Citrus Sinensis ID: 003230

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------
MVYASGIRLPCVPHLYKSSAPSGFNGDRRSTSLSFLLKKDSFSRKIFAGKSSKEFDASPLIITASEKVLVPGSQSDDPSAVTDQLETPETVSEDIEVRNGIESLQMEDNENVEIEDHGPVTLQGKVSSEKSEVKREVGPRSIPPPGAGQNIYEIDPNLLGHRQHLDYRYGRYKQMCEDIDKYEGGLAAFSRGYEKFGFIRSDTGITYREWAPGAKSASLIGDFNNWNPNADIMTQNEFGVWEIFLPNNADGSPPIPHGSRVKIHMDTPSGIKDSIPAWIKFSVQAPGEIPYNGIYYDPPEEEKYVFQHPQPKKPKSLRIYEAHVGMSSTEPIINTYANFRDDVLPRIKRLGYNAVQIMAVQEHSYYASFGYHVTNFFAPSSRCGTPDDLKSLIDKAHELGLLVLMDIVHSHASNNVLDGLNMFDGTDGHYFHSGSRGYHWMWDSRLFNYGSWEVLRFLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLQVAFTGNYSEYFGFATDVDAVVYLMLVNDMIHGLYPEAVSIGEDVSGMPTFCIPVQDGGVGFDYRLQMAIADKWIELLKKRDEDWKMGAIVHTMTNRRWLEKCVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLVTMGLGGEAYLNFMGNEFGHPEWIDFPRGDQRLPNGQFVPGNNFSYDKCRRRFDLGDADYLRYRGMQEFDRAMQHLEEKYGFMTSEHQYVSRKDEGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDDPLFGGYKRLDHNAEYFSLEGWYDDQPHSFLVYAPSRTAVVYALADEEEQPLNV
cEEEcccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccEEEEcccccEEEEEcccccccHHHHccccccccccccccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHcccEEccccEEEEEEcccccEEEEEccccccccccccccccccccEEEEEccccccccccccccEEEEEEEcccccEEccccccEEEEEcccccccccccccccccHHHccccccccccccccEEEEcccccccccccccHHHHHHHHHHHHHHccccEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHcccEEEEEEccccccccHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccccccccccccccccccHHHHHHHcccccccccccEEEEEEEEccccccEEEEcccccHHcccHHHHcccccHHHHHHHcccccccccHHHHHHHHHHHHHHHHcccccccEEEccccccccccccccccccccccccccccccccHHHHHHHcccccccccccHHHHHHHHHHHHHHHHccccccccEEEEcccccccEEEEEEccEEEEEEccccccccccccccccccEEEEEEEcccccccccccccccccEEccccccccccEEEEEEccccEEEEEEEcccccccccc
cEEEEcEEccccccccccccccccccccccccccEEEEccccccEEEEEccccccccccHEEcccccEEEcccccccccccHHHccccccccccccccccEEEEEcccccccEccccccEEcccHccccccccccccccEEcccccccccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccccccEEEEEEcccccEEEEEEccccccccccccccccccEEEEEEccccccccccccccEEEEEEEccccccccccHHHEEEcccccccccccEEcccccHHHHEHcccccccccccEEEEEEEcccccccccccHHHHHHHHHHHHHHccccEEEEEEHHccccccccccccccccccccccccHHHHHHHHHHHHHcccEEEEEEccccccccccccccccccccccEccccccccccccccEEEcccHHHHHHHHHHHHHHHHHHHccccEEEcHHHHHHHHHccccccccccccHHccccccHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccccccccccHHHHHccHHHHHHHHHcccHHcccccEEEEEEcHHccccEEEEEcccccEEEcccEEHEEcccHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccccEEEccccccccccHccccccccHccccccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEcccccEEEEEEEccEEEEEEccccccccccEEEcccccEEEEEEccccHHccccccccccccEccccccccccccEEEEEccccEEEEEEcccccHHHccc
