~v~~~GDG~ND~~al~~Ad 770 (840)
+... ....+.|++ ..+..|.++|.. .....++.++
T Consensus 64 ~ts~-----~~~~~~l~~~~~~~~v~vlG~~-~l~~~l~~~G 99 (101)
T PF13344_consen 64 ITSG-----MAAAEYLKEHKGGKKVYVLGSD-GLREELREAG 99 (101)
T ss_dssp EEHH-----HHHHHHHHHHTTSSEEEEES-H-HHHHHHHHTT
T ss_pred EChH-----HHHHHHHHhcCCCCEEEEEcCH-HHHHHHHHcC
Confidence 2211 234445555 236888888865 5556666654
|
... |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=94.12 E-value=0.17 Score=55.45 Aligned_cols=91 Identities=10% Similarity=0.116 Sum_probs=71.8
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH----cCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE----CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~----~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (840)
++.+++.++++.|++.|+.+.++|.-+...+..+.+. +|+...- ......+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f-------------------------~~~~~~~ 85 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF-------------------------DARSINW 85 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe-------------------------eEEEEec
Confidence 4578999999999999999999999999999999888 7775310 1112335
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEe
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAM 775 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiam 775 (840)
..|...++.+.+.+| +.++|+||...|..+.+.+...+.+
T Consensus 86 ~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 86 GPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTL 128 (320)
T ss_pred CchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCcc
Confidence 567777777655544 7899999999999999998877644
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=93.81 E-value=0.27 Score=48.32 Aligned_cols=91 Identities=11% Similarity=0.145 Sum_probs=58.1
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHH------------HHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCce
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNIN------------TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ 728 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~------------ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 728 (840)
+-||+.++++.|+++|+++.++|.-+.. .+..+.+.+|+.. ..++.+..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~~----------------- 103 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATHA----------------- 103 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecCC-----------------
Confidence 4599999999999999999999975542 4566778888742 11111110
Q ss_pred EEEecCcccHHHHHHHHHHhCC-----CEEEEEcCCc--------cCHHHhhhCCccE
Q 003189 729 VMARSSPMDKHTLVKHLRTTLG-----EVVAVTGDGT--------NDAPALHEADIGL 773 (840)
Q Consensus 729 v~ar~~P~~K~~~V~~l~~~~g-----~~v~~~GDG~--------ND~~al~~Advgi 773 (840)
... ..|. ..+++.+.+++| +.+.|+||.. +|..+-++|++-.
T Consensus 104 ~~~-~KP~--p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 104 GLY-RKPM--TGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred CCC-CCCc--cHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 000 1222 223333333334 5699999986 6999999887654
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=93.67 E-value=0.17 Score=47.34 Aligned_cols=39 Identities=5% Similarity=0.135 Sum_probs=34.9
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCC-CHHHHHHHHHHcC
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGD-NINTAKAIARECG 698 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD-~~~ta~~iA~~~G 698 (840)
++.|++.+.++.|+++|+++.++|+. ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999999 7777777777766
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=93.54 E-value=0.38 Score=49.58 Aligned_cols=95 Identities=13% Similarity=0.165 Sum_probs=62.9
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcC---CccCCCccccChhhhcCCHHHHhhhcCCceEEEecC
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECG---ILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 734 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~G---i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~ 734 (840)
+-++.||+.+++++|+++|+++.++|..+......+.+..+ +..- +...+. . +.+ ..
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~-----------------f~~~fd-~-~~g-~K 152 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY-----------------FSGYFD-T-TVG-LK 152 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh-----------------cceEEE-e-Ccc-cC
Confidence 45789999999999999999999999998877777666552 2110 000000 0 111 12
Q ss_pred cccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEE
Q 003189 735 PMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA 774 (840)
Q Consensus 735 P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgia 774 (840)
|+ ..-+.+.+++. | +.++|+||...|+.+-++|++-..
T Consensus 153 P~-p~~y~~i~~~l-gv~p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 153 TE-AQSYVKIAGQL-GSPPREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred CC-HHHHHHHHHHh-CcChhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 32 12233333333 4 679999999999999999998643
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=92.95 E-value=0.29 Score=62.13 Aligned_cols=117 Identities=17% Similarity=0.256 Sum_probs=77.0
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCc-cCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL-TDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
+-||+.+.+++|+++|+++.++|+-....+..+-+..|+. .....++.+.+. .+..|. -
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~------------------~~~KP~--P 221 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAF------------------ENLKPA--P 221 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECccc------------------ccCCCC--H
Confidence 5799999999999999999999999999999998999985 212222222221 122232 2
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc-EEec--CCCcHHHHhhcCEEeccCCchHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG-LAMG--IAGTEVAKESADVIILDDNFSTI 799 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg-iamg--~~g~~~ak~~aDivlldd~f~~i 799 (840)
++.....+++| +.+.|+||..+|+.+-+.|++- |.+. ....+.....+|+++-+ +..+
T Consensus 222 e~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~--l~el 285 (1057)
T PLN02919 222 DIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKD--IGNI 285 (1057)
T ss_pred HHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC--hHHC
Confidence 22222222223 6789999999999999999973 3332 12223344568888744 5553
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.64 E-value=0.11 Score=53.52 Aligned_cols=93 Identities=14% Similarity=0.180 Sum_probs=62.2
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC-CccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
++.|++.+.++.| ++++.++|+.....+...-+..|+...- ..++.+.+.. +..| +
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~------------------~~KP--~ 144 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQ------------------RWKP--D 144 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcC------------------CCCC--C
Confidence 4568999999988 4999999999988888888888886432 1222222110 1122 1
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEe
Q 003189 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAM 775 (840)
Q Consensus 739 ~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiam 775 (840)
-.++....+++| +.++|+||..+|..+-+.|++....
T Consensus 145 p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 145 PALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 233333222324 5689999999999999999987653
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=92.44 E-value=2.1 Score=47.23 Aligned_cols=63 Identities=19% Similarity=0.240 Sum_probs=45.5
Q ss_pred ccHHHHHHHHHHhCC------CEEEEEcCCccCHHHhhhC-----CccEEecCCCcHHHHhhcCEEeccCCchHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG------EVVAVTGDGTNDAPALHEA-----DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g------~~v~~~GDG~ND~~al~~A-----dvgiamg~~g~~~ak~~aDivlldd~f~~i~~~i 803 (840)
-+|...|+.|.+.+| ..+.++||...|-.|++.. ++||.+|.... ...|++.|- +...+...+
T Consensus 282 ~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k---~T~A~y~L~--dp~eV~~fL 355 (366)
T PLN03017 282 WDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK---DTDASYSLQ--DPSEVMDFL 355 (366)
T ss_pred CCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC---CCcceEeCC--CHHHHHHHH
Confidence 499999999887644 2588999999999999865 47777873111 245888873 477666554
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=92.24 E-value=0.77 Score=48.23 Aligned_cols=39 Identities=26% Similarity=0.357 Sum_probs=33.2
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcC----CccCHHHhhh-CCccEEec
Q 003189 736 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHE-ADIGLAMG 776 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~~GD----G~ND~~al~~-Advgiamg 776 (840)
.+|...++.|+ . .+.|+++|| |.||.+||+. -=.|+++-
T Consensus 188 vnKg~al~~L~-~-~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 188 WDKTYCLQFLE-D-FDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCHHHHHHHhc-C-cCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 68999999998 5 678899999 8999999997 55688774
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=92.06 E-value=0.14 Score=52.34 Aligned_cols=89 Identities=16% Similarity=0.203 Sum_probs=55.3
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHH--HHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEe----
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINT--AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR---- 732 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~t--a~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar---- 732 (840)
-++.|++.+.++.|++.|+++.++|...... ........|+... +.. +++.
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~---------------------fd~--v~~s~~~~ 149 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMAL---------------------FDA--VVESCLEG 149 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhh---------------------CCE--EEEeeecC
Confidence 3678999999999999999999999875432 2222223343221 111 2211
Q ss_pred -cCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc
Q 003189 733 -SSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (840)
Q Consensus 733 -~~P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg 772 (840)
..|.- .+.+...+++| +.++|+||...|+.+-++|++-
T Consensus 150 ~~KP~p--~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 150 LRKPDP--RIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred CCCCCH--HHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 12322 22222222224 5688899999999999999984
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.10 E-value=0.3 Score=49.41 Aligned_cols=94 Identities=15% Similarity=0.173 Sum_probs=57.5
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH-cCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~-~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
++.|++.++++.|++.|+++.++|.-+.......-.. .++...-..++...+ +....| +
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~------------------~~~~KP--~ 143 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQD------------------LGMRKP--E 143 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecc------------------cCCCCC--C
Confidence 4689999999999999999999999876654433222 233211111111110 001123 2
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccE
Q 003189 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (840)
Q Consensus 739 ~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgi 773 (840)
..+.+...+++| +.+.++||...|+.+-++|++-.
T Consensus 144 p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 144 ARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred HHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 333333333324 56899999999999999998854
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=90.72 E-value=0.51 Score=48.94 Aligned_cols=90 Identities=21% Similarity=0.280 Sum_probs=57.6
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHH---HHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCc
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNIN---TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~---ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (840)
+|.=|++.+.++.+++.|++|+++||++.. ....=-++.|+...+.+++.+..-.. .....
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~----------------~~~~~ 177 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPS----------------KKSAV 177 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTS----------------S----
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccccc----------------ccccc
Confidence 466688999999999999999999998854 22223355676432222221111000 00012
Q ss_pred ccHHHHHHHHHHhCC-CEEEEEcCCccCHHH
Q 003189 736 MDKHTLVKHLRTTLG-EVVAVTGDGTNDAPA 765 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g-~~v~~~GDG~ND~~a 765 (840)
.-|...-+.+++. | ++++++||..+|...
T Consensus 178 ~yK~~~r~~i~~~-Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 178 EYKSERRKEIEKK-GYRIIANIGDQLSDFSG 207 (229)
T ss_dssp --SHHHHHHHHHT-TEEEEEEEESSGGGCHC
T ss_pred ccchHHHHHHHHc-CCcEEEEeCCCHHHhhc
Confidence 3488888888887 7 688999999999765
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=90.45 E-value=0.93 Score=44.33 Aligned_cols=82 Identities=20% Similarity=0.175 Sum_probs=61.9
Q ss_pred cCCCCcchHHHHHHHHhCCC--EEEEEcCC-------CHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCce
Q 003189 658 KDPMRPGVKESVAICRSAGI--TVRMVTGD-------NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ 728 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi--~v~m~TGD-------~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 728 (840)
++.+-|+..+.+++|++.+. +|.++|-- +...|.++++.+||.--
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpvl-------------------------- 110 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPVL-------------------------- 110 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcEE--------------------------
Confidence 67888999999999999976 59999986 48899999999998620
Q ss_pred EEEecCcccHHHHHHHHHHh----CCCEEEEEcCCc-cCHHH
Q 003189 729 VMARSSPMDKHTLVKHLRTT----LGEVVAVTGDGT-NDAPA 765 (840)
Q Consensus 729 v~ar~~P~~K~~~V~~l~~~----~g~~v~~~GDG~-ND~~a 765 (840)
.+....|.-..++.+.++.+ .-+.++|+||-. -|+-+
T Consensus 111 ~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~ 152 (168)
T PF09419_consen 111 RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLM 152 (168)
T ss_pred EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHH
Confidence 12335787667788877643 135699999974 34443
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=90.26 E-value=0.99 Score=45.45 Aligned_cols=94 Identities=15% Similarity=0.123 Sum_probs=57.7
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.||+.++++.|++.+ +..++|.-+..+....-+.+|+..-. ...+ ...+.++... -|-
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f-----------------~~~f-~~i~~~~~~~-~kp 133 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALF-----------------PGAF-SEVLMCGHDE-SKE 133 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhC-----------------CCcc-cEEEEeccCc-ccH
Confidence 46899999999999985 56666765544444455566664210 0000 0012233222 244
Q ss_pred HHHHHHHHhCC-CEEEEEcCCccCHHHhhhC--CccE
Q 003189 740 TLVKHLRTTLG-EVVAVTGDGTNDAPALHEA--DIGL 773 (840)
Q Consensus 740 ~~V~~l~~~~g-~~v~~~GDG~ND~~al~~A--dvgi 773 (840)
.++....+++| +.++|+||..+|..+-++| ++-.
T Consensus 134 ~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 134 KLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred HHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 55555444446 4578999999999999999 9853
|
2 hypothetical protein; Provisional |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.16 E-value=0.45 Score=47.70 Aligned_cols=121 Identities=21% Similarity=0.268 Sum_probs=71.2
Q ss_pred CCCcchHHHHHHHHhCCC-EEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCC-c-eEEEecCc-
Q 003189 660 PMRPGVKESVAICRSAGI-TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPK-I-QVMARSSP- 735 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi-~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~-~-~v~ar~~P- 735 (840)
|+-|+..++|+.+++.|- .++++|--|..-...+-+..||..-...+.+.+.--. ..-...+.|. . .-+.+|.|
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~d--a~G~L~v~pyH~~hsC~~CPsN 161 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVD--ASGRLLVRPYHTQHSCNLCPSN 161 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccC--CCCcEEeecCCCCCccCcCchh
Confidence 678999999999999996 9999999999888888888887531001111000000 0000000000 0 01222222
Q ss_pred ccHHHHHHHHHHhC---C---CEEEEEcCCccC-HHHhhhCCccEEecCCCcHH
Q 003189 736 MDKHTLVKHLRTTL---G---EVVAVTGDGTND-APALHEADIGLAMGIAGTEV 782 (840)
Q Consensus 736 ~~K~~~V~~l~~~~---g---~~v~~~GDG~ND-~~al~~Advgiamg~~g~~~ 782 (840)
.=|..++..++... | +.+.++|||.|| +|+++...--+||--.|-+.
T Consensus 162 mCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl 215 (256)
T KOG3120|consen 162 MCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPL 215 (256)
T ss_pred hhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCch
Confidence 34677776665441 2 378999999999 56776666666664444444
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.37 E-value=0.62 Score=46.42 Aligned_cols=89 Identities=16% Similarity=0.146 Sum_probs=59.6
Q ss_pred CcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHH
Q 003189 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTL 741 (840)
Q Consensus 662 R~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~ 741 (840)
-|+ .+.++.|++. ++..++|+.....+..+-+..|+...-..++..++.. +..| +..+
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~------------------~~KP--~p~~ 147 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQ------------------HHKP--APDT 147 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhcc------------------CCCC--ChHH
Confidence 354 6889999865 8999999999999999999999864322333222211 1122 2223
Q ss_pred HHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc
Q 003189 742 VKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (840)
Q Consensus 742 V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg 772 (840)
.....+++| +.+.|+||..+|+.+-+.|++-
T Consensus 148 ~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 148 FLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 333322324 4578999999999999999875
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=88.73 E-value=0.91 Score=49.51 Aligned_cols=49 Identities=22% Similarity=0.369 Sum_probs=38.8
Q ss_pred eeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHH---HHcCCcc
Q 003189 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA---RECGILT 701 (840)
Q Consensus 653 g~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA---~~~Gi~~ 701 (840)
|++.-.+.+=|++.++|+.|++.|++++++|+....+...++ +++|+..
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~ 88 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNV 88 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 444445566699999999999999999999999966666666 5678753
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=88.49 E-value=1.6 Score=42.05 Aligned_cols=108 Identities=21% Similarity=0.301 Sum_probs=70.4
Q ss_pred eecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHH---HHHc-----CCccCCCccccChhhhcCCHHHHhhhcC
Q 003189 654 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAI---AREC-----GILTDNGIAIEGPEFREKSDEELSKLIP 725 (840)
Q Consensus 654 ~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~i---A~~~-----Gi~~~~~~~~~g~~~~~~~~~~~~~~~~ 725 (840)
+++ +|-.++++.+.++.+++.|+++..+|++....+... -.+. ++. .+.++..++ .+...+.
T Consensus 22 ~~G-~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP--~Gpv~~sP~-------~l~~al~ 91 (157)
T PF08235_consen 22 ILG-KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLP--DGPVLLSPD-------SLFSALH 91 (157)
T ss_pred ccC-chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCC--CCCEEECCc-------chhhhhh
Confidence 344 479999999999999999999999999996555432 2222 332 222221110 0000000
Q ss_pred CceEEEecCcccHHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCcc
Q 003189 726 KIQVMARSSPMDKHTLVKHLRTTL----GEVVAVTGDGTNDAPALHEADIG 772 (840)
Q Consensus 726 ~~~v~ar~~P~~K~~~V~~l~~~~----g~~v~~~GDG~ND~~al~~Advg 772 (840)
+ .+..+-.-+.|...++.++..| ...++..|...+|+.+-++++|-
T Consensus 92 r-Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 92 R-EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred c-cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 0 0444434477889999988763 36788899999999999987654
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=88.26 E-value=0.8 Score=45.56 Aligned_cols=92 Identities=11% Similarity=0.005 Sum_probs=60.8
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEe---cCcc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR---SSPM 736 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar---~~P~ 736 (840)
++.|++.+.+++|+ .++.++|.-+...+..+.+.+|+...-..++.+.+ +-.+ ..|.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~-----------------~~~~~~~~KP~ 143 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDT-----------------ANPDYLLPKPS 143 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeec-----------------ccCccCCCCCC
Confidence 46789999999998 47899999999999999999998542222222111 0001 1332
Q ss_pred cHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccE
Q 003189 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (840)
Q Consensus 737 ~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgi 773 (840)
..+.+...+++| +.++|+||...|..+-+.|++-.
T Consensus 144 --p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 144 --PQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred --HHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 223333222224 56889999999999999888753
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=86.46 E-value=7.5 Score=41.62 Aligned_cols=49 Identities=18% Similarity=0.224 Sum_probs=35.9
Q ss_pred eeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHH---HHHHHHHHcCCcc
Q 003189 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNIN---TAKAIARECGILT 701 (840)
Q Consensus 653 g~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~---ta~~iA~~~Gi~~ 701 (840)
|++.-.+.+-|++.++|++|++.|+++.++|+.... ....--+++|+..
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~ 62 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNG 62 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 344445677889999999999999999999996533 3223336678753
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.41 E-value=1.5 Score=45.30 Aligned_cols=99 Identities=16% Similarity=0.195 Sum_probs=73.5
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCccc
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (840)
..++.||+.+.+++|++.|+.+...|+-....+..+.+..|+......++.+.+...- .-.|+-
T Consensus 84 ~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~~----------------KP~Pd~ 147 (221)
T COG0637 84 GLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVARG----------------KPAPDI 147 (221)
T ss_pred CCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhcC----------------CCCCHH
Confidence 3478999999999999999999999999999999999999998755455554442211 123333
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 003189 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (840)
Q Consensus 738 K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgi 773 (840)
=+...+.|.-. ...+.++.|..|.+.|-++|+.-+
T Consensus 148 yL~Aa~~Lgv~-P~~CvviEDs~~Gi~Aa~aAGm~v 182 (221)
T COG0637 148 YLLAAERLGVD-PEECVVVEDSPAGIQAAKAAGMRV 182 (221)
T ss_pred HHHHHHHcCCC-hHHeEEEecchhHHHHHHHCCCEE
Confidence 34444443222 467889999999999999999754
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=86.19 E-value=3.7 Score=43.16 Aligned_cols=50 Identities=14% Similarity=0.082 Sum_probs=40.7
Q ss_pred eeecccCCCCcchHHHHHHHHhCCCEEEEEcC---CCHHHHHHHHHHcCCccC
Q 003189 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTG---DNINTAKAIARECGILTD 702 (840)
Q Consensus 653 g~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TG---D~~~ta~~iA~~~Gi~~~ 702 (840)
|++.-.+.+-|++.++|++|++.|++++++|| ..........+++|+...
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 44444566678999999999999999999996 678888888888998643
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=85.30 E-value=3.4 Score=43.48 Aligned_cols=87 Identities=21% Similarity=0.295 Sum_probs=54.0
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHH----HHHHHHHHcCCccCCCccccChh-hhcCCHHHHhhhcCCceEEEe
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNIN----TAKAIARECGILTDNGIAIEGPE-FREKSDEELSKLIPKIQVMAR 732 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~----ta~~iA~~~Gi~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~v~ar 732 (840)
+.|.=|++.+..+.+++.|++|+++||+... |...+ ++.|+.....+++-+.. -+ ..
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~~~LiLR~~~D~~-----------------~~ 204 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTWEKLILKDPQDNS-----------------AE 204 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCcceeeecCCCCCc-----------------cc
Confidence 5677789999999999999999999999854 33333 34577532222221110 00 00
Q ss_pred cCcccHHHHHHHHHHhCC-CEEEEEcCCccCH
Q 003189 733 SSPMDKHTLVKHLRTTLG-EVVAVTGDGTNDA 763 (840)
Q Consensus 733 ~~P~~K~~~V~~l~~~~g-~~v~~~GDG~ND~ 763 (840)
....-|...-+.+.+. | ++++.+||..+|.
T Consensus 205 ~av~yKs~~R~~li~e-GYrIv~~iGDq~sDl 235 (275)
T TIGR01680 205 NAVEYKTAARAKLIQE-GYNIVGIIGDQWNDL 235 (275)
T ss_pred hhHHHHHHHHHHHHHc-CceEEEEECCCHHhc
Confidence 0012244444555555 6 6889999999996
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=84.57 E-value=2.2 Score=45.06 Aligned_cols=49 Identities=29% Similarity=0.388 Sum_probs=38.0
Q ss_pred eeecccCC----CCcchHHHHHHHHhCCCEEEEEcCCCHHH---HHHHHHHcCCcc
Q 003189 653 GIVGIKDP----MRPGVKESVAICRSAGITVRMVTGDNINT---AKAIARECGILT 701 (840)
Q Consensus 653 g~~~~~D~----lR~~~~~aI~~l~~aGi~v~m~TGD~~~t---a~~iA~~~Gi~~ 701 (840)
|++.-.+. +-|++.++|++|+++|++++++||.+..+ .....+++|+..
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~ 65 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDI 65 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 44444555 78899999999999999999999977665 455556678754
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=84.48 E-value=1.8 Score=46.03 Aligned_cols=52 Identities=15% Similarity=0.177 Sum_probs=43.7
Q ss_pred CC-cchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhh
Q 003189 661 MR-PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEF 712 (840)
Q Consensus 661 lR-~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~ 712 (840)
+| |++.+++++|+++|+++.++|+-....+...-+++||......++.+.+.
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv 198 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHK 198 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCcc
Confidence 67 99999999999999999999999999999999999998644445544443
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=84.40 E-value=2.6 Score=44.31 Aligned_cols=49 Identities=18% Similarity=0.281 Sum_probs=41.3
Q ss_pred eeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHc---CCcc
Q 003189 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC---GILT 701 (840)
Q Consensus 653 g~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~---Gi~~ 701 (840)
|++.-.+.+-|++.++++.|++.|++++++|+....+...+++++ |+..
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~ 61 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDV 61 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 555566788999999999999999999999999988887777764 6643
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=81.73 E-value=6.1 Score=45.84 Aligned_cols=118 Identities=14% Similarity=0.056 Sum_probs=69.7
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH-cCCccCCCccccChhhhcCCHHHHhhhcCCceEEEe------c
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR------S 733 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~-~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar------~ 733 (840)
+++++.+.+ ++.|.+ +++|+-...-++.+|++ +|++.- -|.+++.- .+-..-++ +
T Consensus 111 l~~~a~~~~---~~~g~~-vvVSASp~~~Vepfa~~~LGid~V-----IgTeLev~---------~~G~~TG~i~g~~~c 172 (497)
T PLN02177 111 VHPETWRVF---NSFGKR-YIITASPRIMVEPFVKTFLGADKV-----LGTELEVS---------KSGRATGFMKKPGVL 172 (497)
T ss_pred cCHHHHHHH---HhCCCE-EEEECCcHHHHHHHHHHcCCCCEE-----EecccEEC---------cCCEEeeeecCCCCC
Confidence 666655544 567754 99999999999999987 898631 01111100 00011222 2
Q ss_pred CcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcH-HH--HhhcCEEeccCCch
Q 003189 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE-VA--KESADVIILDDNFS 797 (840)
Q Consensus 734 ~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~-~a--k~~aDivlldd~f~ 797 (840)
.-++|...++..... .......||..||.|||+.||-..+.+.+... .. +--.-+|..|..+.
T Consensus 173 ~Ge~Kv~rl~~~~g~-~~~~~aYgDS~sD~plL~~a~e~y~V~~~~~~~~~~~~~~~~~~fhdgrl~ 238 (497)
T PLN02177 173 VGDHKRDAVLKEFGD-ALPDLGLGDRETDHDFMSICKEGYMVPRTKCEPLPRNKLLSPVIFHEGRLV 238 (497)
T ss_pred ccHHHHHHHHHHhCC-CCceEEEECCccHHHHHHhCCccEEeCCCCCCcCCcccCCCceeeeCCccc
Confidence 335688777643211 11235779999999999999999999842211 11 22345666665543
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=81.64 E-value=2.6 Score=43.91 Aligned_cols=91 Identities=12% Similarity=0.138 Sum_probs=55.7
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++-||+.++++.|++. +++.++|.-+.. .+..|+...-..++...+. .+..|. .
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~------------------~~~KP~--p 166 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPH------------------GRSKPF--S 166 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecccC------------------CcCCCc--H
Confidence 4668999999999975 889999886653 2556764321111111110 111232 3
Q ss_pred HHHHHHHHhCC---CEEEEEcCC-ccCHHHhhhCCccEEec
Q 003189 740 TLVKHLRTTLG---EVVAVTGDG-TNDAPALHEADIGLAMG 776 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG-~ND~~al~~Advgiamg 776 (840)
.+.....+++| +.+.||||. ..|+.+-+.|++-....
T Consensus 167 ~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v 207 (238)
T PRK10748 167 DMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWI 207 (238)
T ss_pred HHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEE
Confidence 33333222224 569999999 59999999999865543
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=81.47 E-value=30 Score=44.17 Aligned_cols=197 Identities=13% Similarity=0.091 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhHhh----hcCc-eEEE----EECCeEEEEeccCCCCCcEEEecCCCcccccEEEEee
Q 003189 209 SILLVVFVTATSDYKQSLQFKDLDRE----KKKI-TVQV----ARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSG 279 (840)
Q Consensus 209 ~illv~~v~~~~~~~~~~~~~~l~~~----~~~~-~v~V----~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g 279 (840)
.-.++.+..-.+......++.++... ..+. ...| +.-|....+..-|.+|.|.+.++..+ +=+|=-.+.|
T Consensus 116 i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~-l~VdeS~LTG 194 (997)
T TIGR01106 116 ITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG-CKVDNSSLTG 194 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC-cEEEccccCC
Confidence 33444555556666666666665331 1121 2222 23588999999999999999998653 4566667777
Q ss_pred cceEEecccccCCCCccccC----CCCCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCC-CCCCChHHHHHHHHH
Q 003189 280 FSVLINESSLTGESEPVNVN----ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG-GDDETPLQVKLNGVA 354 (840)
Q Consensus 280 ~~l~VDES~LTGES~pv~k~----~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~-~~~~tplq~~l~~~a 354 (840)
++.-|.-..-.-+..|.... .+. .+.+|+...-=...+.=|..|.-. ++++..... ..-+..+.+..+.+.
T Consensus 195 ES~pv~K~~~~~~~~~~~~~n~l~~Gt-~v~~G~~~~~V~~tG~~T~~g~i~---~~~~~~~~~~~pl~~~~~~~~~~~~ 270 (997)
T TIGR01106 195 ESEPQTRSPEFTHENPLETRNIAFFST-NCVEGTARGIVVNTGDRTVMGRIA---SLASGLENGKTPIAIEIEHFIHIIT 270 (997)
T ss_pred CCCceeccCCCcccCccccCCeEEecc-EeeeeeEEEEEEEccccchhhHHH---hhhhhcccCCCcHHHHHHHHHHHHH
Confidence 76444332211111232221 233 477776433222334445555433 333332222 222244555666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 003189 355 TIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAM 428 (840)
Q Consensus 355 ~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~ 428 (840)
.....+++++.++.++.. ..+.. .+...+...++.+-.+.|..++++...+.....
T Consensus 271 ~~~~~~~~~~~~~~~~~~-~~~~~-----------------~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~ 326 (997)
T TIGR01106 271 GVAVFLGVSFFILSLILG-YTWLE-----------------AVIFLIGIIVANVPEGLLATVTVCLTLTAKRMA 326 (997)
T ss_pred HHHHHHHHHHHHHHHHhc-CCHHH-----------------HHHHHHHHHhhcCCccchHHHHHHHHHHHHHHH
Confidence 665555554444433221 11110 122334455555777788888888887765433
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=81.27 E-value=63 Score=41.59 Aligned_cols=20 Identities=25% Similarity=0.430 Sum_probs=11.8
Q ss_pred CcEEEecCCCcccccEEEEe
Q 003189 259 GDIVHLCMGDQVPADGLFVS 278 (840)
Q Consensus 259 GDIV~l~~Gd~VPaDgvll~ 278 (840)
|....+..-|.+|-|.++++
T Consensus 237 g~~~~I~s~eLvpGDiv~l~ 256 (1054)
T TIGR01657 237 GKWVTIASDELVPGDIVSIP 256 (1054)
T ss_pred CEEEEEEcccCCCCCEEEEe
Confidence 55555556666666666664
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=80.98 E-value=25 Score=43.44 Aligned_cols=159 Identities=19% Similarity=0.173 Sum_probs=81.5
Q ss_pred ECCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecccccCCCCccccCCCCCeEEeccEEeeceEEEEEEEE
Q 003189 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTV 323 (840)
Q Consensus 244 RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv~k~~~~~~l~sGt~v~~G~~~~~V~~v 323 (840)
.-|....+..-|.+|-|.+.++ |+..=+|=-.+.|++.-|+-. +|. .+ ..+ ..+.+|+-..-=...+.=|..
T Consensus 111 v~GDiV~l~~Gd~IPaDg~vi~-g~~~~VDeS~LTGES~PV~K~--~~~--~v--~aG-T~v~~G~~~~~V~~tG~~T~~ 182 (755)
T TIGR01647 111 VPGDVVRLKIGDIVPADCRLFE-GDYIQVDQAALTGESLPVTKK--TGD--IA--YSG-STVKQGEAEAVVTATGMNTFF 182 (755)
T ss_pred cCCCEEEECCCCEEeceEEEEe-cCceEEEcccccCCccceEec--cCC--ee--ecc-CEEEccEEEEEEEEcCCccHH
Confidence 3588899999999999998885 444555666677776444432 121 11 122 346666644433333333333
Q ss_pred cccchHHHHHHhhcCCCCC-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHH
Q 003189 324 GMRTQWGKLMATLSEGGDD-ETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFA 402 (840)
Q Consensus 324 G~~T~~g~i~~~~~~~~~~-~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (840)
|. +.++++........ +..+.+....+......+++++.++.+......+. . .+...+.
T Consensus 183 g~---i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~----------------~~~~~i~ 242 (755)
T TIGR01647 183 GK---AAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESFR-E----------------GLQFALV 242 (755)
T ss_pred HH---HHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH-H----------------HHHHHHH
Confidence 32 22444433333222 22233333334333333222222222221111111 0 2334566
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 003189 403 IAVTIVVVAVPEGLPLAVTLSLAFAMKK 430 (840)
Q Consensus 403 ~ai~ilvva~P~~Lplav~l~l~~~~~~ 430 (840)
..+...-.+.|..+|+++.++.....++
T Consensus 243 vlv~a~P~~Lp~~~~~~la~g~~r~ak~ 270 (755)
T TIGR01647 243 LLVGGIPIAMPAVLSVTMAVGAAELAKK 270 (755)
T ss_pred HHHHhCCcchHHHHHHHHHHHHHHHHhC
Confidence 7777888889999999998887665544
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=80.84 E-value=16 Score=40.23 Aligned_cols=64 Identities=17% Similarity=0.260 Sum_probs=45.3
Q ss_pred ccHHHHHHHHHHhCC------CEEEEEcCCccCHHHhhhC-----CccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG------EVVAVTGDGTNDAPALHEA-----DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g------~~v~~~GDG~ND~~al~~A-----dvgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
-+|...|+.|.+.+| ..+.++||-..|-.|++.. ++||-+| .+.. .-.|++.|-+ ...+...+.
T Consensus 268 ~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg-~~~k--~T~A~y~L~d--p~eV~~~L~ 342 (354)
T PLN02151 268 WDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVS-KYAK--ETNASYSLQE--PDEVMEFLE 342 (354)
T ss_pred CCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEec-cCCC--CCcceEeCCC--HHHHHHHHH
Confidence 489999999887644 2489999999999999853 6777777 2221 2258888754 666665543
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=80.40 E-value=3.2 Score=44.25 Aligned_cols=50 Identities=20% Similarity=0.149 Sum_probs=41.3
Q ss_pred CC-cchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccCh
Q 003189 661 MR-PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGP 710 (840)
Q Consensus 661 lR-~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~ 710 (840)
+| |++.+++++|+++|+++.++|+.+...+..+.+.+|+......++.+.
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g 198 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGG 198 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECC
Confidence 46 899999999999999999999888888899999999975434444333
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 840 | ||||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 1e-72 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 3e-72 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 2e-71 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 1e-68 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 4e-68 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 4e-68 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 5e-68 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 3e-67 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 1e-41 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 1e-35 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 8e-17 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 9e-17 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 6e-16 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 2e-15 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 2e-15 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 5e-15 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 6e-15 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 2e-14 | ||
| 2voy_I | 128 | Cryoem Model Of Copa, The Copper Transporting Atpas | 2e-09 | ||
| 3gwi_A | 170 | Crystal Structure Of Mg-Atpase Nucleotide Binding D | 1e-05 | ||
| 2yj4_A | 263 | Conformational Changes In The Catalytic Domain Of T | 3e-04 | ||
| 2iye_A | 263 | Structure Of Catalytic Cpx-atpase Domain Copb-b Len | 3e-04 | ||
| 2yj3_A | 263 | Conformational Changes In The Catalytic Domain Of T | 4e-04 | ||
| 2kij_A | 124 | Solution Structure Of The Actuator Domain Of The Co | 7e-04 |
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 128 | Back alignment and structure |
|
| >pdb|3GWI|A Chain A, Crystal Structure Of Mg-Atpase Nucleotide Binding Domain Length = 170 | Back alignment and structure |
|
| >pdb|2YJ4|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2IYE|A Chain A, Structure Of Catalytic Cpx-atpase Domain Copb-b Length = 263 | Back alignment and structure |
|
| >pdb|2YJ3|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2KIJ|A Chain A, Solution Structure Of The Actuator Domain Of The Copper- Transporting Atpase Atp7a Length = 124 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 840 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 0.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 0.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 1e-177 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 1e-157 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 1e-157 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 7e-43 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 1e-41 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 5e-33 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 3e-32 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 1e-30 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 8e-29 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-13 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 1e-22 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 1e-10 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 4e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-06 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 4e-07 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 4e-06 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 5e-06 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 6e-06 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 1e-05 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 1e-05 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 2e-05 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 6e-05 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 6e-05 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 1e-04 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 2e-04 | |
| 2l1w_B | 26 | Vacuolar calcium ATPase BCA1 peptide; calmodulin, | 2e-04 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 2e-04 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 2e-04 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 2e-04 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 3e-04 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 4e-04 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 5e-04 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 5e-04 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 590 bits (1523), Expect = 0.0
Identities = 222/768 (28%), Positives = 343/768 (44%), Gaps = 94/768 (12%)
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
V + +K TS T G+S S G N +V L ++
Sbjct: 58 VAELEQKYQTSATKGLSASLA--AELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMW 115
Query: 181 VCALVSLVVGI---ATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQ------SLQ-FKD 230
V A + L+ + + L + ++ VV VT Y Q + FK+
Sbjct: 116 VAAAICLIAFAIQASEGDLTTDDNLYLALA--LIAVVVVTGCFGYYQEFKSTNIIASFKN 173
Query: 231 LDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLT 290
L ++ V R+G + +I+ L+ GD+V + GD+VPAD + ++ SSLT
Sbjct: 174 LVPQQ----ATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQGRKVDNSSLT 229
Query: 291 GESEPV--NVNALNPFLL-------SGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGD 341
GESEP + + L T G+ + LV G RT G++ + S +
Sbjct: 230 GESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVEN 289
Query: 342 DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFF 401
++TP+ +++ II + + F F V + G L + F
Sbjct: 290 EKTPIAIEIEHFVDIIAGLAILFGATFFIVAM---------------CIGYTFLRAMVF- 333
Query: 402 AIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTL 461
+ IVV VPEGL VT+ L+ K++ + +V++L A ET+GS + ICSDKTGTL
Sbjct: 334 --FMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTL 391
Query: 462 TTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQ-------SIFNNTGGEVV 514
T N MTV I D ++ + + L + + F + V
Sbjct: 392 TQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDAVP 451
Query: 515 IGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPE- 573
+ + ++G +ETA+L+F L G+ R+ V PFNS K + L +
Sbjct: 452 VPKR---IVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDP 508
Query: 574 --GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLAC 631
+ KGA E +L C L G+ +PL+E R L
Sbjct: 509 RDPRHVLVMKGAPERVLERCSSIL-IKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQ 567
Query: 632 MEI-------GNEFSADAP-IPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVT 683
+ + G F +A PT G + G+V + DP R V ++V CR+AGI V MVT
Sbjct: 568 LYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVT 627
Query: 684 GDNINTAKAIARECGILTDNG------------------------IAIEGPEFREKSDEE 719
GD+ TAKAIA GI+++ I G + ++ E
Sbjct: 628 GDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSE 687
Query: 720 LSKLIPKIQ--VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI 777
L + + V AR+SP K +V+ + LG +VAVTGDG ND+PAL +ADIG+AMGI
Sbjct: 688 LVEALRTHPEMVFARTSPQQKLVIVESCQR-LGAIVAVTGDGVNDSPALKKADIGVAMGI 746
Query: 778 AGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNV 825
AG++ AK +AD+I+LDDNF++IVT + GR ++ N++K + + LT N+
Sbjct: 747 AGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNI 794
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 588 bits (1518), Expect = 0.0
Identities = 228/767 (29%), Positives = 348/767 (45%), Gaps = 92/767 (11%)
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
++ + K T +T G++ + G N T P W+ L ++L
Sbjct: 53 LDELHNKYGTDLTRGLTNAR--AKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLW 110
Query: 181 VCALVSLVVGI---ATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQ------SLQ-FKD 230
+ A++ + ATE P + LG+V + VV VT Y Q + FK+
Sbjct: 111 IGAILCFLAYGIQAATEDEPANDNLYLGVV--LSTVVIVTGCFSYYQEAKSSRIMDSFKN 168
Query: 231 LDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLT 290
+ ++ V R+G + I+ ++ GD+V + GD++PAD +S ++ SSLT
Sbjct: 169 MVPQQ----ALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHGCKVDNSSLT 224
Query: 291 GESEPV--NVNAL--NPF-----LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGD 341
GESEP + NP T G+ + +V G RT G++ S
Sbjct: 225 GESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEV 284
Query: 342 DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFF 401
TP+ +++ II + +F V F + + G LE + F
Sbjct: 285 GRTPIAIEIEHFIHIITGVAVFLGVSFFILSL---------------ILGYSWLEAVIF- 328
Query: 402 AIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTL 461
+ I+V VPEGL VT+ L K+M LV++L A ET+GS ++ICSDKTGTL
Sbjct: 329 --LIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTL 386
Query: 462 TTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIF--NNTGGEVVIGEGN 519
T N MTV +I E D ++ ++ L + N G+ N
Sbjct: 387 TQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRA--VFQAGQDN 444
Query: 520 ----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP--- 572
K + G +E+A+L+ L G Q R + + PFNS K + E
Sbjct: 445 VPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSS 504
Query: 573 EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACM 632
E + + KGA E IL C L NG PL E + R L
Sbjct: 505 ESRYLLVMKGAPERILDRCSTIL-LNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHF 563
Query: 633 EI-------GNEFSADAP-IPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTG 684
+ G F AD P PT +G++ + DP R V ++V CRSAGI V MVTG
Sbjct: 564 ALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTG 623
Query: 685 DNINTAKAIARECGILTDNG------------------------IAIEGPEFREKSDEEL 720
D+ TAKAIA+ GI+++ + G + ++ S E L
Sbjct: 624 DHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVL 683
Query: 721 SKLIPKIQ--VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIA 778
++ V AR+SP K +V+ + G +VAVTGDG ND+PAL +ADIG+AMGI+
Sbjct: 684 DDILHYHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGIS 742
Query: 779 GTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNV 825
G++V+K++AD+I+LDDNF++IVT + GR ++ N++K + + LT N+
Sbjct: 743 GSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNI 789
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 536 bits (1382), Expect = e-177
Identities = 221/793 (27%), Positives = 350/793 (44%), Gaps = 96/793 (12%)
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
E S T G++ + + R E YG N+ + W V E D+ + IL
Sbjct: 10 TEECLAYFGVSETTGLTPDQ--VKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILL 67
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQ------SLQ-FKDLDR 233
+ A +S V+ EG V ILL++ A Q +++ K+ +
Sbjct: 68 LAACISFVLAWFEEGEETITAFVEPFV--ILLILIANAIVGVWQERNAENAIEALKEYEP 125
Query: 234 EKKKITVQVARNGFR--RKISIYDLLPGDIVHLCMGDQVPADG--LFVSGFSVLINESSL 289
E +V R + ++I D++PGDIV + +GD+VPAD L + ++ +++S L
Sbjct: 126 E----MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSIL 181
Query: 290 TGESEPV--NVNALNP----------FLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLS 337
TGES V + + L SGT + G +V T G+ T+ GK+ ++
Sbjct: 182 TGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMA 241
Query: 338 EGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEI 397
D+TPLQ KL+ + K+ V + + + G
Sbjct: 242 ATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLI---NIGH-----FNDPVHGGSWIRGA 293
Query: 398 LEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDK 457
+ +F IAV + V A+PEGLP +T LA ++M A+VR L + ET+G + ICSDK
Sbjct: 294 IYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDK 353
Query: 458 TGTLTTNHMTVLKACICEEIKEVDNSK-------------------GTPAFGSSIPASAS 498
TGTLTTN M+V K I +++ S P
Sbjct: 354 TGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDG-LV 412
Query: 499 KLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVE-- 556
+L N E +G TETA+ + R SK+ +
Sbjct: 413 ELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANAC 472
Query: 557 --------------PFNSVKKQMGVVIELPEG-----GFRVHCKGASEIILAACDKFLNS 597
F+ +K M V + G ++ KGA E ++ C+
Sbjct: 473 NSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVR-V 531
Query: 598 NGEVVPLNEAAVNHLNETIEKF--ASEALRTLCLACMEIGNEFSADAPIPTEGY------ 649
VP+ + I+++ + LR L LA + + + +
Sbjct: 532 GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETD 591
Query: 650 -TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN----G 704
T +G+VG+ DP R V S+ +CR AGI V M+TGDN TA AI R GI +N
Sbjct: 592 LTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVAD 651
Query: 705 IAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAP 764
A G EF + E + + AR P K +V++L+ + E+ A+TGDG NDAP
Sbjct: 652 RAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQ-SYDEITAMTGDGVNDAP 710
Query: 765 ALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVN 824
AL +A+IG+AMG +GT VAK ++++++ DDNFSTIV + GR++Y N+++F+++ ++ N
Sbjct: 711 ALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSN 769
Query: 825 VVALIVNFSSACL 837
V ++ F +A L
Sbjct: 770 VGEVVCIFLTAAL 782
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 482 bits (1243), Expect = e-157
Identities = 156/715 (21%), Positives = 310/715 (43%), Gaps = 83/715 (11%)
Query: 126 EKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALV 185
+ L T G+++ E + +R+ YG+N+ E F + ++ A++
Sbjct: 78 DMLQTDTRVGLTSEE--VVQRRRKYGLNQMKEEKENHFLKF-LGFFVGPIQFVMEGAAVL 134
Query: 186 SLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARN 245
+ + W D I +LL V +++ +L ++ + V R+
Sbjct: 135 AAGLE----DWV----DFGVICGLLLLNAVVGFVQEFQAGSIVDEL-KKTLALKAVVLRD 185
Query: 246 GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVL-INESSLTGESEPVNVNALNPF 304
G ++I +++PGDI+ + G +PADG V+ + L +++S+LTGES V+ + +
Sbjct: 186 GTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTGESLAVDKHKGDQ- 244
Query: 305 LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFF 364
+ + + V+ G +++T G T G+ A ++ LNG+ TI+ + +F
Sbjct: 245 VFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFT 304
Query: 365 AVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSL 424
++ + + + ++ILEF + I ++ VP GLP VT ++
Sbjct: 305 LLIVWVSSF---------------YRSNPIVQILEF---TLAITIIGVPVGLPAVVTTTM 346
Query: 425 AFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSK 484
A + KA+V+ L+A E++ +CSDKTGTLT N +++ + D
Sbjct: 347 AVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGVDPED--- 403
Query: 485 GTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQ 544
L+L + ++ + + A L+ L +
Sbjct: 404 ---------------LMLTACLAA----------SRKKKGIDAIDKAFLKS-LKYYPRAK 437
Query: 545 AERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPL 604
+ K+++ PF+ V K++ V+E P+G KGA +L + E P+
Sbjct: 438 SVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVE-------EDHPI 490
Query: 605 NEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG 664
E + +FA+ R+L +A + +GI+ DP R
Sbjct: 491 PEEVDQAYKNKVAEFATRGFRSLGVARKRGEGSW-----------EILGIMPCMDPPRHD 539
Query: 665 VKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFREKSDEELSK 722
++V ++ G++++M+TGD + A+ +R+ G+ T+ N + + E+
Sbjct: 540 TYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYD 599
Query: 723 LIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV 782
+ A P K+ +V+ L+ G +VA+TGDG NDAP+L +AD G+A+ ++
Sbjct: 600 FVEAADGFAEVFPQHKYNVVEILQ-QRGYLVAMTGDGVNDAPSLKKADTGIAVE-GSSDA 657
Query: 783 AKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACL 837
A+ +AD++ L I+ K R ++ + +V +++ +++ I +
Sbjct: 658 ARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAI 712
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 480 bits (1238), Expect = e-157
Identities = 147/712 (20%), Positives = 297/712 (41%), Gaps = 83/712 (11%)
Query: 121 VEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180
+E + ++L S +G++T E R +I+G NK E + + + ++
Sbjct: 19 IEEVFQQLKCS-REGLTTQE--GEDRIQIFGPNKLEEKK-ESKLLKFLGFMWNPLSWVME 74
Query: 181 VCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQ-FKDLDREKKKI- 238
+ A++++ + G + I+ ++ + +T + + +
Sbjct: 75 MAAIMAIALANGD-----GRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLA 129
Query: 239 -TVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVN 297
+V R+G + L+PGDIV + +GD +PAD + G + +++S+LTGES PV
Sbjct: 130 PKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTGESLPVT 189
Query: 298 VNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATI- 356
+ + SG+ + G + +V G+ T +GK A L + + Q L +
Sbjct: 190 KHPGQ-EVFSGSTCKQGEIEAVVIATGVHTFFGK-AAHLVDSTNQVGHFQKVLTAIGNFC 247
Query: 357 IGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGL 416
I I + + + + ++ + +++ +P +
Sbjct: 248 ICSIAIGMVIEIIVMYP---------------IQRRKYRDGIDN---LLVLLIGGIPIAM 289
Query: 417 PLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEE 476
P +++++A ++ A+ + + A E M +CSDKTGTLT N ++V K +
Sbjct: 290 PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVF 349
Query: 477 IKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFG 536
K V+ ++LL + ++ E + A++
Sbjct: 350 CKGVEK---------------DQVLLFAAMA-----------SRVEN-QDAIDAAMVGM- 381
Query: 537 LLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLN 596
D + R + V PFN V K+ + G + KGA E IL
Sbjct: 382 ---LADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELA----- 433
Query: 597 SNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVG 656
+ + I+K+A LR+L +A + + P + +G++
Sbjct: 434 ------KASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKES---PGAPWEFVGLLP 484
Query: 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA---IEGPEFR 713
+ DP R E++ + G+ V+M+TGD + K R G+ T+ + + +
Sbjct: 485 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDA 544
Query: 714 EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773
+ + +LI K A P K+ +VK L+ +V +TGDG NDAPAL +ADIG+
Sbjct: 545 NLASIPVEELIEKADGFAGVFPEHKYEIVKKLQER-KHIVGMTGDGVNDAPALKKADIGI 603
Query: 774 AMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNV 825
A+ T+ A+ ++D+++ + S I++ R+++ ++ + + +++ +
Sbjct: 604 AVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 654
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 164 bits (419), Expect = 7e-43
Identities = 136/587 (23%), Positives = 220/587 (37%), Gaps = 152/587 (25%)
Query: 239 TVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNV 298
T V R+G + + ++ GDIV + G+++P DG+ V G S ++ES ++GE PV
Sbjct: 134 TAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY-VDESMISGEPVPVLK 192
Query: 299 NALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIG 358
+ + + T G K+ T VG T +++ + + + P+Q + V
Sbjct: 193 SKGDE-VFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFI 251
Query: 359 KIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAI--AVTIVVVAVPEGL 416
L A+ F W + L FA + ++VVA P
Sbjct: 252 PTVLLVAISAFIY---------------WYFIAHAPLL----FAFTTLIAVLVVACPCAF 292
Query: 417 PLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEE 476
LA +L M K L+++ A E T++ DKTGTLT
Sbjct: 293 GLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLT-------------- 338
Query: 477 IKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGT---------- 526
KG P +P G++ E+L
Sbjct: 339 -------KGKPEVTDLVPL---------------------NGDERELLRLAAIAERRSEH 370
Query: 527 PTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEI 586
P AI++ +A ++ + E + + GV ++
Sbjct: 371 PIAEAIVK---------KALEHGIELGEPEKVEVIAGE-GV---------------VADG 405
Query: 587 ILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPT 646
IL + + G V N + +EK EA + +A
Sbjct: 406 ILVGNKRLMEDFGVAVS------NEVELALEKLEREAKTAVIVA---RNGRV-------- 448
Query: 647 EGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA 706
GI+ + D ++ K +V + GI V M+TGDN +A+AI+RE +
Sbjct: 449 -----EGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL------- 496
Query: 707 IEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL 766
D V+A P K VK L+ EVVA GDG NDAPAL
Sbjct: 497 ----------DL----------VIAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPAL 534
Query: 767 HEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINI 813
+AD+G+A+G +G++VA ES D++++ D+ +V + R I
Sbjct: 535 AQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 580
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 162 bits (412), Expect = 1e-41
Identities = 129/590 (21%), Positives = 220/590 (37%), Gaps = 159/590 (26%)
Query: 242 VARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL 301
+ +G ++S+ ++ GD++ + G+++P DG G S ++ES +TGE PV A
Sbjct: 230 IKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSF-VDESMVTGEPIPVAKEAS 288
Query: 302 NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIG 361
++ T Q GS M VG T +++ +S+ P+Q +A +
Sbjct: 289 AK-VIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQ----RLADTVSGW- 342
Query: 362 LFF-------AVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEF-FAIAVTIVVVAVP 413
F AV++F V W G L + AV+++++A P
Sbjct: 343 --FVPAVILVAVLSFIV---------------WALLGPQP--ALSYGLIAAVSVLIIACP 383
Query: 414 EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACI 473
L LA +S+ + K L+++ A E M ++ DKTGTLT
Sbjct: 384 CALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLT----------- 432
Query: 474 CEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGT------- 526
+G P +V + + L
Sbjct: 433 ----------EGHPKLT---------------------RIVTDDFVEDNALALAAALEHQ 461
Query: 527 ---PTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGA 583
P AI+ A+ + + VE F + G V +
Sbjct: 462 SEHPLANAIVHA---------AKEKGLSLGSVEAFEAPT------------GKGVVGQVD 500
Query: 584 SEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAP 643
+ + + +G L E ++ + + +A + +
Sbjct: 501 GHHVAIGNARLMQEHG-------GDNAPLFEKADELRGKGASVMFMA---VDGKT----- 545
Query: 644 IPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN 703
+ ++ ++DP++ E++ + +GI + M+TGD+ TA+A+A GI
Sbjct: 546 --------VALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGI---- 593
Query: 704 GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDA 763
+ V+A P DK +V L+ G +VA+ GDG NDA
Sbjct: 594 -------------KK----------VVAEIMPEDKSRIVSELKDK-GLIVAMAGDGVNDA 629
Query: 764 PALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINI 813
PAL +ADIG+AMG GT+VA ESA V +L + I + S NI
Sbjct: 630 PALAKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNI 678
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 5e-33
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 29/162 (17%)
Query: 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
I I D RP +K+ + ++ G+ + +++GD + K +++E I
Sbjct: 128 IASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNI------------ 175
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771
E + SP DK +++ L+ G V + GDG NDA AL AD+
Sbjct: 176 -----QE----------YYSNLSPEDKVRIIEKLKQN-GNKVLMIGDGVNDAAALALADV 219
Query: 772 GLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINI 813
+AMG G +++K AD+I++ ++ T++ + K + + I
Sbjct: 220 SVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAI 260
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 3e-32
Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 30/162 (18%)
Query: 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
G++ + D +RP +E+++ ++ GI M+TGDN AK +A E G+
Sbjct: 136 SGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGL------------ 183
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771
D+ A P +K VK ++ V A+ GDG NDAPAL +AD+
Sbjct: 184 -----DD----------YFAEVLPHEKAEKVKEVQQ--KYVTAMVGDGVNDAPALAQADV 226
Query: 772 GLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINI 813
G+A+G AGT+VA E+AD++++ ++ + + + R Y
Sbjct: 227 GIAIG-AGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKF 267
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 1e-30
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 30/162 (18%)
Query: 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
GI+ + D ++ K +V + GI V M+TGDN +A+AI+RE +
Sbjct: 155 EGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL------------ 202
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771
D V+A P K VK L+ EVVA GDG NDAPAL +AD+
Sbjct: 203 -----DL----------VIAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQADL 245
Query: 772 GLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINI 813
G+A+G +G++VA ES D++++ D+ +V + R I
Sbjct: 246 GIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 286
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 8e-29
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 30/162 (18%)
Query: 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711
GI+ + D ++ K +V + GI V M+TGDN +A+AI+RE +
Sbjct: 527 EGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL------------ 574
Query: 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771
D V+A P K VK L+ EVVA GDG NDAPAL +AD+
Sbjct: 575 -----DL----------VIAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQADL 617
Query: 772 GLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINI 813
G+A+G +G++VA ES D++++ D+ +V + R I
Sbjct: 618 GIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 658
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 74.1 bits (183), Expect = 1e-13
Identities = 58/230 (25%), Positives = 95/230 (41%), Gaps = 19/230 (8%)
Query: 239 TVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNV 298
T V R+G + + ++ GDIV + G+++P DG+ V G S ++ES ++GE PV
Sbjct: 212 TAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLK 270
Query: 299 NALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIG 358
+ + + T G K+ T VG T +++ + + + P+Q + V
Sbjct: 271 SKGDE-VFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFI 329
Query: 359 KIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPL 418
L A+ F W + L F + ++VVA P L
Sbjct: 330 PTVLLVAISAFIY---------------WYFIAHAPLL--FAFTTLIAVLVVACPCAFGL 372
Query: 419 AVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTV 468
A +L M K L+++ A E T++ DKTGTLT V
Sbjct: 373 ATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEV 422
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 94.6 bits (236), Expect = 1e-22
Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 7/139 (5%)
Query: 524 LGTPTETAILEFGLLLGGDFQAERQASKIVKVE--PFNSVKKQMGVVIELPEGGFRVHCK 581
L +TA+LE + A AS+ K++ PF+ +++M VV+ ++ CK
Sbjct: 32 LKNLLDTAVLEGT----DEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCK 87
Query: 582 GASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSAD 641
GA + IL C + + NGE+VPL++ + + + + LR + +A +
Sbjct: 88 GALQEILNVCSQVRH-NGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDY 146
Query: 642 APIPTEGYTCIGIVGIKDP 660
G + D
Sbjct: 147 QRADESDLILEGYIAFLDH 165
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 58.2 bits (142), Expect = 1e-10
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 239 TVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNV 298
T V R+G + + ++ GDIV + G+++P DG+ V G S ++ES ++GE PV
Sbjct: 13 TAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLK 71
Query: 299 NALNPFLLSGTKVQNGSCKMLVTTVGMRT 327
+ + + T G K+ T VG T
Sbjct: 72 SKGDE-VFGATINNTGVLKIRATRVGGET 99
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 56.7 bits (137), Expect = 4e-09
Identities = 20/144 (13%), Positives = 42/144 (29%), Gaps = 11/144 (7%)
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD---NGIAIEGPEFREKS 716
+R G +E VA I +++G + N + +
Sbjct: 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDW 136
Query: 717 DEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 776
+ K +++ L ++ + GD D A +D+ A
Sbjct: 137 PH------SCKGTCSNQCGCCKPSVIHELSEPNQYIIMI-GDSVTDVEAAKLSDLCFARD 189
Query: 777 IAGTEVAKESADVIILDDNFSTIV 800
E +++ + + D F I
Sbjct: 190 YLLNECREQNLNHLPYQD-FYEIR 212
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 53.3 bits (127), Expect = 3e-07
Identities = 72/488 (14%), Positives = 136/488 (27%), Gaps = 169/488 (34%)
Query: 211 LLVVFVTATSDYKQSLQFKDL---------DREKKKITVQVAR-NGFRRKISIYDLL--- 257
+L VF + + KD+ E I + +G R ++ L
Sbjct: 21 ILSVFE---DAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLR---LFWTLLSK 74
Query: 258 PGDIVHLCMGDQVPAD-GLFVSGFSVLINESSLTGES---------------EPVNVNAL 301
++V + + + + +S + S+ NV+ L
Sbjct: 75 QEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRL 134
Query: 302 NPFLLSGTKVQNGSCKM----LVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATII 357
P+L K++ ++ V G+ G
Sbjct: 135 QPYL----KLRQALLELRPAKNVLIDGV-------------LG----------------S 161
Query: 358 GKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSG-----DDALEILEFFAIAVTIVVVAV 412
GK V V + K+ W + LE+L+ + +
Sbjct: 162 GK-----TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSR 216
Query: 413 PEG---LPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVL 469
+ + L + S+ +++++ K L L VL
Sbjct: 217 SDHSSNIKLRIH-SIQAELRRLLKSKPYENCL-------------------L------VL 250
Query: 470 KACICEEIKEVDNSKGTPAFGSSIPASASKLLL----QSIFN----NTGGEVVIGEGNKT 521
V N+K AF S K+LL + + + T + + + T
Sbjct: 251 L--------NVQNAKAWNAFNLS-----CKILLTTRFKQVTDFLSAATTTHISLDHHSMT 297
Query: 522 EILGTPTETAILEFGLLLGGDFQAE-RQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHC 580
TP E L L Q R+ P ++ ++ E R
Sbjct: 298 L---TPDEVKSL-LLKYLDCRPQDLPREVLTT---NPR-----RLSIIAES----IRDG- 340
Query: 581 KGASEIILAACDKFLNSNGE-VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFS 639
LA D + + N + + + E+++N L + + L + F
Sbjct: 341 -------LATWDNWKHVNCDKLTTIIESSLNVLEPAEYR---KMFDRLSV--------FP 382
Query: 640 ADAPIPTE 647
A IPT
Sbjct: 383 PSAHIPTI 390
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.1 bits (116), Expect = 6e-06
Identities = 86/645 (13%), Positives = 174/645 (26%), Gaps = 202/645 (31%)
Query: 6 NENFSDVKAKNTSEEALQR--WRKLCGFVKNRKRRFRFTANLSKRFE--AEAIRRSNQEK 61
E + + R W L + ++F L ++ I+ ++
Sbjct: 48 KEEIDHIIMSKDAVSGTLRLFW-TLLSKQEEMVQKF-VEEVLRINYKFLMSPIKTEQRQP 105
Query: 62 FRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHG-- 119
+ + + + + + ++Y V + EL K + + G
Sbjct: 106 SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLEL------RPAKNVLIDGVL 159
Query: 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMIL 179
G G K T + + L+ + + K + FW+ + T++ +
Sbjct: 160 GS-G---K--TWVA-----LDVCLSYKVQ----CKM---DFKIFWLNLKNCNSPETVLEM 201
Query: 180 AVCALVSLVVGIATEGWPKGAH--------DGLGIVMSILLVVFVTATSDYKQSLQFKDL 231
L L+ I + H + + LL + Y+ L L
Sbjct: 202 ----LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL-----KSKPYENCLL--VL 250
Query: 232 D--REKKKITVQVARNGF----R-----RKISIYDLLPGDIV-HLCMGDQVP------AD 273
+ K N F + R + D L H+ +
Sbjct: 251 LNVQNAKAW------NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVK 304
Query: 274 GLFVSGFSVLINESSLTGESEPVNVNALNPFLLS--GTKVQNGSCKMLVTTVGMRTQWGK 331
L + + L P V NP LS +++G W
Sbjct: 305 SLLLK--YLDCRPQDL-----PREVLTTNPRRLSIIAESIRDGLA--------TWDNW-- 347
Query: 332 LMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKL---QEGTHWT 388
V + + TII V+ A + +F +L H
Sbjct: 348 --------------KHVNCDKLTTIIES---SLNVLEPAEY-RKMF-DRLSVFPPSAHIP 388
Query: 389 -------WSG---DDALEILEFFAIAVTIVVVAVPEGL------PLAVTL-SLAFAMK-K 430
W D + ++ L +++ S+ +K K
Sbjct: 389 TILLSLIWFDVIKSDVMVVVNKL----------HKYSLVEKQPKESTISIPSIYLELKVK 438
Query: 431 MMNDKALVRHLAACETMGSATSICSDKTGTLTTN---------HMTVLKACICEEIKEVD 481
+ N+ AL H + + + SD + H+ K ++
Sbjct: 439 LENEYAL--HRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHL-----------KNIE 485
Query: 482 NSKGTPAF-----------------GSSIPASASKL-LLQS-------IFNNTGG-EVVI 515
+ + F ++ AS S L LQ I +N E ++
Sbjct: 486 HPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLV 545
Query: 516 GE------GNKTEILGTPTETAILEFGLLLGGDF---QAERQASK 551
+ ++ + T +L L+ + +A +Q +
Sbjct: 546 NAILDFLPKIEENLICSK-YTDLLRIALMAEDEAIFEEAHKQVQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.7 bits (115), Expect = 8e-06
Identities = 66/500 (13%), Positives = 135/500 (27%), Gaps = 171/500 (34%)
Query: 45 LSKRFEAEAIRRSNQEKFRVAVLV-------SQAALQFIHGLNLSSEYTVPEEVAASGFQ 97
LSK E + I S L + +F+ + L Y + S +
Sbjct: 46 LSKE-EIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEV-LRINY----KFLMSPIK 99
Query: 98 ICPDELGSIVEGHDIKKLKVHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTE 157
+ + + ++ +++ + A K + +S + L R+ + +
Sbjct: 100 TEQRQPSMMTRMYIEQRDRLYNDNQVFA-KYN------VSRLQPYLKLRQALLEL----- 147
Query: 158 SPARGFWVYVWEALHDM-----TLMILAVCALVSLVVGIATEG---WPK-GAHDGLGIVM 208
PA+ V + + T + L VC S V + W + V+
Sbjct: 148 RPAK----NV--LIDGVLGSGKTWVALDVCL--SYKVQCKMDFKIFWLNLKNCNSPETVL 199
Query: 209 SILLVVFVTATSDYKQSLQFKDLDREKK-KITVQVARNGFRRKISIYDLLPGDIVHLCMG 267
+L + ++ D K+ + + RR +
Sbjct: 200 EMLQKLLYQIDPNWTSRS-----DHSSNIKLRIHSIQAELRRLLK--------------- 239
Query: 268 DQVPADGLFVSGFSVLINESSLTGESEPV-NVNALNPFLLSGTKVQNGSCKMLVTTVGMR 326
+ + L V L+N V N A N F N SCK+L+TT R
Sbjct: 240 SKPYENCLLV-----LLN----------VQNAKAWNAF--------NLSCKILLTT---R 273
Query: 327 TQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTH 386
+ V + T
Sbjct: 274 FK-----------------------QVTDFLSAAT---TTHISLDHHSMTLTPD------ 301
Query: 387 WTWSGDDALEILEFFAIAVTIVVVAVPE----GLPLAVTLSLAFAMKKMMNDKALVRHLA 442
E+ + +P P +++ +A +++ + +H+
Sbjct: 302 ---------EVKSLLLKYLDCRPQDLPREVLTTNPRRLSI-IAESIRDGLATWDNWKHV- 350
Query: 443 ACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV--------DNSKGTPAFGSSIP 494
C+ + + + VL+ E +++ ++ IP
Sbjct: 351 NCDKLTTIIESS-----------LNVLEP---AEYRKMFDRLSVFPPSAH--------IP 388
Query: 495 ASASKLLLQSIFNNTGGEVV 514
LL I+ + V
Sbjct: 389 TI----LLSLIWFDVIKSDV 404
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 4e-07
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 14/85 (16%)
Query: 249 RKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSG 308
++ + + GDI+ + G + P DG + G S +++ES +TGE+ PV G
Sbjct: 35 EQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITGEAMPVAKKP-------G 86
Query: 309 TKV------QNGSCKMLVTTVGMRT 327
+ V QNGS + T VG T
Sbjct: 87 STVIAGSINQNGSLLICATHVGADT 111
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 4e-06
Identities = 26/145 (17%), Positives = 46/145 (31%), Gaps = 19/145 (13%)
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
P+ G E V+ + V +G + D + ++
Sbjct: 75 PLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHL--DAAFSNT----LIVENDA 128
Query: 720 LS-KLIPKIQVMARSSPMDKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADIGLA 774
L+ + + K ++ L+ L + V GDG ND A I +A
Sbjct: 129 LNGLVTGHMMFSHS-----KGEMLLVLQRLLNISKTNTLVV-GDGANDLSMFKHAHIKIA 182
Query: 775 MGIAGTEVAKESADVIILDDNFSTI 799
EV K+ A I + + + I
Sbjct: 183 FN--AKEVLKQHATHCINEPDLALI 205
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A Length = 261 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 5e-06
Identities = 38/156 (24%), Positives = 55/156 (35%), Gaps = 33/156 (21%)
Query: 665 VKESVAICRSAGITVRMVTGDNINTAK----AIARECGILTDNGIAIEGPEF-------- 712
VK A C G+ V NI+ + L N I E
Sbjct: 90 VKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQ 149
Query: 713 -----REKSDEELSKLIPKIQVMARSSPM---------DKHTLVKHLRTTLG----EVVA 754
E+ ++E+ IP ++ R P K + + G E ++
Sbjct: 150 MTPFITEEEEKEVLPSIPTCEIG-RWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMS 208
Query: 755 VTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVI 790
GDG ND L A IG+AMG A +V K +AD +
Sbjct: 209 F-GDGGNDISMLRHAAIGVAMGQAKEDV-KAAADYV 242
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 6e-06
Identities = 26/148 (17%), Positives = 48/148 (32%), Gaps = 25/148 (16%)
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
+ PG+ + + ++ G +++G + + + D + E D
Sbjct: 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQL--DYAFSNT----VEIRDNV 232
Query: 720 LS-KLIPKIQVMARSSPMDKHTLVKHLRT-------TLGEVVAVTGDGTNDAPALHEADI 771
L+ + I M+ + L ++A GDG ND P L A
Sbjct: 233 LTDNITLPI--------MNAANKKQTLVDLAARLNIATENIIAC-GDGANDLPMLEHAGT 283
Query: 772 GLAMGIAGTEVAKESADVIILDDNFSTI 799
G+A V +E I F +
Sbjct: 284 GIAWK--AKPVVREKIHHQINYHGFELL 309
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A Length = 258 | Back alignment and structure |
|---|
Score = 46.7 bits (112), Expect = 1e-05
Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 16/90 (17%)
Query: 714 EKSDEELSKLIPKIQVMARSSPM---------DKHT----LVKHLRTTLGEVVAVTGDGT 760
+ +E + P+ + + R + K +++ L +V A GDG
Sbjct: 152 AEEEEPYVRNYPEFRFV-RWHDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDVYAF-GDGL 209
Query: 761 NDAPALHEADIGLAMGIAGTEVAKESADVI 790
ND L G+AMG A EV K AD +
Sbjct: 210 NDIEMLSFVGTGVAMGNAHEEV-KRVADFV 238
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} Length = 268 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 1e-05
Identities = 33/156 (21%), Positives = 61/156 (39%), Gaps = 33/156 (21%)
Query: 665 VKESVAICRSAGITVRMVTGDNI---NTAKAIARECGILTDNGIAIEGPE---------- 711
++S+ + R V + + + + + GI+ + E
Sbjct: 97 FRKSMELAREFDFAVALELNEGVFVNRLTPTVEQIAGIVEHPVPPVVDIEEMFERKECCQ 156
Query: 712 ----FREKSDEELSKLIPKIQVMARSSPM---------DKHT----LVKHLRTTLGEVVA 754
F E++++++ L+ + R P+ K T + R + E++A
Sbjct: 157 LCFYFDEEAEQKVMPLLSGLSAT-RWHPLFADVNVAGTSKATGLSLFADYYRVKVSEIMA 215
Query: 755 VTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVI 790
GDG ND P L A IG+AMG A +V + AD +
Sbjct: 216 C-GDGGNDIPMLKAAGIGVAMGNASEKV-QSVADFV 249
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 2e-05
Identities = 28/149 (18%), Positives = 55/149 (36%), Gaps = 27/149 (18%)
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NGIAIEGPEFREK 715
P+ P + E VA + G V + +G + + + + D N + I
Sbjct: 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSL--DYAQSNTLEIV------- 228
Query: 716 SDEELS-KLIPKIQVMARSSPMDKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEAD 770
+L+ +++ ++ V A++ K ++ L VAV GDG ND + A
Sbjct: 229 -SGKLTGQVLGEV-VSAQT----KADILLTLAQQYDVEIHNTVAV-GDGANDLVMMAAAG 281
Query: 771 IGLAMGIAGTEVAKESADVIILDDNFSTI 799
+G+A + A + +
Sbjct: 282 LGVAYH--AKPKVEAKAQTAVRFAGLGGV 308
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 6e-05
Identities = 30/149 (20%), Positives = 60/149 (40%), Gaps = 27/149 (18%)
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NGIAIEGPEFREK 715
G +E++ ++ G V +V+G I + G+ D N + ++
Sbjct: 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGL--DYAFANRLIVK------- 126
Query: 716 SDEELS-KLIPKIQVMARSSPMDKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEAD 770
D +L+ + ++ + + K +++ + G + VAV GDG ND +A
Sbjct: 127 -DGKLTGDVEGEV-LKENA----KGEILEKIAKIEGINLEDTVAV-GDGANDISMFKKAG 179
Query: 771 IGLAMGIAGTEVAKESADVIILDDNFSTI 799
+ +A + KE AD+ I + I
Sbjct: 180 LKIAFC--AKPILKEKADICIEKRDLREI 206
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 6e-05
Identities = 27/134 (20%), Positives = 53/134 (39%), Gaps = 10/134 (7%)
Query: 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSK 722
PG++E V+ + + V +++G + + +A + I N A +F + E +
Sbjct: 89 PGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANR-LKFYF--NGEYAG 145
Query: 723 LIPKIQVMARSSPMDKHTLVKHLRTTLG--EVVAVTGDGTNDAPALHEADIGLAM-GIAG 779
K ++K L+ +++ + GDG D A AD + G
Sbjct: 146 FDETQPTAESGG---KGKVIKLLKEKFHFKKIIMI-GDGATDMEACPPADAFIGFGGNVI 201
Query: 780 TEVAKESADVIILD 793
+ K++A I D
Sbjct: 202 RQQVKDNAKWYITD 215
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 1e-04
Identities = 32/150 (21%), Positives = 55/150 (36%), Gaps = 29/150 (19%)
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFREKSD 717
+ PG + ++ R G +V+G + +A E + N + I D
Sbjct: 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIV--------D 307
Query: 718 EELS-KLIPKIQVMARSSPMDKHTLVKHLRT-------TLGEVVAVTGDGTNDAPALHEA 769
L+ +++ I +D+ LR + + VAV GDG ND L A
Sbjct: 308 GTLTGRVVGPI--------IDRAGKATALREFAQRAGVPMAQTVAV-GDGANDIDMLAAA 358
Query: 770 DIGLAMGIAGTEVAKESADVIILDDNFSTI 799
+G+A +E AD + T+
Sbjct: 359 GLGIAF--NAKPALREVADASLSHPYLDTV 386
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A Length = 227 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 2e-04
Identities = 16/91 (17%), Positives = 26/91 (28%), Gaps = 15/91 (16%)
Query: 718 EELSKLIPKIQVMARSSPM---------DKHTLVKHLRTTLG----EVVAVTGDGTNDAP 764
+ + K + S DK V L+ E++ + GD ND P
Sbjct: 125 DYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVI-GDSNNDMP 183
Query: 765 ALHEADIGLAMGIAGTEVAKESADVIILDDN 795
A T+ K +D +
Sbjct: 184 MFQLPVRKACPANA-TDNIKAVSDFVSDYSY 213
|
| >2l1w_B Vacuolar calcium ATPase BCA1 peptide; calmodulin, calmodulin complex, soybean calmodulin, vacuolar ATPase, metal binding protein; NMR {Glycine max} Length = 26 | Back alignment and structure |
|---|
Score = 38.6 bits (89), Expect = 2e-04
Identities = 15/25 (60%), Positives = 16/25 (64%)
Query: 21 ALQRWRKLCGFVKNRKRRFRFTANL 45
A QRWR VKNR RRFR +NL
Sbjct: 1 ARQRWRSSVSIVKNRARRFRMISNL 25
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 Length = 268 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 2e-04
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 15/104 (14%)
Query: 705 IAIEGPEFREKSDEELSKLIPKIQVMARSSP-----MDK--------HTLVKHLRTTLGE 751
+ I+ PE ++ E LS+ + + +S P + K L + + E
Sbjct: 149 LLIDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEE 208
Query: 752 VVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795
+V GD ND EA + +AM A +V KE++D++ L +N
Sbjct: 209 IVVF-GDNENDLFMFEEAGLRVAMENAIEKV-KEASDIVTLTNN 250
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 Length = 231 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 2e-04
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 17/98 (17%)
Query: 713 REKSDEELSKLIPKI--QVMARSSPM---------DKHTLVKHLRTTLG----EVVAVTG 757
+ E + ++I ++ ++A S +K + ++ LG EV V G
Sbjct: 118 ETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHV-G 176
Query: 758 DGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795
DG ND A +A+ A + KE+AD + +
Sbjct: 177 DGENDLDAFKVVGYKVAVAQAPKIL-KENADYVTKKEY 213
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 2e-04
Identities = 26/140 (18%), Positives = 44/140 (31%), Gaps = 23/140 (16%)
Query: 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSK 722
G+KE V ++ G + + +G + + A I +N A+ E SD +
Sbjct: 85 DGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAV---ETIWNSDGSFKE 141
Query: 723 LIPKIQVMARSSPMDKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADIGLAMGIA 778
L + + G EV+A+ GDG D E IA
Sbjct: 142 LDNSNGA--------CDSKLSAFDKAKGLIDGEVIAI-GDGYTDYQLY-EKGYATK-FIA 190
Query: 779 GTEV-----AKESADVIILD 793
E + + +
Sbjct: 191 YMEHIEREKVINLSKYVARN 210
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 3e-04
Identities = 23/120 (19%), Positives = 38/120 (31%), Gaps = 30/120 (25%)
Query: 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGI--------LTDNGIAIEGPEFRE 714
G E V R V +++ ++ + R+ G D+ + G + R+
Sbjct: 72 EGAVEFVDWLR-ERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQ 130
Query: 715 KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774
K K V ++ V+A GD ND L EA G+
Sbjct: 131 KDP--------------------KRQSVIAFKSLYYRVIAA-GDSYNDTTMLSEAHAGIL 169
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 Length = 301 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 4e-04
Identities = 17/99 (17%), Positives = 31/99 (31%), Gaps = 22/99 (22%)
Query: 717 DEELSKLIPKIQ-------VMARSSPM---------DKHTLVKHLRTTLG----EVVAVT 756
E +I ++ + + DK+T + +L +V+ V
Sbjct: 188 PSESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYNISNDQVLVV- 246
Query: 757 GDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795
GD ND L A+ A K A ++ +
Sbjct: 247 GDAENDIAMLSNFKYSFAVANATDSA-KSHAKCVLPVSH 284
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} Length = 290 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 5e-04
Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 16/102 (15%)
Query: 705 IAIEGPEFREKSDEELSKLIPKIQVMARSSP-----MDK--------HTLVKHLRTTLGE 751
+ + E ++K P + V+ R + + K + L ++ +
Sbjct: 162 EVYTEHDIQHDITETITKAFPAVDVI-RVNDEKLNIVPKGVSKEAGLALVASELGLSMDD 220
Query: 752 VVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILD 793
VVA+ G +D P + A +G+AMG A E+ K AD +
Sbjct: 221 VVAI-GHQYDDLPMIELAGLGVAMGNAVPEI-KRKADWVTRS 260
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} Length = 279 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 5e-04
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 15/104 (14%)
Query: 705 IAIEGPEFREKSDEELSKLIPKIQVMARSSPM---------DK----HTLVKHLRTTLGE 751
+ ++ P+ E+ + + + +S+P K LV L T +
Sbjct: 156 MFVDYPQVIEQVKANMPQDFKDRFSVVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADD 215
Query: 752 VVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795
V+ + GD ND + A +G+AMG A EV KE+A + L +
Sbjct: 216 VMTL-GDQGNDLTMIKYAGLGVAMGNAIDEV-KEAAQAVTLTNA 257
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 840 | |||
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.95 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.94 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.93 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.93 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.92 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.88 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.83 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.53 | |
| 4aqr_D | 57 | Calcium-transporting ATPase 8, plasma membrane-TY; | 99.44 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.35 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.3 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.26 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.23 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.22 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.19 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.19 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.13 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.1 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.98 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.97 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.95 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.94 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.88 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.88 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.87 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.87 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.85 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.83 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.82 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.81 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.8 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.78 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.77 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.75 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.74 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.66 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.64 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.64 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.57 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.56 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.52 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.51 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.5 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.48 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.48 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.46 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.45 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.42 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.42 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.4 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.4 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.4 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.38 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.36 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.36 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.34 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.32 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.31 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.28 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.28 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.22 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.22 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.21 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.21 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.2 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.2 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.19 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.18 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.17 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.13 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.12 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.1 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.09 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.08 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.08 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.08 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.07 | |
| 2l1w_B | 26 | Vacuolar calcium ATPase BCA1 peptide; calmodulin, | 98.05 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.04 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 98.02 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.0 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.99 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.98 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.98 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.98 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.96 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.96 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.95 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.94 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.92 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.91 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.91 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.9 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.89 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.86 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.85 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.84 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.84 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.83 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.79 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.78 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.75 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.62 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.58 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.55 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.51 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.46 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.4 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.3 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.28 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.24 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.15 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 97.13 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.09 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 97.09 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.99 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.96 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 96.95 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 96.95 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.94 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.9 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 96.89 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 96.82 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 96.82 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.76 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.71 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 96.69 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 96.57 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 96.52 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 96.06 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 95.75 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 95.66 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 95.6 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 95.57 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 95.57 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 95.48 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 95.35 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 95.27 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 94.64 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 94.47 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 94.41 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 93.73 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 91.93 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 89.66 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 87.48 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 87.45 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 86.9 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 84.84 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 84.26 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 83.76 | |
| 3dxs_X | 74 | Copper-transporting ATPase RAN1; CXXC motif, ferre | 82.12 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 81.66 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 80.78 |
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-113 Score=1063.43 Aligned_cols=693 Identities=30% Similarity=0.435 Sum_probs=590.0
Q ss_pred hcCHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhcc-c-C
Q 003189 118 HGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIAT-E-G 195 (840)
Q Consensus 118 ~~gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~-~-~ 195 (840)
...++++++.|.+++..||++++ +.+|+++||+|.++.++.+|+|+.++++|++++.++|++++++|++++... . +
T Consensus 50 ~~~~~~~~~~l~t~~~~GLs~~e--~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~ 127 (1028)
T 2zxe_A 50 KLSLDELHNKYGTDLTRGLTNAR--AKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAATE 127 (1028)
T ss_dssp SSCHHHHHHHHTCCSSSCBCHHH--HHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred hCCHHHHHHHhCcCccCCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccc
Confidence 34688999999999999999876 999999999999999889999999999999999999999999998775432 0 1
Q ss_pred ---CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHh----HhHhhhcCceEEEEECCeEEEEeccCCCCCcEEEecCCC
Q 003189 196 ---WPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFK----DLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGD 268 (840)
Q Consensus 196 ---~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~----~l~~~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd 268 (840)
+...|++++ +++++++++++..|.|+++.+ +|.+ ..+..++|+|||++++|+++||||||||.|++||
T Consensus 128 ~~~~~~~~~~~~----~i~~vv~i~~~~~~~qe~ka~~~~~~L~~-l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd 202 (1028)
T 2zxe_A 128 DEPANDNLYLGV----VLSTVVIVTGCFSYYQEAKSSRIMDSFKN-MVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGD 202 (1028)
T ss_dssp CCCCCHHHHHHH----HHHHHHHHHHHHHHHHTCCCCCHHHHHHT-TSCSEEEEEETTEEEEEEGGGCCTTCEEEEETTC
T ss_pred cccccchHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCCeeEEEECCEEEEEEHHHCCcCCEEEECCCC
Confidence 112345544 444555666666777765543 3333 3467899999999999999999999999999999
Q ss_pred cccccEEEEeecceEEecccccCCCCccccCCCC---------CeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCC
Q 003189 269 QVPADGLFVSGFSVLINESSLTGESEPVNVNALN---------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG 339 (840)
Q Consensus 269 ~VPaDgvll~g~~l~VDES~LTGES~pv~k~~~~---------~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~ 339 (840)
+|||||+|++|++|.||||+|||||.|+.|..++ +++|+||.|.+|.++++|++||.+|.+|+|++++.++
T Consensus 203 ~IPaD~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 282 (1028)
T 2zxe_A 203 RIPADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGL 282 (1028)
T ss_dssp BCCSEEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHHS
T ss_pred EeeceEEEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHHHhccCC
Confidence 9999999999988999999999999999998653 4799999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHH
Q 003189 340 GDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLA 419 (840)
Q Consensus 340 ~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lpla 419 (840)
+.+++|+|+.+++++.++..+++++++++|++++. . + . .+...+.++++++|++||||||++
T Consensus 283 ~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~---~-----~-------~---~~~~~~~~~i~llv~~iP~~Lp~~ 344 (1028)
T 2zxe_A 283 EVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLI---L-----G-------Y---SWLEAVIFLIGIIVANVPEGLLAT 344 (1028)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---T-----T-------C---CHHHHHHHHHHHHHHHSCTTHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---c-----c-------C---cHHHHHHHHHHHHHHHcCchHHHH
Confidence 99999999999999999999998888887776431 1 0 0 245678888999999999999999
Q ss_pred HHHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHH
Q 003189 420 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASK 499 (840)
Q Consensus 420 v~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (840)
+++++++++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+..+..+.............+....
T Consensus 345 vti~l~~~~~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (1028)
T 2zxe_A 345 VTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWS 424 (1028)
T ss_dssp HHHHHHHHHHHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHH
T ss_pred HHHHHHHHHHHHhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999887655432111000000011123334
Q ss_pred HHHHHHHhcCCceEEecCCC----ceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeC---
Q 003189 500 LLLQSIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP--- 572 (840)
Q Consensus 500 ~l~~~i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~--- 572 (840)
.+....+.|+++.++.+..+ .....|+|+|.|+++++...+.+....+..+++++.+||+|.+|||+++++.+
T Consensus 425 ~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~ 504 (1028)
T 2zxe_A 425 ALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSS 504 (1028)
T ss_dssp HHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTT
T ss_pred HHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCC
Confidence 45566677776666432221 33568999999999999887667777788899999999999999999999864
Q ss_pred CCcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCC--------CCCCC
Q 003189 573 EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFS--------ADAPI 644 (840)
Q Consensus 573 ~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~--------~~~~~ 644 (840)
++++.+++|||||.|++.|+++. .+|...+++++.++.+.+.+++|+++|+||+++|||+++.+.. +....
T Consensus 505 ~~~~~~~~KGA~e~il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~ 583 (1028)
T 2zxe_A 505 ESRYLLVMKGAPERILDRCSTIL-LNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNF 583 (1028)
T ss_dssp TCCEEEEEEECHHHHHTTEEEEC-BTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCS
T ss_pred CCcEEEEEeCCcHHHHHHhhhhh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhh
Confidence 46788999999999999999864 5778889999999999999999999999999999999865311 11133
Q ss_pred CCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC---------------------
Q 003189 645 PTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--------------------- 703 (840)
Q Consensus 645 ~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~--------------------- 703 (840)
.+.+++|+|+++++||+||+++++|++|+++||+|+|+|||+..||.++|++|||..++
T Consensus 584 ~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~ 663 (1028)
T 2zxe_A 584 PTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPR 663 (1028)
T ss_dssp CCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGG
T ss_pred hhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhcccc
Confidence 47899999999999999999999999999999999999999999999999999997542
Q ss_pred ---CccccChhhhcCCHHHHhhhcCCc--eEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCC
Q 003189 704 ---GIAIEGPEFREKSDEELSKLIPKI--QVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIA 778 (840)
Q Consensus 704 ---~~~~~g~~~~~~~~~~~~~~~~~~--~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~ 778 (840)
..+++|.++..+.++++.+.+.+. .+|||++|+||..+|+.+|+. |++|+|+|||.||+|||++||||||||++
T Consensus 664 ~~~~~vi~G~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~-g~~V~~iGDG~ND~paLk~AdvGIAmg~~ 742 (1028)
T 2zxe_A 664 DAKACVVHGSDLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGIS 742 (1028)
T ss_dssp GCCEEEEEHHHHTTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHT-TCCEEEEECSGGGHHHHHHSSEEEEESSS
T ss_pred ccceEEEEcHHhhhCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhC-CCEEEEEcCCcchHHHHHhCCceEEeCCc
Confidence 246788999989998888877655 499999999999999999998 99999999999999999999999999978
Q ss_pred CcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 003189 779 GTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACL 837 (840)
Q Consensus 779 g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~~~~ 837 (840)
|++++|++||+|+++|||++|++++++||++|+||+|++.|++++|+.+++..+++.++
T Consensus 743 gtd~ak~aAD~Vl~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~ 801 (1028)
T 2zxe_A 743 GSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIG 801 (1028)
T ss_dssp CCHHHHHHCSEEETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred cCHHHHHhcCEEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988777766655
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-112 Score=1059.54 Aligned_cols=699 Identities=30% Similarity=0.413 Sum_probs=597.4
Q ss_pred HhcCHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhcc---
Q 003189 117 VHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIAT--- 193 (840)
Q Consensus 117 ~~~gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~--- 193 (840)
+...++++.+.|++++..||++++ +.+|+++||+|.++.++.+|+|+.++++|++++.++++++++++++.+...
T Consensus 54 ~~~~~~~~~~~l~~~~~~GLs~~e--a~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~ 131 (1034)
T 3ixz_A 54 HQLSVAELEQKYQTSATKGLSASL--AAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASE 131 (1034)
T ss_pred hhCCHHHHHHHhCCCcccCCCHHH--HHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHhhcc
Confidence 345789999999999999999987 999999999999999999999999999999999999999999887665321
Q ss_pred cC--CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEECCeEEEEeccCCCCCcEEEecCCCccc
Q 003189 194 EG--WPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVP 271 (840)
Q Consensus 194 ~~--~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd~VP 271 (840)
.. ....|++++.|++.+++..++..+.+++.++..++|.+. .+..++|+|||++++|+++||||||||.|++||+||
T Consensus 132 ~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l-~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VP 210 (1034)
T 3ixz_A 132 GDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNL-VPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVP 210 (1034)
T ss_pred CCCccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhcc-CCCeeEEEECCEEEEEEHHHCCCCcEEEEcCCceec
Confidence 11 123466766665555555555555555555555555553 456899999999999999999999999999999999
Q ss_pred ccEEEEeecceEEecccccCCCCccccCCC---------CCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCC
Q 003189 272 ADGLFVSGFSVLINESSLTGESEPVNVNAL---------NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDD 342 (840)
Q Consensus 272 aDgvll~g~~l~VDES~LTGES~pv~k~~~---------~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~ 342 (840)
|||+|++|+++.||||+|||||.|+.|..+ .+++|+||.|.+|.++++|++||.+|++|+|.+++...+.+
T Consensus 211 AD~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~~~~~~~ 290 (1034)
T 3ixz_A 211 ADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENE 290 (1034)
T ss_pred CCeEEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhHHHHhhcccccC
Confidence 999999999899999999999999999643 35689999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHH
Q 003189 343 ETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTL 422 (840)
Q Consensus 343 ~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l 422 (840)
+||+|+++++++.++..+++++++++|++++.. + ..+...+..++++++++||||||+++|+
T Consensus 291 ~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--------~----------~~~~~~~~~~i~l~v~~iPe~Lp~~vti 352 (1034)
T 3ixz_A 291 KTPIAIEIEHFVDIIAGLAILFGATFFIVAMCI--------G----------YTFLRAMVFFMAIVVAYVPEGLLATVTV 352 (1034)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------c----------chHHHHHHHHHHHHHheeccccHHHHHH
Confidence 999999999999999998888887777665321 0 0366788999999999999999999999
Q ss_pred HHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHH
Q 003189 423 SLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLL 502 (840)
Q Consensus 423 ~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 502 (840)
++++++++|+++|++||+++++|+||++|+||||||||||+|+|+|.++++.+..+..+...................+.
T Consensus 353 ~la~~~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 432 (1034)
T 3ixz_A 353 CLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALC 432 (1034)
T ss_pred HHHHHHHHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999887655432211110001111123334455
Q ss_pred HHHHhcCCceEEecCCC----ceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeCC---Cc
Q 003189 503 QSIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPE---GG 575 (840)
Q Consensus 503 ~~i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~---~~ 575 (840)
..+..|+++.+..+++. .....|+|+|.|+++++...+.+....+..++++..+||+|.+|+|++++...+ +.
T Consensus 433 ~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~ 512 (1034)
T 3ixz_A 433 RVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPR 512 (1034)
T ss_pred HHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEEEEecCCCCcc
Confidence 66667766665433322 345689999999999999888888888899999999999999999988876543 67
Q ss_pred EEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCC--------CCCCCCCC
Q 003189 576 FRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFS--------ADAPIPTE 647 (840)
Q Consensus 576 ~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~--------~~~~~~~~ 647 (840)
+.+++|||||.|+++|+++. .+|...|++++.++.+.+.+++|+.+|+||+++||+.++.+.. +..+..++
T Consensus 513 ~~l~~KGApe~il~~c~~~~-~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~ 591 (1034)
T 3ixz_A 513 HVLVMKGAPERVLERCSSIL-IKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTS 591 (1034)
T ss_pred EEEEEeCChHHHHHHhHHhh-cCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhhcccc
Confidence 89999999999999999876 4677889999999999999999999999999999999865311 11124578
Q ss_pred ceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC-----------------------
Q 003189 648 GYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----------------------- 704 (840)
Q Consensus 648 ~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~----------------------- 704 (840)
+++|+|+++++||+||+++++|++|+++||+|+|+|||+..||.++|+++||..++.
T Consensus 592 ~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 671 (1034)
T 3ixz_A 592 GLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDAR 671 (1034)
T ss_pred CcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccc
Confidence 999999999999999999999999999999999999999999999999999975432
Q ss_pred -ccccChhhhcCCHHHHhhhcCCc--eEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcH
Q 003189 705 -IAIEGPEFREKSDEELSKLIPKI--QVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE 781 (840)
Q Consensus 705 -~~~~g~~~~~~~~~~~~~~~~~~--~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~ 781 (840)
.+++|.++..+.++++.+.+.+. .+++|++|+||..+|+.+|+. |++|+|+|||.||+|||+.||+|||||++|+|
T Consensus 672 ~~~~~g~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~-g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d 750 (1034)
T 3ixz_A 672 ACVINGMQLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRL-GAIVAVTGDGVNDSPALKKADIGVAMGIAGSD 750 (1034)
T ss_pred eeEEecHhhhhCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHc-CCEEEEECCcHHhHHHHHHCCeeEEeCCccCH
Confidence 47789999999999888877554 499999999999999999998 99999999999999999999999999999999
Q ss_pred HHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 003189 782 VAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT 838 (840)
Q Consensus 782 ~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~~~~~ 838 (840)
++|++||+|+++|||.+|+.++++||++|+||+|+++|++++|+..+++.+++.++.
T Consensus 751 ~aK~aAD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~ 807 (1034)
T 3ixz_A 751 AAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVS 807 (1034)
T ss_pred HHHHhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999998888776653
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-110 Score=1039.19 Aligned_cols=706 Identities=31% Similarity=0.445 Sum_probs=592.1
Q ss_pred cCHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhcccCC--
Q 003189 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGW-- 196 (840)
Q Consensus 119 ~gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~-- 196 (840)
..++++++.|+++...||+.++ +++|+++||+|.++.++.+++|+.++++|++++++++++++++++++++...+.
T Consensus 8 ~~~~~~~~~l~~~~~~GLs~~e--~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~ 85 (995)
T 3ar4_A 8 KSTEECLAYFGVSETTGLTPDQ--VKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGEET 85 (995)
T ss_dssp SCHHHHHHHHTCCTTTCBCHHH--HHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGG
T ss_pred CCHHHHHHHhCCCcccCCCHHH--HHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 4688999999999999999876 999999999999999889999999999999999999999999999988764321
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEECCe--EEEEeccCCCCCcEEEecCCCcccccE
Q 003189 197 PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGF--RRKISIYDLLPGDIVHLCMGDQVPADG 274 (840)
Q Consensus 197 ~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~RdG~--~~~I~~~dLvvGDIV~l~~Gd~VPaDg 274 (840)
...|+|++.|++.+++..++..+.+++.+++.++|.+ ..+..++|+|||+ .++|+++||||||+|.|++||+|||||
T Consensus 86 ~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~-~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~ 164 (995)
T 3ar4_A 86 ITAFVEPFVILLILIANAIVGVWQERNAENAIEALKE-YEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADI 164 (995)
T ss_dssp GSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGG-GSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEE
T ss_pred hhhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHc-cCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCcccccE
Confidence 2378898887776666655666666655555666655 4566899999887 699999999999999999999999999
Q ss_pred EEEee--cceEEecccccCCCCccccCCCC------------CeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCC
Q 003189 275 LFVSG--FSVLINESSLTGESEPVNVNALN------------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGG 340 (840)
Q Consensus 275 vll~g--~~l~VDES~LTGES~pv~k~~~~------------~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~ 340 (840)
+|+++ .+|.||||+|||||.|+.|..+. +++|+||.|.+|.++++|++||.+|.+|+|++++.+++
T Consensus 165 ~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~ 244 (995)
T 3ar4_A 165 RILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATE 244 (995)
T ss_dssp EEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHTCC
T ss_pred EEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhhcCC
Confidence 99654 45899999999999999998652 68999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHH
Q 003189 341 DDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420 (840)
Q Consensus 341 ~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav 420 (840)
.+++|+|+++++++.++.++++++++++|+++...+ .....+. .....+..+|..++++++++||||||+++
T Consensus 245 ~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~~~~~ai~l~v~aiP~~Lp~~v 316 (995)
T 3ar4_A 245 QDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHF--NDPVHGG------SWIRGAIYYFKIAVALAVAAIPEGLPAVI 316 (995)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGG--GSCSSSS------CHHHHHHHHHHHHHHHHHHHSCTTHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccccccc------hHHHHHHHHHHHHHHHHHHhcCcchHHHH
Confidence 999999999999999999988877776665432211 0000010 01123456778899999999999999999
Q ss_pred HHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeee---------eecCCCCCCCCC-
Q 003189 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIK---------EVDNSKGTPAFG- 490 (840)
Q Consensus 421 ~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~---------~~~~~~~~~~~~- 490 (840)
|+++++++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+..+ ........+...
T Consensus 317 t~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 396 (995)
T 3ar4_A 317 TTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEV 396 (995)
T ss_dssp HHHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCE
T ss_pred HHHHHHHHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCcccc
Confidence 9999999999999999999999999999999999999999999999999998764221 111110001000
Q ss_pred -------CCCChhHHHHHHHHHHhcCCceEEecC-CCceeEcCChhhHHHHHHHHHcCC-Ch--H-------------HH
Q 003189 491 -------SSIPASASKLLLQSIFNNTGGEVVIGE-GNKTEILGTPTETAILEFGLLLGG-DF--Q-------------AE 546 (840)
Q Consensus 491 -------~~~~~~~~~~l~~~i~~~~~~~~~~~~-~~~~~~~g~p~e~All~~~~~~~~-~~--~-------------~~ 546 (840)
.....+....+......|+++.+..++ ++..+..|+|+|.|++.++.+.|. +. . ..
T Consensus 397 ~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~ 476 (995)
T 3ar4_A 397 LKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVI 476 (995)
T ss_dssp EETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHH
T ss_pred ccccccccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccchhhh
Confidence 000112233445566677777665432 345566899999999999988765 11 1 24
Q ss_pred hhccceEEEecCCCCCceEEEEEEeCCC-----cEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHH--
Q 003189 547 RQASKIVKVEPFNSVKKQMGVVIELPEG-----GFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKF-- 619 (840)
Q Consensus 547 ~~~~~i~~~~pF~s~~k~~~vv~~~~~~-----~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~-- 619 (840)
+..+++++.+||+|+||||+++++.+++ ++.+++||+||.|+++|+++.. ++...|++++.++.+.+.+++|
T Consensus 477 ~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~ 555 (995)
T 3ar4_A 477 RQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKILSVIKEWGT 555 (995)
T ss_dssp HHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHHHH
T ss_pred hhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhc-CCCcccCCHHHHHHHHHHHHHHHh
Confidence 5678999999999999999999987655 6899999999999999998765 3467899999999999999999
Q ss_pred HHcccceeEEEEEEcCCCCCCC-------CCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHH
Q 003189 620 ASEALRTLCLACMEIGNEFSAD-------APIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKA 692 (840)
Q Consensus 620 ~~~glr~l~~A~~~~~~~~~~~-------~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~ 692 (840)
+++|+||+++|||+++...... ....|++++|+|+++++||+||+++++|+.|+++||+++|+|||+..||.+
T Consensus 556 a~~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ 635 (995)
T 3ar4_A 556 GRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIA 635 (995)
T ss_dssp STTCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHH
T ss_pred hhccceEEEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHH
Confidence 9999999999999885432110 112367999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCccCC----CccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhh
Q 003189 693 IARECGILTDN----GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHE 768 (840)
Q Consensus 693 iA~~~Gi~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~ 768 (840)
+|+++||...+ +.+++|.++..++++++.+.+.+..+|+|++|+||.++|+.||++ |++|+|+|||.||+|||++
T Consensus 636 ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~-g~~v~~~GDG~ND~~alk~ 714 (995)
T 3ar4_A 636 ICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSY-DEITAMTGDGVNDAPALKK 714 (995)
T ss_dssp HHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTT-TCCEEEEECSGGGHHHHHH
T ss_pred HHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHC-CCEEEEEcCCchhHHHHHH
Confidence 99999997643 468899999999999999988889999999999999999999999 9999999999999999999
Q ss_pred CCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 003189 769 ADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT 838 (840)
Q Consensus 769 Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~~~~~ 838 (840)
|||||||| +|++++|++||+++++|||.+|++++++||++|+||+||++|++++|+..++..++++++.
T Consensus 715 Advgiamg-~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g 783 (995)
T 3ar4_A 715 AEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALG 783 (995)
T ss_dssp STEEEEET-TSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCeEEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999 9999999999999999999999999999999999999999999999999888877777653
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-110 Score=1007.21 Aligned_cols=628 Identities=23% Similarity=0.396 Sum_probs=541.7
Q ss_pred HHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCCCCcchh
Q 003189 124 IAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDG 203 (840)
Q Consensus 124 l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~ 203 (840)
++..|+++...||++++ +.+|+++||+|.++.++ +++|..++++|+++..++++++++++++++ .|+|+
T Consensus 76 ~~~~l~t~~~~GLs~~e--a~~r~~~~G~N~l~~~~-~~~~~~~l~~f~~~~~~ll~~aai~s~~~g--------~~~~~ 144 (920)
T 1mhs_A 76 PEDMLQTDTRVGLTSEE--VVQRRRKYGLNQMKEEK-ENHFLKFLGFFVGPIQFVMEGAAVLAAGLE--------DWVDF 144 (920)
T ss_dssp SSTTTTTCCCCCCCSHH--HHHHHHHTSSSSCCCCC-CSSHHHHTHHHHHHHHHHHHHHHHHCTTCS--------CSSHH
T ss_pred HHHHhCCCcCCCCCHHH--HHHHHHhcCCCccCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hHHHH
Confidence 45578998889999977 99999999999998554 778899999999999999999999887764 58888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEECCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecc-e
Q 003189 204 LGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS-V 282 (840)
Q Consensus 204 ~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~-l 282 (840)
+.|++.+++..++..+.+|+.++..++|.+. .+..++|+|||++++|+++||||||+|.|++||+|||||+|++|++ +
T Consensus 145 ~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l-~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~l 223 (920)
T 1mhs_A 145 GVICGLLLLNAVVGFVQEFQAGSIVDELKKT-LALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFL 223 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTC-CCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecCcee
Confidence 7777666666777777788777777777653 4568999999999999999999999999999999999999999995 8
Q ss_pred EEecccccCCCCccccCCCCCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHH
Q 003189 283 LINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGL 362 (840)
Q Consensus 283 ~VDES~LTGES~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l 362 (840)
.||||+|||||.|+.|..++ .+|+||.|.+|.++++|++||.+|++|+|.+++++++.+++|+|+.+++++.++..+.+
T Consensus 224 ~VDES~LTGES~PV~K~~gd-~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~ 302 (920)
T 1mhs_A 224 QVDQSALTGESLAVDKHKGD-QVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVI 302 (920)
T ss_dssp EEBCTTTSSCCCCEECCSSC-EECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred eeeccccCCCCcceEecCCC-eeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999876 69999999999999999999999999999999999988899999999999998887766
Q ss_pred HHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhccccccccch
Q 003189 363 FFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLA 442 (840)
Q Consensus 363 ~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~ 442 (840)
++++++|+.+ .+.+. .+..+|.++++++|++||||||+++|++++.++.+|+++|++||+++
T Consensus 303 ~~~~i~~~~~---------------~~~~~---~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~ 364 (920)
T 1mhs_A 303 FTLLIVWVSS---------------FYRSN---PIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLS 364 (920)
T ss_dssp HHHHHHHHTT---------------TTTTC---CHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTT
T ss_pred HHHHHHHHHH---------------HhcCC---cHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCeEEecCc
Confidence 6555444321 11111 35678889999999999999999999999999999999999999999
Q ss_pred hhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCcee
Q 003189 443 ACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTE 522 (840)
Q Consensus 443 a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~ 522 (840)
++|+||++|+||||||||||+|+|+|.+++..+.. .+++ ++ ...+.|+... ..
T Consensus 365 aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g~---------------~~~~---ll-~~a~l~~~~~----~~---- 417 (920)
T 1mhs_A 365 AIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGV---------------DPED---LM-LTACLAASRK----KK---- 417 (920)
T ss_dssp THHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSCC---------------CCTH---HH-HHHHHSCCCS----SC----
T ss_pred hhhhhccCcEEEECCCCCccccceeEEEEeecCCC---------------CHHH---HH-HHHHHhcCCc----cc----
Confidence 99999999999999999999999999887653211 0111 22 2334443321 00
Q ss_pred EcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCcee
Q 003189 523 ILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVV 602 (840)
Q Consensus 523 ~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~ 602 (840)
.+||+|.|+++++.+.+.. ......+++++.+||+|.+|+|+++++.++++..+++||+||.++++|+. ..
T Consensus 418 -~~~P~e~Al~~~~~~~~~~-~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~-------~~ 488 (920)
T 1mhs_A 418 -GIDAIDKAFLKSLKYYPRA-KSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEE-------DH 488 (920)
T ss_dssp -SCCSHHHHHHHHHHHSSSC-CGGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCC-------SS
T ss_pred -CCChHHHHHHHHHHhcccc-hhhccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccc-------cC
Confidence 2499999999998776532 22345688999999999999999999876777888999999999999974 23
Q ss_pred eCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEE
Q 003189 603 PLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMV 682 (840)
Q Consensus 603 ~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~ 682 (840)
+++++.++.+.+.+++|+++|+|++++||+. .+.+++|+|+++++||+||+++++|++|+++||+|+|+
T Consensus 489 ~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~-----------~e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~Mi 557 (920)
T 1mhs_A 489 PIPEEVDQAYKNKVAEFATRGFRSLGVARKR-----------GEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKML 557 (920)
T ss_dssp CCCHHHHHHHHHHHHHHHTSSCCCCEECCCS-----------SSCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEEEec-----------cccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEE
Confidence 5778888889999999999999999999862 14678999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCcc----CCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcC
Q 003189 683 TGDNINTAKAIARECGILT----DNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGD 758 (840)
Q Consensus 683 TGD~~~ta~~iA~~~Gi~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GD 758 (840)
|||++.||.+||+++||.. .+..+++|. ..++++++.+.+.+..||||++|+||.++|+.||++ |++|+|+||
T Consensus 558 TGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~--~~~~~~el~~~~~~~~V~arv~P~~K~~iV~~Lq~~-g~~Vam~GD 634 (920)
T 1mhs_A 558 TGDAVGIARETSRQLGLGTNIYNAERLGLGGG--GDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQR-GYLVAMTGD 634 (920)
T ss_dssp ESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC--CCGGGGGGGTTTTTTSCEESCCSTHHHHHHHHHHTT-TCCCEECCC
T ss_pred cCCCHHHHHHHHHHcCCCccccCccceeecCc--ccCCHHHHHHHHhhCeEEEEeCHHHHHHHHHHHHhC-CCeEEEEcC
Confidence 9999999999999999963 234566776 567788888899999999999999999999999998 999999999
Q ss_pred CccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 759 GTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS 833 (840)
Q Consensus 759 G~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~ 833 (840)
|.||+|||++|||||||| +|++++|++||+|+++|||++|++++++||++|+||+|+++|+++.|+....+.++
T Consensus 635 GvNDapaLk~AdvGIAmg-~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~ 708 (920)
T 1mhs_A 635 GVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGL 708 (920)
T ss_dssp CGGGHHHHHHSSEEEEET-TSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHhCCcCcccc-cccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 89999999999999999999999999999999999999999999999986444433
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-109 Score=1003.62 Aligned_cols=636 Identities=23% Similarity=0.369 Sum_probs=520.5
Q ss_pred CHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCCCC
Q 003189 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKG 199 (840)
Q Consensus 120 gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~ 199 (840)
.++.+.+.|+++ ..||++++ +++|++.||+|+++.++ +++|+.++++|++++.++|+++++++++++... +.+..
T Consensus 18 ~~~~~~~~l~~~-~~GLs~~e--~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~~-~~~~~ 92 (885)
T 3b8c_A 18 PIEEVFQQLKCS-REGLTTQE--GEDRIQIFGPNKLEEKK-ESKLLKFLGFMWNPLSWVMEMAAIMAIALANGD-GRPPD 92 (885)
T ss_dssp STTCCTTTSSSC-SSCSTHHH--HHHHSSSCCSCCTTTTC-CCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCCT-TSCSC
T ss_pred CHHHHHHHhCCC-CCCCCHHH--HHHHHHhcCCCccCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccccc
Confidence 355566677887 68999876 99999999999998776 778888999999999999999999998887432 34457
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEECCeEEEEeccCCCCCcEEEecCCCcccccEEEEee
Q 003189 200 AHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSG 279 (840)
Q Consensus 200 ~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g 279 (840)
|+|++.|++.+++..++..+.+++.++..++|.+ ..+..++|+|||++++|+++||||||+|.|++||+|||||+|++|
T Consensus 93 ~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~-~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g 171 (885)
T 3b8c_A 93 WQDFVGIICLLVINSTISFIEENNAGNAAAALMA-GLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEG 171 (885)
T ss_dssp CTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTT-SCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeceEEEEc
Confidence 9998766655444444444444444444555544 345688999999999999999999999999999999999999999
Q ss_pred cceEEecccccCCCCccccCCCCCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCCCChHHHHHHHHHHHHHH
Q 003189 280 FSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 359 (840)
Q Consensus 280 ~~l~VDES~LTGES~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~ 359 (840)
++|.||||+|||||.|+.|..++ .+|+||.|.+|.++++|++||.+|++|+|.+++++ ..+++|+|+.+++++.++..
T Consensus 172 ~~l~VdES~LTGES~Pv~K~~g~-~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~-~~~~~~lq~~~~~i~~~~~~ 249 (885)
T 3b8c_A 172 DPLKVDQSALTGESLPVTKHPGQ-EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTAIGNFCIC 249 (885)
T ss_dssp SCBCCCCCSTTCCSSCCCBSSCC-CCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCS-CSCCSTTTTTTHHHHHHHHH
T ss_pred CcccccccccCCCCcceEecCCC-ccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhc-ccccChHHHHHHHHHHHHHH
Confidence 98899999999999999999876 59999999999999999999999999999998877 56789999999999887433
Q ss_pred -HHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhcccccc
Q 003189 360 -IGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALV 438 (840)
Q Consensus 360 -~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilv 438 (840)
+++.+++++++++. . .+. .+...+..++++++++||||||+++++++++++++|+++|++|
T Consensus 250 ~~~~~~~~~~~~~~~----~----~~~----------~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilv 311 (885)
T 3b8c_A 250 SIAIGMVIEIIVMYP----I----QRR----------KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 311 (885)
T ss_dssp HHHHHHHHHSTTTTT----T----TCS----------CSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCC
T ss_pred HHHHHHHHHHHHHHH----H----ccC----------cHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCeEe
Confidence 22222222222110 0 000 1224577899999999999999999999999999999999999
Q ss_pred ccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCC
Q 003189 439 RHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEG 518 (840)
Q Consensus 439 r~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 518 (840)
|+++++|+||++|+||||||||||+|+|+|.+.+.. .+ ....++ .+++..+.+++ ..