mvyasgirlpcvphlykssapsgfngdrrSTSLSFllkkdsfsrkifagksskefdaspliitasekvlvpgsqsddpsavtdqletpetvsedieVRNGieslqmednenveiedhgpvtlqgkvsseksevkrevgprsipppgagqniyeidpnllghrqhlDYRYGRYKQMCEDIDKYEGGLAAFSRGyekfgfirsdtgityrewapgaksasligdfnnwnpnadimtqnefgvweiflpnnadgsppiphgsrvkihmdtpsgikdsipawikfsvqapgeipyngiyydppeeekyvfqhpqpkkpkslrIYEAHvgmsstepiintyanfrddVLPRIKRLGYNAVQIMAVQEHSYYAsfgyhvtnffapssrcgtpddLKSLIDKAHELGLLVLMDIVHShasnnvldglnmfdgtdghyfhsgsrgyhwmwdsrlfnygSWEVLRFLLSNARWWLEeykfdgfrfdgvtsmmythhglqvaftgnyseyfgfatdVDAVVYLMLVNDMIHglypeavsigedvsgmptfcipvqdggvgfdYRLQMAIADKWIELLKKRDEDWKMGAIVHTMTNRRWLEKCVAYAESHDQALVGDKTIAFWLMDKdmydfmaldrpstpridrGIALHKMIRLVTMGLGGEAYLNFmgnefghpewidfprgdqrlpngqfvpgnnfsydkcrrrfdlgdadylRYRGMQEFDRAMQHLEEKygfmtsehqyvsrkdegdrvivFERGNLVFVFNFhwnssysdyrvgclkpgkykivldsddplfggykrldhnaeyfslegwyddqphsflvyapSRTAVVYALAdeeeqplnv
mvyasgirlpcvphlykssapsgfngDRRSTSLSfllkkdsfsrkifagksskefdaspLIITASEkvlvpgsqsddpsavtdqletpetvsedievRNGIESLQMednenveiedhgpvtlqgkvsseksevkrevgprsipppgagqniYEIDPNLLGHRQHLDYRYGRYKQMCEDIDKYEGGLAAFSRGYEKFGFIRSDTGITYREWAPGAKSASLIGDFNNWNPNADIMTQNEFGVWEIFLPNNADGSPPIPHGSRVKIHMDTPSGIKDSIPAWIKFSVQAPGEIPYNGIYYDPPEEEKYVFQHPQPKKPKSLRIYEAHVGMSSTEPIINTYANFRDDVLPRIKRLGYNAVQIMAVQEHSYYASFGYHVTNFFAPSSRCGTPDDLKSLIDKAHELGLLVLMDIVHSHASNNVLDGLNMFDGTDGHYFHSGSRGYHWMWDSRLFNYGSWEVLRFLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLQVAFTGNYSEYFGFATDVDAVVYLMLVNDMIHGLYPEAVSIGEDVSGMPTFCIPVQDGGVGFDYRLQMAIADKWIELLKKRDEDWKMGAIVHTMTNRRWLEKCVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLVTMGLGGEAYLNFMGNEFGHPEWIDFPRGDQRLPNGQFvpgnnfsydkcrrRFDLGDADYLRYRGMQEFDRAMQHLEEKYGFMTSEHQYVSRKDEGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDDPLFGGYKRLDHNAEYFSLEGWYDDQPHSFLVYAPSRTAVVYALADeeeqplnv
MVYASGIRLPCVPHLYKSSAPSGFNGDRRstslsfllkkdsfsrkIFAGKSSKEFDASPLIITASEKVLVPGSQSDDPSAVTDQLETPETVSEDIEVRNGIESLQMEDNENVEIEDHGPVTLQGKVSSEKSEVKREVGPRSIPPPGAGQNIYEIDPNLLGHRQHLDYRYGRYKQMCEDIDKYEGGLAAFSRGYEKFGFIRSDTGITYREWAPGAKSASLIGDFNNWNPNADIMTQNEFGVWEIFLPNNADGSPPIPHGSRVKIHMDTPSGIKDSIPAWIKFSVQAPGEIPYNGIYYDPPEEEKYVFQHPQPKKPKSLRIYEAHVGMSSTEPIINTYANFRDDVLPRIKRLGYNAVQIMAVQEHSYYASFGYHVTNFFAPSSRCGTPDDLKSLIDKAHELGLLVLMDIVHSHASNNVLDGLNMFDGTDGHYFHSGSRGYHWMWDSRLFNYGSWEVLRFLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLQVAFTGNYSEYFGFATDVDAVVYLMLVNDMIHGLYPEAVSIGEDVSGMPTFCIPVQDGGVGFDYRLQMAIADKWIELLKKRDEDWKMGAIVHTMTNRRWLEKCVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLVTMGLGGEAYLNFMGNEFGHPEWIDFPRGDQRLPNGQFVPGNNFSYDKCRRRFDLGDADYLRYRGMQEFDRAMQHLEEKYGFMTSEHQYVSRKDEGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDDPLFGGYKRLDHNAEYFSLEGWYDDQPHSFLVYAPSRTAVVYALADEEEQPLNV