T Consensus 312 k~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~-----------~~~~~~--~~ll~~aa~~~-~~------- 368 (885)
T 3b8c_A 312 KRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VF-----------CKGVEK--DQVLLFAAMAS-RV------- 368 (885)
T ss_dssp SSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SS-----------CSSTTH--HHHHHHHHHHC-CS-------
T ss_pred CCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEe--cc-----------CCCCCH--HHHHHHHHHHh-CC-------
Confidence 999999999999999999999999999999642210 00 001111 22333333332 21
Q ss_pred CceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccC
Q 003189 519 NKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSN 598 (840)
Q Consensus 519 ~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~ 598 (840)
.++||+|.|+++++.+ ....+..+++++.+||+|.+|+|+++++..+++...++||+||.+++.|+.
T Consensus 369 ----~~~~p~~~Al~~~~~~----~~~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~----- 435 (885)
T 3b8c_A 369 ----ENQDAIDAAMVGMLAD----PKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKA----- 435 (885)
T ss_dssp ----SSCCSHHHHHHHTTCC----TTCCCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCC-----
T ss_pred ----CCCCchHHHHHHHhhc----hhhHhhcCceeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhccC-----
Confidence 1579999999987642 112334577888999999999999988765677778999999999999963
Q ss_pred CceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCE
Q 003189 599 GEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGIT 678 (840)
Q Consensus 599 g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~ 678 (840)
+++.++.+.+.+++|+++|+|++++||++++.+. .+..+++++|+|+++++||+||+++++|++|+++||+
T Consensus 436 ------~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~---~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~ 506 (885)
T 3b8c_A 436 ------SNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKT---KESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVN 506 (885)
T ss_dssp ------CSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSS---SSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCC
T ss_pred ------chhhHHHHHHHHHHHHhCCCeEEEEEEecccccc---ccccccCcEEEEEEEeecccchhHHHHHHHHHHcCCc
Confidence 1122335677889999999999999999876532 2345678999999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHcCCccC--CCccccChhhhc-CCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEE
Q 003189 679 VRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFRE-KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAV 755 (840)
Q Consensus 679 v~m~TGD~~~ta~~iA~~~Gi~~~--~~~~~~g~~~~~-~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~ 755 (840)
|+|+|||+..||.++|+++||..+ ...+++|.+++. ++++++.+.+.+..||+|++|+||.++|+.||++ |++|+|
T Consensus 507 v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~~K~~iV~~lq~~-g~~Vam 585 (885)
T 3b8c_A 507 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQER-KHIVGM 585 (885)
T ss_dssp CEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCHHHHHHHHHHHHHT-TCCCCB
T ss_pred EEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECHHHHHHHHHHHHHC-CCeEEE
Confidence 999999999999999999999642 235677887776 6666777778888899999999999999999998 999999
Q ss_pred EcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 756 TGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVAL 828 (840)
Q Consensus 756 ~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l 828 (840)
+|||.||+|||++|||||||| +|+++||++||+|+++|||++|++++++||++|+||+||+.|++++|+..+
T Consensus 586 ~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~~~i~~~l~~n~~~~ 657 (885)
T 3b8c_A 586 TGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 657 (885)
T ss_dssp CCCSSTTHHHHHHSSSCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHHHHHHHHHHHTTTTT
T ss_pred EcCCchhHHHHHhCCEeEEeC-CccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 899999999999999999999999999999999999999999999998643
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-88 Score=808.29 Aligned_cols=545 Identities=25% Similarity=0.359 Sum_probs=453.7
Q ss_pred CCccHHHHHHHHHhhhHHHHHHHHHH---HHHH---hhhc-----c------cCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 003189 159 PARGFWVYVWEALHDMTLMILAVCAL---VSLV---VGIA-----T------EGWPKGAHDGLGIVMSILLVVFVTATSD 221 (840)
Q Consensus 159 ~~~~f~~~~~~~l~~~~~~il~i~a~---is~~---~~~~-----~------~~~~~~~~d~~~i~~~illv~~v~~~~~ 221 (840)
.+++||+..|+++++....|..+.++ .+++ +.+. . .+..+.|||+++++++++++ ++
T Consensus 129 ~g~~f~~~a~~~l~~~~~~md~Lv~l~~~~a~~~S~~~~~~~~~~~~~~~~~~~~~~~yfe~a~~ii~~~ll------g~ 202 (736)
T 3rfu_A 129 GGWPFFKRGWQSLKTGQLNMFTLIAMGIGVAWIYSMVAVLWPGVFPHAFRSQEGVVAVYFEAAAVITTLVLL------GQ 202 (736)
T ss_dssp TTHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHCGGGSCSSSSCSSSCCCCCHHHHHHHHHHHHH------HH
T ss_pred hhHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcccccccccccccCccccHHHHHHHHHHHHHH------HH
Confidence 68999999999998876544222111 1111 1111 1 12245799988766555443 67
Q ss_pred HHHHHHHhHhH----h--hhcCceEEEEE-CCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecccccCCCC
Q 003189 222 YKQSLQFKDLD----R--EKKKITVQVAR-NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESE 294 (840)
Q Consensus 222 ~~~~~~~~~l~----~--~~~~~~v~V~R-dG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~ 294 (840)
|.+.++.++.. + .+.+..++|+| ||++++|+++||+|||+|.|++||+|||||+|++|++ .||||+|||||.
T Consensus 203 ~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~-~VDES~LTGES~ 281 (736)
T 3rfu_A 203 VLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRS-FVDESMVTGEPI 281 (736)
T ss_dssp HHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECSSCE-EEECSSSTTCSS
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEEECce-EeeecccCCccc
Confidence 77776654322 2 23466888887 9999999999999999999999999999999999985 999999999999
Q ss_pred ccccCCCCCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 295 PVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQ 374 (840)
Q Consensus 295 pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~ 374 (840)
|+.|..++. +++||.+.+|.++++|+++|.+|.+|+|++++.+++..++|+|+.+|+++.+++++.+++++++|++|+.
T Consensus 282 Pv~K~~gd~-v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~ 360 (736)
T 3rfu_A 282 PVAKEASAK-VIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWAL 360 (736)
T ss_dssp CEEECTTCE-ECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEeccCCc-CCCceEeccceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998775 9999999999999999999999999999999999999999999999999999999999999999988753
Q ss_pred hHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEE
Q 003189 375 GLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSIC 454 (840)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~ 454 (840)
.. .. . .+...+..++++++++|||+||+++|+++..++.+++++|+++|+++++|+||++|+||
T Consensus 361 ~~-------~~-~--------~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i~ 424 (736)
T 3rfu_A 361 LG-------PQ-P--------ALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLV 424 (736)
T ss_dssp HC-------SS-S--------STTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEEE
T ss_pred hC-------CC-c--------hHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEEE
Confidence 21 00 0 13356888999999999999999999999999999999999999999999999999999
Q ss_pred ecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceeEcCChhhHHHHH
Q 003189 455 SDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILE 534 (840)
Q Consensus 455 ~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~ 534 (840)
||||||||+|+|+|.+++..+.. .++.+.+ +.... ..+.||+++|+++
T Consensus 425 fDKTGTLT~g~~~v~~i~~~~~~----------------~~~~l~~---aa~le-------------~~s~hPla~Aiv~ 472 (736)
T 3rfu_A 425 VDKTGTLTEGHPKLTRIVTDDFV----------------EDNALAL---AAALE-------------HQSEHPLANAIVH 472 (736)
T ss_dssp ECCBTTTBCSSCEEEEEEESSSC----------------HHHHHHH---HHHHH-------------HSSCCHHHHHHHH
T ss_pred EeCCCCCcCCceEEEEEEecCCC----------------HHHHHHH---HHHHh-------------hcCCChHHHHHHH
Confidence 99999999999999998732210 1122222 11111 1267999999999
Q ss_pred HHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHH
Q 003189 535 FGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNE 614 (840)
Q Consensus 535 ~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~ 614 (840)
++...+... ....+|++..++. +....++.. +.+|+++.+...+.. ...+.+
T Consensus 473 ~a~~~~~~~---------~~~~~f~~~~g~g-v~~~~~g~~---~~~G~~~~~~~~~~~---------------~~~~~~ 524 (736)
T 3rfu_A 473 AAKEKGLSL---------GSVEAFEAPTGKG-VVGQVDGHH---VAIGNARLMQEHGGD---------------NAPLFE 524 (736)
T ss_dssp HHHTTCCCC---------CCCSCCCCCTTTE-EEECSSSSC---EEEESHHHHHHHCCC---------------CHHHHH
T ss_pred HHHhcCCCc---------cCcccccccCCce-EEEEECCEE---EEEcCHHHHHHcCCC---------------hhHHHH
Confidence 998766543 2345788777653 333443433 345998877654321 123556
Q ss_pred HHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHH
Q 003189 615 TIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA 694 (840)
Q Consensus 615 ~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA 694 (840)
..++++.+|+|++++|+ +.+++|+++++|++||+++++|++|+++|++++|+|||+..+|.++|
T Consensus 525 ~~~~~~~~G~~vl~va~----------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia 588 (736)
T 3rfu_A 525 KADELRGKGASVMFMAV----------------DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVA 588 (736)
T ss_dssp HHHHHHHTTCEEEEEEE----------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHH
T ss_pred HHHHHHhcCCeEEEEEE----------------CCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHH
Confidence 77889999999999984 56899999999999999999999999999999999999999999999
Q ss_pred HHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEE
Q 003189 695 RECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (840)
Q Consensus 695 ~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgia 774 (840)
+++||.. ++++++|+||..+|+.||++ |+.|+|+|||.||+|||++||||||
T Consensus 589 ~~lgi~~---------------------------v~a~~~P~~K~~~v~~l~~~-g~~V~~vGDG~ND~paL~~AdvGIA 640 (736)
T 3rfu_A 589 GTLGIKK---------------------------VVAEIMPEDKSRIVSELKDK-GLIVAMAGDGVNDAPALAKADIGIA 640 (736)
T ss_dssp HHHTCCC---------------------------EECSCCHHHHHHHHHHHHHH-SCCEEEEECSSTTHHHHHHSSEEEE
T ss_pred HHcCCCE---------------------------EEEecCHHHHHHHHHHHHhc-CCEEEEEECChHhHHHHHhCCEEEE
Confidence 9999975 99999999999999999999 9999999999999999999999999
Q ss_pred ecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 775 MGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF 832 (840)
Q Consensus 775 mg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~ 832 (840)
|| +|+|+++++||+|+++||+..|++++++||++++||+||+.|++.||+++++++.
T Consensus 641 mg-~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~~~iplAa 697 (736)
T 3rfu_A 641 MG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNVLGVPLAA 697 (736)
T ss_dssp ES-SSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eC-CccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99 8999999999999999999999999999999999999999999999999999975
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-89 Score=819.86 Aligned_cols=644 Identities=24% Similarity=0.290 Sum_probs=499.3
Q ss_pred hhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChhhhhhhhccCChhHHHHhcCH
Q 003189 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGV 121 (840)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~gv 121 (840)
+..|..+.|+.+.+.+++.+++||+.+.++.+.|++. ..+..++.+++++.||.+.+.+.....+.++.+.+.+...+
T Consensus 13 Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~--~~~~~~i~~ai~~~Gy~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (723)
T 3j09_A 13 CAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEK--RIDFETIKRVIEDLGYGVVDEQAAVSAEVEHLSRMKRKLYV 90 (723)
T ss_dssp SHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTT--TCCHHHHHHHHHHHCCEESSCCCCCCCCCCCCCCSCCCSSS
T ss_pred chHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCC--cCCHHHHHHHHHhcCCcccccccccchhhHHHHHHHHHHHH
Confidence 3467788899999999999999999999999999665 45667888889999999876543221111222222222223
Q ss_pred HHHHH----HhCCCcCCCCCccHHHHHHHHHhcCCCCCCCC----CCccHHHHHHHHHhhhHHHH------HHHHHHHHH
Q 003189 122 EGIAE----KLSTSITDGISTSEHLLNRRKEIYGINKFTES----PARGFWVYVWEALHDMTLMI------LAVCALVSL 187 (840)
Q Consensus 122 ~~l~~----~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~----~~~~f~~~~~~~l~~~~~~i------l~i~a~is~ 187 (840)
+++.. .+.. .|..+. ..|....+..| .+.+|++..|+++++....+ ...++++..
T Consensus 91 ~~~~~~~~~~~~~---~~~~~~--------~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~~~~md~l~~l~~~~a~~~s 159 (723)
T 3j09_A 91 AAFAGVLLLFLAH---FISLPY--------EDFVQLLIALPAIFYSGSSIFKAAFSALRRRTLNMDVMYSMGVGAAFLAS 159 (723)
T ss_dssp TTTTHHHHHHHTT---SSCSSS--------SCCSCCSTHHHHHHHHHHHHHHHTCCTTTTCSTTSCSSCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHH---Hhccch--------HHHHHHHHHHHHHHHhHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH
Confidence 32221 1111 111110 01111111111 46778888888887765442 222233222
Q ss_pred Hhhhcc-cCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHh----Hh--hhcCceEEEEECCeEEEEeccCCCCCc
Q 003189 188 VVGIAT-EGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDL----DR--EKKKITVQVARNGFRRKISIYDLLPGD 260 (840)
Q Consensus 188 ~~~~~~-~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l----~~--~~~~~~v~V~RdG~~~~I~~~dLvvGD 260 (840)
++.+.. .+....|||+.+++++++++ ++|.+.++.++. ++ ...+..++|+|||++++|+++||+|||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~i~~~~~i------g~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GD 233 (723)
T 3j09_A 160 VLSTAGVLPREYSFYETSVLLLAFLLL------GRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGD 233 (723)
T ss_dssp HHHHHTTTTCCCCCCTTHHHHHHHHHH------HHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTC
T ss_pred HHHHHhhcccchhHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCC
Confidence 222211 11122388887766555443 677776665432 22 245678999999999999999999999
Q ss_pred EEEecCCCcccccEEEEeecceEEecccccCCCCccccCCCCCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCC
Q 003189 261 IVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGG 340 (840)
Q Consensus 261 IV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~ 340 (840)
+|.|++||+|||||+|++|++ .||||+|||||.|+.|..++. +|+||.+.+|.++++|+++|.+|.+|+|++++.+++
T Consensus 234 iv~v~~Ge~IPaDg~vl~G~~-~VdeS~LTGES~pv~K~~g~~-v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~ 311 (723)
T 3j09_A 234 IVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKGDE-VFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAM 311 (723)
T ss_dssp EEEECTTCBCCSEEEEEECCE-EEECHHHHCCSSCEEECTTCE-ECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSC
T ss_pred EEEECCCCEEeeEEEEEECCe-EEecccccCCCcceeecCCCe-eccceEEecCcEEEEEEEecCccHHHHHHHHHHHhh
Confidence 999999999999999999975 999999999999999998774 999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHH
Q 003189 341 DDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420 (840)
Q Consensus 341 ~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav 420 (840)
.+++|+|+.+|+++.++.++.+++++++|++|... .+. ++...+..++++++++|||+||+++
T Consensus 312 ~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~-------~~~----------~~~~~~~~~i~vlvia~P~aL~la~ 374 (723)
T 3j09_A 312 GSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFI-------AHA----------PLLFAFTTLIAVLVVACPCAFGLAT 374 (723)
T ss_dssp CSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSS-------TTC----------TTCCSHHHHHHHHHHHSCTTHHHHH
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCC----------cHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 99999999999999999999998888887764311 000 1223577889999999999999999
Q ss_pred HHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHH
Q 003189 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKL 500 (840)
Q Consensus 421 ~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (840)
|+++..++.+++++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+.. .++.+.+
T Consensus 375 p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~----------------~~~~l~~ 438 (723)
T 3j09_A 375 PTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD----------------ERELLRL 438 (723)
T ss_dssp HHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSSC----------------HHHHHHH
T ss_pred HHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeCCCC----------------HHHHHHH
Confidence 999999999999999999999999999999999999999999999999999875321 1122222
Q ss_pred HHHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeCCCcE--EE
Q 003189 501 LLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGF--RV 578 (840)
Q Consensus 501 l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~--~~ 578 (840)
+..... .+.||++.|+++++...+...... .+|.+. ++.+. ..
T Consensus 439 ---aa~~e~-------------~s~hP~~~Ai~~~a~~~~~~~~~~---------~~~~~~----------~g~g~~~~~ 483 (723)
T 3j09_A 439 ---AAIAER-------------RSEHPIAEAIVKKALEHGIELGEP---------EKVEVI----------AGEGVVADG 483 (723)
T ss_dssp ---HHHHHT-------------TCCSHHHHHHHHHHHHTTCCCCSC---------CCCEEE----------TTTEEEETT
T ss_pred ---HHHHhc-------------cCCCchhHHHHHHHHhcCCCcCCc---------cceEEe----------cCCceEEEE
Confidence 222211 167999999999998877543211 112111 12221 12
Q ss_pred EEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeeccc
Q 003189 579 HCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIK 658 (840)
Q Consensus 579 ~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~ 658 (840)
+..|+++.+.+... +.. +.+.+..++++.+|+|++++|+ +++++|+++++
T Consensus 484 ~~~g~~~~~~~~~~----------~~~----~~~~~~~~~~~~~g~~~~~va~----------------~~~~~G~i~i~ 533 (723)
T 3j09_A 484 ILVGNKRLMEDFGV----------AVS----NEVELALEKLEREAKTAVIVAR----------------NGRVEGIIAVS 533 (723)
T ss_dssp EEEECHHHHHHTTC----------CCC----HHHHHHHHHHHTTTCEEEEEEE----------------TTEEEEEEEEE
T ss_pred EEECCHHHHHhcCC----------Ccc----HHHHHHHHHHHhcCCeEEEEEE----------------CCEEEEEEeec
Confidence 45688776543221 111 2466778889999999999984 57899999999
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
|++||+++++|+.|+++|++++|+|||+..+|.++|+++||.. ++++++|+||
T Consensus 534 D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~---------------------------~~~~~~P~~K 586 (723)
T 3j09_A 534 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------VIAEVLPHQK 586 (723)
T ss_dssp CCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------------EECSCCTTCH
T ss_pred CCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcE---------------------------EEccCCHHHH
Confidence 9999999999999999999999999999999999999999974 9999999999
Q ss_pred HHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHH
Q 003189 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQ 818 (840)
Q Consensus 739 ~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~ 818 (840)
..+|+.||++ +.|+|+|||.||+|||+.|||||||| +|+++++++||+|+++||+..|++++++||++|+||+||+.
T Consensus 587 ~~~v~~l~~~--~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~ 663 (723)
T 3j09_A 587 SEEVKKLQAK--EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIF 663 (723)
T ss_dssp HHHHHHHTTT--CCEEEEECSSTTHHHHHHSSEEEECC-CCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcC--CeEEEEECChhhHHHHhhCCEEEEeC-CCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999976 78999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 003189 819 FQLTVNVVALIVNFSS 834 (840)
Q Consensus 819 f~l~~N~~~l~~~~~~ 834 (840)
|+++||++++++++.+
T Consensus 664 ~a~~~n~~~i~~a~~~ 679 (723)
T 3j09_A 664 WALIYNVILIPAAAGL 679 (723)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998755
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-85 Score=772.27 Aligned_cols=540 Identities=25% Similarity=0.334 Sum_probs=439.6
Q ss_pred CCccHHHHHHHHHhhhHHHH------HHHHHHHHHHhhhcc-cCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Q 003189 159 PARGFWVYVWEALHDMTLMI------LAVCALVSLVVGIAT-EGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDL 231 (840)
Q Consensus 159 ~~~~f~~~~~~~l~~~~~~i------l~i~a~is~~~~~~~-~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l 231 (840)
.+.+|++.+|+++++....+ ...++++..++.+.. .+..+.|||+.++++.++++ ++|.+.++.++.
T Consensus 47 ~g~~~~~~a~~~l~~~~~~md~L~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~i~~~~~i------g~~le~~~~~~~ 120 (645)
T 3j08_A 47 SGSSIFKAAFSALRRRTLNMDVMYSMGVGAAFLASVLSTAGVLPREYSFYETSVLLLAFLLL------GRTLEARAKSRT 120 (645)
T ss_dssp HHHHHHHHTCCTTTTCSGGGCCCCSCHHHHHHHHHHHHHHHHCCSCSSCCCSHHHHHHHHHH------HHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHH------HHHHHHHHHHHH
Confidence 46778888888887765543 122222222111111 11223488887766655543 677777765432
Q ss_pred ----Hh--hhcCceEEEEECCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecccccCCCCccccCCCCCeE
Q 003189 232 ----DR--EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFL 305 (840)
Q Consensus 232 ----~~--~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv~k~~~~~~l 305 (840)
++ ...+..++|+|||++++|+++||+|||+|.|++||+|||||++++|++ .||||+|||||.|+.|.+++. +
T Consensus 121 ~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~-~VdeS~LTGES~Pv~K~~g~~-v 198 (645)
T 3j08_A 121 GEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKGDE-V 198 (645)
T ss_dssp CCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCE-EEECHHHHCCSSCEEECTTCE-E
T ss_pred HHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECcE-EEEcccccCCCCceecCCCCE-e
Confidence 22 245678999999999999999999999999999999999999999975 999999999999999998774 9
Q ss_pred EeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCC
Q 003189 306 LSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGT 385 (840)
Q Consensus 306 ~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~ 385 (840)
|+||.+.+|.++++|+++|.+|.+|+|++++++++.+++|+|+.+|+++.++.++.+++++++|++|... .+.
T Consensus 199 ~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~-------~~~ 271 (645)
T 3j08_A 199 FGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFI-------AHA 271 (645)
T ss_dssp CTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCC-------CSC
T ss_pred eccEEEecCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCC
Confidence 9999999999999999999999999999999999999999999999999999999999888888764311 000
Q ss_pred ccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCc
Q 003189 386 HWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNH 465 (840)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~ 465 (840)
++...+..++++++++|||+||+++|+++..++.+++++|+++|+++++|+||++|+||||||||||+|+
T Consensus 272 ----------~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~ 341 (645)
T 3j08_A 272 ----------PLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGK 341 (645)
T ss_dssp ----------SCCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSC
T ss_pred ----------cHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcCcccccCCC
Confidence 1123456789999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHcCCChHH
Q 003189 466 MTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQA 545 (840)
Q Consensus 466 m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~ 545 (840)
|+|.+++..+.. .++.+.+ +..... .+.||++.|+++++...+.+...
T Consensus 342 ~~v~~~~~~~~~----------------~~~~l~~---aa~~e~-------------~s~hPla~Aiv~~a~~~g~~~~~ 389 (645)
T 3j08_A 342 PEVTDLVPLNGD----------------ERELLRL---AAIAER-------------RSEHPIAEAIVKKALEHGIELGE 389 (645)
T ss_dssp CEEEEEEESSSC----------------HHHHHHH---HHHHHT-------------TCCSHHHHHHHHHHHHTTCCCCS
T ss_pred eEEEEEEeCCCC----------------HHHHHHH---HHHHhh-------------cCCChhHHHHHHHHHhcCCCcCC
Confidence 999998875321 1122222 222211 16799999999999887764321
Q ss_pred HhhccceEEEecCCCCCceEEEEEEeCCCcEE--EEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcc
Q 003189 546 ERQASKIVKVEPFNSVKKQMGVVIELPEGGFR--VHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEA 623 (840)
Q Consensus 546 ~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~--~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~g 623 (840)
. .+|.+. ++.+.. .+..|+++.+.+... +.. +.+.+..++++.+|
T Consensus 390 ~---------~~~~~~----------~g~g~~~~~v~~g~~~~~~~~~~----------~~~----~~~~~~~~~~~~~g 436 (645)
T 3j08_A 390 P---------EKVEVI----------AGEGVVADGILVGNKRLMEDFGV----------AVS----NEVELALEKLEREA 436 (645)
T ss_dssp C---------CCCEEE----------TTTEEEETTEEEECHHHHHHTTC----------CCC----HHHHHHHHHHHTTT
T ss_pred c---------cceEEe----------cCCceEEEEEEECCHHHHHhcCC----------Ccc----HHHHHHHHHHHhcC
Confidence 1 112111 122211 245688766543221 111 24567778899999
Q ss_pred cceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC
Q 003189 624 LRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN 703 (840)
Q Consensus 624 lr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~ 703 (840)
+|++++|+ +++++|+++++|++||+++++|++|+++|++++|+|||+..+|.++|+++||..
T Consensus 437 ~~~l~va~----------------~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~-- 498 (645)
T 3j08_A 437 KTAVIVAR----------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL-- 498 (645)
T ss_dssp CCCEEEEE----------------TTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE--
T ss_pred CeEEEEEE----------------CCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE--
Confidence 99999984 578999999999999999999999999999999999999999999999999974
Q ss_pred CccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHH
Q 003189 704 GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVA 783 (840)
Q Consensus 704 ~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~a 783 (840)
++++++|++|..+|+.+|++ +.|+|+|||.||+|||+.||+||||| +|++.+
T Consensus 499 -------------------------~~~~~~P~~K~~~v~~l~~~--~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a 550 (645)
T 3j08_A 499 -------------------------VIAEVLPHQKSEEVKKLQAK--EVVAFVGDGINDAPALAQADLGIAVG-SGSDVA 550 (645)
T ss_dssp -------------------------EECSCCTTCHHHHHHHHTTT--CCEEEEECSSSCHHHHHHSSEEEEEC-CCSCCS
T ss_pred -------------------------EEEeCCHHhHHHHHHHHhhC--CeEEEEeCCHhHHHHHHhCCEEEEeC-CCcHHH
Confidence 99999999999999999976 78999999999999999999999999 999999
Q ss_pred HhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 784 KESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSS 834 (840)
Q Consensus 784 k~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~ 834 (840)
+++||+++++|++..+++++++||++|+||+||+.|+++||++++++++.+
T Consensus 551 ~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~la~~~ 601 (645)
T 3j08_A 551 VESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAAGL 601 (645)
T ss_dssp SCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999988644
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-33 Score=297.25 Aligned_cols=260 Identities=23% Similarity=0.354 Sum_probs=200.3
Q ss_pred HHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHH
Q 003189 426 FAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSI 505 (840)
Q Consensus 426 ~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i 505 (840)
.++.+++++|+|+|+++++|.|+++++||||||||||+|+|.|.+++ +. ++.+.++
T Consensus 4 ~a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~--~~------------------~~~l~~~---- 59 (263)
T 2yj3_A 4 SLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI--GD------------------SLSLAYA---- 59 (263)
Confidence 36789999999999999999999999999999999999999998764 00 1122221
Q ss_pred HhcCCceEEecCCCceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchH
Q 003189 506 FNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASE 585 (840)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~KGa~e 585 (840)
+.++ ..+.||...|+.+++...+...... ..| ....+.+....++|...
T Consensus 60 -----~~~e-------~~s~hp~a~ai~~~~~~~g~~~~~~---------~~~----------~~~~G~g~~~~~~~~~~ 108 (263)
T 2yj3_A 60 -----ASVE-------ALSSHPIAKAIVKYAKEQGVKILEV---------KDF----------KEISGIGVRGKISDKII 108 (263)
Confidence 1111 2377999999998876655421110 000 01112222222222100
Q ss_pred HHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcch
Q 003189 586 IILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGV 665 (840)
Q Consensus 586 ~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~~ 665 (840)
.+... .++.+ +.++ .+..+.|.+.+.|+++|++
T Consensus 109 -----------------~~G~~-------------~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~g~ 141 (263)
T 2yj3_A 109 -----------------EVKKA-------------ENNND-IAVY----------------INGEPIASFNISDVPRPNL 141 (263)
Confidence 00000 01212 2221 3456789999999999999
Q ss_pred HHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHH
Q 003189 666 KESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHL 745 (840)
Q Consensus 666 ~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l 745 (840)
.++++.|++.|+++.|+|||+..++..+++++||.. +|+...|++|..+++.+
T Consensus 142 ~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------~f~~~~p~~k~~~~~~l 194 (263)
T 2yj3_A 142 KDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE---------------------------YYSNLSPEDKVRIIEKL 194 (263)
Confidence 999999999999999999999999999999999964 77788899999999999
Q ss_pred HHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHH
Q 003189 746 RTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKF 816 (840)
Q Consensus 746 ~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~ 816 (840)
+.. ++.|+|+|||.||++|++.||+|++|| ++++.+++.||++++++++..+..+++++|+++.+|++|
T Consensus 195 ~~~-~~~~~~VGD~~~D~~aa~~Agv~va~g-~~~~~~~~~ad~v~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 195 KQN-GNKVLMIGDGVNDAAALALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 988 889999999999999999999999999 889999999999999999999999999999999999987
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.94 E-value=3.6e-26 Score=245.26 Aligned_cols=277 Identities=29% Similarity=0.401 Sum_probs=203.9
Q ss_pred HHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHH
Q 003189 427 AMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIF 506 (840)
Q Consensus 427 ~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 506 (840)
+.++++++|+++|+++++|+|+++++||||||||||.+.+.+.+++..+. . .++.+.+. ..
T Consensus 9 ~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~--~--------------~~~~l~~~---~~ 69 (287)
T 3a1c_A 9 GSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG--D--------------ERELLRLA---AI 69 (287)
T ss_dssp -----CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS--C--------------HHHHHHHH---HH
T ss_pred hHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC--C--------------HHHHHHHH---HH
Confidence 57889999999999999999999999999999999999999998876532 0 12333322 11
Q ss_pred hcCCceEEecCCCceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeCCCcEE--EEEcCch
Q 003189 507 NNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFR--VHCKGAS 584 (840)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~--~~~KGa~ 584 (840)
.. ..+.||++.|+.+++...|.+.... .... ...+.+.. .+.+|.+
T Consensus 70 ~e-------------~~s~hp~~~a~~~~~~~~g~~~~~~----~~~~---------------~~~G~~~~~~~~~~g~~ 117 (287)
T 3a1c_A 70 AE-------------RRSEHPIAEAIVKKALEHGIELGEP----EKVE---------------VIAGEGVVADGILVGNK 117 (287)
T ss_dssp HT-------------TTCCSHHHHHHHHHHHHTTCCCCCC----SCEE---------------EETTTEEEETTEEEECH
T ss_pred Hh-------------hcCCCHHHHHHHHHHHhcCCCcccc----ccce---------------eecCCCeEEEEEEECCH
Confidence 11 1267999999999998877642110 0000 11121111 1334655
Q ss_pred HHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcc
Q 003189 585 EIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG 664 (840)
Q Consensus 585 e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~ 664 (840)
+.+...+ . ++.+ .+.+..+.+..+|.+++++++ +..+.+.+...++++|+
T Consensus 118 ~~~~~~~--------~--~~~~----~~~~~~~~~~~~g~~~i~~~~----------------d~~~~~~~~~~~~~~~g 167 (287)
T 3a1c_A 118 RLMEDFG--------V--AVSN----EVELALEKLEREAKTAVIVAR----------------NGRVEGIIAVSDTLKES 167 (287)
T ss_dssp HHHHHTT--------C--CCCH----HHHHHHHHHHHTTCEEEEEEE----------------TTEEEEEEEEECCBCTT
T ss_pred HHHHhcC--------C--CccH----HHHHHHHHHHhCCCeEEEEEE----------------CCEEEEEEEeccccchh
Confidence 4432211 1 1111 244556778889999998874 35678888899999999
Q ss_pred hHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHH
Q 003189 665 VKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKH 744 (840)
Q Consensus 665 ~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~ 744 (840)
+.++++.|+++|+++.++||++...+..+++.+|+.. +|....|..|...++.
T Consensus 168 ~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~---------------------------~f~~i~~~~K~~~~~~ 220 (287)
T 3a1c_A 168 AKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------VIAEVLPHQKSEEVKK 220 (287)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------------EECSCCTTCHHHHHHH
T ss_pred HHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCce---------------------------eeeecChHHHHHHHHH
Confidence 9999999999999999999999999999999999864 6777789999999998
Q ss_pred HHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHH
Q 003189 745 LRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQ 814 (840)
Q Consensus 745 l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~ 814 (840)
++.. +.++|+||+.||++|++.|++++++| ++.+..++.+|+++.++++..+..++..+|+++.|||
T Consensus 221 l~~~--~~~~~vGDs~~Di~~a~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 221 LQAK--EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp HTTT--CCEEEEECTTTCHHHHHHSSEEEEEC-CCSCCSSCCSSEEESSSCTHHHHHHHHTTC-------
T ss_pred HhcC--CeEEEEECCHHHHHHHHHCCeeEEeC-CCCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHhhC
Confidence 8765 77999999999999999999999999 6777677889999998999999999999999999986
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-26 Score=209.11 Aligned_cols=108 Identities=27% Similarity=0.390 Sum_probs=99.3
Q ss_pred hHhHhhhcCceEEEEECCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecccccCCCCccccCCCCCeEEec
Q 003189 229 KDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSG 308 (840)
Q Consensus 229 ~~l~~~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv~k~~~~~~l~sG 308 (840)
++|.+ +.+..++|+|||++++|++++|+|||+|.|++||+|||||++++|+ +.||||+|||||.|+.|..++ .+|+|
T Consensus 4 ~~L~~-l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~-~~vdeS~LTGEs~pv~k~~g~-~v~aG 80 (113)
T 2hc8_A 4 KKLVG-LQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE-SYVDESMISGEPVPVLKSKGD-EVFGA 80 (113)
T ss_dssp HHHHH-HSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC-EEEECHHHHCCSSCEEECTTC-EECTT
T ss_pred HHHhc-CCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEce-EEEEccccCCCCccEEECCCC-EEEeC
Confidence 44444 4567899999999999999999999999999999999999999997 599999999999999999876 59999
Q ss_pred cEEeeceEEEEEEEEcccchHHHHHHhhcCC
Q 003189 309 TKVQNGSCKMLVTTVGMRTQWGKLMATLSEG 339 (840)
Q Consensus 309 t~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~ 339 (840)
|.+.+|.++++|+++|.+|++|+|.+++.++
T Consensus 81 t~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a 111 (113)
T 2hc8_A 81 TINNTGVLKIRATRVGGETLLAQIVKLVEDA 111 (113)
T ss_dssp CEECSSCEEEEEEECGGGSHHHHHHHHHHHH
T ss_pred CEEeeceEEEEEEEecCcCHHHHHHHHHHHh
Confidence 9999999999999999999999999988653
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6e-25 Score=233.88 Aligned_cols=276 Identities=27% Similarity=0.357 Sum_probs=195.4
Q ss_pred cccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecC
Q 003189 438 VRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGE 517 (840)
Q Consensus 438 vr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 517 (840)
+|+++++|+|++++.||||++||||.|+|+|.+++..+.. ......++. ++..
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~~----------------~~~~~~~~~-~~~~---------- 53 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNHS----------------EDELLQIAA-SLEA---------- 53 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSSC----------------HHHHHHHHH-HHHT----------
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCCC----------------HHHHHHHHH-Hhhc----------
Confidence 5889999999999999999999999999999998765431 122333221 1111
Q ss_pred CCceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhccccccc
Q 003189 518 GNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNS 597 (840)
Q Consensus 518 ~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~ 597 (840)
.+.+|...++.+++...|..... ...+...+- + +......+. . +..|.++.+...+..
T Consensus 54 -----~s~~~~~~a~~~~~~~~g~~~~~----~~~~~~~~g----~--~~~~~~~~~--~-~~~~~~~~~~~~~~~---- 111 (280)
T 3skx_A 54 -----RSEHPIAAAIVEEAEKRGFGLTE----VEEFRAIPG----K--GVEGIVNGR--R-YMVVSPGYIRELGIK---- 111 (280)
T ss_dssp -----TCCSHHHHHHHHHHHHTTCCCCC----CEEEEEETT----T--EEEEEETTE--E-EEEECHHHHHHTTCC----
T ss_pred -----cCCCHHHHHHHHHHHhcCCCCCC----ccceeecCC----C--EEEEEECCE--E-EEEecHHHHHHcCCC----
Confidence 15688999999988877654211 011111110 0 111111111 1 223555555433221
Q ss_pred CCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCC
Q 003189 598 NGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGI 677 (840)
Q Consensus 598 ~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi 677 (840)
.. .....+...+.+.+.+++ +..++|.+.+.++++|++.++++.|++.|+
T Consensus 112 ------~~--------~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~ 161 (280)
T 3skx_A 112 ------TD--------ESVEKLKQQGKTVVFILK----------------NGEVSGVIALADRIRPESREAISKLKAIGI 161 (280)
T ss_dssp ------CC--------TTHHHHHTTTCEEEEEEE----------------TTEEEEEEEEEEEECTTHHHHHHHHHHTTC
T ss_pred ------ch--------HHHHHHHhCCCeEEEEEE----------------CCEEEEEEEecCCCCHhHHHHHHHHHHCCC
Confidence 01 123345566777766652 456789999999999999999999999999
Q ss_pred EEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEc
Q 003189 678 TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTG 757 (840)
Q Consensus 678 ~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~G 757 (840)
++.++||++...+..+++.+|+.. .|....|.+|...++.+.+. . .++|+|
T Consensus 162 ~~~i~T~~~~~~~~~~~~~~gl~~---------------------------~f~~~~~~~k~~~~k~~~~~-~-~~~~vG 212 (280)
T 3skx_A 162 KCMMLTGDNRFVAKWVAEELGLDD---------------------------YFAEVLPHEKAEKVKEVQQK-Y-VTAMVG 212 (280)
T ss_dssp EEEEECSSCHHHHHHHHHHHTCSE---------------------------EECSCCGGGHHHHHHHHHTT-S-CEEEEE
T ss_pred EEEEEeCCCHHHHHHHHHHcCChh---------------------------HhHhcCHHHHHHHHHHHHhc-C-CEEEEe
Confidence 999999999999999999999965 78888999999999999887 4 469999
Q ss_pred CCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 758 DGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLT 822 (840)
Q Consensus 758 DG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~ 822 (840)
|+.||++|++.|++|++|| ++.+..++.||+++..+++..+..+++++|+++.++++|+.|++.
T Consensus 213 D~~nDi~~~~~Ag~~va~~-~~~~~~~~~a~~~~~~~~~~~l~~~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 213 DGVNDAPALAQADVGIAIG-AGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp CTTTTHHHHHHSSEEEECS-CCSSSCCCSSSEECSSCCTHHHHHHHHHHHTCCC-----------
T ss_pred CCchhHHHHHhCCceEEec-CCcHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999 788888999999999999999999999999999999999999874
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1e-25 Score=207.72 Aligned_cols=114 Identities=25% Similarity=0.382 Sum_probs=100.8
Q ss_pred HHHHHHhHhHhhhcCceEEEEECCe------EEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecccccCCCCcc
Q 003189 223 KQSLQFKDLDREKKKITVQVARNGF------RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPV 296 (840)
Q Consensus 223 ~~~~~~~~l~~~~~~~~v~V~RdG~------~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv 296 (840)
+.++..++|.+ +.+..++|+|+|+ +++|++++|+|||+|.|++||+|||||+|++|++ .||||+|||||.|+
T Consensus 4 ka~~~l~~L~~-l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~~-~vdeS~LTGEs~pv 81 (124)
T 2kij_A 4 TMSEALAKLIS-LQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITGEAMPV 81 (124)
T ss_dssp --CCHHHHHHH-TCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCCC-EEECTTTTCCSSCE
T ss_pred HHHHHHHHHhc-cCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEccE-EEEeccccCCCccE
Confidence 33444555654 4567999999764 6889999999999999999999999999999987 99999999999999
Q ss_pred ccCCCCCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCC
Q 003189 297 NVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG 339 (840)
Q Consensus 297 ~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~ 339 (840)
.|..++ .+|+||.|.+|.+.++|+++|.+|.+|+|++++.++
T Consensus 82 ~k~~g~-~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 82 AKKPGS-TVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp ECCTTE-EECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred EeCCCC-EEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 999865 699999999999999999999999999999998765
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.88 E-value=5.8e-24 Score=229.21 Aligned_cols=146 Identities=14% Similarity=0.153 Sum_probs=116.5
Q ss_pred cccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhc--CCceEEEec
Q 003189 656 GIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI--PKIQVMARS 733 (840)
Q Consensus 656 ~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~v~ar~ 733 (840)
...+++||+++++++.|+++|++++|+|||+..++.++|+++|+..++..++.... ..+++.+...+ +.+.++++.
T Consensus 137 ~~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l--~~~~~~~~~~~~~~~i~~~~k~ 214 (297)
T 4fe3_A 137 DSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFM--DFDENGVLKGFKGELIHVFNKH 214 (297)
T ss_dssp TSCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECE--EECTTSBEEEECSSCCCTTCHH
T ss_pred hcCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeE--EEcccceeEeccccccchhhcc
Confidence 45689999999999999999999999999999999999999999765432221110 11111111111 223356777
Q ss_pred CcccHHHHHHHHHHhCCCEEEEEcCCccCHHH---hhhCCccEEecC------CCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPA---LHEADIGLAMGI------AGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 734 ~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~a---l~~Advgiamg~------~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
.|.+|...+..+++. |+.|+|+|||+||+|| |+.||+|||||. ++++++++++||||+||++.+++.+|.
T Consensus 215 ~~~~k~~~~~~~~~~-~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~il 293 (297)
T 4fe3_A 215 DGALKNTDYFSQLKD-NSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSIL 293 (297)
T ss_dssp HHHHTCHHHHHHTTT-CCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHHH
T ss_pred cHHHHHHHHHHhhcc-CCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHHH
Confidence 888999999999888 8999999999999999 559999999995 677888999999999999999998864
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.83 E-value=5.3e-20 Score=179.84 Aligned_cols=134 Identities=21% Similarity=0.302 Sum_probs=115.1
Q ss_pred cCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCceee
Q 003189 524 LGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVP 603 (840)
Q Consensus 524 ~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~ 603 (840)
.+||+|.|+++++...+ ....+..++++..+||+|.||||+++++.+++++.+++|||||.|++.|+.+. .+|...|
T Consensus 32 ~~n~~d~Ail~~~~~~~--~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~~~~-~~g~~~~ 108 (170)
T 3gwi_A 32 LKNLLDTAVLEGTDEES--ARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVR-HNGEIVP 108 (170)
T ss_dssp CCCHHHHHHHHTSCHHH--HHHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECHHHHHTTEEEEE-ETTEEEE
T ss_pred CCChHHHHHHHHHHhcC--hhhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhHHHh-cCCCccc
Confidence 57999999999875432 34556789999999999999999999987777889999999999999999875 5888999
Q ss_pred CCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCC
Q 003189 604 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660 (840)
Q Consensus 604 l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~ 660 (840)
++++.++.+.+.++.|+++|+|||++|||+++..+.......|++|+|+|++||-|.
T Consensus 109 l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 109 LDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDH 165 (170)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEEEC-
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCccccCCcEEEehhccccc
Confidence 999999999999999999999999999999976532222345899999999999885
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.53 E-value=1.2e-14 Score=145.32 Aligned_cols=128 Identities=17% Similarity=0.232 Sum_probs=111.6
Q ss_pred HHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHH
Q 003189 668 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747 (840)
Q Consensus 668 aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~ 747 (840)
+++.|+++|+++.++||++...+..+++++|+.. +|... .+|...++.+.+
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~---------------------------~f~~~--~~K~~~~~~~~~ 104 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH---------------------------LFQGR--EDKLVVLDKLLA 104 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE---------------------------EECSC--SCHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH---------------------------HhcCc--CChHHHHHHHHH
Confidence 9999999999999999999999999999999964 44433 788888888877
Q ss_pred hCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCC----chHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 748 TLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN----FSTIVTVAKWGRSVYINIQKFVQFQ 820 (840)
Q Consensus 748 ~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~----f~~i~~~i~~gR~~~~~i~k~i~f~ 820 (840)
++| +.++|+||+.||.+|++.|+++++|+ ++.+.+++.||+++.+++ +..+.+.+..+|.++.+|++++.|+
T Consensus 105 ~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~~~~ 183 (189)
T 3mn1_A 105 ELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVA-NAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVYLEG 183 (189)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTTSTT
T ss_pred HcCCChhHEEEECCCHHHHHHHHHCCCeEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHHhcc
Confidence 655 67999999999999999999999999 789999999999998763 7778889999999999999999999
Q ss_pred HHHHH
Q 003189 821 LTVNV 825 (840)
Q Consensus 821 l~~N~ 825 (840)
+.||-
T Consensus 184 ~~~~~ 188 (189)
T 3mn1_A 184 HHHHH 188 (189)
T ss_dssp C----
T ss_pred ccccC
Confidence 99984
|
| >4aqr_D Calcium-transporting ATPase 8, plasma membrane-TY; Ca-binding protein-hydrolase complex, plasma-membrane calciu; 1.95A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.44 E-value=2.9e-14 Score=105.97 Aligned_cols=56 Identities=41% Similarity=0.615 Sum_probs=50.7
Q ss_pred CcHHHHHHHHHhhcccccccccchhhhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhc
Q 003189 17 TSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIH 77 (840)
Q Consensus 17 ~~~~~~~~~r~~~~~~~~~~r~f~~~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~ 77 (840)
+|.|+++|||+|+ +|+||+|||||++||+|++|++..++ ++|+...+.+|+.+|.+
T Consensus 1 ~s~e~L~rWR~a~-lVlNa~RRFR~t~dL~K~~e~~~~~r----kiR~~~~v~rAa~~F~~ 56 (57)
T 4aqr_D 1 SSIERLQQWRKAA-LVLNASRRFRYTLDLKKEQETREMRQ----KIRSHAHALLAANRFMD 56 (57)
T ss_dssp CHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHH-HHhchHhhhhhhcchhhHHHHHHHHH----HHHHHHHHHHHHHHhhc
Confidence 4789999999998 99999999999999999998776654 89999999999999964
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.35 E-value=5.4e-13 Score=145.84 Aligned_cols=149 Identities=14% Similarity=0.139 Sum_probs=112.8
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEe-----c
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR-----S 733 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar-----~ 733 (840)
-+++|++.+.++.|+++|+++.++||+....+..+++++|+.......+ .. .+..+..+ .
T Consensus 177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l-----~~----------~d~~~tg~~~~~~~ 241 (335)
T 3n28_A 177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTL-----EI----------VSGKLTGQVLGEVV 241 (335)
T ss_dssp CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEE-----EE----------ETTEEEEEEESCCC
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeee-----Ee----------eCCeeeeeeccccc
Confidence 4789999999999999999999999999999999999999963100000 00 00001111 1
Q ss_pred CcccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHH
Q 003189 734 SPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVY 810 (840)
Q Consensus 734 ~P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~ 810 (840)
.+..|...++.+.+++| +.++|+|||.||.+|++.|++|++| ++.+..++.||.++..+++..+..++.......
T Consensus 242 ~~kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~--~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~ 319 (335)
T 3n28_A 242 SAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY--HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQ 319 (335)
T ss_dssp CHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHT
T ss_pred ChhhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHh
Confidence 23457777776665545 6799999999999999999999999 688999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHHH
Q 003189 811 INIQKFVQFQLTVN 824 (840)
Q Consensus 811 ~~i~k~i~f~l~~N 824 (840)
.++++|+.|.++||
T Consensus 320 ~r~~~~~~~~~~~~ 333 (335)
T 3n28_A 320 QKLSWKSKEGHHHH 333 (335)
T ss_dssp TCCCCC--------
T ss_pred hhhccccccccccc
Confidence 99999999999998
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=6.9e-12 Score=124.10 Aligned_cols=133 Identities=17% Similarity=0.173 Sum_probs=109.8
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHH
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~ 740 (840)
+.++..++|+.|+++|+++.++||++...+..+++++|+.. +|.. ...|..
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~---------------------------~~~~--~k~k~~ 86 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL---------------------------FFLG--KLEKET 86 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------EEES--CSCHHH
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce---------------------------eecC--CCCcHH
Confidence 34567899999999999999999999999999999999964 3432 356888
Q ss_pred HHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHH----HHHHHHHHHHHHH
Q 003189 741 LVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIV----TVAKWGRSVYINI 813 (840)
Q Consensus 741 ~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~----~~i~~gR~~~~~i 813 (840)
.++.+.+++| +.++|+||+.||.+|++.|+++++|+ ++.+..++.||+++.+.+...++ +.+...|..++++
T Consensus 87 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~~~ 165 (180)
T 1k1e_A 87 ACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSVF 165 (180)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHHH
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeC-CccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchhhh
Confidence 8887766546 67999999999999999999999999 88899999999999877655555 4444567778888
Q ss_pred HHHHHHHHHH
Q 003189 814 QKFVQFQLTV 823 (840)
Q Consensus 814 ~k~i~f~l~~ 823 (840)
+.++.|....
T Consensus 166 ~~~~~~~~~~ 175 (180)
T 1k1e_A 166 DTAQGFLKSV 175 (180)
T ss_dssp HCHHHHHHHG
T ss_pred hhccchhhhh
Confidence 8888887654
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.26 E-value=4.1e-12 Score=127.28 Aligned_cols=102 Identities=18% Similarity=0.223 Sum_probs=88.1
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHH
Q 003189 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (840)
Q Consensus 667 ~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~ 746 (840)
.+|+.|+++|+++.++||++...+..+++++||.. +|... ..|...++.+.
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~---------------------------~~~~~--k~k~~~~~~~~ 109 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL---------------------------IYQGQ--DDKVQAYYDIC 109 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE---------------------------EECSC--SSHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE---------------------------EeeCC--CCcHHHHHHHH
Confidence 34999999999999999999999999999999964 44433 66888888877
Q ss_pred HhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchH
Q 003189 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST 798 (840)
Q Consensus 747 ~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~ 798 (840)
+++| +.++|+||+.||.+|++.|+++++|+ ++.+.+++.||+|+.+++-..
T Consensus 110 ~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~-na~~~~~~~ad~v~~~~~~~G 163 (195)
T 3n07_A 110 QKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVA-DGHPLLAQRANYVTHIKGGHG 163 (195)
T ss_dssp HHHCCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCHHHHHHCSEECSSCTTTT
T ss_pred HHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEEC-ChHHHHHHhCCEEEcCCCCCC
Confidence 6645 57999999999999999999999999 889999999999998766444
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.23 E-value=7.7e-11 Score=121.16 Aligned_cols=147 Identities=20% Similarity=0.189 Sum_probs=109.8
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----CC-ccc--cChhh-hc---------------
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAI--EGPEF-RE--------------- 714 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~----~~-~~~--~g~~~-~~--------------- 714 (840)
...+.|++.++|++|+++|++++++||++...+..+++++|+..+ ++ .+. +|+.+ ..
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~ 99 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 99 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHH
Confidence 456889999999999999999999999999999999999998532 11 122 23222 00
Q ss_pred ----------------------CCHHHHhhhcC--CceEE-----EecCc--ccHHHHHHHHHHhCC---CEEEEEcCCc
Q 003189 715 ----------------------KSDEELSKLIP--KIQVM-----ARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGT 760 (840)
Q Consensus 715 ----------------------~~~~~~~~~~~--~~~v~-----ar~~P--~~K~~~V~~l~~~~g---~~v~~~GDG~ 760 (840)
..++++.+... .+.+. ....| .+|...++.+.+++| +.++++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~ 179 (227)
T 1l6r_A 100 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 179 (227)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred hcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcH
Confidence 01111111110 23333 12235 799999999988755 5799999999
Q ss_pred cCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 003189 761 NDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (840)
Q Consensus 761 ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~ 805 (840)
||.+|++.|++|++|| ++.+..|+.||+++.+.+-.++.++++.
T Consensus 180 nD~~m~~~ag~~va~~-n~~~~~k~~a~~v~~~~~~~Gv~~~l~~ 223 (227)
T 1l6r_A 180 NDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 223 (227)
T ss_dssp GGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred HhHHHHHHcCceEEec-CchHHHHHhCCEEecCCCCcHHHHHHHH
Confidence 9999999999999999 8889999999999988888888887753
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.22 E-value=3.6e-11 Score=117.21 Aligned_cols=114 Identities=18% Similarity=0.206 Sum_probs=94.4
Q ss_pred CCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH--HcCCccCCCccccChhhhcCCHHHHhhh
Q 003189 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR--ECGILTDNGIAIEGPEFREKSDEELSKL 723 (840)
Q Consensus 646 ~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~--~~Gi~~~~~~~~~g~~~~~~~~~~~~~~ 723 (840)
..+...++.+.++|. .+|+.|++.|+++.++||+ ..+..+++ .+|+.
T Consensus 28 ~~~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~----------------------- 76 (168)
T 3ewi_A 28 SGDQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK----------------------- 76 (168)
T ss_dssp CSSCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-----------------------
T ss_pred cCCCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-----------------------
Confidence 344567777877777 3899999999999999999 67888888 56653
Q ss_pred cCCceEEEecCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchH
Q 003189 724 IPKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST 798 (840)
Q Consensus 724 ~~~~~v~ar~~P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~ 798 (840)
++. .+.+|...++.+.+++| +.++|+||+.||.+|++.|+++++|+ ++.+.+++.||+|+.+++=..
T Consensus 77 -----~~~--g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~-na~~~~k~~Ad~v~~~~~~~G 146 (168)
T 3ewi_A 77 -----TEV--SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPA-DACSGAQKAVGYICKCSGGRG 146 (168)
T ss_dssp -----EEC--SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECT-TCCHHHHTTCSEECSSCTTTT
T ss_pred -----EEE--CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeC-ChhHHHHHhCCEEeCCCCCcc
Confidence 222 34689999999887755 57999999999999999999999999 899999999999998765554
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.19 E-value=4.5e-11 Score=117.76 Aligned_cols=104 Identities=20% Similarity=0.238 Sum_probs=90.1
Q ss_pred HHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHH
Q 003189 668 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747 (840)
Q Consensus 668 aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~ 747 (840)
+++.|+++|+++.++||++...+..+++++|+. ++.. ...|...++.+.+
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~----------------------------~~~~--~~~k~~~l~~~~~ 96 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP----------------------------VLHG--IDRKDLALKQWCE 96 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC----------------------------EEES--CSCHHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe----------------------------eEeC--CCChHHHHHHHHH
Confidence 899999999999999999999999999999984 3332 2678888888777
Q ss_pred hCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHH
Q 003189 748 TLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTV 802 (840)
Q Consensus 748 ~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~ 802 (840)
++| +.++|+||+.||.+|++.|+++++|+ ++.+..++.||+++.+++..+++..
T Consensus 97 ~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~g~~~~ 153 (176)
T 3mmz_A 97 EQGIAPERVLYVGNDVNDLPCFALVGWPVAVA-SAHDVVRGAARAVTTVPGGDGAIRE 153 (176)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHH
T ss_pred HcCCCHHHEEEEcCCHHHHHHHHHCCCeEECC-ChhHHHHHhCCEEecCCCCCcHHHH
Confidence 655 67999999999999999999999999 7899999999999998885555443
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.19 E-value=1.9e-11 Score=122.18 Aligned_cols=123 Identities=20% Similarity=0.222 Sum_probs=99.9
Q ss_pred HHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHH
Q 003189 668 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747 (840)
Q Consensus 668 aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~ 747 (840)
+++.|+++|+++.++||++...+..+++++|+.. ++... ..|...++.+.+
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~---------------------------~~~~~--kpk~~~~~~~~~ 104 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH---------------------------YYKGQ--VDKRSAYQHLKK 104 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE---------------------------EECSC--SSCHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc---------------------------ceeCC--CChHHHHHHHHH
Confidence 4999999999999999999999999999999964 44333 334555555444
Q ss_pred hCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCC----chHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 748 TLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN----FSTIVTVAKWGRSVYINIQKFVQFQ 820 (840)
Q Consensus 748 ~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~----f~~i~~~i~~gR~~~~~i~k~i~f~ 820 (840)
.+| +.++|+||+.||.+|++.|+++++|+ ++.+..++.||+++.+++ +..+.+.+...|..++++.+++.+|
T Consensus 105 ~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~~~~~ 183 (191)
T 3n1u_A 105 TLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVS-NAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGYLKQ 183 (191)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHHHHTC
T ss_pred HhCCCHHHEEEECCCHHHHHHHHHCCCEEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHhc
Confidence 333 57999999999999999999999999 888999999999998877 5556667777888888877776554
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.13 E-value=1.2e-10 Score=118.19 Aligned_cols=98 Identities=21% Similarity=0.248 Sum_probs=87.3
Q ss_pred HHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHH
Q 003189 668 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747 (840)
Q Consensus 668 aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~ 747 (840)
+++.|+++|+++.++||++...+..+++++||.. +|... .+|...++.+.+
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~---------------------------~f~~~--k~K~~~l~~~~~ 134 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH---------------------------LYQGQ--SDKLVAYHELLA 134 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE---------------------------EECSC--SSHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch---------------------------hhccc--CChHHHHHHHHH
Confidence 8999999999999999999999999999999964 55444 678888888877
Q ss_pred hCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCC
Q 003189 748 TLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795 (840)
Q Consensus 748 ~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~ 795 (840)
++| +.++|+||+.||.+|++.|+++++|+ ++.+.+++.||+|+.+.+
T Consensus 135 ~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~-~~~~~~~~~Ad~v~~~~~ 184 (211)
T 3ij5_A 135 TLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVA-DAHPLLLPKAHYVTRIKG 184 (211)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCT
T ss_pred HcCcCcceEEEEcCCHHHHHHHHHCCCEEEeC-CccHHHHhhCCEEEeCCC
Confidence 645 67999999999999999999999999 788889999999998764
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=1.2e-10 Score=113.06 Aligned_cols=117 Identities=19% Similarity=0.210 Sum_probs=94.2
Q ss_pred HHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHH
Q 003189 668 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747 (840)
Q Consensus 668 aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~ 747 (840)
+++.|+++|+++.++||++...+..+++++|+.. ++... ..|...++.+.+
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------~~~~~--kpk~~~~~~~~~ 89 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY---------------------------LFQGV--VDKLSAAEELCN 89 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE---------------------------EECSC--SCHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE---------------------------eeccc--CChHHHHHHHHH
Confidence 8999999999999999999999999999999964 33332 567777777666
Q ss_pred hCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCch----HHHHHHHHHHHHHHHHHHH
Q 003189 748 TLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFS----TIVTVAKWGRSVYINIQKF 816 (840)
Q Consensus 748 ~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~----~i~~~i~~gR~~~~~i~k~ 816 (840)
++| +.++|+||+.||.+|++.|+++++++ ++.+..++.||+++.+++.. .+.+.+. +..+..+.++
T Consensus 90 ~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~e~~~~ll--~~~~~~~~~~ 162 (164)
T 3e8m_A 90 ELGINLEQVAYIGDDLNDAKLLKRVGIAGVPA-SAPFYIRRLSTIFLEKRGGEGVFREFVEKVL--GINLEDFIAV 162 (164)
T ss_dssp HHTCCGGGEEEECCSGGGHHHHTTSSEEECCT-TSCHHHHTTCSSCCCCCTTTTHHHHHHHHHT--TCCHHHHHHH
T ss_pred HcCCCHHHEEEECCCHHHHHHHHHCCCeEEcC-ChHHHHHHhCcEEeccCCCCcHHHHHHHHHH--ccCchhhHHh
Confidence 545 57999999999999999999999999 88999999999999998844 4444443 3334444444
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.98 E-value=3.2e-09 Score=112.29 Aligned_cols=146 Identities=25% Similarity=0.330 Sum_probs=106.0
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC-------CC-ccc---cChhhhc--C----------
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD-------NG-IAI---EGPEFRE--K---------- 715 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~-------~~-~~~---~g~~~~~--~---------- 715 (840)
..+-+.+.++++++++.|+.+.++||.+...+..+.+++|+... ++ .+. .++.+.. +
T Consensus 21 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~l~~~~~~~i~~ 100 (279)
T 4dw8_A 21 KEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWESKEMMYENVLPNEVVPVLYE 100 (279)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEETTTCCEEEECCCCGGGHHHHHH
T ss_pred CccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEECCCCeEEEEecCCHHHHHHHHH
Confidence 35678899999999999999999999999999999999997310 11 000 0000000 0
Q ss_pred -----------------------------------------------------------CHHH-------Hhhhc-CCce
Q 003189 716 -----------------------------------------------------------SDEE-------LSKLI-PKIQ 728 (840)
Q Consensus 716 -----------------------------------------------------------~~~~-------~~~~~-~~~~ 728 (840)
.++. +.+.+ ..+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (279)
T 4dw8_A 101 CARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAKCLIVGDAGKLIPVESELCIRLQGKIN 180 (279)
T ss_dssp HHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCSCEEEESCHHHHHHHHHHHHHHTTTTCE
T ss_pred HHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCceEEEEeCCHHHHHHHHHHHHHHhcCCEE
Confidence 1111 11112 2232
Q ss_pred EEE------ecCc--ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCch
Q 003189 729 VMA------RSSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFS 797 (840)
Q Consensus 729 v~a------r~~P--~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~ 797 (840)
++. ...| .+|...++.+.+++| +.++++||+.||.+|++.|++|+||| ++.+..|+.||+|+.+++-.
T Consensus 181 ~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~ 259 (279)
T 4dw8_A 181 VFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMG-NAQEPVKKAADYITLTNDED 259 (279)
T ss_dssp EEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCGGGT
T ss_pred EEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcC-CCcHHHHHhCCEEcCCCCCc
Confidence 221 2233 489999999887766 46999999999999999999999999 89999999999999888888
Q ss_pred HHHHHHHH
Q 003189 798 TIVTVAKW 805 (840)
Q Consensus 798 ~i~~~i~~ 805 (840)
+|.++++.
T Consensus 260 Gv~~~i~~ 267 (279)
T 4dw8_A 260 GVAEAIER 267 (279)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88888764
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.97 E-value=1.1e-09 Score=110.76 Aligned_cols=132 Identities=18% Similarity=0.154 Sum_probs=99.6
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceE---EEe--c
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQV---MAR--S 733 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v---~ar--~ 733 (840)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.-.+ ..+ +.. .
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~---------------~~~~~~~~~~~~ 138 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVEN---------------DALNGLVTGHMM 138 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEET---------------TEEEEEEEESCC
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeC---------------CEEEeeeccCCC
Confidence 46899999999999999999999999999999999999998642111110000 000 011 1
Q ss_pred CcccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHH
Q 003189 734 SPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGR 807 (840)
Q Consensus 734 ~P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR 807 (840)
.+..|...++.+.+++| +.+.++||+.||.+|++.|+++++| ++.+..++.||+++.+++|..+..++.|-.
T Consensus 139 ~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~--~~~~~l~~~ad~v~~~~dl~~~~~~~~~~~ 213 (217)
T 3m1y_A 139 FSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF--NAKEVLKQHATHCINEPDLALIKPLIEGHH 213 (217)
T ss_dssp STTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE--SCCHHHHTTCSEEECSSBGGGGTTC-----
T ss_pred CCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE--CccHHHHHhcceeecccCHHHHHHHhcccc
Confidence 24667888877766645 5689999999999999999999999 567888999999999999999998887743
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.9e-09 Score=121.21 Aligned_cols=135 Identities=20% Similarity=0.272 Sum_probs=108.9
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC--ccccChhhhcCCHHHHhhhcCCceEEEec----
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGPEFREKSDEELSKLIPKIQVMARS---- 733 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~ar~---- 733 (840)
+++|++.+.++.|++.|+++.++||.....+..+++.+|+..... +.+.+ ..+.++.
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d-----------------g~~tg~~~~~v 318 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVD-----------------GTLTGRVVGPI 318 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEET-----------------TEEEEEECSSC
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeC-----------------CEEEeeEccCC
Confidence 789999999999999999999999999999999999999963100 00000 0011111
Q ss_pred -CcccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHH
Q 003189 734 -SPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSV 809 (840)
Q Consensus 734 -~P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~ 809 (840)
.+..|..+++.+.+++| +.+.|+||+.||.+|++.|++|+++ ++.+..++.||+++..+++..+..++.++|.-
T Consensus 319 ~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~--~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~ 396 (415)
T 3p96_A 319 IDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF--NAKPALREVADASLSHPYLDTVLFLLGVTRGE 396 (415)
T ss_dssp CCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHH
T ss_pred CCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE--CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHH
Confidence 25678888888776655 5799999999999999999999999 56788899999999999999999999998877
Q ss_pred HHHH
Q 003189 810 YINI 813 (840)
Q Consensus 810 ~~~i 813 (840)
+...
T Consensus 397 ~~~~ 400 (415)
T 3p96_A 397 IEAA 400 (415)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6554
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.94 E-value=6e-09 Score=110.83 Aligned_cols=69 Identities=23% Similarity=0.331 Sum_probs=62.3
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~ 805 (840)
..|...++.+.+++| +.++++||+.||.+|++.|++|+||| ++.+..|+.||+|+.+++-.+|.++++.
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMG-NAVPEIKRKADWVTRSNDEQGVAYMMKE 272 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEec-CCcHHHHHhcCEECCCCCccHHHHHHHH
Confidence 679999999888766 56899999999999999999999999 9999999999999988888889888764
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.88 E-value=9e-09 Score=107.57 Aligned_cols=68 Identities=29% Similarity=0.279 Sum_probs=60.2
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
.+|...++.+.+++| +.++++||+.||.+|++.|++|+||| ++.+..|+.||+|+.+.+-.++.++++
T Consensus 182 ~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~dGva~~i~ 252 (258)
T 2pq0_A 182 GSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMG-NAHEEVKRVADFVTKPVDKEGIWYGLK 252 (258)
T ss_dssp CCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEET-TCCHHHHHTCSEEECCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeC-CCcHHHHHhCCEEeCCCCcchHHHHHH
Confidence 468888888877656 56899999999999999999999999 899999999999998888888888875
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.88 E-value=2.7e-09 Score=112.93 Aligned_cols=68 Identities=26% Similarity=0.397 Sum_probs=51.0
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
.+|...++.+.+++| +.++++||+.||.+|++.|++|+||| ++.+..|+.||+|..+++=.+|.++++
T Consensus 196 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 3mpo_A 196 ASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMG-NAIDEVKEAAQAVTLTNAENGVAAAIR 266 (279)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC----CCHHHHHCSCBC------CHHHHHC
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeecc-CCCHHHHHhcceeccCCCccHHHHHHH
Confidence 459999999888766 56999999999999999999999999 899999999999998877788887764
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.87 E-value=1.1e-08 Score=108.70 Aligned_cols=145 Identities=21% Similarity=0.271 Sum_probs=103.0
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----CCc-cc--cChhhh--c---------------
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NGI-AI--EGPEFR--E--------------- 714 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~----~~~-~~--~g~~~~--~--------------- 714 (840)
..+-+.+.++++++++.|++++++||++...+..+.+++|+... ++. +. .|+.+. .
T Consensus 37 ~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i~~~~~~~l~~~~l~~~~~~~i~~~~~~ 116 (285)
T 3pgv_A 37 HFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARVHDSDGQQIFAHNLDRDIAADLFEIVRN 116 (285)
T ss_dssp SCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEEECTTSCEEEECCCCHHHHHHHTTTTTT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEEECCCCCEEEecCCCHHHHHHHHHHHhh
Confidence 45778899999999999999999999999999999999998521 110 00 000000 0
Q ss_pred ------------------------------------------------------CCHHH-------HhhhcC-CceEE--
Q 003189 715 ------------------------------------------------------KSDEE-------LSKLIP-KIQVM-- 730 (840)
Q Consensus 715 ------------------------------------------------------~~~~~-------~~~~~~-~~~v~-- 730 (840)
..++. +.+.+. .+.+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s 196 (285)
T 3pgv_A 117 DPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSFS 196 (285)
T ss_dssp CTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEECSCHHHHHHHHHHHHHHHGGGEEEEES
T ss_pred cCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeCCCHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 01111 111111 12111
Q ss_pred ----EecCc--ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCE--EeccCCchHH
Q 003189 731 ----ARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV--IILDDNFSTI 799 (840)
Q Consensus 731 ----ar~~P--~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDi--vlldd~f~~i 799 (840)
....| ..|...++.+.+.+| +.++++||+.||.+|++.|++|+||| ++.+..|+.||+ |..+++=.+|
T Consensus 197 ~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~-Na~~~vk~~A~~~~v~~sn~edGv 275 (285)
T 3pgv_A 197 TLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMA-NAHQRLKDLHPELEVIGSNADDAV 275 (285)
T ss_dssp STTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCTTSEECCCGGGTHH
T ss_pred CCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEcc-CCCHHHHHhCCCCEecccCCcchH
Confidence 11222 579999999988777 57999999999999999999999999 999999999984 6667777788
Q ss_pred HHHHH
Q 003189 800 VTVAK 804 (840)
Q Consensus 800 ~~~i~ 804 (840)
.++++
T Consensus 276 a~~i~ 280 (285)
T 3pgv_A 276 PRYLR 280 (285)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87765
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=4.6e-09 Score=105.26 Aligned_cols=128 Identities=20% Similarity=0.280 Sum_probs=92.3
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC--ccccChhhhcCCHHHHhhhcCCceEEEe-cCc
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGPEFREKSDEELSKLIPKIQVMAR-SSP 735 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~ar-~~P 735 (840)
-++.|+++++++.|++.|+++.++||+....+..+.+.+|+..... ...... .+ ...+... ..+
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~-~~~~~~~~~~~ 141 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDG------------KL-TGDVEGEVLKE 141 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT------------EE-EEEEECSSCST
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECC------------EE-cCCcccCccCC
Confidence 3567899999999999999999999999988888888888742100 000000 00 0000000 124
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVT 801 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~ 801 (840)
..|...+..+.+++| +.++++||+.||.+|++.|+++++|+ +.+..++.||+++.++++..+..
T Consensus 142 ~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~--~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 142 NAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC--AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp THHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES--CCHHHHTTCSEEECSSCGGGGGG
T ss_pred ccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC--CCHHHHhhcceeecchhHHHHHH
Confidence 578777777666545 46999999999999999999999998 45666888999998777877654
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=6.2e-09 Score=103.50 Aligned_cols=108 Identities=19% Similarity=0.219 Sum_probs=89.5
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHH
Q 003189 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (840)
Q Consensus 667 ~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~ 746 (840)
.+++.|+++|+++.++||++...+..+++++|+.. +|.. ...|...++.+.
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~---------------------------~~~~--~kpk~~~~~~~~ 110 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH---------------------------LYQG--QSNKLIAFSDLL 110 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE---------------------------EECS--CSCSHHHHHHHH
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce---------------------------eecC--CCCCHHHHHHHH
Confidence 48999999999999999999999999999999864 3332 355677777776
Q ss_pred HhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHH-HHHH
Q 003189 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIV-TVAK 804 (840)
Q Consensus 747 ~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~-~~i~ 804 (840)
+++| +.++|+||+.||.++++.|+++++++ ++.+..++.||+++.+.+-.+++ ++++
T Consensus 111 ~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 111 EKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp HHHTCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred HHcCCCHHHEEEECCCHHHHHHHHHCCCEEEec-CcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 6546 67999999999999999999999998 67777888999999887566655 5554
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.83 E-value=1.2e-08 Score=108.35 Aligned_cols=68 Identities=22% Similarity=0.214 Sum_probs=61.9
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
.+|...++.+.+++| +.|+++||+.||.+|++.|++|+||| ++.+..|+.||+|..+++-.+|.++++
T Consensus 210 ~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 210 VSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVS-NARQEVIAAAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcC-CCCHHHHHhcCeECCCCCCChHHHHHH
Confidence 579999999988877 56999999999999999999999999 999999999999999888888888775
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.82 E-value=5e-09 Score=113.09 Aligned_cols=128 Identities=18% Similarity=0.278 Sum_probs=97.9
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEe-----cC
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR-----SS 734 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar-----~~ 734 (840)
+++|++.+.++.|++.|+++.++||.....+..+++.+|+...-..++.-.+ -..-++ ..
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~d---------------g~~tg~i~~~~~~ 243 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRD---------------NVLTDNITLPIMN 243 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEET---------------TEEEEEECSSCCC
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeC---------------CeeeeeEecccCC
Confidence 4889999999999999999999999999999999999999641110000000 000011 12
Q ss_pred cccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 735 PMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 735 P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
+..|...++.+.+++| +.+.|+||+.||.+|++.|++|++++ +.+..++.||.++..+++..+..+++
T Consensus 244 ~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~~--~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 244 AANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAWK--AKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEES--CCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred CCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEeC--CCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 3567777777655545 57999999999999999999999994 67778899999999899999887654
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.81 E-value=1.1e-08 Score=107.33 Aligned_cols=70 Identities=29% Similarity=0.346 Sum_probs=63.1
Q ss_pred cccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 003189 735 PMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (840)
Q Consensus 735 P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~ 805 (840)
+.+|...++.+.+++| +.++++||+.||.+|++.|++|+||| ++.+.+|+.||+|..+++=.+|.++++.
T Consensus 192 ~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 192 GTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMG-NASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred CCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeC-CCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 3689999999888866 56899999999999999999999999 9999999999999999888899888753
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.80 E-value=1.3e-08 Score=106.97 Aligned_cols=69 Identities=28% Similarity=0.307 Sum_probs=61.4
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~ 805 (840)
..|...++.+.+++| +.++++||+.||.+|++.|++|+||| ++.+..|+.||+|+.+.+=.+|.++++.
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMK-NSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEET-TSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEec-CccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 569999988877755 56999999999999999999999999 8999999999999998888888888754
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.78 E-value=4.4e-08 Score=100.60 Aligned_cols=146 Identities=21% Similarity=0.260 Sum_probs=103.7
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----CC-ccc-cChh-------------------h-
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAI-EGPE-------------------F- 712 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~----~~-~~~-~g~~-------------------~- 712 (840)
..+.+.+.+++++++++|+++.++||++...+..+.+.+|+..+ ++ .+. .|+. +
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~ 98 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 98 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCC
Confidence 35678899999999999999999999999999999999997531 11 111 1110 0
Q ss_pred --h-----------------cCCHHHHhhh---c-CCceEE-----EecC--cccHHHHHHHHHHhCC---CEEEEEcCC
Q 003189 713 --R-----------------EKSDEELSKL---I-PKIQVM-----ARSS--PMDKHTLVKHLRTTLG---EVVAVTGDG 759 (840)
Q Consensus 713 --~-----------------~~~~~~~~~~---~-~~~~v~-----ar~~--P~~K~~~V~~l~~~~g---~~v~~~GDG 759 (840)
. ...++.+... + ..+.+. .... ...|...++.+.+++| +.++++||+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~ 178 (231)
T 1wr8_A 99 NARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 178 (231)
T ss_dssp TCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred CceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCC
Confidence 0 0022222211 1 123333 1222 3579999998877655 568999999
Q ss_pred ccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 003189 760 TNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (840)
Q Consensus 760 ~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~ 805 (840)
.||.+|++.|+++++|+ ++.+..++.||+++.+.+-.++.++++.
T Consensus 179 ~nD~~~~~~ag~~v~~~-~~~~~~~~~a~~v~~~~~e~Gv~~~l~~ 223 (231)
T 1wr8_A 179 ENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYH 223 (231)
T ss_dssp GGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEec-CCCHHHHhhCCEEecCCCcchHHHHHHH
Confidence 99999999999999999 7888889999999877666677776653
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.77 E-value=3.5e-08 Score=95.18 Aligned_cols=110 Identities=14% Similarity=0.212 Sum_probs=89.4
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHH
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~ 740 (840)
+.|++.++++.|++.|+++.++||.+...+..+.+++|+.. .|.. +..|..
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~---------------------------~~~~--~kp~~~ 87 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE---------------------------IYTG--SYKKLE 87 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE---------------------------EEEC--C--CHH
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh---------------------------hccC--CCCCHH
Confidence 45778999999999999999999999999999999999863 3433 334555
Q ss_pred HHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHH
Q 003189 741 LVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIV 800 (840)
Q Consensus 741 ~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~ 800 (840)
.++.+.+.+| +.+.|+||+.||.++++.|+++++++ ++.+..++.||+++.+.+-..++
T Consensus 88 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~a~~v~~~~~~~g~~ 149 (162)
T 2p9j_A 88 IYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVR-NAVEEVRKVAVYITQRNGGEGAL 149 (162)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECSSCSSSSHH
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEec-CccHHHHhhCCEEecCCCCCcHH
Confidence 5555444434 57999999999999999999999998 77888888999999887766666
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.75 E-value=2.5e-08 Score=108.49 Aligned_cols=150 Identities=15% Similarity=0.239 Sum_probs=101.2
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC-CccccChh------------------hhcCCHHHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPE------------------FREKSDEEL 720 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~-~~~~~g~~------------------~~~~~~~~~ 720 (840)
++++++.++++.|++ |+.+.++||++...+..+.+.+|+.... ...+.-.. +....++++
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~l 181 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELF 181 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhhcccccchhhhccccccceeEEecCHHHHhhhhHHHH
Confidence 568999999999999 9999999999977777778888873210 00000000 000000111
Q ss_pred hhhcCCc------eEEE----ecCcccHHHHHHHHHHhCC--CEEEEEcCCccCHHHhhhC----CccEEecCCCcHHHH
Q 003189 721 SKLIPKI------QVMA----RSSPMDKHTLVKHLRTTLG--EVVAVTGDGTNDAPALHEA----DIGLAMGIAGTEVAK 784 (840)
Q Consensus 721 ~~~~~~~------~v~a----r~~P~~K~~~V~~l~~~~g--~~v~~~GDG~ND~~al~~A----dvgiamg~~g~~~ak 784 (840)
+.++++ ..+. -..+.+|...++.+... . +.|+++|||.||++||+.| ++|||| ++.+.+|
T Consensus 182 -~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~-~~~~~via~GDs~NDi~ml~~A~~~~g~~vam--na~~~lk 257 (332)
T 1y8a_A 182 -RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCES-KGIDFPVVVGDSISDYKMFEAARGLGGVAIAF--NGNEYAL 257 (332)
T ss_dssp -HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHH-HTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--SCCHHHH
T ss_pred -HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChh-hcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe--cCCHHHH
Confidence 111100 0010 11246798888877654 3 5599999999999999999 999999 6789999
Q ss_pred hhcCEEeccCCchHHHHHH----HHHHHHHHHHHH
Q 003189 785 ESADVIILDDNFSTIVTVA----KWGRSVYINIQK 815 (840)
Q Consensus 785 ~~aDivlldd~f~~i~~~i----~~gR~~~~~i~k 815 (840)
+.||+|+.+++...+..++ ..||..+ |+-|
T Consensus 258 ~~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~-~~~~ 291 (332)
T 1y8a_A 258 KHADVVIISPTAMSEAKVIELFMERKERAF-EVLS 291 (332)
T ss_dssp TTCSEEEECSSTHHHHHHHHHHHHHGGGGG-GGGG
T ss_pred hhCcEEecCCCCCHHHHHHHHHHHcCCchh-HHHH
Confidence 9999999998887777664 4577666 4433
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.74 E-value=2.9e-08 Score=106.55 Aligned_cols=69 Identities=22% Similarity=0.251 Sum_probs=62.1
Q ss_pred cccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 735 PMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 735 P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
+..|...++.+.+++| +.++++||+.||.+|++.|++|+||| ++.+..|+.||+|+.+++=.++.++++
T Consensus 226 ~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 226 GLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMA-NAPKNVKAAANYQAKSNDESGVLDVID 297 (304)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcC-CcCHHHHHhccEEcCCCCcchHHHHHH
Confidence 3679999999988766 56999999999999999999999999 899999999999998877888888876
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.66 E-value=5.3e-08 Score=99.65 Aligned_cols=127 Identities=28% Similarity=0.386 Sum_probs=93.6
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+......++.+++.. ....|
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~--------------------~~kp~ 162 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVE--------------------RGKPH 162 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTSS--------------------SCTTS
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCCC--------------------CCCCC
Confidence 3467899999999999999999999999999999999999865333333332211 01223
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCc---cEEecCCCcHHHHh-hcCEEeccCCchHHHHHHHHHH
Q 003189 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI---GLAMGIAGTEVAKE-SADVIILDDNFSTIVTVAKWGR 807 (840)
Q Consensus 739 ~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Adv---giamg~~g~~~ak~-~aDivlldd~f~~i~~~i~~gR 807 (840)
...++.+.+++| +.++++||+.||.+|++.|++ +++||.+..+..++ .||+++ +++..+.++++.++
T Consensus 163 ~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~~~~el~~~l~~~~ 236 (237)
T 4ex6_A 163 PDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVV--DSFPAAVTAVLDGH 236 (237)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEE--SSHHHHHHHHHHC-
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEE--CCHHHHHHHHHccC
Confidence 344444433334 579999999999999999999 99998444355554 799998 45999998887654
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.64 E-value=2.4e-08 Score=99.09 Aligned_cols=119 Identities=24% Similarity=0.324 Sum_probs=90.5
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
+++|++.+.++.|++.|+++.++|+++...+..+ +.+|+......+..... ...-....|..|.
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~k~ 142 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFMANRAIFEDG---------------KFQGIRLRFRDKG 142 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEEEEEEETT---------------EEEEEECCSSCHH
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhheeeEEeeCC---------------ceECCcCCccCHH
Confidence 7899999999999999999999999998888888 88887531000000000 0001344668899
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 740 ~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
..++.+ . .+.+.++||+.||.+|++.|+++++|+ ++.+ .||+++. ++..+.++++
T Consensus 143 ~~l~~l--~-~~~~i~iGD~~~Di~~~~~ag~~v~~~-~~~~----~ad~v~~--~~~el~~~l~ 197 (201)
T 4ap9_A 143 EFLKRF--R-DGFILAMGDGYADAKMFERADMGIAVG-REIP----GADLLVK--DLKELVDFIK 197 (201)
T ss_dssp HHHGGG--T-TSCEEEEECTTCCHHHHHHCSEEEEES-SCCT----TCSEEES--SHHHHHHHHH
T ss_pred HHHHhc--C-cCcEEEEeCCHHHHHHHHhCCceEEEC-CCCc----cccEEEc--cHHHHHHHHH
Confidence 999888 3 567889999999999999999999999 6665 8999985 4777776654
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.64 E-value=8.7e-08 Score=101.60 Aligned_cols=68 Identities=26% Similarity=0.343 Sum_probs=60.0
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
.+|...++.+.+.+| +.++++||+.||.+|++.|++|++|| ++.+..|+.||+++.+.+-.++.++++
T Consensus 197 ~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~a~~v~~~~~~dGV~~~l~ 267 (282)
T 1rkq_A 197 VNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIE 267 (282)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEec-CCcHHHHhhCCEEecCCCcchHHHHHH
Confidence 489999999887655 46899999999999999999999999 888888999999998877788888765
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.57 E-value=1.4e-07 Score=99.36 Aligned_cols=68 Identities=28% Similarity=0.318 Sum_probs=59.9
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
..|...++.+.+++| +.++++||+.||.+|++.|++|++|| ++.+..|+.||+|+.+.+-.++.++++
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~dGVa~~l~ 260 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 260 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeC-CccHHHHHhCCeeCcCCCCChHHHHHH
Confidence 589999999887756 56999999999999999999999999 888888999999998777778887765
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=4.3e-07 Score=86.53 Aligned_cols=143 Identities=15% Similarity=0.240 Sum_probs=87.5
Q ss_pred ccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceeEcCChhhHHHHHHH
Q 003189 457 KTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFG 536 (840)
Q Consensus 457 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~ 536 (840)
..||+|.|.++|+++...+.. ++ .+++..+.... ..+.||+.+|+++++
T Consensus 13 ~~~tit~gnr~vt~v~~~~g~----------------~e--~elL~lAAs~E-------------~~SeHPla~AIv~~A 61 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQGV----------------DE--KTLADAAQLAS-------------LADETPEGRSIVILA 61 (156)
T ss_dssp --------CEEEEEEEECTTS----------------CH--HHHHHHHHHTT-------------SSCCSHHHHHHHHHH
T ss_pred CCCceecCCCeEEEEEecCCC----------------CH--HHHHHHHHHHh-------------CcCCCHHHHHHHHHH
Confidence 479999999999998764321 11 22232222221 127799999999999
Q ss_pred HHc-CCChHHHhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHH
Q 003189 537 LLL-GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNET 615 (840)
Q Consensus 537 ~~~-~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~ 615 (840)
... +........ ......+|++..++.++.+ ++ +-+.+|+++.|...+.. .|. .+.+ .+.+.
T Consensus 62 ~~~~~l~~~~~~~--~~~~~~~F~a~~G~~Gv~v---~G--~~v~vGn~~~i~~l~~~----~gi--~~~~----~~~~~ 124 (156)
T 1svj_A 62 KQRFNLRERDVQS--LHATFVPFTAQSRMSGINI---DN--RMIRKGSVDAIRRHVEA----NGG--HFPT----DVDQK 124 (156)
T ss_dssp HHHTTCCCCCHHH--HTCEEEEEETTTTEEEEEE---TT--EEEEEEEHHHHHHHHHH----HTC--CCCH----HHHHH
T ss_pred HHhcCCCcccccc--cccceeeccccCCCCeEEE---CC--EEEEEeCcHHHHHHHHH----cCC--CCcH----HHHHH
Confidence 876 654321100 0134578999888778743 33 34678998877665542 121 1222 25677
Q ss_pred HHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCc
Q 003189 616 IEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP 663 (840)
Q Consensus 616 ~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~ 663 (840)
++.++.+|.+++.+| .|..++|++++.|++||
T Consensus 125 ~~~la~~G~T~v~VA----------------~d~~l~GvIalaD~iK~ 156 (156)
T 1svj_A 125 VDQVARQGATPLVVV----------------EGSRVLGVIALKDIVKG 156 (156)
T ss_dssp HHHHHHTTCEEEEEE----------------ETTEEEEEEEEEECCCC
T ss_pred HHHHHhCCCCEEEEE----------------ECCEEEEEEEEecCCCC
Confidence 888999999999998 35689999999999997
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.52 E-value=5e-07 Score=90.39 Aligned_cols=126 Identities=18% Similarity=0.121 Sum_probs=94.1
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC-CccccChhhhcCCHHHHhhhcCCceEEE--ecCcc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMA--RSSPM 736 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~a--r~~P~ 736 (840)
++.|++.+.++.|++. +++.++|+.+...+..+.+.+|+...- ..+..+.+. .... .-.|.
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~---------------~~~~~~~p~p~ 132 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD---------------RVVGYQLRQKD 132 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTS---------------CEEEEECCSSS
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCc---------------eEEeeecCCCc
Confidence 5789999999999999 999999999999999999999986421 111111110 0111 25688
Q ss_pred cHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
.|...++.+... ++.+.|+||+.||.+|.+.|+++++|+ ...+..+.+.+++. -+++..+..++.
T Consensus 133 ~~~~~l~~l~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~-~~~~~~l~~~l~ 197 (206)
T 1rku_A 133 PKRQSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPA-VHTYEDLKREFL 197 (206)
T ss_dssp HHHHHHHHHHHT-TCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCE-ECSHHHHHHHHH
T ss_pred hHHHHHHHHHhc-CCEEEEEeCChhhHHHHHhcCccEEEC-CcHHHHHHHhhhcc-ccchHHHHHHHH
Confidence 899999999877 789999999999999999999999985 44444333445532 356888877653
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.51 E-value=2.3e-07 Score=93.10 Aligned_cols=127 Identities=14% Similarity=0.167 Sum_probs=87.7
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC----CccccChhhhcCCHHHHhhhcCCceEEE--ec
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN----GIAIEGPEFREKSDEELSKLIPKIQVMA--RS 733 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~v~a--r~ 733 (840)
.++|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..+..... ...-+. ..
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~ 147 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDG--------------SFKELDNSNG 147 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTS--------------BEEEEECTTS
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCC--------------ceeccCCCCC
Confidence 37899999999999999999999999999999999999985310 00110000 000011 12
Q ss_pred CcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhh----CCccEEecCCCcHHHHhhcCEEeccCCchHHHHHH
Q 003189 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHE----ADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 734 ~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~----Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i 803 (840)
+|..|...+..+.....+.+.|+||+.||.+|++. +.++++|+ +..+..+..||+++. ++..+.+++
T Consensus 148 ~~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~-~~~~~~~~~ad~v~~--~~~el~~~l 218 (219)
T 3kd3_A 148 ACDSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEH-IEREKVINLSKYVAR--NVAELASLI 218 (219)
T ss_dssp TTTCHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSS-CCCHHHHHHCSEEES--SHHHHHHHH
T ss_pred CcccHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCc-cccHHHHhhcceeeC--CHHHHHHhh
Confidence 34566666655422225789999999999999976 35555566 566778889999984 477776553
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.50 E-value=2.4e-07 Score=93.80 Aligned_cols=125 Identities=12% Similarity=0.139 Sum_probs=93.1
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+......++.+... ..+..|
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~--------------------~~~kp~ 144 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLD--------------------GKLSTK 144 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTT--------------------SSSCSH
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCC--------------------CCCCCC
Confidence 357899999999999999999999999999999999999986422222211110 012346
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCc---cEEecCCCcHHH-HhhcCEEeccCCchHHHHHHHH
Q 003189 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI---GLAMGIAGTEVA-KESADVIILDDNFSTIVTVAKW 805 (840)
Q Consensus 739 ~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Adv---giamg~~g~~~a-k~~aDivlldd~f~~i~~~i~~ 805 (840)
...++.+.+++| +.++++||+.||.+|++.|++ +++||....+.. +..||+++. ++..+.+++..
T Consensus 145 ~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--s~~el~~~~~~ 216 (226)
T 3mc1_A 145 EDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVN--SVDELHKKILE 216 (226)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEES--SHHHHHHHHHT
T ss_pred HHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEEC--CHHHHHHHHHH
Confidence 666666655545 579999999999999999999 888883333333 688999984 58888887654
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=8.5e-08 Score=96.04 Aligned_cols=124 Identities=15% Similarity=0.074 Sum_probs=93.5
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC--CccccChhhhcCCHHHHhhhcCCceEEEecCccc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (840)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.++. . ....
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~-------------------~--~~kp 128 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDE-------------------A--PPKP 128 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTT-------------------S--CCTT
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCC-------------------C--CCCC
Confidence 45689999999999999999999999999999999999985421 11221111 0 1122
Q ss_pred HHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCc-cEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHH
Q 003189 738 KHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI-GLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGR 807 (840)
Q Consensus 738 K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Adv-giamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR 807 (840)
|...++.+.+++| +.+.++||+.||..|.+.|++ +|+|+ ++.+..++.||+++. ++..+...++-.|
T Consensus 129 ~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~~ad~v~~--~~~el~~~~~~~~ 199 (205)
T 3m9l_A 129 HPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVN-LPDNPWPELTDWHAR--DCAQLRDLLSAEG 199 (205)
T ss_dssp SSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECS-SSSCSCGGGCSEECS--SHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEe-CCCCcccccCCEEeC--CHHHHHHHHHhcc
Confidence 3344555544445 578999999999999999999 99999 666666888999984 5888888876544
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.48 E-value=1.1e-07 Score=98.25 Aligned_cols=137 Identities=14% Similarity=0.177 Sum_probs=93.1
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHc-CCccCCCc-cc-cChh------hh--cC-------------
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC-GILTDNGI-AI-EGPE------FR--EK------------- 715 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~-Gi~~~~~~-~~-~g~~------~~--~~------------- 715 (840)
.+.+.++++|++|+++| .++++||++...+..+.+++ ++...++. +. .|+. +. .+
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l~~~I~~nGa~i~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~ 101 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLDINMICYHGACSKINGQIVYNNGSDRFLGVFDRIYEDTRSWVS 101 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSSCEEEEGGGTEEEETTEEEECTTGGGGHHHHHHHHHHHTTHHH
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccchheEEECCEEEeeCCeeeecccccccchhhHHHHHHHHHHHh
Confidence 56788999999999999 99999999999998887665 11112221 11 1211 00 00
Q ss_pred ------------------------CHH---HHhhhc---CCceEEE-----ecCc--ccHHHHHHHHHHhCCCEEEEEcC
Q 003189 716 ------------------------SDE---ELSKLI---PKIQVMA-----RSSP--MDKHTLVKHLRTTLGEVVAVTGD 758 (840)
Q Consensus 716 ------------------------~~~---~~~~~~---~~~~v~a-----r~~P--~~K~~~V~~l~~~~g~~v~~~GD 758 (840)
.++ ++.+.+ +.+.+.. ...| .+|...++.|.+.+| |+++||
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~g--via~GD 179 (239)
T 1u02_A 102 DFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVRGERP--AIIAGD 179 (239)
T ss_dssp HSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHHHTCEEEECSSEEEEECTTCCHHHHHHHHHTTSC--EEEEES
T ss_pred hCCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhccCCcEEEeCCcEEEEEcCCCCHHHHHHHHHhhCC--eEEEeC
Confidence 001 011101 1232221 2223 489999999998878 889999
Q ss_pred CccCHHHhhhC--CccEEecCCCcHHHHhhcCEEecc-CCchHHHHHHH
Q 003189 759 GTNDAPALHEA--DIGLAMGIAGTEVAKESADVIILD-DNFSTIVTVAK 804 (840)
Q Consensus 759 G~ND~~al~~A--dvgiamg~~g~~~ak~~aDivlld-d~f~~i~~~i~ 804 (840)
+.||.+||+.| ++||||| ++ ++.||+++.+ .+-..+.++++
T Consensus 180 ~~ND~~Ml~~a~~g~~vam~-Na----~~~A~~v~~~~~~~~gV~~~l~ 223 (239)
T 1u02_A 180 DATDEAAFEANDDALTIKVG-EG----ETHAKFHVADYIEMRKILKFIE 223 (239)
T ss_dssp SHHHHHHHHTTTTSEEEEES-SS----CCCCSEEESSHHHHHHHHHHHH
T ss_pred CCccHHHHHHhhCCcEEEEC-CC----CCcceEEeCCCCCHHHHHHHHH
Confidence 99999999999 9999999 65 6789999876 55666666654
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.46 E-value=1.2e-06 Score=93.67 Aligned_cols=69 Identities=25% Similarity=0.279 Sum_probs=60.7
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEec-cCCchHHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIIL-DDNFSTIVTVAKW 805 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivll-dd~f~~i~~~i~~ 805 (840)
.+|...++.+.+.+| +.++++||+.||.+|++.|++|++|| ++.+..|+.||+++. +.+-.+|.++++.
T Consensus 223 ~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~~dGVa~~l~~ 295 (301)
T 2b30_A 223 HDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLKK 295 (301)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHH
T ss_pred CCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEc-CCcHHHHhhCCEEEccCCCCcHHHHHHHH
Confidence 489999999887766 46899999999999999999999999 888888999999998 8788888887753
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=5.2e-07 Score=93.41 Aligned_cols=68 Identities=15% Similarity=0.133 Sum_probs=58.9
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhh-------cCEEeccCCchHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKES-------ADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~-------aDivlldd~f~~i~~~i~ 804 (840)
.+|...++.+.+.+| +.++++||+.||.+|++.|++|++|| ++.+..|+. ||++..+.+-.++.++++
T Consensus 161 ~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~-na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~ 238 (244)
T 1s2o_A 161 SNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEc-CCcHHHHHHHhcccccceeecCCcchhHHHHHHH
Confidence 489999999988766 56899999999999999999999999 888888885 889988777777887765
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.42 E-value=9.9e-07 Score=89.95 Aligned_cols=105 Identities=20% Similarity=0.165 Sum_probs=78.3
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC--CCccccChhhhcCCHHHHhhhcCCceEEEe-----
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFREKSDEELSKLIPKIQVMAR----- 732 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar----- 732 (840)
+++|++.+.++.|++.|+++.++||.....+..+++.+|+..- +.....+. ....+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----------------~~~g~~~~~~ 154 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDG-----------------RYTGRIEGTP 154 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETT-----------------EEEEEEESSC
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECC-----------------EEeeeecCCC
Confidence 4799999999999999999999999999999999999998521 00000000 01111
Q ss_pred cCcccHHHHHHHHHHhCC------CEEEEEcCCccCHHHhhhCCccEEecCCCcHH
Q 003189 733 SSPMDKHTLVKHLRTTLG------EVVAVTGDGTNDAPALHEADIGLAMGIAGTEV 782 (840)
Q Consensus 733 ~~P~~K~~~V~~l~~~~g------~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ 782 (840)
..+..|...++.+.+..| +.+.|+||+.||.+|++.|++++++. ...+.
T Consensus 155 ~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~-~~~~l 209 (232)
T 3fvv_A 155 SFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN-PSPGL 209 (232)
T ss_dssp SSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES-CCHHH
T ss_pred CcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC-cCHHH
Confidence 123568777777655546 67999999999999999999999996 44433
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.42 E-value=1.1e-06 Score=92.22 Aligned_cols=68 Identities=32% Similarity=0.455 Sum_probs=59.7
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
.+|...++.+.+.+| +.++++||+.||.+|++.|++|++|| ++.+..++.||+++.+.+-.++.++++
T Consensus 189 ~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 189 VDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp CCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred CChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEec-CCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 489999999887655 56899999999999999999999999 788888999999998878888887764
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=7e-07 Score=93.24 Aligned_cols=65 Identities=20% Similarity=0.244 Sum_probs=56.0
Q ss_pred ccHHHHHHHHHHhCC-----CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG-----EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g-----~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
.+|...++.+.+++| +.++++||+.||.+|++.|++|++|| ++.+ . .++++..+++-.++.++++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~-~--~~~~~~~~~~~~gv~~~~~ 244 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVG-RGDP-P--EGVLATPAPGPEGFRYAVE 244 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECS-SSCC-C--TTCEECSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeC-Chhh-c--CCcEEeCCCCchHHHHHHH
Confidence 689999999988776 67999999999999999999999999 7777 3 7889888777777776664
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.40 E-value=4.8e-07 Score=91.87 Aligned_cols=125 Identities=14% Similarity=0.069 Sum_probs=92.4
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+......++.+.+.. .+..|.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~--------------------~~kp~~ 150 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVS--------------------YGKPDP 150 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGGGSS--------------------CCTTST
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeeccccCC--------------------CCCCCh
Confidence 457899999999999999999999999999999999999865333333332211 122334
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCc---cEEecCCCcHHHHhh-cCEEeccCCchHHHHHHHHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI---GLAMGIAGTEVAKES-ADVIILDDNFSTIVTVAKWG 806 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Adv---giamg~~g~~~ak~~-aDivlldd~f~~i~~~i~~g 806 (840)
..++.+.+++| +.++++||+.||.+|++.|++ ++++|.+..+..++. ||+++. ++..+..+++..
T Consensus 151 ~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~--~~~el~~~l~~~ 222 (233)
T 3s6j_A 151 DLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYE--DPLDLLNHLDEI 222 (233)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEES--SHHHHHHTGGGT
T ss_pred HHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEEC--CHHHHHHHHHHH
Confidence 55555555545 569999999999999999999 777774555555554 999984 588888877543
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.40 E-value=2.6e-06 Score=90.44 Aligned_cols=68 Identities=32% Similarity=0.414 Sum_probs=59.4
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
.+|...++.+.+.+| +.++++||+.||.+|++.|++|++|| ++.+..|+.||+++.+.+-.++.++++
T Consensus 215 ~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-~~~~~~~~~a~~v~~~~~~dGVa~~i~ 285 (288)
T 1nrw_A 215 ASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMK 285 (288)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEc-CCCHHHHhhCceeecCCCcChHHHHHH
Confidence 368888888887766 46899999999999999999999999 888888999999998877788888775
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.38 E-value=5.7e-07 Score=91.34 Aligned_cols=129 Identities=19% Similarity=0.275 Sum_probs=89.9
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccCh-hhhcCCHHHHhhhcCCceEEEec-----
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGP-EFREKSDEELSKLIPKIQVMARS----- 733 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~v~ar~----- 733 (840)
++.|++.++++.|+++|+++.++|+.+...+..+.+.+|+.... .+... .+. ..-.+.+.-
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~--~f~~~~~~~-----------~~~~~~~~~~~~~~ 152 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VFANRLKFY-----------FNGEYAGFDETQPT 152 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EEEECEEEC-----------TTSCEEEECTTSGG
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCccc--EEeeeEEEc-----------CCCcEecCCCCCcc
Confidence 68899999999999999999999999999999999999986310 00000 000 000011211
Q ss_pred -CcccHHHHHHHHHHhCC-CEEEEEcCCccCHHHhhhCCccEEecCCC-cHHHHhhcCEEeccCCchHHHHHH
Q 003189 734 -SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGLAMGIAG-TEVAKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 734 -~P~~K~~~V~~l~~~~g-~~v~~~GDG~ND~~al~~Advgiamg~~g-~~~ak~~aDivlldd~f~~i~~~i 803 (840)
.+..|...++.+.+++| +.+.|+||+.||.++.+.|+++|++|... .+.....+|+++. ++..+..++
T Consensus 153 ~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 223 (225)
T 1nnl_A 153 AESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVELLGEL 223 (225)
T ss_dssp GSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGGGCC--
T ss_pred cCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeec--CHHHHHHHH
Confidence 12367777777666546 67999999999999999999988887322 2344567999884 477765544
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.36 E-value=1.2e-06 Score=92.52 Aligned_cols=143 Identities=17% Similarity=0.138 Sum_probs=79.3
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCcc-----CCC-ccc-cC--h---hh--h--cCCHHHHh---
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT-----DNG-IAI-EG--P---EF--R--EKSDEELS--- 721 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~-----~~~-~~~-~g--~---~~--~--~~~~~~~~--- 721 (840)
+-+.++++|++|+++|++++++||+....+..+.+++|+.. .++ .+. .+ + .+ . .++.+...
T Consensus 27 ~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 106 (275)
T 1xvi_A 27 DWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLVL 106 (275)
T ss_dssp SCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTTCTTSTTTTEEECSSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEecCcccccCceEEEecCCCHHHHHHHH
Confidence 44678999999999999999999999999999999998753 122 222 21 1 00 0 01111000
Q ss_pred ----------------------------------------------------------hhcC--CceEEE-----ecCc-
Q 003189 722 ----------------------------------------------------------KLIP--KIQVMA-----RSSP- 735 (840)
Q Consensus 722 ----------------------------------------------------------~~~~--~~~v~a-----r~~P- 735 (840)
+.+. .+.+.. ...|
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~leI~~~ 186 (275)
T 1xvi_A 107 NTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWHVLDA 186 (275)
T ss_dssp HHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCHHHHHHHHHHHHHTTEEEEECSSCEEEEET
T ss_pred HHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHhhccCceeEecCCHHHHHHHHHHHHhhCeEEEECCceEEEecC
Confidence 0000 011110 1112
Q ss_pred -ccHHHHHHHHHHhCC----CE--EEEEcCCccCHHHhhhCCccEEecCCCc---HHHHhh--cC-EEeccCCchHHHHH
Q 003189 736 -MDKHTLVKHLRTTLG----EV--VAVTGDGTNDAPALHEADIGLAMGIAGT---EVAKES--AD-VIILDDNFSTIVTV 802 (840)
Q Consensus 736 -~~K~~~V~~l~~~~g----~~--v~~~GDG~ND~~al~~Advgiamg~~g~---~~ak~~--aD-ivlldd~f~~i~~~ 802 (840)
.+|...++.+.+.+| +. ++++||+.||.+|++.|++|++|| ++. +..++. || ++..+++-.++.++
T Consensus 187 ~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~ 265 (275)
T 1xvi_A 187 SAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVK-GLNREGVHLHDEDPARVWRTQREGPEGWREG 265 (275)
T ss_dssp TCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECC-CCC----------------------------
T ss_pred CCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEec-CCCccchhhccccCCceeEccCCCchHHHHH
Confidence 478888888776545 34 899999999999999999999999 776 455543 78 88877777777777
Q ss_pred HH
Q 003189 803 AK 804 (840)
Q Consensus 803 i~ 804 (840)
++
T Consensus 266 l~ 267 (275)
T 1xvi_A 266 LD 267 (275)
T ss_dssp --
T ss_pred HH
Confidence 64
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.34 E-value=9.6e-07 Score=88.95 Aligned_cols=117 Identities=18% Similarity=0.279 Sum_probs=84.8
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH-
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK- 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K- 738 (840)
++.|++.+.++.|++.|+++.++|+........+.+.+|+......++.+. ..+..|
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~----------------------~~~~~kp 151 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAE----------------------KLPYSKP 151 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECT----------------------TSSCCTT
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEecc----------------------ccCCCCC
Confidence 457899999999999999999999999988888889988864222222111 112222
Q ss_pred -HHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEe----cCCCcHHHHhhcCEEeccCCchHHHH
Q 003189 739 -HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAM----GIAGTEVAKESADVIILDDNFSTIVT 801 (840)
Q Consensus 739 -~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiam----g~~g~~~ak~~aDivlldd~f~~i~~ 801 (840)
...++.+.+++| +.++++||+.||.+|++.|+++++| + ++.+..+..||+++. ++..+..
T Consensus 152 ~~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~~~~~~~a~~v~~--~~~el~~ 219 (226)
T 1te2_A 152 HPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPE-AQNDPRFVLANVKLS--SLTELTA 219 (226)
T ss_dssp STHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTT-TTTCGGGGGSSEECS--CGGGCCH
T ss_pred ChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCC-CcccccccccCeEEC--CHHHHhH
Confidence 444554444334 5689999999999999999999999 5 444455788999984 3665544
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.32 E-value=7.3e-07 Score=94.64 Aligned_cols=132 Identities=19% Similarity=0.159 Sum_probs=92.8
Q ss_pred CCCcchHHHHHHHHhC-CCEEEEEcCC---------------------CHHHHHHHHHHcCCccCCCccccChhhhcCCH
Q 003189 660 PMRPGVKESVAICRSA-GITVRMVTGD---------------------NINTAKAIARECGILTDNGIAIEGPEFREKSD 717 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~a-Gi~v~m~TGD---------------------~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~ 717 (840)
..++++.+.++.+++. |+++.+.|.. ....+..+.+..|+... +.......
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~~~---- 194 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVN---INRCNPLA---- 194 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEE---EEECCGGG----
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEE---EEEccccc----
Confidence 4678999999999988 9998888876 34455555666665321 00000000
Q ss_pred HHHhhhcCCceEEEecCc--ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEec
Q 003189 718 EELSKLIPKIQVMARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIIL 792 (840)
Q Consensus 718 ~~~~~~~~~~~v~ar~~P--~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivll 792 (840)
.-+....+....| ..|...++.+.+++| +.++++||+.||.+|++.|++|++|| ++.+..++.||+++.
T Consensus 195 -----~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~-~~~~~~~~~a~~v~~ 268 (289)
T 3gyg_A 195 -----GDPEDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLK-NATQEAKNLHNLITD 268 (289)
T ss_dssp -----TCCTTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TCCHHHHHHCCCBCS
T ss_pred -----cCCCCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEEC-CccHHHHHhCCEEcC
Confidence 0000012333333 578888888877656 56899999999999999999999999 888889999999998
Q ss_pred cCCchHHHHHHH
Q 003189 793 DDNFSTIVTVAK 804 (840)
Q Consensus 793 dd~f~~i~~~i~ 804 (840)
+.+-.++.++++
T Consensus 269 ~~~~~gv~~~~~ 280 (289)
T 3gyg_A 269 SEYSKGITNTLK 280 (289)
T ss_dssp SCHHHHHHHHHH
T ss_pred CCCcCHHHHHHH
Confidence 777777777765
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.31 E-value=8.2e-07 Score=89.34 Aligned_cols=110 Identities=14% Similarity=0.113 Sum_probs=78.3
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++.|+++.++|++ ..+..+.+.+|+......++.+.+.. ...| |.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~~~~~~~~------------------~~Kp--~~ 148 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVA------------------ASKP--AP 148 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEECCTTTSS------------------SCTT--SS
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceEeccccCC------------------CCCC--Ch
Confidence 46799999999999999999999998 45566778888764322222222210 1112 22
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEecc
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILD 793 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlld 793 (840)
..++.+.+++| +.+.++||+.||.+|++.|+++++|+ ++.+..+ .||+++.+
T Consensus 149 ~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~-~~~~~~~-~a~~v~~~ 203 (221)
T 2wf7_A 149 DIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGV-GRPEDLG-DDIVIVPD 203 (221)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEE-SCHHHHC-SSSEEESS
T ss_pred HHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEE-CCHHHhc-cccchhcC
Confidence 34444433334 56899999999999999999999999 6676667 89999854
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.28 E-value=1.4e-06 Score=90.88 Aligned_cols=123 Identities=20% Similarity=0.254 Sum_probs=85.6
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC-CccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
++.|++.+.++.|++.|+++.++|++....+..+.+.+|+.... ..++.++... ....|
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------------------~~kp~ 162 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVP--------------------AGRPY 162 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSS--------------------CCTTS
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheecCCccC--------------------CCCCC
Confidence 46799999999999999999999999998888888888765321 2233222210 01123
Q ss_pred HHHHHHHHHhCC----CEEEEEcCCccCHHHhhhCC---ccEEecCCC------------------------cHHHHhh-
Q 003189 739 HTLVKHLRTTLG----EVVAVTGDGTNDAPALHEAD---IGLAMGIAG------------------------TEVAKES- 786 (840)
Q Consensus 739 ~~~V~~l~~~~g----~~v~~~GDG~ND~~al~~Ad---vgiamg~~g------------------------~~~ak~~- 786 (840)
...++.+.+++| +.++++||+.||.+|++.|+ +++++| ++ .+..++.
T Consensus 163 ~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (267)
T 1swv_A 163 PWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILG-SSELGLTEEEVENMDSVELREKIEVVRNRFVENG 241 (267)
T ss_dssp SHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTT-CTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCC-CCccCccHHHHhhchhhhhhhhhhhHHHHHHhcC
Confidence 333343333323 56999999999999999999 677777 44 2333444
Q ss_pred cCEEeccCCchHHHHHHHH
Q 003189 787 ADVIILDDNFSTIVTVAKW 805 (840)
Q Consensus 787 aDivlldd~f~~i~~~i~~ 805 (840)
||+++ +++..+..++..
T Consensus 242 ad~v~--~~~~el~~~l~~ 258 (267)
T 1swv_A 242 AHFTI--ETMQELESVMEH 258 (267)
T ss_dssp CSEEE--SSGGGHHHHHHH
T ss_pred Cceec--cCHHHHHHHHHH
Confidence 99998 458888877643
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.28 E-value=9.1e-07 Score=89.05 Aligned_cols=121 Identities=17% Similarity=0.128 Sum_probs=81.7
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHH
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~ 740 (840)
+.|++.+.++.|++.|+++.++|+........+.+.+|+......++.+.+.. .+..|..
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~k~~~~ 149 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVT--------------------HHKPDPE 149 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEECGGGCS--------------------SCTTSTH
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeeehhhcC--------------------CCCCChH
Confidence 46899999999999999999999999999999888888754322222221100 0112234
Q ss_pred HHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEe----cCCCcHHHHhh-cCEEeccCCchHHHHHHH
Q 003189 741 LVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAM----GIAGTEVAKES-ADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 741 ~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiam----g~~g~~~ak~~-aDivlldd~f~~i~~~i~ 804 (840)
.++.+.+++| +.+.++||+.||.+|++.|+++++| + +..+..++. ||+++. ++..+...++
T Consensus 150 ~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~-~~~~~l~~~~ad~v~~--~~~el~~~l~ 218 (225)
T 3d6j_A 150 GLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGM-TTAQEFQAYPYDRIIS--TLGQLISVPE 218 (225)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSS-CCTTGGGGSCCSEEES--SGGGGC----
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCC-CChHHHhhcCCCEEEC--CHHHHHHhhh
Confidence 4444444435 5688999999999999999999887 4 333334444 999884 4666665553
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.22 E-value=2.2e-06 Score=87.73 Aligned_cols=121 Identities=17% Similarity=0.184 Sum_probs=89.5
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecC--cc
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS--PM 736 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~--P~ 736 (840)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+......+ +.+... +.
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~----------------------~~~~~~~~~k 166 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYI----------------------AGSNLDGTRV 166 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEE----------------------EEECTTSCCC
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEE----------------------EeccccCCCC
Confidence 356899999999999999999999999999999999999986422222 112211 23
Q ss_pred cHHHHHHHHHHhCC----CEEEEEcCCccCHHHhhhCCc---cEEecCCCcHH-HHhhcCEEeccCCchHHHHHH
Q 003189 737 DKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADI---GLAMGIAGTEV-AKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 737 ~K~~~V~~l~~~~g----~~v~~~GDG~ND~~al~~Adv---giamg~~g~~~-ak~~aDivlldd~f~~i~~~i 803 (840)
.|...++.+.+++| +.++++||+.||..|++.|++ ++++|....+. .+..+|+++. ++..+.+++
T Consensus 167 p~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--~~~el~~~l 239 (240)
T 3sd7_A 167 NKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVE--NVESIKDIL 239 (240)
T ss_dssp CHHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEES--SSTTHHHHH
T ss_pred CCHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEEC--CHHHHHHHh
Confidence 46666666655544 358999999999999999999 77777333333 3578999985 488777654
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.22 E-value=1.5e-06 Score=88.08 Aligned_cols=122 Identities=11% Similarity=0.098 Sum_probs=88.4
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+......++.+.+.. ....|
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~--------------------~~kp~ 154 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVR--------------------LFKPH 154 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGGGTT--------------------CCTTC
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehhhcc--------------------cCCCC
Confidence 3568999999999999999999999999999999999999864322222222110 01223
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEe----cCCCcHHHHhhcCEEeccCCchHHHHHH
Q 003189 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAM----GIAGTEVAKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 739 ~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiam----g~~g~~~ak~~aDivlldd~f~~i~~~i 803 (840)
...++.+.+++| +.+.++||+.||..|.+.|+++++| + +..+..+..+|+++. ++..+..++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~el~~~l 223 (230)
T 3um9_A 155 QKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSN-GVFDQLGVVPDIVVS--DVGVLASRF 223 (230)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTS-CCCCCSSCCCSEEES--SHHHHHHTC
T ss_pred hHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCC-CccccccCCCcEEeC--CHHHHHHHH
Confidence 444544444435 5789999999999999999999999 4 444445678999985 477776654
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.21 E-value=2e-06 Score=89.20 Aligned_cols=57 Identities=25% Similarity=0.228 Sum_probs=47.6
Q ss_pred ccHHHHHHHHHHhC---C-CEEEEEcCCccCHHHhhhCCccEEecCCCc-HHHHhhcCEEecc
Q 003189 736 MDKHTLVKHLRTTL---G-EVVAVTGDGTNDAPALHEADIGLAMGIAGT-EVAKESADVIILD 793 (840)
Q Consensus 736 ~~K~~~V~~l~~~~---g-~~v~~~GDG~ND~~al~~Advgiamg~~g~-~~ak~~aDivlld 793 (840)
.+|...++.|.+.+ + +.|+++||+.||.+||+.|++|+||| ++. +..++.||+++.+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~g-na~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVG-SLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEES-SCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeC-CCCccccchhceEEecc
Confidence 57999999987763 2 57999999999999999999999999 676 6667788887643
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.21 E-value=3.9e-06 Score=85.15 Aligned_cols=123 Identities=18% Similarity=0.190 Sum_probs=83.0
Q ss_pred CCCcchHHHHHHHHhC-CCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 660 PMRPGVKESVAICRSA-GITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~a-Gi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
++.|++.+.++.|++. |+++.++|+.....+..+.+.+|+......++.+.+.. ..|.-+
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~-------------------~~~k~~ 153 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDAL-------------------DRNELP 153 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCS-------------------SGGGHH
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcceecCCCc-------------------CccchH
Confidence 3579999999999999 99999999999999999999999864322222222110 011122
Q ss_pred HHHHHHHHHhCC-----CEEEEEcCCccCHHHhhhCC---ccEEecCCCcHHHH-h-hcCEEeccCCchHHHHHHH
Q 003189 739 HTLVKHLRTTLG-----EVVAVTGDGTNDAPALHEAD---IGLAMGIAGTEVAK-E-SADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 739 ~~~V~~l~~~~g-----~~v~~~GDG~ND~~al~~Ad---vgiamg~~g~~~ak-~-~aDivlldd~f~~i~~~i~ 804 (840)
...++.+.+++| +.+.++||+.||.+|++.|+ +++++| .+..... . .+|+++.+ +..+..++.
T Consensus 154 ~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~~~a~~v~~~--~~el~~~l~ 226 (234)
T 2hcf_A 154 HIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATG-NFTMEELARHKPGTLFKN--FAETDEVLA 226 (234)
T ss_dssp HHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCS-SSCHHHHHTTCCSEEESC--SCCHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCC-CCCHHHHHhCCCCEEeCC--HHhHHHHHH
Confidence 344444333335 57899999999999999999 556666 3333323 2 38998843 666666553
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.20 E-value=1e-06 Score=90.97 Aligned_cols=123 Identities=21% Similarity=0.283 Sum_probs=83.6
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCc--c
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP--M 736 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P--~ 736 (840)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.+.+.. ...| .
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~------------------~~Kp~~~ 174 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLP------------------EIKPHPA 174 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSS------------------SCTTSSH
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEecccCC------------------CCCcCHH
Confidence 3577999999999999999999999999999999999999864322333332211 1122 2
Q ss_pred cHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEe---cCC-CcHHHHhhcCEEeccCCchHHHHH
Q 003189 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM---GIA-GTEVAKESADVIILDDNFSTIVTV 802 (840)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiam---g~~-g~~~ak~~aDivlldd~f~~i~~~ 802 (840)
--..+.+.+.-. .+.++|+||+.||.+|++.|++++++ |.. +.+..+..+|+++. ++..+..+
T Consensus 175 ~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~--~~~el~~~ 241 (243)
T 2hsz_A 175 PFYYLCGKFGLY-PKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADILKI 241 (243)
T ss_dssp HHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGGGG
T ss_pred HHHHHHHHhCcC-hhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEEC--CHHHHHHH
Confidence 222233333222 35789999999999999999988443 211 23445678999984 47666543
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.20 E-value=4e-06 Score=85.01 Aligned_cols=121 Identities=12% Similarity=0.152 Sum_probs=85.7
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCC---HHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCccc
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDN---INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~---~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (840)
+.|++.+.++.|++.|+++.++|+.. ......+.+.+|+...-..++.+.+.. ...|
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------------------~~kp-- 159 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVL------------------SYKP-- 159 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHT------------------CCTT--
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccccC------------------CCCC--
Confidence 47999999999999999999999999 888888999999864322222221111 0112
Q ss_pred HHHHHHHHHHhCC---CEEEEEcCCc-cCHHHhhhCCccEEe---cCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 738 KHTLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIGLAM---GIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 738 K~~~V~~l~~~~g---~~v~~~GDG~-ND~~al~~Advgiam---g~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
|..+++.+.+++| +.++++||+. ||.+|++.|+++++| | +..+..+..+|+++ +++..+..+++
T Consensus 160 ~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~-~~~~~~~~~~~~~~--~~~~el~~~l~ 230 (235)
T 2om6_A 160 RKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQE-GDKVRKLEERGFEI--PSIANLKDVIE 230 (235)
T ss_dssp CHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTT-CCSCEEEETTEEEE--SSGGGHHHHHH
T ss_pred CHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCC-CCCcccCCCCcchH--hhHHHHHHHHH
Confidence 3344444444445 6789999999 999999999999999 5 33333345588877 45888877653
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.19 E-value=1.8e-06 Score=87.76 Aligned_cols=123 Identities=9% Similarity=0.033 Sum_probs=90.0
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+......++.+.+.. .+.-|.
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~--------------------~~kp~~ 158 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVR--------------------LYKTAP 158 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGGTT--------------------CCTTSH
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecccC--------------------CCCcCH
Confidence 467899999999999999999999999999999999999864332222222111 011223
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEe----cCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAM----GIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiam----g~~g~~~ak~~aDivlldd~f~~i~~~i~~ 805 (840)
.+++.+.+++| +.+.++||+.||..|.+.|+++++| + ++.+..+..+|+++. ++..+..++..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~-~~~~~~~~~~~~v~~--~~~el~~~l~~ 228 (233)
T 3umb_A 159 AAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLG-HPPEALDVAPAAAGH--DMRDLLQFVQA 228 (233)
T ss_dssp HHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTC-CCCCSSSCCCSEEES--SHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCC-CCchhccCCCCEEEC--CHHHHHHHHHH
Confidence 33333333324 6789999999999999999999999 5 455555677999984 58888887764
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.18 E-value=3.9e-06 Score=85.32 Aligned_cols=117 Identities=15% Similarity=0.174 Sum_probs=75.0
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++.|+++.++|+... +..+.+.+|+......++.+.+.. ...-.|.--.
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~~~~~~~----------------~~Kp~~~~~~ 153 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIVDPTTLA----------------KGKPDPDIFL 153 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEECCC-------------------------CCHHH
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEeeHhhCC----------------CCCCChHHHH
Confidence 3689999999999999999999999754 777888999865333333332210 0111122222
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHH
Q 003189 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTI 799 (840)
Q Consensus 740 ~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i 799 (840)
.+.+.+.-. .+.++|+||+.||..|.+.|+++++|. +..+..+ .||+++.+ +..+
T Consensus 154 ~~~~~lgi~-~~~~i~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~-~ad~v~~s--~~el 208 (233)
T 3nas_A 154 TAAAMLDVS-PADCAAIEDAEAGISAIKSAGMFAVGV-GQGQPML-GADLVVRQ--TSDL 208 (233)
T ss_dssp HHHHHHTSC-GGGEEEEECSHHHHHHHHHTTCEEEEC-C--------CSEECSS--GGGC
T ss_pred HHHHHcCCC-HHHEEEEeCCHHHHHHHHHcCCEEEEE-CCccccc-cCCEEeCC--hHhC
Confidence 333333222 267899999999999999999999998 5555555 89999854 4444
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.17 E-value=6.2e-06 Score=83.68 Aligned_cols=122 Identities=16% Similarity=0.158 Sum_probs=88.7
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
-++.|++.+.++.|++. +++.++|+.....+..+.+.+|+......++.+.+.. . +.-|
T Consensus 99 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~------------------~--~kp~ 157 (234)
T 3u26_A 99 GELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAG------------------F--FKPH 157 (234)
T ss_dssp CCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHHHHT------------------B--CTTS
T ss_pred CCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcceeEeccccC------------------C--CCcC
Confidence 35679999999999999 9999999999999999999999864322222221110 0 1122
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCc-cCHHHhhhCC---ccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 739 HTLVKHLRTTLG---EVVAVTGDGT-NDAPALHEAD---IGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 739 ~~~V~~l~~~~g---~~v~~~GDG~-ND~~al~~Ad---vgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
..+++.+.+++| +.+.++||+. ||..|.+.|+ +++++| ++.+..++.+|+++. ++..+..+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~a~~~~~--~~~el~~~l~ 227 (234)
T 3u26_A 158 PRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRK-GEKREFWDKCDFIVS--DLREVIKIVD 227 (234)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSS-STTGGGGGGCSEEES--STHHHHHHHH
T ss_pred HHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCC-CCccccccCCCEeeC--CHHHHHHHHH
Confidence 334444333335 6799999997 9999999999 678888 666666779999984 4888887764
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.13 E-value=2e-06 Score=94.83 Aligned_cols=110 Identities=16% Similarity=0.184 Sum_probs=74.7
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCcc--CCCccccChhhhcCCHHHHhhhcCCceEEEe----
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT--DNGIAIEGPEFREKSDEELSKLIPKIQVMAR---- 732 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar---- 732 (840)
-.++|++++.|+.|+++|++|+++||.....++.+|+++|+.. +...|+ |..+....+ -....+
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vi-g~~l~~~~d---------G~~tg~~~~~ 289 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVL-GLRLMKDDE---------GKILPKFDKD 289 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEE-EECEEECTT---------CCEEEEECTT
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEE-EeEEEEecC---------CceeeeecCc
Confidence 4578999999999999999999999999999999999998632 111222 111111000 012222
Q ss_pred ---cCcccHHHHHHHHHHh-CC-CEEEEEcCCccCHHHhhh-CCccEEecCC
Q 003189 733 ---SSPMDKHTLVKHLRTT-LG-EVVAVTGDGTNDAPALHE-ADIGLAMGIA 778 (840)
Q Consensus 733 ---~~P~~K~~~V~~l~~~-~g-~~v~~~GDG~ND~~al~~-Advgiamg~~ 778 (840)
+..+.|...|+.+... .| ..++++|||.||.|||++ +|.++.+.++
T Consensus 290 ~p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~liin 341 (385)
T 4gxt_A 290 FPISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSLIIH 341 (385)
T ss_dssp SCCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEEEEC
T ss_pred cceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEEEEc
Confidence 2345698888876422 12 346778999999999986 6666666443
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.12 E-value=1.8e-06 Score=86.06 Aligned_cols=120 Identities=14% Similarity=0.162 Sum_probs=84.8
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+......++.+.+.. ...| |.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------------------~~kp--~~ 148 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFK------------------ESKP--NP 148 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGCS------------------SCTT--SS
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeeccccc------------------CCCC--Ch
Confidence 468999999999999999999999999999999999999865322232222211 0111 23
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCC-cHHHHhhcCEEeccCCchHHHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAG-TEVAKESADVIILDDNFSTIVT 801 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g-~~~ak~~aDivlldd~f~~i~~ 801 (840)
..++.+.+++| +.++++||+.||.+|.+.|+++++|...+ ....+..+|+++. ++..+.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~--~~~el~~ 212 (214)
T 3e58_A 149 EIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLD--SLTDVLD 212 (214)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEES--SGGGGGG
T ss_pred HHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHH--HHHHHHh
Confidence 33333333324 56899999999999999999998886433 3334477999984 4666543
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=98.10 E-value=2.5e-06 Score=87.53 Aligned_cols=139 Identities=14% Similarity=0.136 Sum_probs=90.7
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhh--hcCCceEEEecCcc
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSK--LIPKIQVMARSSPM 736 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~v~ar~~P~ 736 (840)
-+++|++.+.++.|+++|+++.++|+.+...+..+.+ |+... ..++.+..... ...+.. .-|+-..+.+..+.
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~~--~~~~~~~~~kp~p~~~~~~~~~ 150 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASFD--NDYIHIDWPHSCKGTCSNQCGC 150 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEECS--SSBCEEECTTCCCTTCCSCCSS
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEEc--CCceEEecCCCCccccccccCC
Confidence 3678999999999999999999999999988888887 76432 23332222110 000000 00000000011245
Q ss_pred cHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhh--cCEEeccCCchHHHHHHHHH
Q 003189 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKES--ADVIILDDNFSTIVTVAKWG 806 (840)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~--aDivlldd~f~~i~~~i~~g 806 (840)
+|..+++.+... .+.+.|+||+.||.++.+.|++.++.+ ...+..++. +|+++ +++..+..++...
T Consensus 151 ~K~~~~~~~~~~-~~~~~~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~~--~~~~el~~~l~~~ 218 (236)
T 2fea_A 151 CKPSVIHELSEP-NQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLPY--QDFYEIRKEIENV 218 (236)
T ss_dssp CHHHHHHHHCCT-TCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEECC--SSHHHHHHHHHTS
T ss_pred cHHHHHHHHhcc-CCeEEEEeCChHHHHHHHhCCeeeech-HHHHHHHHCCCCeeec--CCHHHHHHHHHHh
Confidence 688888888655 678999999999999999999988753 222233333 67776 4599888877543
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.09 E-value=6.1e-06 Score=86.12 Aligned_cols=124 Identities=15% Similarity=0.046 Sum_probs=86.5
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC-CCccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD-NGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.+.. ....|
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------------------~~kp~ 170 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVV--------------------RGRPF 170 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGGGSS--------------------SCTTS
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHHhcC--------------------CCCCC
Confidence 5678999999999999999999999999999999998887543 22222222210 11223
Q ss_pred HHHHHHHHHhCC----CEEEEEcCCccCHHHhhhCC---ccEEecCC-----------------------CcHHHH-hhc
Q 003189 739 HTLVKHLRTTLG----EVVAVTGDGTNDAPALHEAD---IGLAMGIA-----------------------GTEVAK-ESA 787 (840)
Q Consensus 739 ~~~V~~l~~~~g----~~v~~~GDG~ND~~al~~Ad---vgiamg~~-----------------------g~~~ak-~~a 787 (840)
...++.+.+++| +.+.|+||+.||..|.+.|+ |+|++|.+ ..+..+ ..+
T Consensus 171 ~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a 250 (277)
T 3iru_A 171 PDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGA 250 (277)
T ss_dssp SHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCC
Confidence 344444433333 56899999999999999999 56777732 123333 449
Q ss_pred CEEeccCCchHHHHHHHH
Q 003189 788 DVIILDDNFSTIVTVAKW 805 (840)
Q Consensus 788 Divlldd~f~~i~~~i~~ 805 (840)
|+++ +++..+..++..
T Consensus 251 d~v~--~~~~el~~~l~~ 266 (277)
T 3iru_A 251 HYVI--DSVADLETVITD 266 (277)
T ss_dssp SEEE--SSGGGTHHHHHH
T ss_pred CEEe--cCHHHHHHHHHH
Confidence 9998 458888887754
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.08 E-value=3.8e-06 Score=85.24 Aligned_cols=123 Identities=17% Similarity=0.124 Sum_probs=84.3
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.+.+.. .+..|
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~--------------------~~Kp~ 141 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFG--------------------EKKPS 141 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTSSC--------------------TTCCT
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecCcCC--------------------CCCCC
Confidence 3568999999999999999999999999999999999999864322222222110 11223
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc-EEecC-CCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG-LAMGI-AGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 739 ~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg-iamg~-~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
...++.+.+++| +.++++||+.||.+|.+.|++. |++.. .+.... ..+|+++. ++..+..++.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~--~~~el~~~l~ 209 (222)
T 2nyv_A 142 PTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLS--RPSDLVKLMD 209 (222)
T ss_dssp THHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEES--STTHHHHHHH
T ss_pred hHHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEEC--CHHHHHHHHH
Confidence 333333322223 5789999999999999999987 55531 222212 56898884 5888877664
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.08 E-value=8.3e-06 Score=85.04 Aligned_cols=143 Identities=24% Similarity=0.295 Sum_probs=88.9
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCH------HHHH-HHHHHcCCccCCCcc---ccChhhhc----CCHH---HHhhh
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNI------NTAK-AIARECGILTDNGIA---IEGPEFRE----KSDE---ELSKL 723 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~------~ta~-~iA~~~Gi~~~~~~~---~~g~~~~~----~~~~---~~~~~ 723 (840)
.++.+.+.++.+++.|+.+.+.|++.. .... ..-..+++....... .....+.. ..++ ++.+.
T Consensus 86 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 165 (261)
T 2rbk_A 86 PQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFITEEEEKEVLPS 165 (261)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEECCCHHHHHHHGGG
T ss_pred CHHHHHHHHHHHHHcCCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCccccchhccCceeEEEEEeCHHHHHHHHHh
Confidence 357789999999999999888887764 1111 111222320000000 00000000 0121 23333
Q ss_pred cCCceEEE--------ecCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEec
Q 003189 724 IPKIQVMA--------RSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIIL 792 (840)
Q Consensus 724 ~~~~~v~a--------r~~P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivll 792 (840)
++++.+.. -.....|...++.+.+++| +.++++||+.||.+|++.|++|++|| ++.+..++.||+++.
T Consensus 166 ~~~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~ 244 (261)
T 2rbk_A 166 IPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTA 244 (261)
T ss_dssp STTCEEECSSTTCCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECC
T ss_pred cCCeEEEEecCCeEEecCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEec-CccHHHHhhCCEEec
Confidence 44443321 1123589988888877655 56899999999999999999999999 888888999999987
Q ss_pred cCCchHHHHHHH
Q 003189 793 DDNFSTIVTVAK 804 (840)
Q Consensus 793 dd~f~~i~~~i~ 804 (840)
+.+-.++..+++
T Consensus 245 ~~~~dGv~~~l~ 256 (261)
T 2rbk_A 245 PIDEDGISKAMK 256 (261)
T ss_dssp CGGGTHHHHHHH
T ss_pred cCchhhHHHHHH
Confidence 655555877764
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.08 E-value=2.6e-06 Score=84.25 Aligned_cols=114 Identities=18% Similarity=0.175 Sum_probs=79.8
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH-
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK- 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K- 738 (840)
++.|++.+.++.|++.|+++.++|+....... ..+.+|+......++.+.+ ....|
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~~~~----------------------~~~~Kp 141 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILTSQS----------------------GFVRKP 141 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEECGGG----------------------CCCCTT
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEecCc----------------------CCCCCC
Confidence 46799999999999999999999999988887 8888887532111111111 11112
Q ss_pred -HHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc-EEecCCCcHHHHhhcCEEeccCCchHHHHHH
Q 003189 739 -HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG-LAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 739 -~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg-iamg~~g~~~ak~~aDivlldd~f~~i~~~i 803 (840)
...++.+.+++| +.++++||+.||.+|++.|+++ ++|+ ++. . .+|+++. ++..+.+++
T Consensus 142 ~~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~-~~~-~---~a~~v~~--~~~el~~~l 204 (207)
T 2go7_A 142 SPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFL-EST-Y---EGNHRIQ--ALADISRIF 204 (207)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESS-CCS-C---TTEEECS--STTHHHHHT
T ss_pred CcHHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEe-cCC-C---CCCEEeC--CHHHHHHHH
Confidence 233333333324 5689999999999999999997 8888 565 2 6899874 477776554
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.07 E-value=1.7e-06 Score=91.17 Aligned_cols=127 Identities=13% Similarity=0.016 Sum_probs=88.9
Q ss_pred CCCCcchHHHHHHHHhCCC--EEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcc
Q 003189 659 DPMRPGVKESVAICRSAGI--TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi--~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~ 736 (840)
-++.|++.+.++.|++.|+ ++.++|+.....+..+.+.+|+...-..++.+..... .. ..+.
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~--------------~~--~~~K 204 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRT--------------DT--LVCK 204 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSSC--------------SS--CCCT
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCCC--------------cc--cCCC
Confidence 3578999999999999999 9999999999999999999998653222222211000 00 1123
Q ss_pred cHHHHHHHHHHhCC----CEEEEEcCCccCHHHhhhCCccEEecCCCcHHH-----HhhcCEEeccCCchHHHHHH
Q 003189 737 DKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVA-----KESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 737 ~K~~~V~~l~~~~g----~~v~~~GDG~ND~~al~~Advgiamg~~g~~~a-----k~~aDivlldd~f~~i~~~i 803 (840)
.|...++.+.+++| +.+.++||+.||..|.+.|++|.+|+....... ...||+++. ++..+.+++
T Consensus 205 p~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~--sl~el~~~l 278 (282)
T 3nuq_A 205 PHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVIS--DILELPHVV 278 (282)
T ss_dssp TSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEES--SGGGGGGTS
T ss_pred cCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeC--CHHHHHHHh
Confidence 45555655544434 578999999999999999999999984433221 237889884 477776554
|
| >2l1w_B Vacuolar calcium ATPase BCA1 peptide; calmodulin, calmodulin complex, soybean calmodulin, vacuolar ATPase, metal binding protein; NMR {Glycine max} | Back alignment and structure |
|---|
Probab=98.05 E-value=6.3e-07 Score=56.54 Aligned_cols=25 Identities=60% Similarity=0.954 Sum_probs=22.9
Q ss_pred HHHHHHHhhcccccccccchhhhcc
Q 003189 21 ALQRWRKLCGFVKNRKRRFRFTANL 45 (840)
Q Consensus 21 ~~~~~r~~~~~~~~~~r~f~~~~~~ 45 (840)
+++|||+|+++++|++|||+|+++|
T Consensus 1 al~rWR~a~~~v~n~~rrfr~~~~L 25 (26)
T 2l1w_B 1 ARQRWRSSVSIVKNRARRFRMISNL 25 (26)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHC
T ss_pred CchhHHHHHHHHhCccccccccccc
Confidence 4799999988999999999999987
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.04 E-value=7.2e-06 Score=83.27 Aligned_cols=117 Identities=17% Similarity=0.107 Sum_probs=81.1
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH-
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK- 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K- 738 (840)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+......++ .+...+..|
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~----------------------~~~~~~~~Kp 160 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSII----------------------GSGDTGTIKP 160 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEE----------------------EETSSSCCTT
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEE----------------------cccccCCCCC
Confidence 468999999999999999999999999999999999999864222221 111122222
Q ss_pred -HHHHHHHHHhCC---C-EEEEEcCCccCHHHhhhCCc-cEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 739 -HTLVKHLRTTLG---E-VVAVTGDGTNDAPALHEADI-GLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 739 -~~~V~~l~~~~g---~-~v~~~GDG~ND~~al~~Adv-giamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
...++.+.+++| + .+.++||+.||..|.+.|++ ++.|+ ++.+ ..+|.++. +|..+.+++.
T Consensus 161 ~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~-~~~~---~~~~~~~~--~~~el~~~l~ 226 (231)
T 3kzx_A 161 SPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYG-STNI---IKDILSFK--NFYDIRNFIC 226 (231)
T ss_dssp SSHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEEC-C--------CCEEES--SHHHHHHHHH
T ss_pred ChHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEEC-CCCC---CCCceeeC--CHHHHHHHHH
Confidence 233333323324 4 78999999999999999997 77777 5444 35788774 4888877654
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.02 E-value=3.4e-05 Score=78.98 Aligned_cols=122 Identities=16% Similarity=0.096 Sum_probs=84.3
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+......++.+.+.. .+..|.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~--------------------~~Kp~~ 153 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEG--------------------VKKPHP 153 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGGT--------------------CCTTCH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEeCCCC--------------------CCCCCH
Confidence 467999999999999999999999999998999999999864322222222110 011122
Q ss_pred HHHHHHHHhCC---CEEEEEcCCc-cCHHHhhhCCccEEe---cCCCcHHHHh---hcCEEeccCCchHHHHHHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIGLAM---GIAGTEVAKE---SADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~-ND~~al~~Advgiam---g~~g~~~ak~---~aDivlldd~f~~i~~~i~ 804 (840)
.+++.+.+++| +.+.++||+. ||..|.+.|+++.+. | .+...... .+|+++. ++..+...+.
T Consensus 154 ~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g-~~~~~~~~~~~~~~~~i~--~~~el~~~l~ 225 (241)
T 2hoq_A 154 KIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYG-KHSERELEYRKYADYEID--NLESLLEVLA 225 (241)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCS-CCCHHHHTTGGGCSEEES--STTHHHHHHH
T ss_pred HHHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCC-CCCcccccccCCCCEEEC--CHHHHHHHHH
Confidence 34444333324 5689999998 999999999987654 4 33333332 6899884 4888877654
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.00 E-value=1.2e-05 Score=82.33 Aligned_cols=121 Identities=17% Similarity=0.121 Sum_probs=83.1
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC--CccccChhhhcCCHHHHhhhcCCceEEEecCccc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (840)
++.|++.+.++.|++.|+++.++|+.....+....+. |+.... ..++.+.+.. .+..
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~--------------------~~kp 167 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVK--------------------YGKP 167 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCS--------------------SCTT
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCC--------------------CCCC
Confidence 5679999999999999999999999987777777777 876433 3333333211 1122
Q ss_pred HHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc-EEecCCCcHH----HHhhcCEEeccCCchHHHHHHH
Q 003189 738 KHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG-LAMGIAGTEV----AKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 738 K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg-iamg~~g~~~----ak~~aDivlldd~f~~i~~~i~ 804 (840)
|...++.+.+++| +.+.++||+.||..|.+.|+++ +.++ .+... .+..+|+++. ++..+..+++
T Consensus 168 ~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~--s~~el~~~l~ 239 (243)
T 3qxg_A 168 NPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVN-TGPLDGQVLLDAGADLLFP--SMQTLCDSWD 239 (243)
T ss_dssp SSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEEC-CSSSCHHHHHHTTCSEEES--CHHHHHHHHH
T ss_pred ChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEe-CCCCCHHHHHhcCCCEEEC--CHHHHHHHHH
Confidence 2334444444435 6789999999999999999985 4444 44322 2346999984 5888877664
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.99 E-value=4.5e-06 Score=84.87 Aligned_cols=122 Identities=10% Similarity=0.091 Sum_probs=84.5
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+......++.+.+.. .+..|.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~--------------------~~Kp~~ 154 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQ--------------------VYKPDN 154 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGT--------------------CCTTSH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEecccC--------------------CCCCCH
Confidence 467999999999999999999999999999999999999864322232222211 011222
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecC---CCcHHHHhhcCEEeccCCchHHHHHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGI---AGTEVAKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~---~g~~~ak~~aDivlldd~f~~i~~~i 803 (840)
..++.+.+++| +.+.++||+.||..|.+.|+++++|-. +..+..+..+|+++. ++..+..++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 222 (232)
T 1zrn_A 155 RVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVELF 222 (232)
T ss_dssp HHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHTTC
T ss_pred HHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEEC--CHHHHHHHH
Confidence 33333322224 568899999999999999999998832 222333556899884 477776554
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.98 E-value=2e-05 Score=80.04 Aligned_cols=120 Identities=11% Similarity=0.067 Sum_probs=87.1
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|+ .|+++.++|+.....+..+.+.+|+......++.+.+.. ....|.
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~~~~~~--------------------~~kp~~ 165 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLG--------------------VLKPRP 165 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGTT--------------------CCTTSH
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeEEEeccCC--------------------CCCCCH
Confidence 56789999999999 999999999999999999999999864322222222110 122344
Q ss_pred HHHHHHHHhCC---CEEEEEcCCc-cCHHHhhhCCccEEecCCCcH-HHHhhcCEEeccCCchHHHHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIGLAMGIAGTE-VAKESADVIILDDNFSTIVTV 802 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~-ND~~al~~Advgiamg~~g~~-~ak~~aDivlldd~f~~i~~~ 802 (840)
..++.+.+++| +.++++||+. ||..|.+.|+++++|...+.. ..+..+|+++.+ +..+..+
T Consensus 166 ~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~s--l~e~~~~ 231 (240)
T 3qnm_A 166 EIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHS--LKELMNL 231 (240)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESS--THHHHHH
T ss_pred HHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECC--HHHHHHH
Confidence 55555544445 6799999995 999999999999999855442 445679999844 7766544
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=7.6e-06 Score=83.77 Aligned_cols=121 Identities=11% Similarity=0.101 Sum_probs=83.0
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+......++.+.+.. .+..|.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~--------------------~~Kp~~ 164 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLK--------------------IYKPDP 164 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGTT--------------------CCTTSH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEccccC--------------------CCCCCH
Confidence 577999999999999999999999999999999999999864322222222111 011233
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc---EEecCCCcHHHHhhc-CEEeccCCchHHHHHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG---LAMGIAGTEVAKESA-DVIILDDNFSTIVTVA 803 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg---iamg~~g~~~ak~~a-Divlldd~f~~i~~~i 803 (840)
..++.+.+++| +.+.++||+.||..|.+.|++. +.+| ...+..+..+ |+++. ++..+..++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~~~~~~~~--~~~el~~~l 232 (240)
T 2no4_A 165 RIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQ-GNPPEYEFAPLKHQVN--SLSELWPLL 232 (240)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTT-CCCCCCTTSCCSEEES--SGGGHHHHH
T ss_pred HHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCC-CCCCcccCCCCceeeC--CHHHHHHHH
Confidence 34443333324 5688999999999999999955 4445 2233334557 99884 488877654
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.98 E-value=7.2e-06 Score=80.07 Aligned_cols=115 Identities=15% Similarity=0.176 Sum_probs=78.6
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCH---------------HHHHHHHHHcC--CccCCCccccChhhhcCCHHHHhh
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECG--ILTDNGIAIEGPEFREKSDEELSK 722 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~---------------~ta~~iA~~~G--i~~~~~~~~~g~~~~~~~~~~~~~ 722 (840)
++.|++.++++.|+++|+++.++|+... ..+..+.+.+| +..
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~--------------------- 85 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDA--------------------- 85 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCE---------------------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeE---------------------
Confidence 5789999999999999999999999985 55666777777 322
Q ss_pred hcCCceEE-Ee-----cCc--ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCc---cEEecCCCcHHHH----
Q 003189 723 LIPKIQVM-AR-----SSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI---GLAMGIAGTEVAK---- 784 (840)
Q Consensus 723 ~~~~~~v~-ar-----~~P--~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Adv---giamg~~g~~~ak---- 784 (840)
++ +. ..+ .-+..+++.+.+++| +.+.|+||+.||..+.+.|++ ++++| .+.....
T Consensus 86 ------~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~ 158 (179)
T 3l8h_A 86 ------IFMCPHGPDDGCACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTG-NGRKTLAQGGL 158 (179)
T ss_dssp ------EEEECCCTTSCCSSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTT-THHHHHHHCCC
T ss_pred ------EEEcCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCC-Ccchhhhhccc
Confidence 22 10 001 111223333322224 678999999999999999995 77777 4444433
Q ss_pred hhcCEEeccCCchHHHHHHH
Q 003189 785 ESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 785 ~~aDivlldd~f~~i~~~i~ 804 (840)
..+|+++.+ +..+.+.+.
T Consensus 159 ~~~d~v~~~--l~el~~~l~ 176 (179)
T 3l8h_A 159 PEGTRVCED--LAAVAEQLL 176 (179)
T ss_dssp CTTEEEESS--HHHHHHHHH
T ss_pred CCCcEEecC--HHHHHHHHH
Confidence 457998854 888777654
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.96 E-value=1.1e-05 Score=82.74 Aligned_cols=120 Identities=13% Similarity=0.163 Sum_probs=81.5
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHH
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~ 740 (840)
+.|++.+.++.|++.|+++.++|+.....+..+.+.+|+. .-..++.+.+.. .+..|..
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~~~~~~~~~~--------------------~~Kp~p~ 169 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFDFALGEKSGI--------------------RRKPAPD 169 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCSEEEEECTTS--------------------CCTTSSH
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ceeEEEecCCCC--------------------CCCCCHH
Confidence 5689999999999999999999999988888888999875 322222221100 1222334
Q ss_pred HHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc---EEecCCCcHHHH-hhcCEEeccCCchHHHHHH
Q 003189 741 LVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG---LAMGIAGTEVAK-ESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 741 ~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg---iamg~~g~~~ak-~~aDivlldd~f~~i~~~i 803 (840)
++..+.+++| +.+.|+||+.||..|.+.|++. +++|....+..+ ..+|+++. ++..+...+
T Consensus 170 ~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~--~~~el~~~l 237 (240)
T 2hi0_A 170 MTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVD--TAEKLEEAI 237 (240)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEEC--SHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEEC--CHHHHHHHh
Confidence 4444333324 5799999999999999999984 555622223333 46899884 477776554
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.96 E-value=1.2e-05 Score=81.21 Aligned_cols=116 Identities=11% Similarity=0.106 Sum_probs=84.8
Q ss_pred CCCcchHHHHHHHHhCC-CEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 660 PMRPGVKESVAICRSAG-ITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aG-i~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
++.|++.+.++.|++.| +++.++|+........+.+.+|+..... .+++...| |
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~-----------------------~~~~~~kp--k 159 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFD-----------------------HIEVMSDK--T 159 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCS-----------------------EEEEESCC--S
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhh-----------------------eeeecCCC--C
Confidence 46789999999999999 9999999999988899999999854211 13343334 6
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCc-cCHHHhhhCCccEEe-------cCCCcHHHHhhc-CEEeccCCchHHHHHH
Q 003189 739 HTLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIGLAM-------GIAGTEVAKESA-DVIILDDNFSTIVTVA 803 (840)
Q Consensus 739 ~~~V~~l~~~~g---~~v~~~GDG~-ND~~al~~Advgiam-------g~~g~~~ak~~a-Divlldd~f~~i~~~i 803 (840)
...++.+.+++| +.++++||+. ||..|.+.|+++.+| | .+.+..+..+ |+++. ++..+..++
T Consensus 160 ~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g-~~~~~~~~~~~d~v~~--~l~el~~~l 233 (234)
T 3ddh_A 160 EKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWK-HEVTETFAHERLKQVK--RLDDLLSLL 233 (234)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCC-CC---CCCCTTEEECS--SGGGHHHHC
T ss_pred HHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccc-cCCcccccCCCceecc--cHHHHHHhc
Confidence 667776665545 6789999996 999999999999887 2 2222223344 88874 488777653
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.95 E-value=1.6e-05 Score=81.31 Aligned_cols=122 Identities=15% Similarity=0.091 Sum_probs=79.8
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC--CccccChhhhcCCHHHHhhhcCCceEEEecCcc
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~ 736 (840)
.++.|++.+.++.|++.|+++.++|+.....+....+. |+.... ..++.+.+.. .+.
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~--------------------~~k 165 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVK--------------------YGK 165 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCS--------------------SCT
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCC--------------------CCC
Confidence 45679999999999999999999999998877777777 876432 2333332211 111
Q ss_pred cHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc-EEecCCCcHH----HHhhcCEEeccCCchHHHHHHH
Q 003189 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG-LAMGIAGTEV----AKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 737 ~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg-iamg~~g~~~----ak~~aDivlldd~f~~i~~~i~ 804 (840)
-|...++.+.+++| +.+.++||+.||..|.+.|++. +.+. .|... .+..||+++. ++..+..++.
T Consensus 166 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~--~~~el~~~l~ 238 (247)
T 3dv9_A 166 PNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVN-TGPLHDNVLLNEGANLLFH--SMPDFNKNWE 238 (247)
T ss_dssp TSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEEC-CSSSCHHHHHTTTCSEEES--SHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEc-CCCCCHHHHHhcCCCEEEC--CHHHHHHHHH
Confidence 22233333333334 5689999999999999999965 3333 33222 2237999984 4888777664
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.94 E-value=5.8e-06 Score=85.19 Aligned_cols=119 Identities=13% Similarity=0.140 Sum_probs=79.8
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH-cCCccCCCccccCh--hhhcCCHHHHhhhcCCceEEEecCcc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-CGILTDNGIAIEGP--EFREKSDEELSKLIPKIQVMARSSPM 736 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~-~Gi~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~v~ar~~P~ 736 (840)
++.|++.+.++.|++.|+++.++|+.....+...-.+ .|+......++.+. +.. ...
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~--------------------~~K 171 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQ--------------------HGK 171 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCC--------------------SCT
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhcc--------------------CCC
Confidence 5789999999999999999999999987665543322 34432211222221 100 112
Q ss_pred cHHHHHHHHHHhCC-----CEEEEEcCCccCHHHhhhCC---ccEEecCCCcHHHHhhcCEEeccCCchHHHH
Q 003189 737 DKHTLVKHLRTTLG-----EVVAVTGDGTNDAPALHEAD---IGLAMGIAGTEVAKESADVIILDDNFSTIVT 801 (840)
Q Consensus 737 ~K~~~V~~l~~~~g-----~~v~~~GDG~ND~~al~~Ad---vgiamg~~g~~~ak~~aDivlldd~f~~i~~ 801 (840)
-|..+++.+.+++| +.++++||+.||..|.+.|+ +++++| ++.+..+..||+++. ++..+..
T Consensus 172 p~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~ad~v~~--sl~el~~ 241 (250)
T 3l5k_A 172 PDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDG-NLSRDLTTKATLVLN--SLQDFQP 241 (250)
T ss_dssp TSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCT-TSCGGGSTTSSEECS--CGGGCCG
T ss_pred CChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCC-CCchhhcccccEeec--CHHHhhH
Confidence 23344555544445 67999999999999999999 667777 555667889999984 4665543
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=3.4e-05 Score=77.70 Aligned_cols=133 Identities=18% Similarity=0.213 Sum_probs=80.5
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCC---------------HHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDN---------------INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~---------------~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~ 724 (840)
++.|++.++++.|+++|+++.++|+.. ...+..+.+++|+. -...+..+........+ ..
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-f~~~~~~~~~~~~~~~~----~~ 124 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD-LDGIYYCPHHPQGSVEE----FR 124 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC-CSEEEEECCBTTCSSGG----GB
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc-eEEEEECCcCCCCcccc----cC
Confidence 678999999999999999999999999 46777888888875 11111111000000000 00
Q ss_pred CCceEEEecCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc----EEecCCCcHHHHhhcCEEeccCCch
Q 003189 725 PKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG----LAMGIAGTEVAKESADVIILDDNFS 797 (840)
Q Consensus 725 ~~~~v~ar~~P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg----iamg~~g~~~ak~~aDivlldd~f~ 797 (840)
. ......| |..+++.+.+++| +.+.|+||+.||..+.+.|++. +..|....+.....+|+++ +++.
T Consensus 125 -~--~~~~~KP--~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi--~~l~ 197 (211)
T 2gmw_A 125 -Q--VCDCRKP--HPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLA 197 (211)
T ss_dssp -S--CCSSSTT--SCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGG
T ss_pred -c--cCcCCCC--CHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEe--CCHH
Confidence 0 0000112 1233333322224 5689999999999999999954 4444222343445699988 4588
Q ss_pred HHHHHHH
Q 003189 798 TIVTVAK 804 (840)
Q Consensus 798 ~i~~~i~ 804 (840)
.+.+++.
T Consensus 198 el~~~l~ 204 (211)
T 2gmw_A 198 DLPQAIK 204 (211)
T ss_dssp GHHHHHH
T ss_pred HHHHHHH
Confidence 8877654
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.91 E-value=3.3e-06 Score=84.42 Aligned_cols=116 Identities=13% Similarity=0.198 Sum_probs=81.6
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH-
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK- 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K- 738 (840)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+...-..++.+.+ ....|
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~----------------------~~~~KP 139 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMAVTISADD----------------------TPKRKP 139 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGG----------------------SSCCTT
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhccEEEecCc----------------------CCCCCC
Confidence 4689999999999999 99999999999999999998887532111211111 12334
Q ss_pred -HHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecC---CCcHHHHhhcCEEeccCCchHHHH
Q 003189 739 -HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGI---AGTEVAKESADVIILDDNFSTIVT 801 (840)
Q Consensus 739 -~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~---~g~~~ak~~aDivlldd~f~~i~~ 801 (840)
...++.+.+++| +.+.++||+.||.+|.+.|+++++|.. ...+..++ +|+++. ++..+..
T Consensus 140 ~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~--~~~el~~ 206 (209)
T 2hdo_A 140 DPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQ--KPLDILE 206 (209)
T ss_dssp SSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEES--SGGGGGG
T ss_pred CcHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeC--CHHHHHH
Confidence 344444433334 578999999999999999999999742 12344445 999884 3665544
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.91 E-value=3.8e-05 Score=77.92 Aligned_cols=122 Identities=11% Similarity=0.056 Sum_probs=87.7
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++. +++.++|+.....+....+.+|+......++.+.+.. ....|.
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~--------------------~~kp~~ 161 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTG--------------------FQKPMK 161 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGTT--------------------SCTTCH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheEEEecccC--------------------CCCCCh
Confidence 5678999999999999 9999999999999999999999864322222222110 112234
Q ss_pred HHHHHHHHhCC----CEEEEEcCCc-cCHHHhhhCCccEEecCCC--cHHHHhhcCEEeccCCchHHHHHHH
Q 003189 740 TLVKHLRTTLG----EVVAVTGDGT-NDAPALHEADIGLAMGIAG--TEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 740 ~~V~~l~~~~g----~~v~~~GDG~-ND~~al~~Advgiamg~~g--~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
..++.+.+++| +.++++||+. ||..|.+.|+++.++-..+ .+..+..+|+++. ++..+.+++.
T Consensus 162 ~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~--~~~el~~~l~ 231 (238)
T 3ed5_A 162 EYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIR--KLEELYHILN 231 (238)
T ss_dssp HHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEES--SGGGHHHHHT
T ss_pred HHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEEC--CHHHHHHHHH
Confidence 55555555556 5799999998 9999999999964432243 4455678999984 4888887764
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.90 E-value=1.1e-05 Score=83.50 Aligned_cols=124 Identities=14% Similarity=0.116 Sum_probs=86.5
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCc-cccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI-AIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...... ++.+.+.. ..+.-|
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~~~~~~-------------------~~~Kp~ 170 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVG-------------------GRGKPH 170 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEECGGGGT-------------------TCCTTS
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEeHhhcC-------------------cCCCCC
Confidence 4578999999999999999999999999999999999998532111 22221110 001122
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc-EEecCCC-------c-HHHHhhcCEEeccCCchHHHHHHHH
Q 003189 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG-LAMGIAG-------T-EVAKESADVIILDDNFSTIVTVAKW 805 (840)
Q Consensus 739 ~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg-iamg~~g-------~-~~ak~~aDivlldd~f~~i~~~i~~ 805 (840)
...++.+.+++| +.++++||+.||..|.+.|+++ +.+. .| . +..+..+|+++. ++..+.+++..
T Consensus 171 ~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ad~vi~--~l~el~~~l~~ 246 (259)
T 4eek_A 171 PDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLL-VPGHPHPDGAAALSRLGAARVLT--SHAELRAALAE 246 (259)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEC-CTTSCCSSCHHHHHHHTCSEEEC--SHHHHHHHHHH
T ss_pred hHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEc-cCCCcccccHHHHHhcCcchhhC--CHHHHHHHHHh
Confidence 344444444435 6799999999999999999998 4443 33 2 233455999984 59988888764
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.89 E-value=2.2e-05 Score=79.23 Aligned_cols=118 Identities=12% Similarity=0.180 Sum_probs=81.1
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC-CccccChhhhcCCHHHHhhhcCCceEEEecCc--c
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSP--M 736 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P--~ 736 (840)
++.|++.+.++.++. ++.++|+........+.+.+|+.... ..++.++.. ..+ .
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~--------------------~~~~~k 143 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDL--------------------GADRVK 143 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHH--------------------CTTCCT
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccceEEecccc--------------------ccCCCC
Confidence 456788888888774 89999999999999999999986421 222222110 011 2
Q ss_pred cHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc-EEecCCCcH-------HHHhh-cCEEeccCCchHHHHHH
Q 003189 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG-LAMGIAGTE-------VAKES-ADVIILDDNFSTIVTVA 803 (840)
Q Consensus 737 ~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg-iamg~~g~~-------~ak~~-aDivlldd~f~~i~~~i 803 (840)
.|...++.+.+++| +.++++||+.||.+|++.|+++ ++|+ ++.+ ..++. ||+++. ++..+..++
T Consensus 144 pk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~-~~~~~~~~~~~~l~~~~ad~v~~--~~~el~~~l 219 (229)
T 2fdr_A 144 PKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVIS--RMQDLPAVI 219 (229)
T ss_dssp TSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEES--CGGGHHHHH
T ss_pred cCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEe-cCCccchhhhHHHhhcCCceeec--CHHHHHHHH
Confidence 34445555444434 5789999999999999999998 7776 5543 35666 999984 477777655
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.86 E-value=2.1e-05 Score=78.01 Aligned_cols=119 Identities=13% Similarity=0.130 Sum_probs=81.7
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+ ++.|++. +++.++|+.+...+..+.+.+|+......++.+.+.. ...| |.
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------------------~~Kp--~~ 131 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKGIFSAESVK------------------EYKP--SP 131 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGT------------------CCTT--CH
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehhhcC------------------CCCC--CH
Confidence 46789999 9999999 9999999999999999999999864322222222111 0112 23
Q ss_pred HHHHHHHHhCC-CEEEEEcCCccCHHHhhhCCccEEe----cCCCcHHHHhhcCEEeccCCchHHHHHH
Q 003189 740 TLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGLAM----GIAGTEVAKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 740 ~~V~~l~~~~g-~~v~~~GDG~ND~~al~~Advgiam----g~~g~~~ak~~aDivlldd~f~~i~~~i 803 (840)
..++.+.+++| +.+.|+||+.||..|.+.|+++.+| + +..+..+..+|+++. ++..+...+
T Consensus 132 ~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~el~~~l 197 (201)
T 2w43_A 132 KVYKYFLDSIGAKEAFLVSSNAFDVIGAKNAGMRSIFVNRKN-TIVDPIGGKPDVIVN--DFKELYEWI 197 (201)
T ss_dssp HHHHHHHHHHTCSCCEEEESCHHHHHHHHHTTCEEEEECSSS-CCCCTTSCCCSEEES--SHHHHHHHH
T ss_pred HHHHHHHHhcCCCcEEEEeCCHHHhHHHHHCCCEEEEECCCC-CCccccCCCCCEEEC--CHHHHHHHH
Confidence 33333322224 5688999999999999999999877 3 223333456898874 477776655
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.85 E-value=3.4e-05 Score=75.49 Aligned_cols=106 Identities=15% Similarity=0.041 Sum_probs=72.8
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHH
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~ 740 (840)
+.|++.+.++.|++.|+++.++|+... .+..+.+.+|+...-..++.+.+. .. +..|..
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~~~~~~~~~------------------~~--~kp~~~ 141 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFTEVVTSSSG------------------FK--RKPNPE 141 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEEEEECGGGC------------------CC--CTTSCH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhheeeeeecccc------------------CC--CCCCHH
Confidence 679999999999999999999999874 567778888875421122222110 01 122344
Q ss_pred HHHHHHHhCCC-EEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcC
Q 003189 741 LVKHLRTTLGE-VVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD 788 (840)
Q Consensus 741 ~V~~l~~~~g~-~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aD 788 (840)
.++.+.+++|- .+.++||+.||.+|++.|++++++. +.....++..+
T Consensus 142 ~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~l~ 189 (190)
T 2fi1_A 142 SMLYLREKYQISSGLVIGDRPIDIEAGQAAGLDTHLF-TSIVNLRQVLD 189 (190)
T ss_dssp HHHHHHHHTTCSSEEEEESSHHHHHHHHHTTCEEEEC-SCHHHHHHHHT
T ss_pred HHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCeEEEE-CCCCChhhccC
Confidence 45554444352 6899999999999999999999887 44455555544
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.84 E-value=3.1e-05 Score=77.60 Aligned_cols=118 Identities=15% Similarity=0.122 Sum_probs=85.2
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++ |+++.++|+.+...+..+.+.+|+......+ +.+...+.-|.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i----------------------~~~~~~~Kp~p 140 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDGI----------------------YGSSPEAPHKA 140 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSEE----------------------EEECSSCCSHH
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheeee----------------------ecCCCCCCCCh
Confidence 467999999999999 9999999999988888888999986421111 22221234466
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCc---cEEecCCCcHHHH-hhcCEEeccCCchHHHHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI---GLAMGIAGTEVAK-ESADVIILDDNFSTIVTV 802 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Adv---giamg~~g~~~ak-~~aDivlldd~f~~i~~~ 802 (840)
.+++.+.+++| +.+.|+||+.||..|.++|++ ++++|....+..+ ..+|+++. ++..+..+
T Consensus 141 ~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~--~~~el~~~ 208 (210)
T 2ah5_A 141 DVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAH--KPLEVLAY 208 (210)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEES--STTHHHHH
T ss_pred HHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEEC--CHHHHHHH
Confidence 66666555546 569999999999999999998 7777732233333 35899884 47766543
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.84 E-value=2.1e-05 Score=80.82 Aligned_cols=120 Identities=13% Similarity=0.080 Sum_probs=86.6
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++. +++.++|+........+.+.+|+. ...++.++... ....|.
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~--f~~~~~~~~~~--------------------~~kp~~ 176 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP--WDMLLCADLFG--------------------HYKPDP 176 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC--CSEECCHHHHT--------------------CCTTSH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC--cceEEeecccc--------------------cCCCCH
Confidence 4578999999999985 999999999999999999999984 12222221110 123345
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecC----CCc---HH--HHhhcCEEeccCCchHHHHHHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGI----AGT---EV--AKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~----~g~---~~--ak~~aDivlldd~f~~i~~~i~ 804 (840)
.+++.+.+++| +.++++||+.||..|.+.|+++++|.. .|. +. .+..+|+++. ++..+..++.
T Consensus 177 ~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~--~l~el~~~l~ 251 (254)
T 3umc_A 177 QVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIAS--DLLDLHRQLA 251 (254)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEES--SHHHHHHHHH
T ss_pred HHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEEC--CHHHHHHHhc
Confidence 55555544445 679999999999999999999999984 222 11 2567999984 4888877664
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.83 E-value=3.2e-05 Score=79.27 Aligned_cols=121 Identities=14% Similarity=0.163 Sum_probs=88.0
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++. +++.++|+........+.+.+|+. ...++.+.... ....|.
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~--f~~~~~~~~~~--------------------~~kp~~ 172 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP--WDVIIGSDINR--------------------KYKPDP 172 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC--CSCCCCHHHHT--------------------CCTTSH
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC--eeEEEEcCcCC--------------------CCCCCH
Confidence 5679999999999997 999999999999999999999985 12222221111 112234
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCC----Cc---H-H-HHhhcCEEeccCCchHHHHHHHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIA----GT---E-V-AKESADVIILDDNFSTIVTVAKW 805 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~----g~---~-~-ak~~aDivlldd~f~~i~~~i~~ 805 (840)
..++.+.+++| +.+.++||+.||..|.+.|+++++|... |. + . .+..+|+++. ++..+..++..
T Consensus 173 ~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~--~~~el~~~l~~ 248 (254)
T 3umg_A 173 QAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISAT--DITDLAAQLRA 248 (254)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEES--SHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEEC--CHHHHHHHhcC
Confidence 55555555546 6799999999999999999999999842 21 1 1 3567899984 59888887654
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.79 E-value=2.9e-05 Score=80.21 Aligned_cols=121 Identities=12% Similarity=0.109 Sum_probs=84.9
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|+ |+++.++|+.+...+..+.+.+|+......++.+.+.. .+.-|.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~--------------------~~Kp~~ 150 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKR--------------------VFKPHP 150 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGT--------------------CCTTSH
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccEEEEccccC--------------------CCCCCH
Confidence 57899999999999 99999999999999999999999864322222222111 112233
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCC-----------------------C---cHHHHhhcCEE
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIA-----------------------G---TEVAKESADVI 790 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~-----------------------g---~~~ak~~aDiv 790 (840)
..++.+.+++| +.+.|+||+.||..|.+.|+++.+|... + .+..+..+|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (253)
T 1qq5_A 151 DSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFV 230 (253)
T ss_dssp HHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEE
T ss_pred HHHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCee
Confidence 34443333324 5688999999999999999999998733 1 12234568998
Q ss_pred eccCCchHHHHHHH
Q 003189 791 ILDDNFSTIVTVAK 804 (840)
Q Consensus 791 lldd~f~~i~~~i~ 804 (840)
+ +++..+..++.
T Consensus 231 ~--~~~~el~~~l~ 242 (253)
T 1qq5_A 231 V--PALGDLPRLVR 242 (253)
T ss_dssp E--SSGGGHHHHHH
T ss_pred e--CCHHHHHHHHH
Confidence 8 45888887664
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.78 E-value=4.5e-05 Score=75.08 Aligned_cols=88 Identities=15% Similarity=0.176 Sum_probs=68.7
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCC-HHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEe--cCcc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDN-INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR--SSPM 736 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~-~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar--~~P~ 736 (840)
++.|++.++++.|++.|+++.++||.. ...+..+.+.+|+... |.. ..+.
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~---------------------------f~~~~~~~~ 120 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRY---------------------------FVHREIYPG 120 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTT---------------------------EEEEEESSS
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhh---------------------------cceeEEEeC
Confidence 578999999999999999999999998 7999999999998642 111 2334
Q ss_pred cHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEE
Q 003189 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA 774 (840)
Q Consensus 737 ~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgia 774 (840)
.|...++.+.+++| +.++|+||+.||..+.+.|++...
T Consensus 121 ~k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 121 SKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCI 161 (187)
T ss_dssp CHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred chHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEE
Confidence 56555554443335 568999999999999999998643
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.75 E-value=2.8e-05 Score=81.67 Aligned_cols=112 Identities=15% Similarity=0.068 Sum_probs=76.7
Q ss_pred CCcchHHHHHHHHhC-CCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 661 MRPGVKESVAICRSA-GITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 661 lR~~~~~aI~~l~~a-Gi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
+.|++.+.++.|++. |+++.++|+.....+..+.+.+|+.. ...++.+.+.. .+..|.
T Consensus 115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~-f~~i~~~~~~~--------------------~~kp~~ 173 (275)
T 2qlt_A 115 EVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR-PEYFITANDVK--------------------QGKPHP 173 (275)
T ss_dssp ECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC-CSSEECGGGCS--------------------SCTTSS
T ss_pred cCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc-cCEEEEcccCC--------------------CCCCCh
Confidence 478999999999999 99999999999999999999998852 22333333211 011122
Q ss_pred HHHHHHHHhCC----------CEEEEEcCCccCHHHhhhCCccEEe---cCCCcHHHHhhcCEEecc
Q 003189 740 TLVKHLRTTLG----------EVVAVTGDGTNDAPALHEADIGLAM---GIAGTEVAKESADVIILD 793 (840)
Q Consensus 740 ~~V~~l~~~~g----------~~v~~~GDG~ND~~al~~Advgiam---g~~g~~~ak~~aDivlld 793 (840)
..++.+.+++| +.++++||+.||.+|++.|+++++| |.+..+..+..||+++.+
T Consensus 174 ~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~ 240 (275)
T 2qlt_A 174 EPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKN 240 (275)
T ss_dssp HHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESS
T ss_pred HHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 33333333323 4589999999999999999977666 523233333359998743
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.62 E-value=8.2e-05 Score=75.31 Aligned_cols=123 Identities=13% Similarity=0.159 Sum_probs=82.0
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++ |+++.++|+........+.+.++- .-..++.+.++.. ..-.|.-..
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~--~fd~i~~~~~~~~----------------~KP~~~~~~ 159 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGV--EFDHIITAQDVGS----------------YKPNPNNFT 159 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCS--CCSEEEEHHHHTS----------------CTTSHHHHH
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCC--ccCEEEEccccCC----------------CCCCHHHHH
Confidence 678999999999999 899999999998877777665442 1122222221110 011222223
Q ss_pred HHHHHHHHhCC---CEEEEEcCCc-cCHHHhhhCCccEEecCCC----------cHHHHhhcCEEeccCCchHHHHHHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIGLAMGIAG----------TEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~-ND~~al~~Advgiamg~~g----------~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
..++.++.. | +.+.++||+. ||..|.+.|+++++|...+ .+..+..+|+++. ++..+.+++.
T Consensus 160 ~~l~~~~~l-gi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~--~~~el~~~l~ 235 (240)
T 3smv_A 160 YMIDALAKA-GIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFN--SMGEMAEAHK 235 (240)
T ss_dssp HHHHHHHHT-TCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEES--SHHHHHHHHH
T ss_pred HHHHHHHhc-CCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeC--CHHHHHHHHH
Confidence 443333332 4 6789999996 9999999999999995322 1334578999984 4888877664
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.58 E-value=4.3e-05 Score=79.57 Aligned_cols=123 Identities=11% Similarity=0.174 Sum_probs=83.2
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.++++.|++.|+++.++|+.... ...+.+.+|+...-..++.+.+.. .+.-+.
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~~~~~~~~~~--------------------~~Kp~~ 164 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFDFVLTSEAAG--------------------WPKPDP 164 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCSCEEEHHHHS--------------------SCTTSH
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhhEEEeecccC--------------------CCCCCH
Confidence 35799999999999999999999997664 678888999864322222222110 011122
Q ss_pred HHHHHHHHhCC---CEEEEEcCCc-cCHHHhhhCCccEEecCCCcHH-----HHhhcCEEeccCCchHHHHHHHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIGLAMGIAGTEV-----AKESADVIILDDNFSTIVTVAKW 805 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~-ND~~al~~Advgiamg~~g~~~-----ak~~aDivlldd~f~~i~~~i~~ 805 (840)
.+++.+.+++| +.+.|+||+. ||..|.+.|+++.+|...+... ....+|+++. ++..+..++..
T Consensus 165 ~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~--~l~el~~~l~~ 237 (263)
T 3k1z_A 165 RIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILP--SLAHLLPALDC 237 (263)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEES--SGGGHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeC--CHHHHHHHHHH
Confidence 33333222224 6799999997 9999999999999997444321 1236899884 48888877653
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00043 Score=71.05 Aligned_cols=117 Identities=14% Similarity=0.103 Sum_probs=81.5
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|+ .|+++.++|+.....+....+.+|+...... +++...| +.
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~-----------------------i~~~~kp--~~ 165 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFPR-----------------------IEVVSEK--DP 165 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCCC-----------------------EEEESCC--SH
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCce-----------------------eeeeCCC--CH
Confidence 45799999999999 9999999999999888888888888542111 3333334 23
Q ss_pred HHHHHHHHhCC---CEEEEEcCCc-cCHHHhhhCCccEEecCCCcH--------HHHhhcCE-EeccCCchHHHHHHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIGLAMGIAGTE--------VAKESADV-IILDDNFSTIVTVAK 804 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~-ND~~al~~Advgiamg~~g~~--------~ak~~aDi-vlldd~f~~i~~~i~ 804 (840)
..++.+.+++| +.++++||+. ||..|.+.|++++++=..|.. .....+|+ ++ +++..+..++.
T Consensus 166 ~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~~l~ 241 (251)
T 2pke_A 166 QTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREV--PDPSGWPAAVR 241 (251)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEEC--SSGGGHHHHHH
T ss_pred HHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeee--CCHHHHHHHHH
Confidence 34444333334 6789999999 999999999999876323321 11345887 66 45888877654
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00016 Score=71.29 Aligned_cols=133 Identities=11% Similarity=0.091 Sum_probs=86.9
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCH---HHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCc
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNI---NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~---~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (840)
-++.|++.++++.|+++|+++.++|+... ..+..+.+.+|+......++...+... ......|
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~--------------~~~~~KP 98 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQ--------------PGKMEKP 98 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSS--------------TTCCCTT
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEcccccc--------------ccCCCCc
Confidence 46889999999999999999999998775 888899999998642111111111000 0000012
Q ss_pred ccHHHHHH-HHHHhCC---CEEEEEcCC-ccCHHHhhhCCccEEecCCCcH-----HHH-hhcCEEeccCCchHHHHHHH
Q 003189 736 MDKHTLVK-HLRTTLG---EVVAVTGDG-TNDAPALHEADIGLAMGIAGTE-----VAK-ESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 736 ~~K~~~V~-~l~~~~g---~~v~~~GDG-~ND~~al~~Advgiamg~~g~~-----~ak-~~aDivlldd~f~~i~~~i~ 804 (840)
+..+.+ .+++. | +.+.|+||+ .+|..+-+.|++....=..+.. ... ..+|.++.+.++..+..++.
T Consensus 99 --~p~~~~~~~~~~-~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~ 175 (189)
T 3ib6_A 99 --DKTIFDFTLNAL-QIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALL 175 (189)
T ss_dssp --SHHHHHHHHHHH-TCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHH
T ss_pred --CHHHHHHHHHHc-CCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHH
Confidence 122232 23332 4 679999999 7999999999986443212221 111 26899998667999999988
Q ss_pred HHHH
Q 003189 805 WGRS 808 (840)
Q Consensus 805 ~gR~ 808 (840)
..+.
T Consensus 176 l~~~ 179 (189)
T 3ib6_A 176 LLKK 179 (189)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00045 Score=69.02 Aligned_cols=122 Identities=20% Similarity=0.232 Sum_probs=81.0
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++.|+++.++|+.+...+..+.+.+|+....+.++.+.+.. ...|.- .
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~------------------~~KP~p-~ 144 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVK------------------NGKPDP-E 144 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSS------------------SCTTST-H
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccccccC------------------CCcccH-H
Confidence 357899999999999999999999999999999999999975433333333221 112221 1
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccE----EecCCCcHHHHhh-cCEEeccCCchHHHHHHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL----AMGIAGTEVAKES-ADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgi----amg~~g~~~ak~~-aDivlldd~f~~i~~~i~ 804 (840)
-+...+++. | +.+.|+||..+|..+-++|++.. .-|.+..+..+++ ++.+. + +..+++.++
T Consensus 145 ~~~~a~~~l-g~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~-~--~~eli~~l~ 213 (216)
T 3kbb_A 145 IYLLVLERL-NVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALV-K--PEEILNVLK 213 (216)
T ss_dssp HHHHHHHHH-TCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEE-C--GGGHHHHHH
T ss_pred HHHHHHHhh-CCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEEC-C--HHHHHHHHH
Confidence 222333333 4 67899999999999999999753 3343334444454 45544 3 455555543
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00018 Score=71.05 Aligned_cols=99 Identities=10% Similarity=-0.001 Sum_probs=69.5
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++.| ++.++|+.+......+.+.+|+......++.+.+.. ...|. .
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~------------------~~Kp~--~ 144 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTSSALG------------------VMKPN--P 144 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCSCEEEHHHHS------------------CCTTC--H
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcceEEeecccC------------------CCCCC--H
Confidence 46799999999999999 999999999999999999999864322222221110 11222 2
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCC
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAG 779 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g 779 (840)
.+++.+.+++| +.+.++||+.||.+|.+.|++..++-..+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~ 187 (200)
T 3cnh_A 145 AMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVDA 187 (200)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSCH
T ss_pred HHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEECCc
Confidence 23333222224 56899999999999999999998875343
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00011 Score=75.99 Aligned_cols=52 Identities=21% Similarity=0.274 Sum_probs=40.3
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcC----CccCHHHhhhCC-ccEEecCCCcHHHHhhcCE
Q 003189 736 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHEAD-IGLAMGIAGTEVAKESADV 789 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~~GD----G~ND~~al~~Ad-vgiamg~~g~~~ak~~aDi 789 (840)
.+|...++.|.+. -+.++++|| |.||.+||+.|+ +|++|+ ++.|..|..+++
T Consensus 186 v~Kg~al~~L~~~-~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~-n~~~~~~~~~~~ 242 (246)
T 3f9r_A 186 WDKTYCLQFVEDD-FEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVT-SYKDTIAEVEKI 242 (246)
T ss_dssp CSGGGGGGGTTTT-CSEEEEEESCCSTTSTTHHHHTCTTSEEEECS-SHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcC-cccEEEEeCCCCCCCCCHHHHhCCCccEEEeC-CHHHHHHHHHHH
Confidence 4566666666552 567899999 799999999996 899999 888887765543
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00011 Score=73.16 Aligned_cols=99 Identities=8% Similarity=0.038 Sum_probs=67.7
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH------cCCccCCCccccChhhhcCCHHHHhhhcCCceEEEec
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE------CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~------~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (840)
++.|++.+.++.|++ |+++.++|+.....+..+.+. .|+...-..++.+.+.. ..
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~------------------~~ 149 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMG------------------KY 149 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHT------------------CC
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccC------------------CC
Confidence 467999999999999 999999999998888877777 67643211222111100 11
Q ss_pred CcccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCC
Q 003189 734 SPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAG 779 (840)
Q Consensus 734 ~P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g 779 (840)
.|. ..+++.+.+++| +.+.++||+.||.+|.+.|+++.+|...+
T Consensus 150 Kp~--~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~ 196 (211)
T 2i6x_A 150 KPN--EDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNG 196 (211)
T ss_dssp TTS--HHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTT
T ss_pred CCC--HHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCH
Confidence 122 233333322224 57899999999999999999999998444
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.24 E-value=9.9e-05 Score=74.58 Aligned_cols=131 Identities=16% Similarity=0.115 Sum_probs=75.9
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCCcccc--ChhhhcCCHHHHh
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECGILTDNGIAIE--GPEFREKSDEELS 721 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~---------------~ta~~iA~~~Gi~~~~~~~~~--g~~~~~~~~~~~~ 721 (840)
.++.|++.++++.|+++|+++.++|+... ..+..+.+++|+.-. ..... +.. -.+. +.
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-~~~~~~~~~~-g~~~--~~- 129 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVD-MVLACAYHEA-GVGP--LA- 129 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCS-EEEEECCCTT-CCST--TC-
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCcee-eEEEeecCCC-Ccee--ec-
Confidence 57889999999999999999999999887 677888888887411 00000 000 0000 00
Q ss_pred hhcCCceEEEecCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccE-EecCCCc---HHHHhhcCEEeccC
Q 003189 722 KLIPKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL-AMGIAGT---EVAKESADVIILDD 794 (840)
Q Consensus 722 ~~~~~~~v~ar~~P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgi-amg~~g~---~~ak~~aDivlldd 794 (840)
... + ..+.-|..+++.+.+++| +.++|+||+.||..+.+.|++.. .+-..|. +.....+|+++.
T Consensus 130 --~~~--~---~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~-- 200 (218)
T 2o2x_A 130 --IPD--H---PMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSS-- 200 (218)
T ss_dssp --CSS--C---TTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHH--
T ss_pred --ccC--C---ccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecc--
Confidence 000 0 001122234444333324 56899999999999999999765 3311222 111223565553
Q ss_pred CchHHHHHH
Q 003189 795 NFSTIVTVA 803 (840)
Q Consensus 795 ~f~~i~~~i 803 (840)
++..+..++
T Consensus 201 ~l~el~~~l 209 (218)
T 2o2x_A 201 ELGDLLAAI 209 (218)
T ss_dssp HHHHHHHHH
T ss_pred cHHHHHHHH
Confidence 366665544
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00031 Score=73.05 Aligned_cols=44 Identities=16% Similarity=0.103 Sum_probs=37.2
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcC---CCHHHHHHHHHHcCCcc
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTG---DNINTAKAIARECGILT 701 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TG---D~~~ta~~iA~~~Gi~~ 701 (840)
.+.+-|+++++|++++++|++++++|| ..........+++|+..
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~ 68 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEV 68 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCC
Confidence 444568899999999999999999999 67777777788888853
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00068 Score=68.20 Aligned_cols=116 Identities=16% Similarity=0.167 Sum_probs=75.0
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++. +++.++|+.... .+.+|+......++.+.+.. ...-|.
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f~~~~~~~~~~--------------------~~kp~~ 158 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYFAFALCAEDLG--------------------IGKPDP 158 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGCSEEEEHHHHT--------------------CCTTSH
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHeeeeEEccccC--------------------CCCcCH
Confidence 4678999999999998 999999987654 24455542211111111100 012223
Q ss_pred HHHHHHHHhCC---CEEEEEcCCc-cCHHHhhhCCccEEe---cCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIGLAM---GIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~-ND~~al~~Advgiam---g~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
.+++.+.+++| +.++|+||+. ||..|.+.|+++.++ |....+. +..+|+++. ++..+..++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~~--~l~el~~~l~ 227 (230)
T 3vay_A 159 APFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEIH--NLSQLPEVLA 227 (230)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEES--SGGGHHHHHH
T ss_pred HHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeEC--CHHHHHHHHH
Confidence 44444433334 6789999998 999999999998887 2122233 667899984 4888887764
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.09 E-value=0.001 Score=68.98 Aligned_cols=43 Identities=14% Similarity=0.037 Sum_probs=36.4
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcC---CCHHHHHHHHHHcCCcc
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTG---DNINTAKAIARECGILT 701 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TG---D~~~ta~~iA~~~Gi~~ 701 (840)
+.+-|+++++|++++++|++++++|| ..........+++|+..
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~ 66 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPA 66 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 34457899999999999999999988 77777888888899854
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0013 Score=68.23 Aligned_cols=121 Identities=14% Similarity=0.200 Sum_probs=80.8
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++ |+++.++|+.+...+..+.+.+|+......++.+.+.. ...|. .
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~~~~~~------------------~~KP~--p 179 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQK------------------EEKPA--P 179 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSS------------------SCTTC--H
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhheEEecCCCC------------------CCCCC--H
Confidence 567999999999998 59999999999999999999999865322222222210 01121 2
Q ss_pred HHHHHHHHhCC---CEEEEEcCC-ccCHHHhhhCCc--cEEecCCCcH--HHHhhcCEEeccCCchHHHHHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDG-TNDAPALHEADI--GLAMGIAGTE--VAKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG-~ND~~al~~Adv--giamg~~g~~--~ak~~aDivlldd~f~~i~~~i 803 (840)
.+.+...+++| +.+.|+||+ .||..+.+.|++ .+.++..+.. .....+|+++. ++..+..++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~--~~~el~~~l 249 (260)
T 2gfh_A 180 SIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELPALL 249 (260)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHHHHH
T ss_pred HHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEEC--CHHHHHHHH
Confidence 23332222224 578999995 999999999999 5777522211 12345888874 488877665
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00025 Score=73.86 Aligned_cols=57 Identities=14% Similarity=0.271 Sum_probs=48.9
Q ss_pred ccHHHHHHHHHHhC-CCEEEEEcC----CccCHHHhhhCC-ccEEecCCCcHHHHhhcCEEeccC
Q 003189 736 MDKHTLVKHLRTTL-GEVVAVTGD----GTNDAPALHEAD-IGLAMGIAGTEVAKESADVIILDD 794 (840)
Q Consensus 736 ~~K~~~V~~l~~~~-g~~v~~~GD----G~ND~~al~~Ad-vgiamg~~g~~~ak~~aDivlldd 794 (840)
.+|...++.| ... .+.|+++|| +.||.+||+.|+ +|++|| ++.+..|+.||+|..+.
T Consensus 196 vsKg~al~~l-~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~-NA~~~~k~~a~~v~~~~ 258 (262)
T 2fue_A 196 WDKRYCLDSL-DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFFPET 258 (262)
T ss_dssp CSTTHHHHHH-TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHCTTC
T ss_pred CCHHHHHHHH-HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec-CCCHHHHHhhheeCCCC
Confidence 6899999999 211 268999999 999999999999 599999 99999999999987554
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0008 Score=69.30 Aligned_cols=85 Identities=19% Similarity=0.235 Sum_probs=67.3
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCH----HHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEec
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNI----NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~----~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (840)
..++.|++.+.++.|++.|+++.++||... ..+..-.+++||..... -.++-|.
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~----------------------~~Lilr~ 156 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVND----------------------KTLLLKK 156 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCST----------------------TTEEEES
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCcccc----------------------ceeEecC
Confidence 467889999999999999999999999865 47777778899964210 0144454
Q ss_pred CcccHHHHHHHHHHhCC-CEEEEEcCCccCHHH
Q 003189 734 SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPA 765 (840)
Q Consensus 734 ~P~~K~~~V~~l~~~~g-~~v~~~GDG~ND~~a 765 (840)
...+|....+.+.+. | .+|+++||..+|.++
T Consensus 157 ~~~~K~~~r~~L~~~-gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 157 DKSNKSVRFKQVEDM-GYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp SCSSSHHHHHHHHTT-TCEEEEEEESSGGGGCG
T ss_pred CCCChHHHHHHHHhc-CCCEEEEECCChHHcCc
Confidence 557899999999875 4 689999999999987
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0012 Score=64.74 Aligned_cols=32 Identities=16% Similarity=0.273 Sum_probs=23.8
Q ss_pred HHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCC
Q 003189 613 NETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660 (840)
Q Consensus 613 ~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~ 660 (840)
.+.+..+..+|..++.+| .|..++|+|++.|+
T Consensus 154 ~~~~~~~~~~G~T~V~va----------------idg~l~g~iavaD~ 185 (185)
T 2kmv_A 154 NDFMTEHERKGRTAVLVA----------------VDDELCGLIAIADT 185 (185)
T ss_dssp HHHHHHHHHTTCEEEEEE----------------ETTEEEEEEEEECC
T ss_pred HHHHHHHHhCCCeEEEEE----------------ECCEEEEEEEEEcC
Confidence 344566677888777777 35678999999996
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.94 E-value=9.3e-05 Score=73.34 Aligned_cols=103 Identities=13% Similarity=0.076 Sum_probs=61.4
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH-cCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcc--
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM-- 736 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~-~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~-- 736 (840)
++.|++.+.++.|++.|+++.++|+........+... +|+...-..++.+.+. ....|.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~------------------~~~Kp~~~ 152 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDL------------------GMRKPEAR 152 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHH------------------TCCTTCHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEeccc------------------CCCCCCHH
Confidence 4679999999999999999999999765443332222 2322110011111100 011222
Q ss_pred cHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcH
Q 003189 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE 781 (840)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~ 781 (840)
--..+.+.+.-. .+.+.++||+.||.+|.+.|++...+...+.+
T Consensus 153 ~~~~~~~~~~~~-~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~ 196 (206)
T 2b0c_A 153 IYQHVLQAEGFS-PSDTVFFDDNADNIEGANQLGITSILVKDKTT 196 (206)
T ss_dssp HHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEECCSTTH
T ss_pred HHHHHHHHcCCC-HHHeEEeCCCHHHHHHHHHcCCeEEEecCCch
Confidence 112222222211 25789999999999999999999888744444
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.00031 Score=64.57 Aligned_cols=95 Identities=13% Similarity=0.077 Sum_probs=64.6
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
.++.|++.++++.|++.|+++.++|+.+...+..+.+.+|+...-..++.+.+.. ...|.
T Consensus 17 ~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~------------------~~Kp~-- 76 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSGELG------------------VEKPE-- 76 (137)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEEHHHHS------------------CCTTS--
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEEeccCC------------------CCCCC--
Confidence 3467899999999999999999999999888888888888754222222111100 01221
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccE
Q 003189 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (840)
Q Consensus 739 ~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgi 773 (840)
..+.+.+.+.+| +.+.|+||+.+|..+.+.+++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~ 114 (137)
T 2pr7_A 77 EAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVG 114 (137)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEE
Confidence 223333322324 46899999999999999999843
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0028 Score=65.79 Aligned_cols=43 Identities=16% Similarity=0.153 Sum_probs=38.2
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEc---CCCHHHHHHHHHHcCCcc
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVT---GDNINTAKAIARECGILT 701 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~T---GD~~~ta~~iA~~~Gi~~ 701 (840)
.++-+++.+++++++++|++++++| |..........+++|+..
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~ 77 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 77 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 5667899999999999999999999 889888888889998853
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=96.82 E-value=0.00095 Score=68.84 Aligned_cols=85 Identities=18% Similarity=0.137 Sum_probs=66.8
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCH----HHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEec
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNI----NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~----~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (840)
.+++.|++.+.++.|++.|+++.++||.+. ..+..-.+++||..-.. -.++-|.
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~----------------------~~Lilr~ 156 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEE----------------------SAFYLKK 156 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSG----------------------GGEEEES
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccc----------------------cceeccC
Confidence 567889999999999999999999999864 46677778899964110 0144454
Q ss_pred CcccHHHHHHHHHHhCC-CEEEEEcCCccCHHH
Q 003189 734 SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPA 765 (840)
Q Consensus 734 ~P~~K~~~V~~l~~~~g-~~v~~~GDG~ND~~a 765 (840)
.-..|....+.+.+. | .+|+++||..+|.++
T Consensus 157 ~~~~K~~~r~~l~~~-Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 157 DKSAKAARFAEIEKQ-GYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp SCSCCHHHHHHHHHT-TEEEEEEEESSGGGGCS
T ss_pred CCCChHHHHHHHHhc-CCCEEEEECCChHHhcc
Confidence 456788888888877 6 589999999999886
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0009 Score=73.40 Aligned_cols=134 Identities=16% Similarity=0.179 Sum_probs=84.5
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC--ccccChhhhcCCHHHHhhhcCCceEEEecCccc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (840)
++.||+.+.++.|+++|+++.++|+.....+..+.+.+|+...-. .++.+.+...- .+.++...- +..|.-
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~-----~~~~~~~kp--~~KP~P 287 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEA-----ENMYPQARP--LGKPNP 287 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHH-----HHHSTTSCC--CCTTST
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEeccccccc-----ccccccccC--CCCCCH
Confidence 678999999999999999999999999999999999999875433 34444332100 000000000 012221
Q ss_pred HHHHHHHHHHh----------------CCCEEEEEcCCccCHHHhhhCCcc-EEecCCCc-------HHHHhhcCEEecc
Q 003189 738 KHTLVKHLRTT----------------LGEVVAVTGDGTNDAPALHEADIG-LAMGIAGT-------EVAKESADVIILD 793 (840)
Q Consensus 738 K~~~V~~l~~~----------------~g~~v~~~GDG~ND~~al~~Advg-iamg~~g~-------~~ak~~aDivlld 793 (840)
.. +...+++. ..+.+.|+||+.+|..+-++|++. |.+. .|. +.....+|+++.
T Consensus 288 ~~-~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~-~g~~~~~~~~~l~~~~ad~vi~- 364 (384)
T 1qyi_A 288 FS-YIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTL-TGLKGKDAAGELEAHHADYVIN- 364 (384)
T ss_dssp HH-HHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEES-CBTTBGGGHHHHHHTTCSEEES-
T ss_pred HH-HHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEEC-CCccccccHHHHhhcCCCEEEC-
Confidence 11 22222221 026789999999999999999975 3333 221 222346899984
Q ss_pred CCchHHHHHHH
Q 003189 794 DNFSTIVTVAK 804 (840)
Q Consensus 794 d~f~~i~~~i~ 804 (840)
++..+..++.
T Consensus 365 -sl~eL~~~l~ 374 (384)
T 1qyi_A 365 -HLGELRGVLD 374 (384)
T ss_dssp -SGGGHHHHHS
T ss_pred -CHHHHHHHHH
Confidence 4888877653
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0055 Score=60.61 Aligned_cols=117 Identities=12% Similarity=0.162 Sum_probs=74.2
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.++++.|+++|+++.++||.....+..+.. .. ...++.+.+. .+..|. ..
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~~--~d~v~~~~~~------------------~~~KP~-p~ 91 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---PV--NDWMIAAPRP------------------TAGWPQ-PD 91 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---TT--TTTCEECCCC------------------SSCTTS-TH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---cc--CCEEEECCcC------------------CCCCCC-hH
Confidence 567999999999999999999999998877755443 11 1112221110 011221 12
Q ss_pred HHHHHHHHhCC----CEEEEEcCCccCHHHhhhCCc-cEEecCCCc---------------------------HHHHhhc
Q 003189 740 TLVKHLRTTLG----EVVAVTGDGTNDAPALHEADI-GLAMGIAGT---------------------------EVAKESA 787 (840)
Q Consensus 740 ~~V~~l~~~~g----~~v~~~GDG~ND~~al~~Adv-giamg~~g~---------------------------~~ak~~a 787 (840)
-+.+.+++. | +.+.|+||..+|..+-+.|++ .|.+. .|. +.....+
T Consensus 92 ~~~~a~~~l-~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~-~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~ 169 (196)
T 2oda_A 92 ACWMALMAL-NVSQLEGCVLISGDPRLLQSGLNAGLWTIGLA-SCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGV 169 (196)
T ss_dssp HHHHHHHHT-TCSCSTTCEEEESCHHHHHHHHHHTCEEEEES-SSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHc-CCCCCccEEEEeCCHHHHHHHHHCCCEEEEEc-cCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCC
Confidence 334444433 3 468999999999999999997 34443 221 0112358
Q ss_pred CEEeccCCchHHHHHHH
Q 003189 788 DVIILDDNFSTIVTVAK 804 (840)
Q Consensus 788 Divlldd~f~~i~~~i~ 804 (840)
|+++ +++..+..++.
T Consensus 170 d~vi--~~~~eL~~~l~ 184 (196)
T 2oda_A 170 HSVI--DHLGELESCLA 184 (196)
T ss_dssp SEEE--SSGGGHHHHHH
T ss_pred CEEe--CCHHHHHHHHH
Confidence 9998 45888877663
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.71 E-value=0.00022 Score=73.43 Aligned_cols=53 Identities=19% Similarity=0.289 Sum_probs=44.0
Q ss_pred ccHHHHHHHHHHhC-CCEEEEEcC----CccCHHHhhhCCc-cEEecCCCcHHHHhhcCEE
Q 003189 736 MDKHTLVKHLRTTL-GEVVAVTGD----GTNDAPALHEADI-GLAMGIAGTEVAKESADVI 790 (840)
Q Consensus 736 ~~K~~~V~~l~~~~-g~~v~~~GD----G~ND~~al~~Adv-giamg~~g~~~ak~~aDiv 790 (840)
.+|...++.| ... .+.|+++|| |.||.+||+.|+. |++|| ++.+..|+.||+|
T Consensus 187 ~~Kg~al~~l-~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~-Na~~~vk~~A~~v 245 (246)
T 2amy_A 187 WDKRYCLRHV-ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APEDTRRICELLF 245 (246)
T ss_dssp CSGGGGGGGT-TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHHHHHHHHHHC
T ss_pred CchHHHHHHH-hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEee-CCCHHHHHHHhhc
Confidence 5899988888 211 268999999 9999999999987 99999 9999999999986
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=96.69 E-value=0.00078 Score=68.07 Aligned_cols=100 Identities=14% Similarity=0.082 Sum_probs=66.0
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHH------HHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEec
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA------RECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA------~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (840)
++.|++.++++.|++. +++.++|+.+...+..+. +..|+...-..++.+.+.. ..
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~------------------~~ 172 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMK------------------MA 172 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHT------------------CC
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccC------------------CC
Confidence 4669999999999999 999999999998888766 4445532111111111100 11
Q ss_pred CcccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCc
Q 003189 734 SPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGT 780 (840)
Q Consensus 734 ~P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~ 780 (840)
.| +..+++.+.+++| +.+.++||+.||..|.+.|+++.++...+.
T Consensus 173 KP--~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~ 220 (229)
T 4dcc_A 173 KP--EPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGE 220 (229)
T ss_dssp TT--CHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTC
T ss_pred CC--CHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHH
Confidence 22 1233333322224 678999999999999999999999874443
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0031 Score=64.79 Aligned_cols=115 Identities=13% Similarity=0.217 Sum_probs=76.6
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCc--c
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP--M 736 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P--~ 736 (840)
.++.|++.+.++.|++.|+++.+.|+.. .+..+-+.+|+......++.+.+.. +..| +
T Consensus 115 ~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~i~~~~~~~------------------~~KP~p~ 174 (250)
T 4gib_A 115 NDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDFIADAGKCK------------------NNKPHPE 174 (250)
T ss_dssp GGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSEECCGGGCC------------------SCTTSSH
T ss_pred cccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccceeecccccC------------------CCCCcHH
Confidence 3568999999999999999998877654 4566778899976544444444322 1122 2
Q ss_pred cHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc-cEEecCCCcHHHHhhcCEEeccCCchHH
Q 003189 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAMGIAGTEVAKESADVIILDDNFSTI 799 (840)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Adv-giamg~~g~~~ak~~aDivlldd~f~~i 799 (840)
-=..+.+.+.-. .+.+.|+||..+|..+-++|++ .|.++ +..+ ...||+++- ++..+
T Consensus 175 ~~~~a~~~lg~~-p~e~l~VGDs~~Di~aA~~aG~~~i~v~-~~~~--~~~ad~vi~--~l~eL 232 (250)
T 4gib_A 175 IFLMSAKGLNVN-PQNCIGIEDASAGIDAINSANMFSVGVG-NYEN--LKKANLVVD--STNQL 232 (250)
T ss_dssp HHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEES-CTTT--TTTSSEEES--SGGGC
T ss_pred HHHHHHHHhCCC-hHHeEEECCCHHHHHHHHHcCCEEEEEC-ChhH--hccCCEEEC--ChHhC
Confidence 222333333222 3678999999999999999998 45555 3333 245899984 47665
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.021 Score=58.54 Aligned_cols=41 Identities=20% Similarity=0.178 Sum_probs=36.4
Q ss_pred CCcchHHHHHHHHhCCCEEEEEc---CCCHHHHHHHHHHcCCcc
Q 003189 661 MRPGVKESVAICRSAGITVRMVT---GDNINTAKAIARECGILT 701 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~T---GD~~~ta~~iA~~~Gi~~ 701 (840)
+-++..++++.+++.|+++.++| |..........+++|+..
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~ 76 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFDI 76 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCCC
Confidence 56788999999999999999999 999998888888888753
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=96.06 E-value=0.0055 Score=61.96 Aligned_cols=58 Identities=14% Similarity=0.142 Sum_probs=40.5
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCC-ccCHHHhhhCCccEE---ecCCCcHHHH---hhcCEEecc
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDG-TNDAPALHEADIGLA---MGIAGTEVAK---ESADVIILD 793 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG-~ND~~al~~Advgia---mg~~g~~~ak---~~aDivlld 793 (840)
..|...++.+.+++| +.++++||+ .||.+|++.|+++++ +|....+..+ ..+|+++.+
T Consensus 176 kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~ 243 (250)
T 2c4n_A 176 KPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPS 243 (250)
T ss_dssp TTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESS
T ss_pred CCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECC
Confidence 345666776665545 679999999 799999999998854 4532223333 468998843
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=95.75 E-value=0.01 Score=61.43 Aligned_cols=42 Identities=17% Similarity=0.247 Sum_probs=37.4
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEc---CCCHHHHHHHHHHcCCcc
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVT---GDNINTAKAIARECGILT 701 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~T---GD~~~ta~~iA~~~Gi~~ 701 (840)
.++ |+++++|++++++|++++++| |..........+++|+..
T Consensus 21 ~~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~ 65 (264)
T 3epr_A 21 SRI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVET 65 (264)
T ss_dssp EEC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCC
T ss_pred EEC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 355 899999999999999999999 888888888889999854
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.66 E-value=0.0071 Score=60.54 Aligned_cols=95 Identities=13% Similarity=0.055 Sum_probs=61.3
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|+++|+++.++|+... .+..+.+.+|+...-..++.+.+. ....|.- .
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~------------------~~~Kp~~-~ 154 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDALALSYEI------------------KAVKPNP-K 154 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEEC-----------------------------C-C
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEEEecccc------------------CCCCCCH-H
Confidence 4679999999999999999999999866 478888899986432222222211 1112211 1
Q ss_pred HHHHHHHHhCCCEEEEEcCCcc-CHHHhhhCCccEEe
Q 003189 740 TLVKHLRTTLGEVVAVTGDGTN-DAPALHEADIGLAM 775 (840)
Q Consensus 740 ~~V~~l~~~~g~~v~~~GDG~N-D~~al~~Advgiam 775 (840)
.+-+.+++. |-.-.|+||+.+ |..+.+.|++....
T Consensus 155 ~~~~~~~~~-~~~~~~vgD~~~~Di~~a~~aG~~~i~ 190 (220)
T 2zg6_A 155 IFGFALAKV-GYPAVHVGDIYELDYIGAKRSYVDPIL 190 (220)
T ss_dssp HHHHHHHHH-CSSEEEEESSCCCCCCCSSSCSEEEEE
T ss_pred HHHHHHHHc-CCCeEEEcCCchHhHHHHHHCCCeEEE
Confidence 122233333 522299999999 99999999987553
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=95.60 E-value=0.014 Score=58.88 Aligned_cols=115 Identities=11% Similarity=0.185 Sum_probs=75.0
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++.| ++.++|+.....+..+.+.+|+... +... +.. ...|.
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~---------------------f~~~-~~~---~~~K~ 149 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDE---------------------VEGR-VLI---YIHKE 149 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHH---------------------TTTC-EEE---ESSGG
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHh---------------------cCee-EEe---cCChH
Confidence 67899999999999999 9999999999889999999987521 0011 111 12343
Q ss_pred HHHHHHHHhC-CCEEEEEcCCcc---CHHHhhhCCcc-EEecCCC----c-HHHHh--hcCEEeccCCchHHHHHH
Q 003189 740 TLVKHLRTTL-GEVVAVTGDGTN---DAPALHEADIG-LAMGIAG----T-EVAKE--SADVIILDDNFSTIVTVA 803 (840)
Q Consensus 740 ~~V~~l~~~~-g~~v~~~GDG~N---D~~al~~Advg-iamg~~g----~-~~ak~--~aDivlldd~f~~i~~~i 803 (840)
.+++.+.+.. .+.++|+||+.| |..+-+.|++. +.+. .| . +..++ .+|+++. ++..+..++
T Consensus 150 ~~~~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~-~g~~~~~~~~l~~~~~~~~~i~--~~~el~~~l 222 (231)
T 2p11_A 150 LMLDQVMECYPARHYVMVDDKLRILAAMKKAWGARLTTVFPR-QGHYAFDPKEISSHPPADVTVE--RIGDLVEMD 222 (231)
T ss_dssp GCHHHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEEC-CSSSSSCHHHHHHSCCCSEEES--SGGGGGGCG
T ss_pred HHHHHHHhcCCCceEEEEcCccchhhhhHHHHHcCCeEEEeC-CCCCCCcchhccccCCCceeec--CHHHHHHHH
Confidence 3444443321 468999999999 66666777753 2232 22 2 22333 3899884 477665543
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=95.57 E-value=0.01 Score=63.56 Aligned_cols=120 Identities=14% Similarity=0.161 Sum_probs=73.3
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHc----CCccCCCccc----c-ChhhhcC-CHHHHhh------
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC----GILTDNGIAI----E-GPEFREK-SDEELSK------ 722 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~----Gi~~~~~~~~----~-g~~~~~~-~~~~~~~------ 722 (840)
..+.|++++.++.++++|++|+++||-+...++.+|.++ ||..++-+.+ . +..-... ...+..+
T Consensus 142 ~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y~~~ 221 (327)
T 4as2_A 142 PRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIGVTTLLKNRKTGELTTARKQIAEGKYDPK 221 (327)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGGEEEECEEEECTTTCCEECHHHHHHTTCCCGG
T ss_pred cccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHHeEeeeeeeecccccccccccccccccccccc
Confidence 356899999999999999999999999999999999985 6654321111 0 0000000 0111111
Q ss_pred hcCCceEEEecC-----cccHHHHHHHHHHhCCCEEEEEcCC-ccCHHHhhh--CCccEEecCC
Q 003189 723 LIPKIQVMARSS-----PMDKHTLVKHLRTTLGEVVAVTGDG-TNDAPALHE--ADIGLAMGIA 778 (840)
Q Consensus 723 ~~~~~~v~ar~~-----P~~K~~~V~~l~~~~g~~v~~~GDG-~ND~~al~~--Advgiamg~~ 778 (840)
..++..+..+.. -..|...|+.....-...+++.||+ ..|.+||.. ++.|+.+-++
T Consensus 222 ~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L~in 285 (327)
T 4as2_A 222 ANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHLWVN 285 (327)
T ss_dssp GGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEEEEC
T ss_pred ccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEEEEe
Confidence 111222222211 2557777777654412578999999 579999965 5556655433
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=95.57 E-value=0.012 Score=60.91 Aligned_cols=83 Identities=16% Similarity=0.290 Sum_probs=55.0
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCC---HHHHHHHHHHcCCc--cCCCccccChhhhcCCHHHHhhhcCCceEEEec
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDN---INTAKAIARECGIL--TDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~---~~ta~~iA~~~Gi~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (840)
.++.|++.++++.|++.|+++.++||.. ........+.+|+. ....+++.+++
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~---------------------- 157 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPK---------------------- 157 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTT----------------------
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCC----------------------
Confidence 4667999999999999999999999998 44555556778886 22222222221
Q ss_pred CcccHHHHHHHHHHhCC-CEEEEEcCCccCHHHh
Q 003189 734 SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPAL 766 (840)
Q Consensus 734 ~P~~K~~~V~~l~~~~g-~~v~~~GDG~ND~~al 766 (840)
+ .|......+.+. | ..++|+||..+|..+-
T Consensus 158 -~-~K~~~~~~~~~~-~~~~~l~VGDs~~Di~aA 188 (258)
T 2i33_A 158 -E-KGKEKRRELVSQ-THDIVLFFGDNLSDFTGF 188 (258)
T ss_dssp -C-CSSHHHHHHHHH-HEEEEEEEESSGGGSTTC
T ss_pred -C-CCcHHHHHHHHh-CCCceEEeCCCHHHhccc
Confidence 1 111122222222 3 4688999999998875
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=95.48 E-value=0.0051 Score=65.10 Aligned_cols=97 Identities=15% Similarity=0.123 Sum_probs=65.6
Q ss_pred ccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHH---HHHHHH--------cCCccCCCccccChhhhcCCHHHHhhhcC
Q 003189 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTA---KAIARE--------CGILTDNGIAIEGPEFREKSDEELSKLIP 725 (840)
Q Consensus 657 ~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta---~~iA~~--------~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~ 725 (840)
.++++.|++.++++.|+++|+++.++||.....+ ...-+. .|+. ...++.+.+..
T Consensus 185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~------------ 250 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP--LVMQCQREQGD------------ 250 (301)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC--CSEEEECCTTC------------
T ss_pred cccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCC--chheeeccCCC------------
Confidence 4678999999999999999999999999985432 333344 6872 22222221110
Q ss_pred CceEEEecCcccHHHHHHHHHHhCC-CEEEEEcCCccCHHHhhhCCccE
Q 003189 726 KIQVMARSSPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGL 773 (840)
Q Consensus 726 ~~~v~ar~~P~~K~~~V~~l~~~~g-~~v~~~GDG~ND~~al~~Advgi 773 (840)
.+-.|+-|..+.+.+... . +.++|+||..+|+.|-++|++-.
T Consensus 251 -----~kp~p~~~~~~~~~~~~~-~~~~~~~vgD~~~di~~a~~aG~~~ 293 (301)
T 1ltq_A 251 -----TRKDDVVKEEIFWKHIAP-HFDVKLAIDDRTQVVEMWRRIGVEC 293 (301)
T ss_dssp -----CSCHHHHHHHHHHHHTTT-TCEEEEEEECCHHHHHHHHHTTCCE
T ss_pred -----CcHHHHHHHHHHHHHhcc-ccceEEEeCCcHHHHHHHHHcCCeE
Confidence 012355566666666433 3 34688999999999999999853
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=95.35 E-value=0.1 Score=53.04 Aligned_cols=44 Identities=20% Similarity=0.301 Sum_probs=33.1
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEc---CCCHHHHHHHHHHcCCcc
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVT---GDNINTAKAIARECGILT 701 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~T---GD~~~ta~~iA~~~Gi~~ 701 (840)
.++.-+++.++++.+++.|+++.++| |..........+++|+..
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~ 67 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEI 67 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCc
Confidence 45555789999999999999999999 666666666666778754
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=95.27 E-value=0.0088 Score=57.95 Aligned_cols=95 Identities=20% Similarity=0.183 Sum_probs=60.7
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCC---------------CHHHHHHHHHHcCCccCCCccccC----hhhhcCCHHH
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGD---------------NINTAKAIARECGILTDNGIAIEG----PEFREKSDEE 719 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD---------------~~~ta~~iA~~~Gi~~~~~~~~~g----~~~~~~~~~~ 719 (840)
-++.|++.++++.|++.|+++.++|+- ....+..+.+.+|+.- ...++.+ .+..
T Consensus 41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f-d~v~~s~~~~~~~~~------ 113 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQF-DEVLICPHLPADECD------ 113 (176)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCE-EEEEEECCCGGGCCS------
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCe-eEEEEcCCCCccccc------
Confidence 357899999999999999999999997 4667788888888851 1111111 1100
Q ss_pred HhhhcCCceEEEecCcccH--HHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 003189 720 LSKLIPKIQVMARSSPMDK--HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (840)
Q Consensus 720 ~~~~~~~~~v~ar~~P~~K--~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgi 773 (840)
...|.-. ..+.+.+.-. .+.+.|+||+.+|..+.+.|++..
T Consensus 114 ------------~~KP~p~~~~~~~~~~gi~-~~~~l~VGD~~~Di~~A~~aG~~~ 156 (176)
T 2fpr_A 114 ------------CRKPKVKLVERYLAEQAMD-RANSYVIGDRATDIQLAENMGING 156 (176)
T ss_dssp ------------SSTTSCGGGGGGC----CC-GGGCEEEESSHHHHHHHHHHTSEE
T ss_pred ------------ccCCCHHHHHHHHHHcCCC-HHHEEEEcCCHHHHHHHHHcCCeE
Confidence 0112110 1111222111 256889999999999999999863
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=94.64 E-value=0.057 Score=55.73 Aligned_cols=112 Identities=18% Similarity=0.170 Sum_probs=71.1
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHc---CCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCc
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC---GILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~---Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (840)
-++.|++.++++.|+++|+++.++|.-+...+..+-+.+ |+...-..++.+ + +- ..|
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~-~-----------------~~--~KP 188 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDT-K-----------------IG--HKV 188 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECG-G-----------------GC--CTT
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEec-C-----------------CC--CCC
Confidence 368899999999999999999999999988887776644 464322122211 1 10 122
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc-EEecCCCc---HHHHhhcCEEec
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG-LAMGIAGT---EVAKESADVIIL 792 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg-iamg~~g~---~~ak~~aDivll 792 (840)
.- .-+-+.+++. | +.+.|+||..+|+.+-++|++- |.+.-.+. +.....+|.++.
T Consensus 189 ~p-~~~~~~~~~l-g~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~ 250 (261)
T 1yns_A 189 ES-ESYRKIADSI-GCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 250 (261)
T ss_dssp CH-HHHHHHHHHH-TSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred CH-HHHHHHHHHh-CcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEEC
Confidence 21 2222233332 3 6799999999999999999985 33321121 222345787773
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=94.47 E-value=0.096 Score=50.02 Aligned_cols=30 Identities=13% Similarity=0.252 Sum_probs=21.9
Q ss_pred HHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccC
Q 003189 614 ETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKD 659 (840)
Q Consensus 614 ~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D 659 (840)
..+..+..+|..++.+| .|..++|+|++.|
T Consensus 136 ~~~~~~~~~G~T~v~va----------------~dg~~~g~i~l~D 165 (165)
T 2arf_A 136 DAMTDHEMKGQTAILVA----------------IDGVLCGMIAIAD 165 (165)
T ss_dssp HHHHHHHTTTSEEEEEE----------------ETTEEEEEEEECC
T ss_pred HHHHHHHhCCCeEEEEE----------------ECCEEEEEEEEEC
Confidence 44456667787777777 3567899999987
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=94.41 E-value=0.044 Score=57.95 Aligned_cols=43 Identities=16% Similarity=0.089 Sum_probs=36.3
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEc---CCCHHHHHHHHHHcCCc
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVT---GDNINTAKAIARECGIL 700 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~T---GD~~~ta~~iA~~~Gi~ 700 (840)
.+++-|++.++++.|++.|++++++| |..........+++|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 45567889999999999999999999 57777777777788875
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=93.73 E-value=0.051 Score=55.26 Aligned_cols=106 Identities=16% Similarity=0.256 Sum_probs=71.2
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++.|+++.++|... .+..+-+.+|+......++.+.+.. +..|.- .
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~--~~~~~l~~~gl~~~fd~i~~~~~~~------------------~~KP~p-~ 153 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSL--NAPTILAALELREFFTFCADASQLK------------------NSKPDP-E 153 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCT--THHHHHHHTTCGGGCSEECCGGGCS------------------SCTTST-H
T ss_pred cccccHHHHHHhhhcccccceeccccc--chhhhhhhhhhcccccccccccccc------------------CCCCcH-H
Confidence 567999999999999999999999765 3556678899876544444444322 112221 2
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc-EEecCCCcHHHHhhcCEEec
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG-LAMGIAGTEVAKESADVIIL 792 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg-iamg~~g~~~ak~~aDivll 792 (840)
-+...+++. | +.+.|+||..+|+.+-++|++- |+++ .|. ..+|.++.
T Consensus 154 ~~~~a~~~l-g~~p~e~l~VgDs~~di~aA~~aG~~~I~V~-~g~----~~ad~~~~ 204 (243)
T 4g9b_A 154 IFLAACAGL-GVPPQACIGIEDAQAGIDAINASGMRSVGIG-AGL----TGAQLLLP 204 (243)
T ss_dssp HHHHHHHHH-TSCGGGEEEEESSHHHHHHHHHHTCEEEEES-TTC----CSCSEEES
T ss_pred HHHHHHHHc-CCChHHEEEEcCCHHHHHHHHHcCCEEEEEC-CCC----CcHHHhcC
Confidence 233334433 4 6789999999999999999973 4454 332 34676653
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=91.93 E-value=0.02 Score=57.24 Aligned_cols=87 Identities=15% Similarity=0.164 Sum_probs=54.1
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH----cCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecC--
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE----CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS-- 734 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~----~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~-- 734 (840)
+.|++.+.++.|+++|+++.++|+.....+..+.+. .+.. ..+.+. ..+....
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i------~~~~~~---------------~~~~~~KP~ 147 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIP------ATNMNP---------------VIFAGDKPG 147 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCC------TTTBCC---------------CEECCCCTT
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCcc------ccccch---------------hhhcCCCCC
Confidence 467899999999999999999999874433222222 2221 000000 0111122
Q ss_pred cccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 003189 735 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (840)
Q Consensus 735 P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgi 773 (840)
|+-.. +.+++. |- +.|+||..+|..+-+.|++-.
T Consensus 148 p~~~~---~~~~~~-g~-~l~VGDs~~Di~aA~~aG~~~ 181 (211)
T 2b82_A 148 QNTKS---QWLQDK-NI-RIFYGDSDNDITAARDVGARG 181 (211)
T ss_dssp CCCSH---HHHHHT-TE-EEEEESSHHHHHHHHHTTCEE
T ss_pred HHHHH---HHHHHC-CC-EEEEECCHHHHHHHHHCCCeE
Confidence 33333 334433 54 999999999999999999853
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=89.66 E-value=0.095 Score=59.50 Aligned_cols=96 Identities=13% Similarity=0.120 Sum_probs=58.8
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCC------CHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEe
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGD------NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR 732 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD------~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar 732 (840)
-++.|++.++++.|+++|+++.++|+- ......... .|+...-+.++.+.+.. .
T Consensus 99 ~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~--~~l~~~fd~i~~~~~~~------------------~ 158 (555)
T 3i28_A 99 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM--CELKMHFDFLIESCQVG------------------M 158 (555)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH--HHHHTTSSEEEEHHHHT------------------C
T ss_pred cCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHh--hhhhhheeEEEeccccC------------------C
Confidence 367899999999999999999999996 222222211 14332222233332221 1
Q ss_pred cCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEec
Q 003189 733 SSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMG 776 (840)
Q Consensus 733 ~~P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg 776 (840)
..|. ..-+.+.+++. | +.+.|+||..||..+.+.|++....-
T Consensus 159 ~KP~-p~~~~~~~~~l-g~~p~~~~~v~D~~~di~~a~~aG~~~~~~ 203 (555)
T 3i28_A 159 VKPE-PQIYKFLLDTL-KASPSEVVFLDDIGANLKPARDLGMVTILV 203 (555)
T ss_dssp CTTC-HHHHHHHHHHH-TCCGGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred CCCC-HHHHHHHHHHc-CCChhHEEEECCcHHHHHHHHHcCCEEEEE
Confidence 1222 12223333333 4 56888999999999999999976553
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=87.48 E-value=0.016 Score=56.79 Aligned_cols=41 Identities=12% Similarity=0.090 Sum_probs=36.1
Q ss_pred CCCCcchHHHHHHHHhC-CCEEEEEcCCCHHHHHHHHHHcCC
Q 003189 659 DPMRPGVKESVAICRSA-GITVRMVTGDNINTAKAIARECGI 699 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~a-Gi~v~m~TGD~~~ta~~iA~~~Gi 699 (840)
-++.|++.++++.|+++ |+++.++|+.....+..+.+.+|+
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 36789999999999999 999999999988777777777776
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=87.45 E-value=0.57 Score=43.28 Aligned_cols=41 Identities=12% Similarity=0.097 Sum_probs=35.1
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCC---HHHHHHHHHHcCCcc
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDN---INTAKAIARECGILT 701 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~---~~ta~~iA~~~Gi~~ 701 (840)
+-|++.++|+.++++|+.++++||.+ ...+...+++.|+..
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~ 68 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEF 68 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCe
Confidence 45799999999999999999999998 566777788888853
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=86.90 E-value=0.81 Score=50.52 Aligned_cols=40 Identities=13% Similarity=0.260 Sum_probs=33.8
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCC------------HHHHHHHHHHcCCc
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDN------------INTAKAIARECGIL 700 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~------------~~ta~~iA~~~Gi~ 700 (840)
+-|++.++++.|+++|+++.++|+.. ...+..+.+.+|+.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~ 139 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP 139 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC
Confidence 67999999999999999999999965 22367788888874
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=84.84 E-value=0.43 Score=46.16 Aligned_cols=90 Identities=13% Similarity=0.077 Sum_probs=63.6
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
.+||++.+.++.|++. +++.+.|.-....|..+.+.+|....-..++.+++ ....|.
T Consensus 55 ~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~~f~~~~~rd~----------------------~~~~k~ 111 (181)
T 2ght_A 55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFRARLFRES----------------------CVFHRG 111 (181)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTCCEEEEECGGG----------------------SEEETT
T ss_pred EeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCCcEEEEEeccC----------------------ceecCC
Confidence 4799999999999998 99999999999999999999997532111111111 111122
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccE
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgi 773 (840)
..++.|..- | +.+.++||..+|..+-..+++-|
T Consensus 112 ~~~k~L~~L-g~~~~~~vivdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 112 NYVKDLSRL-GRDLRRVLILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp EEECCGGGT-CSCGGGEEEECSCGGGGTTCTTSBCCC
T ss_pred cEeccHHHh-CCCcceEEEEeCCHHHhccCcCCEeEe
Confidence 234444433 4 57999999999998877776655
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=84.26 E-value=5.7 Score=49.13 Aligned_cols=164 Identities=17% Similarity=0.138 Sum_probs=82.1
Q ss_pred CCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecccccCCCCccccC---CCCCeEEeccEEeeceEEEEEE
Q 003189 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVN---ALNPFLLSGTKVQNGSCKMLVT 321 (840)
Q Consensus 245 dG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv~k~---~~~~~l~sGt~v~~G~~~~~V~ 321 (840)
-|....+..-|.+|-|.+.++.++. =+|=-.+.|++.-|.-+.-.-...|.... -.+..+.+|+...-=..++.=|
T Consensus 197 ~GDiV~l~~Gd~VPAD~~ll~~~~l-~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T 275 (1034)
T 3ixz_A 197 VGDLVEMKGGDRVPADIRILQAQGR-KVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRT 275 (1034)
T ss_pred CCcEEEEcCCceecCCeEEEEeCCc-eEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhh
Confidence 5888999999999999999986652 25666677766444433221122233322 1123466776432222222233
Q ss_pred EEcccchHHHHHHhhcCCCC-CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHH
Q 003189 322 TVGMRTQWGKLMATLSEGGD-DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEF 400 (840)
Q Consensus 322 ~vG~~T~~g~i~~~~~~~~~-~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (840)
..|. +.+++........ -...+.+....++.....+++++.++.++. ...+.. .+..+
T Consensus 276 ~~Gk---I~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~-----------------~~~~~ 334 (1034)
T 3ixz_A 276 IIGR---IASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCI-GYTFLR-----------------AMVFF 334 (1034)
T ss_pred HhhH---HHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHH-----------------HHHHH
Confidence 3332 1122222221111 112334444455544444444333333221 111110 23345
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 003189 401 FAIAVTIVVVAVPEGLPLAVTLSLAFAMKK 430 (840)
Q Consensus 401 ~~~ai~ilvva~P~~Lplav~l~l~~~~~~ 430 (840)
+..+++.+-.+.|..+++++.++.....++
T Consensus 335 i~l~v~~iPe~Lp~~vti~la~~~~rmak~ 364 (1034)
T 3ixz_A 335 MAIVVAYVPEGLLATVTVCLSLTAKRLASK 364 (1034)
T ss_pred HHHHHheeccccHHHHHHHHHHHHHHHhhC
Confidence 556677777788888888888877654443
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.76 E-value=0.37 Score=47.25 Aligned_cols=90 Identities=14% Similarity=0.073 Sum_probs=64.2
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
.+||++.+.++.|++. +++.+.|.-....|..+.+.+|+...-..++.+++ ....|.
T Consensus 68 ~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~f~~~l~rd~----------------------~~~~k~ 124 (195)
T 2hhl_A 68 LKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGVFRARLFRES----------------------CVFHRG 124 (195)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSCEEEEECGGG----------------------CEEETT
T ss_pred EeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCcccEEEEEEccc----------------------ceecCC
Confidence 5799999999999998 99999999999999999999998642111222211 111233
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccE
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgi 773 (840)
..++.|+.- | +.+.+++|..++..+-..|++-|
T Consensus 125 ~~lK~L~~L-g~~~~~~vivDDs~~~~~~~~~ngi~i 160 (195)
T 2hhl_A 125 NYVKDLSRL-GRELSKVIIVDNSPASYIFHPENAVPV 160 (195)
T ss_dssp EEECCGGGS-SSCGGGEEEEESCGGGGTTCGGGEEEC
T ss_pred ceeeeHhHh-CCChhHEEEEECCHHHhhhCccCccEE
Confidence 334444433 4 56999999999998877776554
|
| >3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0 | Back alignment and structure |
|---|
Probab=82.12 E-value=0.053 Score=43.65 Aligned_cols=57 Identities=28% Similarity=0.268 Sum_probs=47.4
Q ss_pred hccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChh
Q 003189 43 ANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPD 101 (840)
Q Consensus 43 ~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 101 (840)
..|..+.|+.+.+.+++..++||+.+.++.+.|++. ..+...+.++++..||.+.+.
T Consensus 14 ~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~--~~~~~~i~~~i~~~Gy~~~~~ 70 (74)
T 3dxs_X 14 AACSNSVEAALMNVNGVFKASVALLQNRADVVFDPN--LVKEEDIKEEIEDAGFEAEIL 70 (74)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTT--TCCHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCC--CCCHHHHHHHHHHCCCceEEc
Confidence 357778889999999999999999999999998665 456677888899999987654
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=81.66 E-value=1.1 Score=45.81 Aligned_cols=89 Identities=11% Similarity=0.079 Sum_probs=56.9
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHc--C---------CccCCCccccChhhhcCCHHHHhhhcCCce
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC--G---------ILTDNGIAIEGPEFREKSDEELSKLIPKIQ 728 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~--G---------i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 728 (840)
++.|++.+.++. |+++.++|..+...+..+-+.+ | +... |... +..
T Consensus 125 ~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~---------~~~~--------f~~-- 181 (253)
T 2g80_A 125 PVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSY---------IDGY--------FDI-- 181 (253)
T ss_dssp CCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGG---------CCEE--------ECH--
T ss_pred CCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhh---------cceE--------Eee--
Confidence 567899888887 9999999999999888877766 4 2110 0000 000
Q ss_pred EEEecCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccE
Q 003189 729 VMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (840)
Q Consensus 729 v~ar~~P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgi 773 (840)
+.+...|. ..-+.+.+++. | +.+.|+||..+|+.+-++|++-.
T Consensus 182 ~~~g~KP~-p~~~~~a~~~l-g~~p~~~l~vgDs~~di~aA~~aG~~~ 227 (253)
T 2g80_A 182 NTSGKKTE-TQSYANILRDI-GAKASEVLFLSDNPLELDAAAGVGIAT 227 (253)
T ss_dssp HHHCCTTC-HHHHHHHHHHH-TCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred eccCCCCC-HHHHHHHHHHc-CCCcccEEEEcCCHHHHHHHHHcCCEE
Confidence 00012332 12233333333 4 57899999999999999999753
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=80.78 E-value=0.71 Score=47.02 Aligned_cols=114 Identities=13% Similarity=0.138 Sum_probs=59.8
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHH--HHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCc
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINT--AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~t--a~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (840)
..++.|++.++++.|+ .|+++ ++|..+... +.. +. ..-..+. ..+...+..- ......|
T Consensus 124 ~~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~------~~------~~~~~l~----~~f~~~~~~~-~~~~~KP 184 (264)
T 1yv9_A 124 TELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERG------LL------PGAGSVV----TFVETATQTK-PVYIGKP 184 (264)
T ss_dssp TTCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTE------EE------ECHHHHH----HHHHHHHTCC-CEECSTT
T ss_pred CCcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCC------cc------cCCcHHH----HHHHHHhCCC-ccccCCC
Confidence 4567899999999997 89997 777755311 000 00 0000000 0011111100 1112223
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCC-ccCHHHhhhCCcc---EEecCCCcHHHHh---hcCEEec
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDG-TNDAPALHEADIG---LAMGIAGTEVAKE---SADVIIL 792 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG-~ND~~al~~Advg---iamg~~g~~~ak~---~aDivll 792 (840)
. ..+.+.+.+++| +.+.|+||+ .||..+.+.|++. +.+|....+..++ .+|+++.
T Consensus 185 ~--p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~ 249 (264)
T 1yv9_A 185 K--AIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVD 249 (264)
T ss_dssp S--HHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEES
T ss_pred C--HHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEe
Confidence 2 123333322224 579999999 6999999999986 4445222222233 5899874
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 840 | ||||
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 1e-37 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 2e-36 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 3e-32 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 3e-24 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 2e-20 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 2e-16 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 1e-18 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 2e-18 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 2e-12 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 4e-11 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 1e-07 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 2e-06 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 3e-06 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 2e-04 | |
| d1wzca1 | 243 | c.108.1.10 (A:1-243) Putative mannosyl-3-phosphogl | 4e-04 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 6e-04 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 7e-04 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 0.001 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 0.001 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 0.002 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 0.002 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 136 bits (343), Expect = 1e-37
Identities = 67/161 (41%), Positives = 91/161 (56%), Gaps = 6/161 (3%)
Query: 650 TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN----GI 705
T DP R V S+ +CR AGI V M+TGDN TA AI R GI +N
Sbjct: 10 TGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADR 69
Query: 706 AIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPA 765
A G EF + E + + AR P K +V++L++ A+TGDG NDAPA
Sbjct: 70 AYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEI-TAMTGDGVNDAPA 128
Query: 766 LHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWG 806
L +A+IG+AMG +GT VAK ++++++ DDNFSTIV + G
Sbjct: 129 LKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 139 bits (351), Expect = 2e-36
Identities = 42/390 (10%), Positives = 95/390 (24%), Gaps = 59/390 (15%)
Query: 433 NDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSS 492
+ + L +G + I + + + ++I S G +
Sbjct: 22 SALTVYELLMDKCYLGLHSHIDWETLTDNDIQDIRN-RIFQKDKILNKLKSLGLNSNWDM 80
Query: 493 IPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKI 552
+ S L+ + + L A + + Q
Sbjct: 81 LFIVFSIHLI----------------DILKKLSHDEIEAFMYQDEPVELKLQNISTNLAD 124
Query: 553 VKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHL 612
+ + V + + A+ + +++A + L
Sbjct: 125 CFNLNEQLPLQFLDNVKVGKNNIYAALEEFAT---------------TELHVSDATLFSL 169
Query: 613 NETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPM--RPGVKESVA 670
+ A E + L + G + + + VK +
Sbjct: 170 KGALWTLAQEVYQEWYLGSKLYEDVE----KKIARTTFKTGYIYQEIILRPVDEVKVLLN 225
Query: 671 ICRSAGITVRMVTGDNINTAKAIARECGILT--DNGIAIEGPEFREKSDEELSKL----- 723
+ AG + + TG G+L + + E +
Sbjct: 226 DLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKP 285
Query: 724 ----IPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD---IGLAMG 776
+ + + + V + GD D + + IG G
Sbjct: 286 NPFSYIAALYGNNRDKYESYINKQDNIVN-KDDVFIVGDSLADLLSAQKIGATFIGTLTG 344
Query: 777 IAGTEVAKE----SADVIILDDNFSTIVTV 802
+ G + A E AD +I ++ + V
Sbjct: 345 LKGKDAAGELEAHHADYVI--NHLGELRGV 372
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 122 bits (307), Expect = 3e-32
Identities = 44/212 (20%), Positives = 72/212 (33%), Gaps = 15/212 (7%)
Query: 466 MTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN----KT 521
MTV +I E D ++ + L + G+ N K
Sbjct: 2 MTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKR 61
Query: 522 EILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP--EGGFRVH 579
+ G +E+A+L+ L G + R + V FNS K + E +
Sbjct: 62 DTAGDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLV 121
Query: 580 CKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEI----- 634
KGA E IL C L G+ +PL++ + + R L + +
Sbjct: 122 MKGAPERILDRCSSIL-VQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKF 180
Query: 635 --GNEFSADAP-IPTEGYTCIGIVGIKDPMRP 663
G +F D PTE +G++ + D
Sbjct: 181 PRGFKFDTDELNFPTEKLCFVGLMSMIDHHHH 212
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 96.7 bits (240), Expect = 3e-24
Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 30/155 (19%)
Query: 650 TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEG 709
T G D ++ K +V + GI V M+TGDN +A+AI+RE
Sbjct: 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL------------ 58
Query: 710 PEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEA 769
V+A P K VK L+ EVVA GDG NDAPAL +A
Sbjct: 59 ---------------NLDLVIAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQA 101
Query: 770 DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804
D+G+A+G +G++VA ES D++++ D+ +V +
Sbjct: 102 DLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 135
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 92.8 bits (230), Expect = 2e-20
Identities = 42/177 (23%), Positives = 71/177 (40%), Gaps = 22/177 (12%)
Query: 342 DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFF 401
D+TPLQ KL+ + K+ V + + + G F + G + +F
Sbjct: 130 DKTPLQQKLDEFGEQLSKVISLICVAVWLINI-GHFNDPVH-------GGSWIRGAIYYF 181
Query: 402 AIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDK--TG 459
IAV + V A+PEGLP +T LA ++M A+VR L + ET+G A +
Sbjct: 182 KIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRY 241
Query: 460 TLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIG 516
+++N V+ + A G +LL ++ + +G
Sbjct: 242 LISSNVGEVVCIFLT------------AALGLPEALIPVQLLWVNLVTDGLPATALG 286
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 80.9 bits (199), Expect = 2e-16
Identities = 35/166 (21%), Positives = 54/166 (32%), Gaps = 13/166 (7%)
Query: 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMIL 179
E S T G++ + + R E YG N+ + W V E D+ + IL
Sbjct: 8 STEECLAYFGVSETTGLTPDQ--VKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRIL 65
Query: 180 AVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKIT 239
+ A +S V+ EG V ILL++ A Q E+
Sbjct: 66 LLAACISFVLAWFEEGEETITAFVEPFV--ILLILIANAIVGVWQ---------ERNAEN 114
Query: 240 VQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLIN 285
A + + D P G+Q+ + LIN
Sbjct: 115 AIEALKEYEPAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLIN 160
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 84.2 bits (207), Expect = 1e-18
Identities = 32/189 (16%), Positives = 57/189 (30%), Gaps = 31/189 (16%)
Query: 499 KLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQA------------- 545
+L N E +G TETA+ +
Sbjct: 52 ELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANAC 111
Query: 546 ---ERQASKIVKVEPFNSVKKQMGVVIELPEGG-----FRVHCKGASEIILAACDKFLNS 597
RQ K F+ +K M V + ++ KGA E ++ C+
Sbjct: 112 NSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV- 170
Query: 598 NGEVVPLNEAAVNHLNETIEKF--ASEALRTLCLACMEIGNEFSADAPIPTEGY------ 649
VP+ + I+++ + LR L LA + + + +
Sbjct: 171 GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETD 230
Query: 650 -TCIGIVGI 657
T +G+VG+
Sbjct: 231 LTFVGVVGM 239
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 83.1 bits (204), Expect = 2e-18
Identities = 27/210 (12%), Positives = 59/210 (28%), Gaps = 11/210 (5%)
Query: 612 LNETIEKFASEALRTLCLACM--EIGNEFSADAPIPTEGYTC----IGIVGIKDPMRPGV 665
+ ++ FA L + + + + V +R G
Sbjct: 21 IINIMKTFAPPEWMALKDGVLSKTLSIKEGVGRMFGLLPSSLKEEITSFVLEDAKIREGF 80
Query: 666 KESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP 725
+E VA I +++G + I F + +
Sbjct: 81 REFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDR--IYCNHASF-DNDYIHIDWPHS 137
Query: 726 KIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKE 785
+ K +++ L + + + GD D A +D+ A E ++
Sbjct: 138 CKGTCSNQCGCCKPSVIHELSEP-NQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQ 196
Query: 786 SADVIILDDNFSTIVTVAKWGRSVYINIQK 815
+ + + D F I + + V +Q
Sbjct: 197 NLNHLPYQD-FYEIRKEIENVKEVQEWLQN 225
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 62.0 bits (150), Expect = 2e-12
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 16/114 (14%)
Query: 239 TVQVARNGFR--RKISIYDLLPGDIVHLCMGDQVPADGLFVSGF--SVLINESSLTGESE 294
+V R + ++I D++PGDIV + +GD+VPAD +S ++ +++S LTGES
Sbjct: 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESV 61
Query: 295 PVNVNA------------LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATL 336
V + L SGT + G +V T G+ T+ GK+ +
Sbjct: 62 SVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.1 bits (147), Expect = 4e-11
Identities = 26/142 (18%), Positives = 52/142 (36%), Gaps = 8/142 (5%)
Query: 654 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR 713
I + PG++E V+ + + V +++G + + +A + I N A
Sbjct: 76 IAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKF-- 133
Query: 714 EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIG 772
+ + + K ++K L+ + + + GDG D A AD
Sbjct: 134 ----YFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAF 189
Query: 773 LAMG-IAGTEVAKESADVIILD 793
+ G + K++A I D
Sbjct: 190 IGFGGNVIRQQVKDNAKWYITD 211
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 51.3 bits (121), Expect = 1e-07
Identities = 28/145 (19%), Positives = 52/145 (35%), Gaps = 9/145 (6%)
Query: 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 719
G +E++ ++ G V +V+G I + G+ + + + D
Sbjct: 75 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGD-- 132
Query: 720 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779
+ + + + K L + VAV GDG ND +A + +A
Sbjct: 133 ----VEGEVLKENAKGEILEKIAKIEGINLEDTVAV-GDGANDISMFKKAGLKIAFC--A 185
Query: 780 TEVAKESADVIILDDNFSTIVTVAK 804
+ KE AD+ I + I+ K
Sbjct: 186 KPILKEKADICIEKRDLREILKYIK 210
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 47.2 bits (111), Expect = 2e-06
Identities = 16/77 (20%), Positives = 22/77 (28%), Gaps = 1/77 (1%)
Query: 718 EELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI 777
+L V + D +L V GD ND L EA G+
Sbjct: 113 HKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH- 171
Query: 778 AGTEVAKESADVIILDD 794
A V +E +
Sbjct: 172 APENVIREFPQFPAVHT 188
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 46.9 bits (110), Expect = 3e-06
Identities = 32/226 (14%), Positives = 55/226 (24%), Gaps = 11/226 (4%)
Query: 586 IILAACDK---FLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADA 642
I + D N + A+ T+ A
Sbjct: 2 IKAISIDIDGTITYPNRMIHEKALEAIRRAESLGIPIMLVTGNTVQFA-EAASILIGTSG 60
Query: 643 PIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD 702
P+ E I + + +E + I R T I+ +
Sbjct: 61 PVVAEDGGAISYKKKRIFLASMDEEWILWNE---IRKRFPNARTSYTMPDRRAGLVIMRE 117
Query: 703 NGIAIEGPEFREKSDEELSKLIPK--IQVMARSSPMDKHTLVKHLRTTLG-EVVAVTGDG 759
E + + L + I V + + VA GDG
Sbjct: 118 TINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 177
Query: 760 TNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805
ND A +A+ A ++ KE+AD + +
Sbjct: 178 ENDLDAFKVVGYKVAVAQA-PKILKENADYVTKKEYGEGGAEAIYH 222
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 41.8 bits (97), Expect = 2e-04
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 751 EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795
E AV GD ND L A G+AMG A E K AD + L ++
Sbjct: 231 ETAAV-GDSLNDKSMLEAAGKGVAMGNA-REDIKSIADAVTLTND 273
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 40.4 bits (93), Expect = 4e-04
Identities = 14/50 (28%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 741 LVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVI 790
L + R E AV GD ND P D +G + A+ + +I
Sbjct: 188 LDFYKRLGQIESYAV-GDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSII 236
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 40.4 bits (93), Expect = 6e-04
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 751 EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795
+ V V GD ND L A+ A T+ AK A ++ +
Sbjct: 224 DQVLVVGDAENDIAMLSNFKYSFAVANA-TDSAKSHAKCVLPVSH 267
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 40.0 bits (92), Expect = 7e-04
Identities = 30/221 (13%), Positives = 57/221 (25%), Gaps = 68/221 (30%)
Query: 654 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-----------CGILTD 702
+ + ES+ G+TV +++G+ I A+ GI+ D
Sbjct: 14 LTDRDRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFD 73
Query: 703 NGIAIE----------------------------------GPEFREKSDEELSKLIPKIQ 728
N +I+ G + + + + K
Sbjct: 74 NDGSIKKFFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRG 133
Query: 729 VMARSSPMDKHTLVKHLRTTLG------------EVVAVTGDGTNDAPALHEADIGLAMG 776
+ S H + + + + V GD ND P
Sbjct: 134 FVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPA 193
Query: 777 IAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFV 817
A T+ K +D V+ +G + + F
Sbjct: 194 NA-TDNIKAVSD----------FVSDYSYGEEIGQIFKHFE 223
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 39.6 bits (91), Expect = 0.001
Identities = 37/240 (15%), Positives = 67/240 (27%), Gaps = 40/240 (16%)
Query: 594 FLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIG 653
LN N E+ + + L+ + R L F P +
Sbjct: 13 LLNDNLEISEKDRRNIEKLSRKCYVVFASG-RMLVSTLNVEKKYFKRTFPTIAYNGAIVY 71
Query: 654 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR 713
+ + + VA I V + + + ++R
Sbjct: 72 LPEEGVILNEKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYR 131
Query: 714 EKSD-EELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVT---------------- 756
+ + EL + +++ +P L + L +VV V
Sbjct: 132 VEPNLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDK 191
Query: 757 ---------------------GDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795
GD ND EA + +AM A E KE++D++ L +N
Sbjct: 192 GKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENA-IEKVKEASDIVTLTNN 250
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 39.2 bits (90), Expect = 0.001
Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 751 EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795
E + GD ND + A +G+A+ A KE A+ + +
Sbjct: 214 EEIMAIGDQENDIAMIEYAGVGVAVDNA-IPSVKEVANFVTKSNL 257
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 38.7 bits (89), Expect = 0.002
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 4/63 (6%)
Query: 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIIL 792
K + + G E GDG ND L A IG+AMG A E K +AD +
Sbjct: 185 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQA-KEDVKAAADYVTA 243
Query: 793 DDN 795
+
Sbjct: 244 PID 246
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 38.4 bits (88), Expect = 0.002
Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 4/66 (6%)
Query: 751 EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVY 810
+ V GD NDA L A AMG A E K+ A D+N + V + V
Sbjct: 207 QNVVAIGDSGNDAEMLKMARYSFAMGNA-AENIKQIARYATDDNNHEGALNVIQA---VL 262
Query: 811 INIQKF 816
N F
Sbjct: 263 DNTYPF 268
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 840 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 100.0 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.96 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.96 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.95 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.93 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.92 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.88 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.28 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.23 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.14 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.13 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.09 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.08 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.06 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.01 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.0 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.98 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.97 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.81 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.79 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.7 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.68 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.44 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.07 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.91 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.85 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.63 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.58 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.57 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.47 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.28 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 96.97 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 96.97 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.9 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.89 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.78 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 96.57 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.52 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.47 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 96.47 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 95.79 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 95.52 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 95.0 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 94.87 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 94.76 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 93.69 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 93.49 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 93.31 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 93.2 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 92.48 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 92.43 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 91.98 | |
| d2aw0a_ | 72 | Menkes copper-transporting ATPase {Human (Homo sap | 91.42 | |
| d1cpza_ | 68 | Copper chaperone {Enterococcus hirae [TaxId: 1354] | 91.14 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 90.03 | |
| d1q8la_ | 84 | Menkes copper-transporting ATPase {Human (Homo sap | 89.81 | |
| d2qifa1 | 69 | Copper chaperone {Bacillus subtilis, CopZ [TaxId: | 89.41 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 89.29 | |
| d1osda_ | 72 | Mercuric ion binding protein MerP {Ralstonia metal | 89.04 | |
| d1p6ta1 | 72 | Potential copper-translocating P-type ATPase CopA | 87.72 | |
| d1mwza_ | 73 | Metal ion-transporting ATPase ZntA, N-terminal dom | 87.67 | |
| d1p6ta2 | 79 | Potential copper-translocating P-type ATPase CopA | 86.93 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 86.86 | |
| d2ggpb1 | 72 | Copper transporter domain ccc2a {Baker's yeast (Sa | 86.37 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 85.7 | |
| d1kvja_ | 79 | Menkes copper-transporting ATPase {Human (Homo sap | 84.91 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 84.34 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 82.85 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=4.9e-35 Score=283.12 Aligned_cols=147 Identities=46% Similarity=0.683 Sum_probs=141.3
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC----ccccChhhhcCCHHHHhhhcCCceEEEec
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----IAIEGPEFREKSDEELSKLIPKIQVMARS 733 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (840)
-||+||+++++|+.|+++||+|+|+|||+..||.++|+++||..++. ..++|.++..++..++.+.+++..+|+|+
T Consensus 18 ~Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 97 (168)
T d1wpga2 18 LDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARV 97 (168)
T ss_dssp ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESC
T ss_pred cCCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhcc
Confidence 39999999999999999999999999999999999999999987654 45789999999999999999999999999
Q ss_pred CcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHH
Q 003189 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWG 806 (840)
Q Consensus 734 ~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~g 806 (840)
+|+||..+|+.||+. |++|+|+|||.||+|||++|||||+|| +|+++|+++||++|++|+|++|+++|+||
T Consensus 98 ~p~~K~~lv~~l~~~-g~~Va~vGDG~nD~~AL~~AdvGIa~~-~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 98 EPSHKSKIVEYLQSY-DEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp CHHHHHHHHHHHHHT-TCCEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhc-ccceeEEecCCCCHHHHHhCCEEEEec-cccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 999999999999999 999999999999999999999999999 99999999999999999999999999998
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.96 E-value=4.5e-29 Score=252.68 Aligned_cols=198 Identities=21% Similarity=0.244 Sum_probs=153.9
Q ss_pred eEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCC----ceeEcCChhhHHHHHHHHHcCC
Q 003189 466 MTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGG 541 (840)
Q Consensus 466 m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~~~~~~~ 541 (840)
|+|+++|+.++.++.+.............+..+..+.+++++|+++.+..++.+ .+...|+|+|.||+.|+.+.+.
T Consensus 2 MTV~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~~ 81 (214)
T d1q3ia_ 2 MTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCG 81 (214)
T ss_dssp CEEEEEEETTEEEECCCC------CCCCCSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHHHS
T ss_pred eEEEEEEECCEEEEcCCCCcCCCcccccCCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHhCC
Confidence 899999999998875543332222223344566667788888888877654332 3456899999999999999999
Q ss_pred ChHHHhhccceEEEecCCCCCceEEEEEEeC--CCcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHH
Q 003189 542 DFQAERQASKIVKVEPFNSVKKQMGVVIELP--EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKF 619 (840)
Q Consensus 542 ~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~--~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~ 619 (840)
+....+..++++..+||+|.+|+|+++++.+ ++.+++|+|||||.||++|++++. +|...+|+++.++.+.+.+++|
T Consensus 82 ~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~-~g~~~~l~~~~~~~i~~~~~~~ 160 (214)
T d1q3ia_ 82 SVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILV-QGKEIPLDKEMQDAFQNAYLEL 160 (214)
T ss_dssp CHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHH
T ss_pred CHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheee-CCceeechHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999875 356889999999999999998875 7899999999999999999999
Q ss_pred HHcccceeEEEEEEcCCCC--------CCCCCCCCCceeeeeeecccCCCCcc
Q 003189 620 ASEALRTLCLACMEIGNEF--------SADAPIPTEGYTCIGIVGIKDPMRPG 664 (840)
Q Consensus 620 ~~~glr~l~~A~~~~~~~~--------~~~~~~~~~~~~~lg~~~~~D~lR~~ 664 (840)
+++|+|||+||||+++.+. ..+.+..+++|+|+|++||.||||++
T Consensus 161 a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 161 GGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp HHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred hhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 9999999999999997542 11234567899999999999999975
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.96 E-value=3e-30 Score=239.32 Aligned_cols=126 Identities=40% Similarity=0.609 Sum_probs=111.0
Q ss_pred eeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCce
Q 003189 649 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ 728 (840)
Q Consensus 649 ~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 728 (840)
.+..+.++++|++||+++++|+.|+++|++++|+|||+..+|.++|++|||..
T Consensus 10 ~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~--------------------------- 62 (135)
T d2b8ea1 10 KTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL--------------------------- 62 (135)
T ss_dssp CCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------------
T ss_pred CceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhh---------------------------
Confidence 34456789999999999999999999999999999999999999999999965
Q ss_pred EEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 729 VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 729 v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
++++++|++|..+|+.+|+ |++|+|+|||.||+|||++|||||||| +++++++++||++|++++|++|+++|+
T Consensus 63 v~~~~~p~~k~~~v~~~q~--~~~v~~vGDg~nD~~aL~~Advgia~~-~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 63 VIAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp EECSCCHHHHHHHHHHHTT--TSCEEEEECSSSSHHHHHHSSEEEEEC-CC--------SEEESSCCTHHHHHHHC
T ss_pred hccccchhHHHHHHHHHHc--CCEEEEEeCCCCcHHHHHhCCeeeecC-ccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 9999999999999999985 579999999999999999999999999 899999999999999999999999874
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.95 E-value=2.6e-28 Score=276.64 Aligned_cols=241 Identities=24% Similarity=0.358 Sum_probs=190.8
Q ss_pred cCHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCC-
Q 003189 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWP- 197 (840)
Q Consensus 119 ~gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~- 197 (840)
.+++++++.|++|+++||+++| +++|+++||+|++++++++|+|+.++++|+|+++++|++++++|++++...++..
T Consensus 7 ~~~e~v~~~l~td~~~GLs~~e--a~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~ 84 (472)
T d1wpga4 7 KSTEECLAYFGVSETTGLTPDQ--VKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGEET 84 (472)
T ss_dssp SCHHHHHHHHTCCTTTCBCHHH--HHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCTTST
T ss_pred CCHHHHHHHhCcCcccCcCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhccccc
Confidence 4799999999999999999877 9999999999999999999999999999999999999999999999998765543
Q ss_pred -CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEECCeEEEEeccCCCCCcEEEecCCCcccccEEE
Q 003189 198 -KGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLF 276 (840)
Q Consensus 198 -~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvl 276 (840)
..|+|++.|++.+++...++.+++++.++....+.+...+
T Consensus 85 ~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~--------------------------------------- 125 (472)
T d1wpga4 85 ITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPA--------------------------------------- 125 (472)
T ss_dssp TSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCC---------------------------------------
T ss_pred chhHhHhhhhhheeeeeeeEEeEEechHHHHHHHHhhhccc---------------------------------------
Confidence 4799998887777666666655555544444444331110
Q ss_pred EeecceEEecccccCCCCccccCCCCCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCCCChHHHHHHHHHHH
Q 003189 277 VSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATI 356 (840)
Q Consensus 277 l~g~~l~VDES~LTGES~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~ 356 (840)
....+++|+|.++++++..
T Consensus 126 -------------------------------------------------------------~~~~~~~P~d~~l~~~g~~ 144 (472)
T d1wpga4 126 -------------------------------------------------------------ATEQDKTPLQQKLDEFGEQ 144 (472)
T ss_dssp -------------------------------------------------------------CCCCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------------------------------cccccCchHHHHHHHHHHH
Confidence 0112458999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhcccc
Q 003189 357 IGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKA 436 (840)
Q Consensus 357 ~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~i 436 (840)
++..+..++..++...+.++. . . .........+.+.|..+++++|+++|||||+++|++++++++||+|+|+
T Consensus 145 i~~~~~~~~~~~~~~~~~~~~-~-~------~~~~~~~~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~rmak~~~ 216 (472)
T d1wpga4 145 LSKVISLICVAVWLINIGHFN-D-P------VHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNA 216 (472)
T ss_dssp HHHHHHHHHHHHHHHCCTTSS-S-C------CSSSCSSSCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTE
T ss_pred HHHHHHHHHHHHHHHHHHHHH-H-H------HhhhhhHHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHhccc
Confidence 888777666655544322111 0 0 1111122246678899999999999999999999999999999999999
Q ss_pred ccccchhhhccCCeeEEEeccc--CccccCceEEE
Q 003189 437 LVRHLAACETMGSATSICSDKT--GTLTTNHMTVL 469 (840)
Q Consensus 437 lvr~~~a~E~lg~v~~I~~DKT--GTLT~n~m~v~ 469 (840)
+||++++||++|+.+++|+||| +|||.|-+.+.
T Consensus 217 lVr~L~avE~~g~~~~~~~~k~i~~~l~~n~~~v~ 251 (472)
T d1wpga4 217 IVRSLPSVETLGRAIYNNMKQFIRYLISSNVGEVV 251 (472)
T ss_dssp EESCTTHHHHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHhHHhhhhhhhhhHHHHH
Confidence 9999999999999999999998 99999877663
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.93 E-value=4.8e-32 Score=299.11 Aligned_cols=322 Identities=12% Similarity=0.043 Sum_probs=220.1
Q ss_pred ccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCC
Q 003189 439 RHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEG 518 (840)
Q Consensus 439 r~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 518 (840)
+-+.+.|+||..+++|+|||||+|.|+|++..+.........+. ..++.+ ..++....++.+ +...
T Consensus 28 ~ll~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~--------~g~n~~-~dl~~~~~~~~~-~~~~---- 93 (380)
T d1qyia_ 28 ELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKS--------LGLNSN-WDMLFIVFSIHL-IDIL---- 93 (380)
T ss_dssp HHHHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHH--------TTCCCH-HHHHHHHHHHHH-HHHH----
T ss_pred HHhhchhhcccceeeecCcccchhhhhheeeeecchhhhHhhhh--------cCCChh-HHHHHHHHHHHH-HHHH----
Confidence 34567799999999999999999999998754321111100000 011111 122211111111 1111
Q ss_pred CceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccC
Q 003189 519 NKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSN 598 (840)
Q Consensus 519 ~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~ 598 (840)
...++|++.+++......+..+...++.+......||++.+|+|+++....++.+....+|+++.+.
T Consensus 94 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~---------- 160 (380)
T d1qyia_ 94 ---KKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH---------- 160 (380)
T ss_dssp ---TTSCHHHHHHHHHCSSCHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTT----------
T ss_pred ---hhcCCCcHHHHHHHHhhccchHHHHHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcC----------
Confidence 1256788888876554333334455666777778999999999987655444444444556655431
Q ss_pred CceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCc--chHHHHHHHHhCC
Q 003189 599 GEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP--GVKESVAICRSAG 676 (840)
Q Consensus 599 g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~--~~~~aI~~l~~aG 676 (840)
+++..+..+...+..++.+|+|++++||+.++.... ....+....|+++.+||+|| +++++++.|+++|
T Consensus 161 -----~~~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~~----~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aG 231 (380)
T d1qyia_ 161 -----VSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEK----KIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAG 231 (380)
T ss_dssp -----CSCCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHHC----SCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTT
T ss_pred -----CcHHHHHHHHhHHHHHHHHHHHHHHHhhhccccccc----ccchhhHhcccccccccccchhhHHHHHHHHHHCC
Confidence 222334446667788999999999999876542211 11233445789999999766 9999999999999
Q ss_pred CEEEEEcCCCHHHHHHHHHHcCCccCC--CccccChhhhcC-------------CHHHHhhhcCCceEEEecCcccHHHH
Q 003189 677 ITVRMVTGDNINTAKAIARECGILTDN--GIAIEGPEFREK-------------SDEELSKLIPKIQVMARSSPMDKHTL 741 (840)
Q Consensus 677 i~v~m~TGD~~~ta~~iA~~~Gi~~~~--~~~~~g~~~~~~-------------~~~~~~~~~~~~~v~ar~~P~~K~~~ 741 (840)
+++.|+|||+..+|.++++++||.... ..++++.+.... .++.+. ...+++|.+|.+|..+
T Consensus 232 i~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~----~~~~~~~~~~~~k~~i 307 (380)
T d1qyia_ 232 FELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYI----AALYGNNRDKYESYIN 307 (380)
T ss_dssp CEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHH----HHHHCCCGGGHHHHHH
T ss_pred CeEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHH----HHHHHcCCCHHHHHHH
Confidence 999999999999999999999997532 234444443211 111111 2236789999999999
Q ss_pred HHHHHHhCCCEEEEEcCCccCHHHhhhCC---ccEEecCCCcHHHHh----hcCEEeccCCchHHHHHH
Q 003189 742 VKHLRTTLGEVVAVTGDGTNDAPALHEAD---IGLAMGIAGTEVAKE----SADVIILDDNFSTIVTVA 803 (840)
Q Consensus 742 V~~l~~~~g~~v~~~GDG~ND~~al~~Ad---vgiamg~~g~~~ak~----~aDivlldd~f~~i~~~i 803 (840)
++.++.. ++.|+|||||.||+||++.|| |||+||..|++..++ .||+|+ +++..|.+++
T Consensus 308 v~~~~~~-~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii--~~~~el~~il 373 (380)
T d1qyia_ 308 KQDNIVN-KDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI--NHLGELRGVL 373 (380)
T ss_dssp CCTTCSC-TTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEE--SSGGGHHHHH
T ss_pred HHHhCCC-CCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEE--CCHHHHHHHH
Confidence 9999988 999999999999999999999 999999888877655 799999 5688887664
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.92 E-value=9.6e-26 Score=201.59 Aligned_cols=98 Identities=35% Similarity=0.515 Sum_probs=89.2
Q ss_pred eEEEEECCeE--EEEeccCCCCCcEEEecCCCcccccEEEEeec--ceEEecccccCCCCccccCC------------CC
Q 003189 239 TVQVARNGFR--RKISIYDLLPGDIVHLCMGDQVPADGLFVSGF--SVLINESSLTGESEPVNVNA------------LN 302 (840)
Q Consensus 239 ~v~V~RdG~~--~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~--~l~VDES~LTGES~pv~k~~------------~~ 302 (840)
.++|+|+|++ ++|++.||||||||.|++||+|||||+|++++ ++.||||+|||||.|+.|.. ..
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~ 81 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK 81 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence 5789999984 78999999999999999999999999998754 48899999999999999952 35
Q ss_pred CeEEeccEEeeceEEEEEEEEcccchHHHHHHhh
Q 003189 303 PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATL 336 (840)
Q Consensus 303 ~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~ 336 (840)
|++|+||.|.+|+++++|++||.+|++|+|++++
T Consensus 82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred ceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence 6899999999999999999999999999998764
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.88 E-value=4.2e-22 Score=204.58 Aligned_cols=161 Identities=20% Similarity=0.185 Sum_probs=131.8
Q ss_pred hHHHHHHHHHHhcCCceEEec-CCCceeEcCChhhHHHHHHHHHcCCChHH----------------HhhccceEEEecC
Q 003189 496 SASKLLLQSIFNNTGGEVVIG-EGNKTEILGTPTETAILEFGLLLGGDFQA----------------ERQASKIVKVEPF 558 (840)
Q Consensus 496 ~~~~~l~~~i~~~~~~~~~~~-~~~~~~~~g~p~e~All~~~~~~~~~~~~----------------~~~~~~i~~~~pF 558 (840)
+.+..+..+.++|+++.+..+ +++.+...|+|+|.||+.++.+.|++... .+..+++++.+||
T Consensus 48 ~~l~~ll~~~~LCn~a~l~~~~~~~~~~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~pF 127 (239)
T d1wpga3 48 DGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEF 127 (239)
T ss_dssp HHHHHHHHHHHHSCSCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCEeeecCCCCeEEEcCCCCcHHHHHHHHHhCCChHHhhccchhhhhccchhhhhhhCeEEEEeee
Confidence 344556667778888888765 34677889999999999999998875432 3567899999999
Q ss_pred CCCCceEEEEEEeCCC-----cEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHH--HHcccceeEEEE
Q 003189 559 NSVKKQMGVVIELPEG-----GFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKF--ASEALRTLCLAC 631 (840)
Q Consensus 559 ~s~~k~~~vv~~~~~~-----~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~--~~~glr~l~~A~ 631 (840)
+|.||+|+++++.+++ .+.+|+|||||.||++|++++. +|...|++++.++.+.+.++++ +++|+|||+|||
T Consensus 128 ~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A~ 206 (239)
T d1wpga3 128 SRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALAT 206 (239)
T ss_dssp ETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEEE
T ss_pred cccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceec-CCceeeCCHHHHHHHHHHHHHHhHhhCCCEEEEEEE
Confidence 9999999999997654 3789999999999999998875 6778899999999999999986 679999999999
Q ss_pred EEcCCCCCCC-------CCCCCCceeeeeeecc
Q 003189 632 MEIGNEFSAD-------APIPTEGYTCIGIVGI 657 (840)
Q Consensus 632 ~~~~~~~~~~-------~~~~~~~~~~lg~~~~ 657 (840)
|+++.+.... ...+|++|+|+|++||
T Consensus 207 k~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 207 RDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp ESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred EECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence 9997653211 1234789999999986
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.28 E-value=7.3e-12 Score=125.70 Aligned_cols=145 Identities=20% Similarity=0.227 Sum_probs=107.9
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhh--------------------------
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR-------------------------- 713 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~-------------------------- 713 (840)
.+.+.+.+++++|+++|+.++++||++...+..++..+++..+ -..-+|..+.
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~-~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGP-VVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 97 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSC-EEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcc-cccccceeeeccccccccccccHHHHHHHHHHHhcc
Confidence 4678899999999999999999999999999999999988532 0000110000
Q ss_pred --------------------cCCHHHHh---hhc-CC-------ceEEEecCcccHHHHHHHHHHhCC---CEEEEEcCC
Q 003189 714 --------------------EKSDEELS---KLI-PK-------IQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDG 759 (840)
Q Consensus 714 --------------------~~~~~~~~---~~~-~~-------~~v~ar~~P~~K~~~V~~l~~~~g---~~v~~~GDG 759 (840)
....+.+. +.+ .. ..+-.......|...++.+.+++| +.++++|||
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~ 177 (230)
T d1wr8a_ 98 NARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 177 (230)
T ss_dssp TCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred cccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecC
Confidence 00111111 111 11 112223345789999999877655 579999999
Q ss_pred ccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHH
Q 003189 760 TNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWG 806 (840)
Q Consensus 760 ~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~g 806 (840)
.||.|||+.|++||||| ++.+.+|+.||+|+.+++...+.++++..
T Consensus 178 ~NDi~ml~~ag~~vav~-na~~~~k~~A~~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 178 ENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp GGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHHH
T ss_pred ccHHHHHHHCCeEEEEC-CCCHHHHHhCCEEECCCCcCHHHHHHHHH
Confidence 99999999999999999 89999999999999999999998887653
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.23 E-value=3.2e-11 Score=121.15 Aligned_cols=146 Identities=18% Similarity=0.144 Sum_probs=106.8
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhh--------cC--------------
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR--------EK-------------- 715 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~--------~~-------------- 715 (840)
+.++.+++.++++.|++.|++++++||++...+..++..+|+... -+..+|.... ..
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~-~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGP-VFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSK 96 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSC-EEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCce-EEeecceEEEeCCccEEEecChHHHHHHHHHHHH
Confidence 445678999999999999999999999999999999999998542 0000110000 00
Q ss_pred ---------------------C---HHHHhhhc--CCceEEE-------ecCcccHHHHHHHHHHhCC---CEEEEEcCC
Q 003189 716 ---------------------S---DEELSKLI--PKIQVMA-------RSSPMDKHTLVKHLRTTLG---EVVAVTGDG 759 (840)
Q Consensus 716 ---------------------~---~~~~~~~~--~~~~v~a-------r~~P~~K~~~V~~l~~~~g---~~v~~~GDG 759 (840)
. .+.+.... ....++. .....+|...++.+.+.+| +.|+++|||
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs 176 (225)
T d1l6ra_ 97 RTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDS 176 (225)
T ss_dssp TSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCS
T ss_pred hcCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCC
Confidence 0 01111110 1111211 1234689999999887755 458889999
Q ss_pred ccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 003189 760 TNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (840)
Q Consensus 760 ~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~ 805 (840)
.||.+|++.|++||||+ ++.+.+|+.||+|+..++..+|.++++.
T Consensus 177 ~nD~~m~~~a~~~vav~-na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 177 NNDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp GGGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred cchHHHHHHCCeEEEEC-CCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 99999999999999999 8999999999999999999999988763
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.14 E-value=5e-11 Score=123.07 Aligned_cols=68 Identities=26% Similarity=0.343 Sum_probs=60.1
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
.+|...++.+.+++| ..++++|||.||.+||+.|++|+||+ ++.+..|+.||+|...++=.++.++++
T Consensus 196 ~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~-na~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 196 VNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCcChHHHHHH
Confidence 479999999988755 45899999999999999999999999 899999999999998777777877765
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.13 E-value=9e-11 Score=112.74 Aligned_cols=99 Identities=20% Similarity=0.287 Sum_probs=87.0
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHH
Q 003189 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (840)
Q Consensus 667 ~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~ 746 (840)
.+|+.++..|+.+.++||+....+...++++++.. ++. ...+|...++.+.
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~---------------------------~~~--~~~~K~~~l~~~~ 89 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL---------------------------FFL--GKLEKETACFDLM 89 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------EEE--SCSCHHHHHHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc---------------------------ccc--ccccHHHHHHHHH
Confidence 48999999999999999999999999999999863 333 4567888887776
Q ss_pred HhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCC
Q 003189 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795 (840)
Q Consensus 747 ~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~ 795 (840)
+++| +.|+++||+.||.|||+.|++|+||+ ++.+.+|+.||+|+....
T Consensus 90 ~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~-nA~~~vk~~A~~Vt~~~G 140 (177)
T d1k1ea_ 90 KQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHG 140 (177)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCT
T ss_pred HHhcCCcceeEEecCCccHHHHHhhCCeEEEcC-CccHHHHHhCCEEeCCCC
Confidence 6545 78999999999999999999999999 999999999999997765
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.09 E-value=9.9e-11 Score=116.99 Aligned_cols=126 Identities=21% Similarity=0.288 Sum_probs=93.2
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC------ccccChhhhcCCHHHHhhhcCCceEEEec
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG------IAIEGPEFREKSDEELSKLIPKIQVMARS 733 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~------~~~~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (840)
+++|++.+.++.|++.|++++++||.....+..+++.+||...+. ...+|.-.-.. . .....
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~----------~--~~p~~ 149 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFD----------E--TQPTA 149 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEEC----------T--TSGGG
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccce----------e--eeeee
Confidence 368999999999999999999999999999999999999964210 00011100000 0 00003
Q ss_pred CcccHHHHHHHHHHhCC-CEEEEEcCCccCHHHhhhCCccEEecC-CCcHHHHhhcCEEeccCCchHH
Q 003189 734 SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGLAMGI-AGTEVAKESADVIILDDNFSTI 799 (840)
Q Consensus 734 ~P~~K~~~V~~l~~~~g-~~v~~~GDG~ND~~al~~Advgiamg~-~g~~~ak~~aDivlldd~f~~i 799 (840)
.+..|..+++.++++.+ +.+.++|||.||.+|++.||++||+|. ...+..++.+|.++.+ |..+
T Consensus 150 ~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~--f~el 215 (217)
T d1nnla_ 150 ESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD--FVEL 215 (217)
T ss_dssp STTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC--GGGG
T ss_pred ccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCC--HHHh
Confidence 45779999999987644 568999999999999999999999973 2445677889999854 6544
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.08 E-value=9.5e-11 Score=120.86 Aligned_cols=68 Identities=28% Similarity=0.318 Sum_probs=61.0
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
.+|...++.|++++| +.|.++|||.||.|||+.|+.|+||+ ++.+.+|+.||+|+.+.+-.++..+++
T Consensus 189 ~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~-Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 189 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred hHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 579999999988766 46899999999999999999999999 899999999999998888888887775
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.06 E-value=3.3e-10 Score=117.64 Aligned_cols=68 Identities=32% Similarity=0.414 Sum_probs=61.5
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
.+|...++.+.+.+| +.|+++|||.||.+||+.|+.|+||+ ++++.+|+.||+|....+-.+|.++++
T Consensus 212 ~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~-na~~~~k~~A~~v~~~~~~~Gv~~~l~ 282 (285)
T d1nrwa_ 212 ASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMK 282 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred chhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 389999999988866 56999999999999999999999999 899999999999998877788887775
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.01 E-value=2.2e-10 Score=114.82 Aligned_cols=146 Identities=14% Similarity=0.095 Sum_probs=106.1
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC---CCccccChhhhcCCHHHHhhhcCCceEEEecCcc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD---NGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~ 736 (840)
+++|++.+.++.|++.|+++.++|+.....+..+.+++|+... +.....+...... ...+.........|.
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~------~~~~~~~~~~~~k~~ 148 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHID------WPHSCKGTCSNQCGC 148 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEE------CTTCCCTTCCSCCSS
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceec------cccccccccccCCHH
Confidence 4789999999999999999999999999999999999997542 0111111111000 000111133456789
Q ss_pred cHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHH-hhcCEEeccCCchHHHHHHHHHHHHHHHHH
Q 003189 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAK-ESADVIILDDNFSTIVTVAKWGRSVYINIQ 814 (840)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak-~~aDivlldd~f~~i~~~i~~gR~~~~~i~ 814 (840)
.|..+++.++.. ++.|.|+||+.||.+|++.||+++|++ ...+.++ +..+++. -++|..|...++.-..+.+.|+
T Consensus 149 ~~~~~~~~~~~~-~~~~i~iGDs~~Dl~~a~~A~~~~a~~-~~~~~~~~~~~~~~~-~~d~~~i~~~l~~~~~~~~~~~ 224 (226)
T d2feaa1 149 CKPSVIHELSEP-NQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLP-YQDFYEIRKEIENVKEVQEWLQ 224 (226)
T ss_dssp CHHHHHHHHCCT-TCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEEC-CSSHHHHHHHHHTSHHHHHHHT
T ss_pred HHHHHHHHhcCC-CceEEEEeCchhhHHHHHHCCEEEEec-chHHHHHHcCCCeee-cCCHHHHHHHHHHHHHHHHHhh
Confidence 999999999877 889999999999999999999999998 5445444 4455544 4579999988877666655543
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.00 E-value=5.7e-10 Score=115.39 Aligned_cols=67 Identities=24% Similarity=0.277 Sum_probs=56.7
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCC-chHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN-FSTIVTVA 803 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~-f~~i~~~i 803 (840)
..|...++.+.+.++ +.|+++|||.||.+||+.||+|+||+ ++.+.+|+.||+|+..++ -..+..++
T Consensus 206 ~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~-na~~~~k~~a~~v~~~~~~~g~v~~~l 276 (283)
T d2b30a1 206 HDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLL 276 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHH
T ss_pred chhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeC-CCCHHHHHhCCEEECCcCCCcHHHHHH
Confidence 589999999887755 57999999999999999999999999 999999999999997544 34455554
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.98 E-value=2.9e-10 Score=116.74 Aligned_cols=69 Identities=30% Similarity=0.365 Sum_probs=61.7
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~ 805 (840)
..|...++.|.+++| +.++++|||.||.+||+.|+.|+||+ ++++.+|+.||+|..+++-.++.++++.
T Consensus 185 ~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~-na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 185 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeC-CCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 579999999987755 56888999999999999999999999 9999999999999988888888888753
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.97 E-value=1e-09 Score=112.90 Aligned_cols=68 Identities=32% Similarity=0.455 Sum_probs=60.9
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
.+|...|+.+.+++| ..|+++|||.||.|||+.|++|+||| ++.+.+|+.||+|+.+++-.++..+++
T Consensus 189 ~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~-na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 189 VDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp CCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred CchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 479999999887755 45888899999999999999999999 999999999999999888888887764
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.81 E-value=4.3e-09 Score=103.11 Aligned_cols=133 Identities=17% Similarity=0.202 Sum_probs=95.1
Q ss_pred ccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEe--cC
Q 003189 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR--SS 734 (840)
Q Consensus 657 ~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar--~~ 734 (840)
...++.+++.+.++.++..|..+.++||.....+....++.++...-...+...... ....... ..
T Consensus 72 ~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~ 139 (210)
T d1j97a_ 72 KRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGK------------LTGDVEGEVLK 139 (210)
T ss_dssp HTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTE------------EEEEEECSSCS
T ss_pred hhhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcccccc------------ccccccccccc
Confidence 355788999999999999999999999999999999999988764210000000000 0000000 12
Q ss_pred cccHHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHH
Q 003189 735 PMDKHTLVKHLRTTL---GEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 735 P~~K~~~V~~l~~~~---g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i 803 (840)
+..|...++.+.+.. .+.+.++|||.||.||++.|++|||| ++.+..|+.||+|+-.+|+..|+++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~--na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 140 ENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF--CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp TTHHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE--SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred cccccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE--CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 234555555544332 25688999999999999999999999 57888899999999888898887654
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.79 E-value=1.2e-08 Score=99.43 Aligned_cols=130 Identities=18% Similarity=0.133 Sum_probs=94.7
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
+..++....++.++ .+.++..+|+.............++.......+.... ...........+..+.
T Consensus 69 ~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~------------~~~~~~~~~~~~~~~~ 135 (206)
T d1rkua_ 69 KPLEGAVEFVDWLR-ERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDD------------SDRVVGYQLRQKDPKR 135 (206)
T ss_dssp CCCTTHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECT------------TSCEEEEECCSSSHHH
T ss_pred cccchHHHHHHHhh-cCceEEEeccCchHHHHHHHHHhCCchhhcceeeeec------------ccccccccccchhhHH
Confidence 45667777777664 7899999999999999999999998642110000000 0111133444566667
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 003189 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (840)
Q Consensus 740 ~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~ 805 (840)
..++.++.. .+.|+++|||.||.|||+.||+||||+ +..++.++++|++.. .|+..+++.+..
T Consensus 136 ~~~~~~~i~-~~eviaiGDg~NDi~Ml~~Ag~gIAmn-a~~~v~~~~~~~~~~-~~~~d~~~~~~~ 198 (206)
T d1rkua_ 136 QSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAV-HTYEDLKREFLK 198 (206)
T ss_dssp HHHHHHHHT-TCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEE-CSHHHHHHHHHH
T ss_pred HHHHHhccc-ccceEEecCCccCHHHHHhCCccEEEC-CCHHHHHhCCCceee-cCHHHHHHHHHH
Confidence 777777766 789999999999999999999999996 778888888899875 468888876644
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.70 E-value=2.3e-08 Score=100.90 Aligned_cols=141 Identities=15% Similarity=0.144 Sum_probs=95.8
Q ss_pred chHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCc-cccChhhhc---------------CC-----------
Q 003189 664 GVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI-AIEGPEFRE---------------KS----------- 716 (840)
Q Consensus 664 ~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~-~~~g~~~~~---------------~~----------- 716 (840)
+..+++.++++.|+.+.++||.+...+..+.+++++..+... .-+|..+.. ..
T Consensus 22 ~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (244)
T d1s2oa1 22 EHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGF 101 (244)
T ss_dssp HHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcchHHHHHHHHHHhHHHHHHHHhhc
Confidence 445667777889999999999999999999999998654211 111111100 00
Q ss_pred -------------------------H---HHH----hhhcCCce--------EEEecCcccHHHHHHHHHHhCC---CEE
Q 003189 717 -------------------------D---EEL----SKLIPKIQ--------VMARSSPMDKHTLVKHLRTTLG---EVV 753 (840)
Q Consensus 717 -------------------------~---~~~----~~~~~~~~--------v~ar~~P~~K~~~V~~l~~~~g---~~v 753 (840)
+ +++ .+...... +---....+|...++.+.+.+| +.|
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~gi~~~~~ 181 (244)
T d1s2oa1 102 EALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQT 181 (244)
T ss_dssp TTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGGE
T ss_pred ccccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHhccCChhhE
Confidence 0 011 11111111 1111234789999999998866 458
Q ss_pred EEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcC-------EEeccCCchHHHHHHHH
Q 003189 754 AVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD-------VIILDDNFSTIVTVAKW 805 (840)
Q Consensus 754 ~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aD-------ivlldd~f~~i~~~i~~ 805 (840)
.++|||.||.|||+.|+.|++|| ++.+..|+.|| ++--.++...|.+++++
T Consensus 182 v~~GD~~ND~~Ml~~~~~~vav~-na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~ 239 (244)
T d1s2oa1 182 LVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp EEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred EEEcCCCCCHHHHhhCCcEEEeC-CCCHHHHHHhhcccccceEEcCCCCccHHHHHHHH
Confidence 88999999999999999999999 88998899888 45445556677776653
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.68 E-value=7.2e-09 Score=104.24 Aligned_cols=44 Identities=9% Similarity=0.045 Sum_probs=39.4
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT 701 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~ 701 (840)
.+...+.++++|++|+++|+.++++||++...+..+.+++|+..
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~ 58 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence 34456778999999999999999999999999999999999864
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.44 E-value=2.7e-07 Score=91.39 Aligned_cols=43 Identities=9% Similarity=0.050 Sum_probs=39.2
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT 701 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~ 701 (840)
..+.+.+++++++|+++|+.++++||++...+..+.+++|+..
T Consensus 20 ~~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~ 62 (232)
T d1xvia_ 20 SYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG 62 (232)
T ss_dssp CCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccCC
Confidence 3467889999999999999999999999999999999999853
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.07 E-value=5.3e-07 Score=89.56 Aligned_cols=55 Identities=15% Similarity=0.288 Sum_probs=48.7
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcC----CccCHHHhhhCC-ccEEecCCCcHHHHhhcCEEe
Q 003189 736 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHEAD-IGLAMGIAGTEVAKESADVII 791 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~~GD----G~ND~~al~~Ad-vgiamg~~g~~~ak~~aDivl 791 (840)
.+|...++.|.+...+.|.++|| |.||.+||+.|+ .|+||+ ++.|..|..+||++
T Consensus 184 vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~-na~~~~k~~~~~~~ 243 (244)
T d2fuea1 184 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFF 243 (244)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcC-CHHHHHHHHHHhcC
Confidence 78999999997764578999999 569999999997 699999 99999999999876
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.91 E-value=3.8e-06 Score=82.60 Aligned_cols=61 Identities=18% Similarity=0.371 Sum_probs=44.9
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHH
Q 003189 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i 803 (840)
.+|...++.|.++ ..++++||+.||.+||+.|+.|++|+ .|.. +.+|++.+.+ ...+..++
T Consensus 158 ~~Kg~al~~l~~~--~~~i~~GDs~ND~~Mf~~~~~~~av~-~g~~--~~~A~~~~~~--~~ev~~~l 218 (229)
T d1u02a_ 158 VNKGSAIRSVRGE--RPAIIAGDDATDEAAFEANDDALTIK-VGEG--ETHAKFHVAD--YIEMRKIL 218 (229)
T ss_dssp CCHHHHHHHHHTT--SCEEEEESSHHHHHHHHTTTTSEEEE-ESSS--CCCCSEEESS--HHHHHHHH
T ss_pred CCHHHHHHHHhcc--ccceeecCCCChHHHHhccCCeEEEE-eCCC--CccCeEEcCC--HHHHHHHH
Confidence 6899999999876 45678899999999999997776664 3322 4678998854 44444443
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.85 E-value=1.1e-05 Score=79.50 Aligned_cols=123 Identities=18% Similarity=0.216 Sum_probs=84.1
Q ss_pred CCCcchHHHHHHHHhCC-CEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 660 PMRPGVKESVAICRSAG-ITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aG-i~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
++-||+.+.+++|++.| +++.++|+.....+..+.+..|+...-+.++.+.+.. .+..+
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~--------------------~~k~~ 150 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDAL--------------------DRNEL 150 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCS--------------------SGGGH
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccccccccccc--------------------cccch
Confidence 34689999999999987 8999999999999999999999975433333322211 11111
Q ss_pred -HHHHHHHHHhC-----CCEEEEEcCCccCHHHhhhCCc---cEEecCCCcH-HHHhhcCEEeccCCchHHHHHHH
Q 003189 739 -HTLVKHLRTTL-----GEVVAVTGDGTNDAPALHEADI---GLAMGIAGTE-VAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 739 -~~~V~~l~~~~-----g~~v~~~GDG~ND~~al~~Adv---giamg~~g~~-~ak~~aDivlldd~f~~i~~~i~ 804 (840)
...++.++... .+.+.|+||+.+|..|-+.|++ +|+.|....+ ..+..+|+++ ++|+.+.+++.
T Consensus 151 p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi--~~~~el~~~l~ 224 (228)
T d2hcfa1 151 PHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF--KNFAETDEVLA 224 (228)
T ss_dssp HHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE--SCSCCHHHHHH
T ss_pred hHHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEE--CCHHHHHHHHH
Confidence 11222222221 2579999999999999999995 4555633333 2444689998 56998888764
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.63 E-value=2.7e-05 Score=76.05 Aligned_cols=125 Identities=22% Similarity=0.306 Sum_probs=84.0
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
.+.|++.+.++.|++.|+++.++|+.....+..+.+++||......++...+... ....|+--.
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~----------------~kp~p~~~~ 158 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPE----------------IKPHPAPFY 158 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSS----------------CTTSSHHHH
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhcccccccccccc----------------ccccchhhH
Confidence 4579999999999999999999999999999999999999753222222221110 001122222
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc-cEEe--cCC-CcHHHHhhcCEEeccCCchHHHHHH
Q 003189 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAM--GIA-GTEVAKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 740 ~~V~~l~~~~g~~v~~~GDG~ND~~al~~Adv-giam--g~~-g~~~ak~~aDivlldd~f~~i~~~i 803 (840)
.+.+.++-. .+.++|+||..+|..+-+.|++ .|.+ |.. ..+.....+|+++- ++..+++++
T Consensus 159 ~~~~~~~~~-~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~--~l~dL~~ii 223 (224)
T d2hsza1 159 YLCGKFGLY-PKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADILKIT 223 (224)
T ss_dssp HHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGGGGT
T ss_pred HHHHHhhhh-hhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEEC--CHHHHHHhh
Confidence 333333322 4679999999999999999987 3333 311 22345566999984 588776654
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.58 E-value=8.5e-05 Score=74.37 Aligned_cols=126 Identities=19% Similarity=0.213 Sum_probs=84.9
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC-CccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
++.||+.+.++.|++.|+++.++|+.+...+..+.+..|+.... +.++.+++... ..-.|..=
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~~----------------~KP~p~~~ 162 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPA----------------GRPYPWMC 162 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSC----------------CTTSSHHH
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccccccccccccccc----------------cccChHHH
Confidence 57899999999999999999999999999999999999986432 33344333210 01122222
Q ss_pred HHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc-EEecCCCc------H---------------------HHHhhcCEE
Q 003189 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAGT------E---------------------VAKESADVI 790 (840)
Q Consensus 739 ~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advg-iamg~~g~------~---------------------~ak~~aDiv 790 (840)
...++.+.-...+.++|+||..+|..+-+.|++- |.+. .|. + ..+..||+|
T Consensus 163 ~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~v 241 (257)
T d1swva_ 163 YKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVI-LGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFT 241 (257)
T ss_dssp HHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEEC-TTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEc-cCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCCEE
Confidence 3333433321135699999999999999999963 3332 221 0 111238999
Q ss_pred eccCCchHHHHHHH
Q 003189 791 ILDDNFSTIVTVAK 804 (840)
Q Consensus 791 lldd~f~~i~~~i~ 804 (840)
+ |++..+..+|+
T Consensus 242 i--~~l~eL~~ii~ 253 (257)
T d1swva_ 242 I--ETMQELESVME 253 (257)
T ss_dssp E--SSGGGHHHHHH
T ss_pred E--CCHHHHHHHHH
Confidence 9 45888888775
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.57 E-value=0.00011 Score=74.88 Aligned_cols=138 Identities=14% Similarity=0.170 Sum_probs=84.9
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCcccc-ChhhhcCCHHHHhhhcCCceEEEecCccc
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIE-GPEFREKSDEELSKLIPKIQVMARSSPMD 737 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (840)
-++|||+++.++.|++.|+.+.++||--...+.++++++|+..++..++. .-+|. ++.+.--++.- -.....
T Consensus 134 i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~---~~~~~~~~~~~----~i~~~~ 206 (291)
T d2bdua1 134 VMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFD---ENGVLKGFKGE----LIHVFN 206 (291)
T ss_dssp CCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEEC---TTSBEEEECSS----CCCTTC
T ss_pred CCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEe---CCeeEeeccCC----cccccc
Confidence 35899999999999999999999999999999999999999754321111 00000 00000000000 012234
Q ss_pred HHHHHH----HHHHh-CCCEEEEEcCCccCHHHhhh---CCccEEecC-C-Cc----HHHHhhcCEEeccCCchHHHHHH
Q 003189 738 KHTLVK----HLRTT-LGEVVAVTGDGTNDAPALHE---ADIGLAMGI-A-GT----EVAKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 738 K~~~V~----~l~~~-~g~~v~~~GDG~ND~~al~~---Advgiamg~-~-g~----~~ak~~aDivlldd~f~~i~~~i 803 (840)
|...+. .++.. ....|.++|||.||.+|.+. ++..++.|- + -. +.-+++=|||+.+|.--.++..+
T Consensus 207 K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~v~~~i 286 (291)
T d2bdua1 207 KHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSI 286 (291)
T ss_dssp HHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCHHHHHH
T ss_pred CcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCChhHHHHH
Confidence 443332 12221 13578899999999999874 344454442 1 11 12347789999998777766554
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.47 E-value=8.3e-05 Score=72.31 Aligned_cols=119 Identities=17% Similarity=0.226 Sum_probs=79.3
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcc--c
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM--D 737 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~--~ 737 (840)
++.|++.++++.|+++|+++.++|+.....+..+.+.+|+...-..++.+++.. +..|. -
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~------------------~~Kp~~~~ 149 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLP------------------YSKPHPQV 149 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSS------------------CCTTSTHH
T ss_pred cccchHHHHHHHhhhccccccccccccccccccccccccccccccccccccccc------------------cchhhHHH
Confidence 456999999999999999999999999999999999999965333333333211 11221 1
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE-Ee--cCCCcHHHHhhcCEEeccCCchHH
Q 003189 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL-AM--GIAGTEVAKESADVIILDDNFSTI 799 (840)
Q Consensus 738 K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgi-am--g~~g~~~ak~~aDivlldd~f~~i 799 (840)
=..+++.+.-. .+.++|+||+.+|..|-+.|++.. .+ +....+.....||+++.+ |..+
T Consensus 150 ~~~~~~~l~~~-~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~--l~el 211 (218)
T d1te2a_ 150 YLDCAAKLGVD-PLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSS--LTEL 211 (218)
T ss_dssp HHHHHHHHTSC-GGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSC--GGGC
T ss_pred HHHHHHHcCCC-chhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECC--hhhC
Confidence 22233333222 367999999999999999999743 22 111122223468988743 6644
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.28 E-value=0.00026 Score=68.11 Aligned_cols=118 Identities=15% Similarity=0.137 Sum_probs=83.7
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.+++.+.++.++..+ ++.++|+.....+..+.+.+|+...-..+ +.+...+..|-
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd~v----------------------~~~~~~~~~~p 140 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFDGI----------------------YGSSPEAPHKA 140 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCSEE----------------------EEECSSCCSHH
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhccccccccc----------------------ccccccccccc
Confidence 46799999999999775 89999999999999999999987532222 22233344555
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCc---cEEecCCCcH-HHHhhcCEEeccCCchHHHHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI---GLAMGIAGTE-VAKESADVIILDDNFSTIVTV 802 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Adv---giamg~~g~~-~ak~~aDivlldd~f~~i~~~ 802 (840)
..++...+++| +.+.|+||+.||..|-+.|++ +|.-|....+ .....+|+++- ++..+...
T Consensus 141 ~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~--~l~el~~~ 208 (210)
T d2ah5a1 141 DVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAH--KPLEVLAY 208 (210)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEES--STTHHHHH
T ss_pred cccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEEC--CHHHHHHH
Confidence 55555555544 578999999999999999997 4433432333 33345899974 48777654
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.97 E-value=0.00014 Score=71.29 Aligned_cols=51 Identities=20% Similarity=0.361 Sum_probs=37.6
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcC----CccCHHHhhhCC-ccEEecCCCcHHHHhhcC
Q 003189 736 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHEAD-IGLAMGIAGTEVAKESAD 788 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~~GD----G~ND~~al~~Ad-vgiamg~~g~~~ak~~aD 788 (840)
.+|...++.|.....+.|+++|| |.||.+||+.|+ .|++++ +..|+ |+.++
T Consensus 184 vsKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~-~~~~~-~~~~~ 239 (243)
T d2amya1 184 WDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APEDT-RRICE 239 (243)
T ss_dssp CSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHHH-HHHHH
T ss_pred cCHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeC-CHHHH-HHHHH
Confidence 68988888886543578999999 789999999997 688886 65444 54443
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=96.97 E-value=0.0014 Score=58.69 Aligned_cols=107 Identities=20% Similarity=0.325 Sum_probs=68.8
Q ss_pred cCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCceee
Q 003189 524 LGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVP 603 (840)
Q Consensus 524 ~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~ 603 (840)
+.||+.+||+++|++.+..... .....-....||....+..++.+ ++ ..+..|++..+...... .|. .
T Consensus 29 SeHPlakAIv~~Ak~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~---~g--~~v~~G~~~~~~~~~~~----~g~--~ 96 (136)
T d2a29a1 29 DETPEGRSIVILAKQRFNLRER-DVQSLHATFVPFTAQSRMSGINI---DN--RMIRKGSVDAIRRHVEA----NGG--H 96 (136)
T ss_dssp CCSHHHHHHHHHHHHHHCCCCC-CTTTTTCEEEEEETTTTEEEEEE---TT--EEEEEECHHHHHHHHHH----HTC--C
T ss_pred CCchHHHHHHHHHHHhcCCCcc-ccccccccccccccccceEEEEE---CC--EEEEecHHHHHHHHHHH----cCC--C
Confidence 7799999999999876432111 11222334566766665554432 22 23456998776543321 111 1
Q ss_pred CCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCC
Q 003189 604 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMR 662 (840)
Q Consensus 604 l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR 662 (840)
++ ..+.+.++.+..+|..++.+| .|..++|++++.|+++
T Consensus 97 ~~----~~~~~~~~~~~~~G~Tvv~Va----------------~d~~~~G~i~l~D~iK 135 (136)
T d2a29a1 97 FP----TDVDQKVDQVARQGATPLVVV----------------EGSRVLGVIALKDIVK 135 (136)
T ss_dssp CC----HHHHHHHHHHHHTTSEEEEEE----------------ETTEEEEEEEEEESSC
T ss_pred Cc----HHHHHHHHHHHHCCCeEEEEE----------------ECCEEEEEEEEEeecC
Confidence 22 346677888999999999887 4678999999999986
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.90 E-value=0.0012 Score=64.38 Aligned_cols=122 Identities=16% Similarity=0.180 Sum_probs=81.5
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.||+.++++.|+ +|+++.++|+........+.+.+|+...-..++...+.. ...|.- .
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~------------------~~KP~~-~ 159 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAG------------------FFKPHP-R 159 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHT------------------BCTTSH-H
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccccccccccccccc------------------ccchhh-H
Confidence 56899999999997 589999999999999999999999864322222221111 011211 2
Q ss_pred HHHHHHHHhCC---CEEEEEcCC-ccCHHHhhhCCccEE-ec-CCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDG-TNDAPALHEADIGLA-MG-IAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG-~ND~~al~~Advgia-mg-~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
-+-..+++. | ..++|+||. .+|..+-+.|++-.. +. ..........+|+++.+ +..++++++
T Consensus 160 ~~~~~~~~l-~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~--l~el~~~l~ 227 (230)
T d1x42a1 160 IFELALKKA-GVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSD--LREVIKIVD 227 (230)
T ss_dssp HHHHHHHHH-TCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESS--TTHHHHHHH
T ss_pred HHHHHHhhh-cccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECC--HHHHHHHHH
Confidence 223333333 4 569999997 589999999998532 21 02223345678998854 999988876
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.89 E-value=0.0015 Score=61.47 Aligned_cols=117 Identities=16% Similarity=0.172 Sum_probs=72.9
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHHH---------------HHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcC
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNINT---------------AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP 725 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~t---------------a~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~ 725 (840)
+-|++.++++.|+++|+++.++|...... ........|+..
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------ 83 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDL------------------------ 83 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCC------------------------
T ss_pred ECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccc------------------------
Confidence 44899999999999999999999976311 111112222211
Q ss_pred CceEEEecCcccH---------------HHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc--EEe--cCCCcHHH
Q 003189 726 KIQVMARSSPMDK---------------HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG--LAM--GIAGTEVA 783 (840)
Q Consensus 726 ~~~v~ar~~P~~K---------------~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg--iam--g~~g~~~a 783 (840)
.-..+|...|+.+ ..+.+.+++. | +.+.||||..+|..|-+.|+++ +.. |..-.+..
T Consensus 84 ~~~~~cp~~p~~~~~~~~~~~~~rKP~p~m~~~~~~~~-~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~ 162 (182)
T d2gmwa1 84 DGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYL-HIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEA 162 (182)
T ss_dssp SEEEEECCBTTCSSGGGBSCCSSSTTSCHHHHHHHHHH-TBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHH
T ss_pred cceeecccccccccccccccccccCCccccccchhhhc-ccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCccc
Confidence 1112232222211 1233333333 3 5689999999999999999985 333 32224556
Q ss_pred HhhcCEEeccCCchHHHHHHH
Q 003189 784 KESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 784 k~~aDivlldd~f~~i~~~i~ 804 (840)
...||+|+ +++..++++|+
T Consensus 163 ~~~ad~v~--~~l~dl~~~ik 181 (182)
T d2gmwa1 163 ENAADWVL--NSLADLPQAIK 181 (182)
T ss_dssp HHHCSEEE--SCGGGHHHHHH
T ss_pred ccCCCEEE--CCHHHHHHHhc
Confidence 67799998 45999988875
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.78 E-value=0.00019 Score=69.18 Aligned_cols=118 Identities=13% Similarity=0.214 Sum_probs=78.9
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++ ++++.++|+.....+..+.+++|+......++.+.+.. ...| +.
T Consensus 82 ~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~------------------~~KP--~p 140 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTP------------------KRKP--DP 140 (207)
T ss_dssp EECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSS------------------CCTT--SS
T ss_pred ccccchhhhhhhhcc-cccccccccccccccccccccccccccccccccccccc------------------cchh--hh
Confidence 356899999999975 79999999999999999999999865322222222211 1112 12
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEe---cCCCcHHHHhhcCEEeccCCchHHHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAM---GIAGTEVAKESADVIILDDNFSTIVT 801 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiam---g~~g~~~ak~~aDivlldd~f~~i~~ 801 (840)
.+++...+++| +.+.|+||+.+|..+-+.|++.... | .......+.+|.++ +++..|.+
T Consensus 141 ~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~i--~~l~dll~ 205 (207)
T d2hdoa1 141 LPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWG-MDPNADHQKVAHRF--QKPLDILE 205 (207)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGG-CCTTGGGSCCSEEE--SSGGGGGG
T ss_pred hhhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecC-CCChhHhhhcCcEe--CCHHHHHh
Confidence 23333222224 6789999999999999999987554 4 33333456788887 45766654
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.57 E-value=0.0023 Score=60.15 Aligned_cols=106 Identities=16% Similarity=0.075 Sum_probs=70.9
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH-
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK- 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K- 738 (840)
++.||+++.++.|++.|+++.++|+-+.... .+.+.+|+...-..++.+.+. +..|
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd~i~~~~~~----------------------~~~KP 135 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFTEVVTSSSG----------------------FKRKP 135 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEEEEECGGGC----------------------CCCTT
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccccccccccccc----------------------cccCC
Confidence 4679999999999999999999999766544 567888886432222222221 1122
Q ss_pred -HHHHHHHHHhCC-CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCE
Q 003189 739 -HTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV 789 (840)
Q Consensus 739 -~~~V~~l~~~~g-~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDi 789 (840)
..+.+...+++| +.+.|+||..+|..+-++|++-... .++.+..++.-||
T Consensus 136 ~p~~~~~~~~~~~~~~~l~vgDs~~Di~aA~~aG~~~i~-v~~~~~~~~~~d~ 187 (187)
T d2fi1a1 136 NPESMLYLREKYQISSGLVIGDRPIDIEAGQAAGLDTHL-FTSIVNLRQVLDI 187 (187)
T ss_dssp SCHHHHHHHHHTTCSSEEEEESSHHHHHHHHHTTCEEEE-CSCHHHHHHHHTC
T ss_pred CHHHHHHHHHHcCCCCeEEEeCCHHHHHHHHHcCCEEEE-ECCCCChHhhcCC
Confidence 122223222323 5689999999999999999987543 3666667776664
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.52 E-value=0.0029 Score=58.26 Aligned_cols=88 Identities=16% Similarity=0.133 Sum_probs=62.0
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCC-HHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDN-INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~-~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
++.|++.++++.|++.|+++.++|+-+ ...+..+-+..++..... .+.....| |
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~-----------------------~~~~~~kp--~ 100 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFI-----------------------QREIYPGS--K 100 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCS-----------------------EEEESSSC--H
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccce-----------------------eeecccCC--C
Confidence 478999999999999999999999654 556677777777653210 12333333 3
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc
Q 003189 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (840)
Q Consensus 739 ~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg 772 (840)
-..+..+.+.+| +.+.|+||..+|..+-+.|++-
T Consensus 101 ~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~ 137 (164)
T d1u7pa_ 101 VTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVT 137 (164)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCE
T ss_pred hHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCE
Confidence 333333333324 6899999999999999999884
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.47 E-value=0.00076 Score=64.48 Aligned_cols=116 Identities=17% Similarity=0.157 Sum_probs=73.8
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.++++.|++.|+++.++|+... .+..+.+..|+...-..++...+.. ...| |.
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~~i~~s~~~~------------------~~Kp--~~ 140 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQSGF------------------VRKP--SP 140 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEEEEECGGGCC------------------CCTT--SS
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhccccccccccccccccc------------------ccch--hH
Confidence 4579999999999999999999998654 5567788899875322222211110 1122 22
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc-EEecCCCcHHHHhhcCEEeccCCchHHHHHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG-LAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg-iamg~~g~~~ak~~aDivlldd~f~~i~~~i 803 (840)
.+.+...+.+| +.++||||+.+|..+-+.|++. |.+. .+. ..+|..+ +++..|.+++
T Consensus 141 ~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~-~~~----~~~~~~~--~~~~dl~~l~ 201 (204)
T d2go7a1 141 EAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFL-EST----YEGNHRI--QALADISRIF 201 (204)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESS-CCS----CTTEEEC--SSTTHHHHHT
T ss_pred HHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEc-CCC----CCcCeec--CCHHHHHHHh
Confidence 33333222224 6899999999999999999985 3444 332 2355555 3466665543
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=96.47 E-value=0.0016 Score=63.58 Aligned_cols=116 Identities=18% Similarity=0.118 Sum_probs=77.1
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccC-hhhhcCCHHHHhhhcCCceEEEecCcc
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEG-PEFREKSDEELSKLIPKIQVMARSSPM 736 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~v~ar~~P~ 736 (840)
.-.+.|++.+.+++|++.|+++.++|+............+|+..-....... ++. .+..|.
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~~------------------~~~KP~ 186 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTK------------------IGHKVE 186 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGG------------------GCCTTC
T ss_pred ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeeccc------------------cccCCC
Confidence 3456899999999999999999999999999999999999975421111100 000 011222
Q ss_pred cHHHHHHHHHHh--CCCEEEEEcCCccCHHHhhhCCccEEe----cCCCcHHHHhhcCEEec
Q 003189 737 DKHTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIGLAM----GIAGTEVAKESADVIIL 792 (840)
Q Consensus 737 ~K~~~V~~l~~~--~g~~v~~~GDG~ND~~al~~Advgiam----g~~g~~~ak~~aDivll 792 (840)
- ..+-..+++. ..+.++|+||..+|+.+-++|++-... |..........++.+|.
T Consensus 187 p-~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~ 247 (253)
T d1zs9a1 187 S-ESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 247 (253)
T ss_dssp H-HHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred c-HHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEEC
Confidence 1 1222233332 036899999999999999999986544 43444444566777774
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=95.79 E-value=0.014 Score=52.23 Aligned_cols=99 Identities=14% Similarity=0.126 Sum_probs=60.5
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhh--hcCCceEEEe---
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSK--LIPKIQVMAR--- 732 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~v~ar--- 732 (840)
+|++.|++.+.++.|+++|++++++||.+......+.+.++.. ...... ..+....+.+
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~----------------~~~~~~~~~~~~~~~~~~~~~ 97 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMT----------------RKWVEDIAGVPLVMQCQREQG 97 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHH----------------HHHHHHTTCCCCSEEEECCTT
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHH----------------hhhhhhcCCCcEEEeeccccc
Confidence 6889999999999999999999999998732111111111000 000000 0111112222
Q ss_pred ---cCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc
Q 003189 733 ---SSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (840)
Q Consensus 733 ---~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advg 772 (840)
..+.-|..+.+.+.....++++|+||...|+.|.+++++=
T Consensus 98 ~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 98 DTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp CCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred ccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCc
Confidence 1124466666666554246788999999999999999874
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.52 E-value=0.011 Score=57.65 Aligned_cols=121 Identities=14% Similarity=0.159 Sum_probs=80.0
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH-
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK- 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K- 738 (840)
++.|++.++++.|++ |+++.++|+.+........+.+|+...-..++.+.+ .+..|
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~----------------------~~~~KP 165 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGE----------------------QKEEKP 165 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGG----------------------SSSCTT
T ss_pred ccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccccccccccccc----------------------cccchh
Confidence 467999999999984 899999999999999999999998653222222221 12222
Q ss_pred -HHHHHHHHHhCC---CEEEEEcCCc-cCHHHhhhCCccEEecCCC----cHHHHhhcCEEeccCCchHHHHHHHH
Q 003189 739 -HTLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIGLAMGIAG----TEVAKESADVIILDDNFSTIVTVAKW 805 (840)
Q Consensus 739 -~~~V~~l~~~~g---~~v~~~GDG~-ND~~al~~Advgiamg~~g----~~~ak~~aDivlldd~f~~i~~~i~~ 805 (840)
..+.+.+.+++| +.+.|+||.. +|..+-+.|++.-....+. .+.....+|+++- ++..+..+++.
T Consensus 166 ~p~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~--~l~eL~~ll~~ 239 (247)
T d2gfha1 166 APSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELPALLQS 239 (247)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHHHHHHH
T ss_pred hhhhHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEEC--CHHHHHHHHHH
Confidence 223333222224 5689999995 8999999999963321111 1112344788885 48888887753
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.00 E-value=0.024 Score=53.86 Aligned_cols=139 Identities=20% Similarity=0.305 Sum_probs=95.2
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhc--------------------CCHHHH
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFRE--------------------KSDEEL 720 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~--------------------~~~~~~ 720 (840)
+-||+.++++.+++. ....++|--..+-..++|+.+|+..+ .-.+.-+++. .+.+++
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e--~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel 158 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGE--LHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEEL 158 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSE--EEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCce--eecccccccccCCChHHHHHHHHHhhhccCccHHHH
Confidence 458999999999877 78899999999999999999999621 1111111111 111222
Q ss_pred -------------hhhcCCceEEEecCcccHHHHHHHHHHhCC-CEEEEEcCCccCHHHhhhCCc--cEEecCCCcHHHH
Q 003189 721 -------------SKLIPKIQVMARSSPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADI--GLAMGIAGTEVAK 784 (840)
Q Consensus 721 -------------~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g-~~v~~~GDG~ND~~al~~Adv--giamg~~g~~~ak 784 (840)
..++.+++..+ -..|..+++..-...| ...+++||++.|..||+.|.= |+|+.-+|.+-+-
T Consensus 159 ~e~~d~~f~~~e~~~i~e~Vk~VG---gg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal 235 (308)
T d1y8aa1 159 FRKLDELFSRSEVRKIVESVKAVG---AGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYAL 235 (308)
T ss_dssp HHHHHHHHHSHHHHHHHHTCBCCC---HHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHH
T ss_pred HHHHHHHhccchHhhHHhhhcccC---CchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCccccc
Confidence 22233343332 2567777665433323 345789999999999998843 6666668999999
Q ss_pred hhcCEEeccCCchHHHHHHHH
Q 003189 785 ESADVIILDDNFSTIVTVAKW 805 (840)
Q Consensus 785 ~~aDivlldd~f~~i~~~i~~ 805 (840)
..||+.+...+..++..++..
T Consensus 236 ~eA~VaiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 236 KHADVVIISPTAMSEAKVIEL 256 (308)
T ss_dssp TTCSEEEECSSTHHHHHHHHH
T ss_pred cccceEEeccchhHHHHHHHH
Confidence 999999999888887777654
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=94.87 E-value=0.0095 Score=56.49 Aligned_cols=88 Identities=18% Similarity=0.244 Sum_probs=63.0
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCC----HHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEec--C
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDN----INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS--S 734 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~----~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~--~ 734 (840)
+-|++.+.++.+++.|++|+.+||+. ..|++.+-+.+|+...+.. . ..+.+. .
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~--------------------~-vll~~~~~~ 145 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMN--------------------P-VIFAGDKPG 145 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBC--------------------C-CEECCCCTT
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCccccc--------------------c-eEeeCCCCC
Confidence 45799999999999999999999975 4577777777898643210 0 022222 2
Q ss_pred cccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc-cEE
Q 003189 735 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLA 774 (840)
Q Consensus 735 P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Adv-gia 774 (840)
...|...|+ +. ++++++||..+|..+..+|++ +|-
T Consensus 146 K~~rr~~Ik---~y--~I~l~~GD~l~Df~aA~eagi~~iR 181 (209)
T d2b82a1 146 QNTKSQWLQ---DK--NIRIFYGDSDNDITAARDVGARGIR 181 (209)
T ss_dssp CCCSHHHHH---HT--TEEEEEESSHHHHHHHHHTTCEEEE
T ss_pred chHHHHHHH---Hc--CeEEEecCCHHHHhHHHHcCCCceE
Confidence 244555554 23 689999999999999999986 443
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=94.76 E-value=0.017 Score=55.05 Aligned_cols=122 Identities=10% Similarity=0.076 Sum_probs=81.8
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
.++.+++.++++.+++.|+++.++|.-.......+.+..|+....+.++...+... ..|. .
T Consensus 92 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~~------------------~KP~-p 152 (220)
T d1zrna_ 92 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQV------------------YKPD-N 152 (220)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTC------------------CTTS-H
T ss_pred ccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeeeeeec------------------cccH-H
Confidence 34678999999999999999999999999999999998888754333333322211 1121 1
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecC---CCcHHHHhhcCEEeccCCchHHHHH
Q 003189 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGI---AGTEVAKESADVIILDDNFSTIVTV 802 (840)
Q Consensus 739 ~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~---~g~~~ak~~aDivlldd~f~~i~~~ 802 (840)
..+-..+++. | +.++|+||..+|+.+-++|++-.+.-. ...+-....+|+++. +|..+.++
T Consensus 153 ~~~~~~~~~~-g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~--~l~el~~l 219 (220)
T d1zrna_ 153 RVYELAEQAL-GLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVEL 219 (220)
T ss_dssp HHHHHHHHHH-TSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHTT
T ss_pred HHHHHHHHHh-CCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEEC--CHHHHHhh
Confidence 1222223332 4 679999999999999999998754321 122223345899884 48777653
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=93.69 E-value=0.038 Score=52.60 Aligned_cols=110 Identities=13% Similarity=0.157 Sum_probs=72.4
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCccc
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (840)
..++-|++.+.++.|++.|+++.++|+... +..+.+..|+......++.+.+.. ...|.-
T Consensus 89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~~i~~~~~~~------------------~~KP~~ 148 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFDAIADPAEVA------------------ASKPAP 148 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCSEECCTTTSS------------------SCTTST
T ss_pred cccccCCceeccccccccccceEEEeecch--hhHHHHhhcccccccccccccccc------------------ccccCh
Confidence 345678999999999999999999999754 567788889876433333333321 112322
Q ss_pred HHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCc-cEEecCCCcHHHHhhcCEEec
Q 003189 738 KHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI-GLAMGIAGTEVAKESADVIIL 792 (840)
Q Consensus 738 K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Adv-giamg~~g~~~ak~~aDivll 792 (840)
.-+-+.+++. | +.+.|+||..+|..+-+.|++ .|.++ . ......++.++.
T Consensus 149 -~~~~~~l~~~-~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~-~--~~~~~~~~~~~~ 202 (221)
T d1o08a_ 149 -DIFIAAAHAV-GVAPSESIGLEDSQAGIQAIKDSGALPIGVG-R--PEDLGDDIVIVP 202 (221)
T ss_dssp -HHHHHHHHHT-TCCGGGEEEEESSHHHHHHHHHHTCEEEEES-C--HHHHCSSSEEES
T ss_pred -HHHHHHHHHc-CCCCceEEEEecCHHHHHHHHHcCCEEEEEC-C--hhhcccccEEcC
Confidence 1233334333 4 568999999999999999987 44444 2 233345666653
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=93.49 E-value=0.092 Score=51.39 Aligned_cols=43 Identities=14% Similarity=0.111 Sum_probs=32.9
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcC---CCHHHHHHHHHHcCCccC
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTG---DNINTAKAIARECGILTD 702 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TG---D~~~ta~~iA~~~Gi~~~ 702 (840)
++=|++.++++.|+++|++++++|. ..........+++|+...
T Consensus 23 ~~i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~~~g~~~~ 68 (261)
T d1vjra_ 23 SLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVP 68 (261)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCC
T ss_pred ccCchHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhhccccc
Confidence 3338999999999999999999985 445555566677887543
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=93.31 E-value=0.013 Score=57.59 Aligned_cols=36 Identities=17% Similarity=0.235 Sum_probs=29.3
Q ss_pred CcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHc
Q 003189 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC 697 (840)
Q Consensus 662 R~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~ 697 (840)
=|++.++|+.|+++|++++++|+....+...+++++
T Consensus 20 i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 20 IPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 388999999999999999999987766666655543
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=93.20 E-value=0.052 Score=51.66 Aligned_cols=25 Identities=36% Similarity=0.538 Sum_probs=22.9
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcC
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTG 684 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TG 684 (840)
.+-|++.++++.|+++|+++.++|-
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTN 72 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTN 72 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEE
T ss_pred EecccHHHHHHHHHhhCCeEEEecc
Confidence 3579999999999999999999995
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=92.48 E-value=0.08 Score=50.16 Aligned_cols=121 Identities=12% Similarity=0.187 Sum_probs=75.4
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCc-cccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI-AIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
.+.|++.+.++.++. +..++|+-....+..+-+.+|+...... +..+.+.. ..+..|.-
T Consensus 85 ~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~~~~KP~~- 144 (222)
T d2fdra1 85 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLG----------------ADRVKPKP- 144 (222)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHC----------------TTCCTTSS-
T ss_pred chhhhHHHHhhhccc---cceeeeecchhhhhhhhcccccccccceeeccccccc----------------ccccccCH-
Confidence 467888888877764 5578999999999999999999753211 11111100 00122322
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc-EEecCCCc--------HHHHhhcCEEeccCCchHHHHHHH
Q 003189 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG-LAMGIAGT--------EVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 739 ~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg-iamg~~g~--------~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
..+.+.+++. | +.++|+||..+|..+-+.|++- |... .+. +.....+|+++.+ +..+..++.
T Consensus 145 ~~~~~~~~~l-~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~-~~~~~~~~~~~~l~~~~ad~vi~~--l~eL~~ll~ 218 (222)
T d2fdra1 145 DIFLHGAAQF-GVSPDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVISR--MQDLPAVIA 218 (222)
T ss_dssp HHHHHHHHHH-TCCGGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEESC--GGGHHHHHH
T ss_pred HHHHHHHHhh-CCCCceEEEEcCCHHHHHHHHHcCCEEEEEc-cCCCCCcchHHHHHhCCCCEEECC--HHHHHHHHH
Confidence 2233334433 4 6799999999999999999973 3332 221 1233359999954 888776653
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.43 E-value=0.057 Score=51.11 Aligned_cols=106 Identities=11% Similarity=0.138 Sum_probs=64.2
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCC----CHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGD----NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD----~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (840)
.++|++.+.++.|+++|+++.++|+- ............|+...-+.++.+.+... ..-.|
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~----------------~KP~p 160 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGM----------------IKPEP 160 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSC----------------CTTCH
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccC----------------CCCCh
Confidence 46799999999999999999999963 33344445555665432222222222110 00122
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc-cEEecCCCcHHH
Q 003189 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAMGIAGTEVA 783 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Adv-giamg~~g~~~a 783 (840)
+--...++.++-. .+.+.|+||..+|..+-+.|++ +|-+. ++.+..
T Consensus 161 ~~~~~~~~~~~v~-p~~~l~IgD~~~Di~~A~~aG~~ti~V~-~~~~~~ 207 (222)
T d1cr6a1 161 QIYNFLLDTLKAK-PNEVVFLDDFGSNLKPARDMGMVTILVH-NTASAL 207 (222)
T ss_dssp HHHHHHHHHHTSC-TTSEEEEESSSTTTHHHHHHTCEEEECC-SSSHHH
T ss_pred HHHHHHHHHhCCC-cceEEEEECCHHHHHHHHHcCCEEEEEC-CcchHH
Confidence 2233334444323 3678999999999999999997 44443 444443
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=91.98 E-value=0.27 Score=46.83 Aligned_cols=122 Identities=11% Similarity=0.125 Sum_probs=79.7
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
.++.|++.+++++|+ |+.+.++|..+...+..+-+..|+....+.++.+.+... ..|.-
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~~~~~------------------~KP~p- 150 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRV------------------FKPHP- 150 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTC------------------CTTSH-
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccccccccccccccc------------------cCccH-
Confidence 456789999999886 788999999999999999999998764444444433221 12321
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEE-ecCCCcHH-------------------------HHhhcCE
Q 003189 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA-MGIAGTEV-------------------------AKESADV 789 (840)
Q Consensus 739 ~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgia-mg~~g~~~-------------------------ak~~aDi 789 (840)
.-+-..+++. | +.++||||..+|..+-+.|++.-. +.-.+.+. .....|+
T Consensus 151 ~~f~~a~~~l-g~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~ 229 (245)
T d1qq5a_ 151 DSYALVEEVL-GVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDF 229 (245)
T ss_dssp HHHHHHHHHH-CCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSE
T ss_pred HHHHHHHHHh-CCChhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCE
Confidence 1222233332 4 569999999999999999986422 21011110 0124799
Q ss_pred EeccCCchHHHHHHH
Q 003189 790 IILDDNFSTIVTVAK 804 (840)
Q Consensus 790 vlldd~f~~i~~~i~ 804 (840)
++. ++..++.+|+
T Consensus 230 ~i~--~l~el~~lv~ 242 (245)
T d1qq5a_ 230 VVP--ALGDLPRLVR 242 (245)
T ss_dssp EES--SGGGHHHHHH
T ss_pred EEC--CHHHHHHHHH
Confidence 984 5999998875
|
| >d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.42 E-value=0.0027 Score=49.74 Aligned_cols=56 Identities=16% Similarity=0.224 Sum_probs=48.7
Q ss_pred hccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccCh
Q 003189 43 ANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICP 100 (840)
Q Consensus 43 ~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 100 (840)
..|..+.|+.+.+.+++..++||+.+.++.+.|++. ..+..++.+.++++||++..
T Consensus 15 ~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~--~~~~~~i~~~i~~~Gy~a~l 70 (72)
T d2aw0a_ 15 NSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPL--LTSPETLRGAIEDMGFDATL 70 (72)
T ss_dssp HHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTT--TCCHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCC--CCCHHHHHHHHHhhCCCcEe
Confidence 457788899999999999999999999999999766 56678889999999998754
|
| >d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Enterococcus hirae [TaxId: 1354]
Probab=91.14 E-value=0.0043 Score=47.96 Aligned_cols=55 Identities=18% Similarity=0.205 Sum_probs=48.0
Q ss_pred hccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccC
Q 003189 43 ANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQIC 99 (840)
Q Consensus 43 ~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 99 (840)
..|..+.|+.+.+.+++..++|++.+.++.+.|++. ..+..++.+.++++||.+.
T Consensus 12 ~~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~--~~~~~~i~~~i~~~Gy~a~ 66 (68)
T d1cpza_ 12 NHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEA--NVQATEICQAINELGYQAE 66 (68)
T ss_dssp SSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTT--TCCHHHHHHHHHTTSSCEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCC--CCCHHHHHHHHHhhCCCcE
Confidence 357778899999999999999999999999999765 5667889999999999764
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=90.03 E-value=0.071 Score=52.04 Aligned_cols=43 Identities=14% Similarity=0.125 Sum_probs=31.8
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCC---CHHHHHHHHHHcCCcc
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGD---NINTAKAIARECGILT 701 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD---~~~ta~~iA~~~Gi~~ 701 (840)
+.+=|++.++|+.|+++|++++++|+. ........-+++|+..
T Consensus 18 ~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~ 63 (250)
T d2c4na1 18 NVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDV 63 (250)
T ss_dssp TEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCC
T ss_pred CCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhccccc
Confidence 333478999999999999999999854 4444444456678754
|
| >d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.81 E-value=0.0059 Score=49.30 Aligned_cols=58 Identities=14% Similarity=0.204 Sum_probs=50.6
Q ss_pred hccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChhh
Q 003189 43 ANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDE 102 (840)
Q Consensus 43 ~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 102 (840)
..|..+.|+.+.+.+++..++||+.+.++.+.|++. ..+...+.+.++++||.+...+
T Consensus 21 ~~C~~~Ie~~l~~~~GV~~v~vn~~~~~v~v~~~~~--~~~~~~i~~~I~~~Gy~a~~~~ 78 (84)
T d1q8la_ 21 HSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPH--LISVEEMKKQIEAMGFPAFVKK 78 (84)
T ss_dssp CSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTT--TCCHHHHHHHHHHTTCCEECSC
T ss_pred HHHHHHHHHHHhcCCCceEEEEECCCCEEceeeccc--ccCHHHHHHHHHHhCCccEEcC
Confidence 368888999999999999999999999999999776 5677788999999999876544
|
| >d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Bacillus subtilis, CopZ [TaxId: 1423]
Probab=89.41 E-value=0.0077 Score=46.57 Aligned_cols=55 Identities=11% Similarity=0.172 Sum_probs=47.9
Q ss_pred hccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccC
Q 003189 43 ANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQIC 99 (840)
Q Consensus 43 ~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 99 (840)
..|..+.|+.+.+.+++..+++++...++.+.|++. ..+..++...+++.||++.
T Consensus 14 ~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~--~~~~~~i~~~i~~~Gy~~~ 68 (69)
T d2qifa1 14 QHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDAD--KVSVKDIADAIEDQGYDVA 68 (69)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTT--TCCHHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCC--CCCHHHHHHHHHHhCCccc
Confidence 357778899999999999999999999999999765 5677788999999999864
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.29 E-value=0.11 Score=48.87 Aligned_cols=97 Identities=12% Similarity=0.124 Sum_probs=57.2
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHH----HHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAK----AIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~----~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (840)
.+.|++.++++.|++.|+++.++|........ ..-...|+....+.++.+.+.. ...|
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~------------------~~KP 160 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVG------------------MVKP 160 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHT------------------CCTT
T ss_pred CCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccc------------------cchh
Confidence 46789999999999999999999975433222 2222233322111122111110 0122
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCc-cEEec
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI-GLAMG 776 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Adv-giamg 776 (840)
. +.-+-+.++.. | +.++||||...|..+-++|++ +|.+.
T Consensus 161 ~-~~~~~~~~~~~-~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~ 203 (225)
T d1zd3a1 161 E-PQIYKFLLDTL-KASPSEVVFLDDIGANLKPARDLGMVTILVQ 203 (225)
T ss_dssp C-HHHHHHHHHHH-TCCGGGEEEEESCHHHHHHHHHTTCEEEECS
T ss_pred H-HHHHHHHhhhc-ccCccceeEEecCHHHHHHHHHcCCEEEEEC
Confidence 2 22223333333 4 668899999999999999998 55554
|
| >d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Mercuric ion binding protein MerP species: Ralstonia metallidurans CH34 [TaxId: 266264]
Probab=89.04 E-value=0.0068 Score=47.33 Aligned_cols=57 Identities=14% Similarity=0.135 Sum_probs=49.2
Q ss_pred hhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccCh
Q 003189 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICP 100 (840)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 100 (840)
+..|..+.|+.+.+.+++..++||+...++.+.|++. ..+..++.+.+++.||.+..
T Consensus 14 C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~--~~~~~~i~~~i~~~Gy~a~v 70 (72)
T d1osda_ 14 CSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDA--KTSVQKLTKATADAGYPSSV 70 (72)
T ss_dssp STTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETT--TCCHHHHHHHHHHTTCCCEE
T ss_pred cHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCC--CCCHHHHHHHHHhcCCCeEe
Confidence 3467788899999999999999999999999999766 56678899999999998764
|
| >d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Potential copper-translocating P-type ATPase CopA (YvgX) species: Bacillus subtilis [TaxId: 1423]
Probab=87.72 E-value=0.0091 Score=46.59 Aligned_cols=53 Identities=11% Similarity=0.193 Sum_probs=46.5
Q ss_pred ccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCccc
Q 003189 44 NLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQI 98 (840)
Q Consensus 44 ~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 98 (840)
.|..+.|+.+.+.+++.+++|++.++++.+.|++. ..+...+...++++||.+
T Consensus 19 ~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~--~~~~~~i~~~i~~~Gy~v 71 (72)
T d1p6ta1 19 ACAARIEKGLKRMPGVTDANVNLATETVNVIYDPA--ETGTAAIQEKIEKLGYHV 71 (72)
T ss_dssp HHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTT--TSCHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCC--CCCHHHHHHHHHHhCCcc
Confidence 67788899999999999999999999999999765 566778888899999975
|
| >d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Metal ion-transporting ATPase ZntA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=87.67 E-value=0.0067 Score=47.52 Aligned_cols=56 Identities=7% Similarity=0.154 Sum_probs=47.9
Q ss_pred ccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChhhh
Q 003189 44 NLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDEL 103 (840)
Q Consensus 44 ~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 103 (840)
.|....|+.+.+.+++..+.||+.+.++.+.+++. ...++...+.++||.+.+.+.
T Consensus 16 ~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~----~~~~i~~~i~~~GY~v~~~~~ 71 (73)
T d1mwza_ 16 ACARKVENAVRQLAGVNQVQVLFATEKLVVDADND----IRAQVESALQKAGYSLRDEQA 71 (73)
T ss_dssp HHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSC----CHHHHHHHHHHHTCCCCBCCS
T ss_pred HHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCC----CHHHHHHHHHHcCCcccCCCC
Confidence 67888999999999999999999999999998443 345788899999999987764
|
| >d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Potential copper-translocating P-type ATPase CopA (YvgX) species: Bacillus subtilis [TaxId: 1423]
Probab=86.93 E-value=0.0074 Score=48.07 Aligned_cols=58 Identities=14% Similarity=0.150 Sum_probs=50.0
Q ss_pred hccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChhh
Q 003189 43 ANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDE 102 (840)
Q Consensus 43 ~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 102 (840)
..|....|+.+...+++.++.|++.+.++.+.|++. ..+...+...++.+||.+....
T Consensus 14 ~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~--~~~~~~i~~~i~~~Gy~~~~~~ 71 (79)
T d1p6ta2 14 AACANRIEKRLNKIEGVANAPVNFALETVTVEYNPK--EASVSDLKEAVDKLGYKLKLKG 71 (79)
T ss_dssp SSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTT--TCCHHHHHHHHHHHTCCEEESC
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEeCCCEEEEEECCC--CCCHHHHHHHHHHHCCceEECC
Confidence 467778899999999999999999999999999766 5677889999999999876543
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=86.86 E-value=0.13 Score=46.50 Aligned_cols=26 Identities=27% Similarity=0.456 Sum_probs=23.4
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCC
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGD 685 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD 685 (840)
.+-|++.++++.|+++|+++.++|.-
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq 55 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQ 55 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred eECccHHHHHHHHHHcCCceeeeccc
Confidence 34689999999999999999999974
|
| >d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper transporter domain ccc2a species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=86.37 E-value=0.011 Score=46.18 Aligned_cols=56 Identities=7% Similarity=0.164 Sum_probs=47.8
Q ss_pred hhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccCh
Q 003189 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICP 100 (840)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 100 (840)
+..|....|+.+.+.+++..++||+...++.+.|++. .+..++...++.+||.+.+
T Consensus 13 C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~---~~~~~i~~~i~~~Gy~a~~ 68 (72)
T d2ggpb1 13 CSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNE---VTADSIKEIIEDCGFDCEI 68 (72)
T ss_dssp SSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSS---CCHHHHHHHHHHTTCCCEE
T ss_pred cHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCC---CCHHHHHHHHHHhCCCeEE
Confidence 3467888899999999999999999999999999643 4567888999999998764
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=85.70 E-value=0.24 Score=48.10 Aligned_cols=35 Identities=14% Similarity=0.178 Sum_probs=27.0
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR 695 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~ 695 (840)
+=|++.++|+.|+++|++++++|+....+...+++
T Consensus 19 ~i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~ 53 (253)
T d1wvia_ 19 RIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQE 53 (253)
T ss_dssp ECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHH
T ss_pred cCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHH
Confidence 34899999999999999999999755444444443
|
| >d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.91 E-value=0.015 Score=46.28 Aligned_cols=57 Identities=14% Similarity=0.173 Sum_probs=49.3
Q ss_pred hccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChh
Q 003189 43 ANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPD 101 (840)
Q Consensus 43 ~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 101 (840)
..|....|+.+.+.+++.+++|++.+.++.+.|++. ..+...+...++++||++.+.
T Consensus 20 ~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~--~~~~~~i~~~i~~~GY~~~~~ 76 (79)
T d1kvja_ 20 NSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPK--LQTPKTLQEAIDDMGFDAVIH 76 (79)
T ss_dssp THHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTT--TCCHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCC--CCCHHHHHHHHHhcCCCcEeC
Confidence 356778899999999999999999999999999765 567788999999999987654
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=84.34 E-value=4.4 Score=33.45 Aligned_cols=85 Identities=18% Similarity=0.209 Sum_probs=52.9
Q ss_pred cCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeCCCcEEE--EEcCchHHHHHhcccccccCCce
Q 003189 524 LGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRV--HCKGASEIILAACDKFLNSNGEV 601 (840)
Q Consensus 524 ~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~--~~KGa~e~il~~c~~~~~~~g~~ 601 (840)
+.||+.+|+++++.+.+.+.... ..| ...++.++.. ++-|.++.+-+..-
T Consensus 26 S~HPlA~AIv~~a~~~~~~~~~~---------~~~----------~~~~G~Gi~g~~v~vG~~~~~~~~~~--------- 77 (113)
T d2b8ea2 26 SEHPIAEAIVKKALEHGIELGEP---------EKV----------EVIAGEGVVADGILVGNKRLMEDFGV--------- 77 (113)
T ss_dssp CCSHHHHHHHHHHHTTTCCCCCC---------SCE----------EEETTTEEEETTEEEECHHHHHHTTC---------
T ss_pred CCCchHHHHHHHHHHhcCCCCcc---------ccc----------eeeccceEEeEEEEECcHHHHHhcCC---------
Confidence 78999999999998776542211 011 1123333332 23388877654321
Q ss_pred eeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecc
Q 003189 602 VPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGI 657 (840)
Q Consensus 602 ~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~ 657 (840)
.+++ .+.+.++.+..+|..++.++ .|..++|++++
T Consensus 78 -~~~~----~~~~~~~~~~~~G~T~v~va----------------~d~~~~G~ial 112 (113)
T d2b8ea2 78 -AVSN----EVELALEKLEREAKTAVIVA----------------RNGRVEGIIAV 112 (113)
T ss_dssp -CCCH----HHHHHHHHHHTTTCEEEEEE----------------ETTEEEEEEEE
T ss_pred -CCCH----HHHHHHHHHHhCCCeEEEEE----------------ECCEEEEEEEE
Confidence 2232 45677888899999888887 35678888875
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=82.85 E-value=0.071 Score=48.77 Aligned_cols=92 Identities=15% Similarity=0.206 Sum_probs=55.8
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHc-CCccCCCccccChhhhcCCHHHHhhhcCCceEEEe-----c
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC-GILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR-----S 733 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~-Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar-----~ 733 (840)
++.+++.+.++.++..|+++.++|+-+...+...-.+. |+. ..+.. +++. .
T Consensus 84 ~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~---------------------~~fd~--v~~s~~~~~~ 140 (197)
T d2b0ca1 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIR---------------------DAADH--IYLSQDLGMR 140 (197)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHH---------------------HHCSE--EEEHHHHTCC
T ss_pred ccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccch---------------------hhccc--eeeccccccc
Confidence 46789999999999999999999975543322211111 111 11111 2221 1
Q ss_pred CcccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCc-cEEec
Q 003189 734 SPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI-GLAMG 776 (840)
Q Consensus 734 ~P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Adv-giamg 776 (840)
.|.- .+.+...+++| +.++|+||..+|..+-+.|++ +|.+.
T Consensus 141 Kp~~--~~~~~~~~~~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v~ 185 (197)
T d2b0ca1 141 KPEA--RIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVK 185 (197)
T ss_dssp TTCH--HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECC
T ss_pred ccch--HHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHcCCEEEEEC
Confidence 2332 23333323224 679999999999999999997 55544
|