*****GIRLPCVPHLY********************************************II***************************************************************************************NIYEIDPNLLGHRQHLDYRYGRYKQMCEDIDKYEGGLAAFSRGYEKFGFIRSDTGITYREWAPGAKSASLIGDFNNWNPNADIMTQNEFGVWEIFLPN**********************GIKDSIPAWIKFSVQAPGEIPYNGIYYDP*****YV***********LRIYEAHVGMSSTEPIINTYANFRDDVLPRIKRLGYNAVQIMAVQEHSYYASFGYHVTNFFAPSSRCGTPDDLKSLIDKAHELGLLVLMDIVHSHASNNVLDGLNMFDGTDGHYFHSGSRGYHWMWDSRLFNYGSWEVLRFLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLQVAFTGNYSEYFGFATDVDAVVYLMLVNDMIHGLYPEAVSIGEDVSGMPTFCIPVQDGGVGFDYRLQMAIADKWIELLKKRDEDWKMGAIVHTMTNRRWLEKCVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLVTMGLGGEAYLNFMGNEFGHPEWIDFPRGDQRLPNGQFVPGNNFSYDKCRRRFDLGDADYLRYRGMQEFDRAMQHLEEKYGFMTSEHQYVSRKDEGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDDPLFGGYKRLDHNAEYFSLEGWYDDQPHSFLVYAPSRTAVVYALA*********
**Y*SG*RLP********************************************************************************************SLQMEDN**VEIEDHGPVTLQGKVSSEKS*******PRSIPPPGAGQNIYEIDPNLLGHRQHLDYRYGRYKQMCEDIDKYEGGLAAFSRGYEKFGFIRSDTGITYREWAPGAKSASLIGDFNNWNPNADIMTQNEFGVWEIFLPNNADGSPPIPHGSRVKIHMDTPSGIKDSIPAWIKFSVQAPGEIPYNGIYYDPPEEEKYV********PKSLRIYEAHVGMSSTEPIINTYANFRDDVLPRIKRLGYNAVQIMAVQEHSYYASFGYHVTNFFAPSSRCGTPDDLKSLIDKAHELGLLVLMDIVHSHASNNVLDGLNMFDGTDGHYFHSGSRGYHWMWDSRLFNYGSWEVLRFLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLQVAFTGNYSEYFGFATDVDAVVYLMLVNDMIHGLYPEAVSIGEDVSGMPTFCIPVQDGGVGFDYRLQMAIADKWIELLKKRDEDWKMGAIVHTMTNRRWLEKCVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLVTMGLGGEAYLNFMGNEFGHPEWIDFPRGDQRLPNGQFVPGNNFSYDKCRRRFDLGDADYLRYRGMQEFDRAMQHLEEKYGFMTSEHQYVSRKDEGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDDPLFGGYKRLDHNAEYFSLEGWYDDQPHSFLVYAPSRTAVVYALA*********
MVYASGIRLPCVPHLYKSSAPSGFNGDRRSTSLSFLLKKDSFSRKIFAGKSSKEFDASPLIITASEKVLV*********************SEDIEVRNGIESLQMEDNENVEIEDHGPVTLQG**************PRSIPPPGAGQNIYEIDPNLLGHRQHLDYRYGRYKQMCEDIDKYEGGLAAFSRGYEKFGFIRSDTGITYREWAPGAKSASLIGDFNNWNPNADIMTQNEFGVWEIFLPNNADGSPPIPHGSRVKIHMDTPSGIKDSIPAWIKFSVQAPGEIPYNGIYYDPPEEEKYVFQHPQPKKPKSLRIYEAHVGMSSTEPIINTYANFRDDVLPRIKRLGYNAVQIMAVQEHSYYASFGYHVTNFFAPSSRCGTPDDLKSLIDKAHELGLLVLMDIVHSHASNNVLDGLNMFDGTDGHYFHSGSRGYHWMWDSRLFNYGSWEVLRFLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLQVAFTGNYSEYFGFATDVDAVVYLMLVNDMIHGLYPEAVSIGEDVSGMPTFCIPVQDGGVGFDYRLQMAIADKWIELLKKRDEDWKMGAIVHTMTNRRWLEKCVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLVTMGLGGEAYLNFMGNEFGHPEWIDFPRGDQRLPNGQFVPGNNFSYDKCRRRFDLGDADYLRYRGMQEFDRAMQHLEEKYGFMTSEHQYVSRKDEGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDDPLFGGYKRLDHNAEYFSLEGWYDDQPHSFLVYAPSRTAVVYALAD********
MVYASGIRLPCVPHLY****************LSFLLKKDSFSRKIFAGKSSKEFDASPLIITASEKVLVPGS***************ETV***IEVRNGIESLQMEDNENVEIEDHGPVTLQGKVSSEKSEVKREVGPRSIPPPGAGQNIYEIDPNLLGHRQHLDYRYGRYKQMCEDIDKYEGGLAAFSRGYEKFGFIRSDTGITYREWAPGAKSASLIGDFNNWNPNADIMTQNEFGVWEIFLPNNADGSPPIPHGSRVKIHMDTPSGIKDSIPAWIKFSVQAPGEIPYNGIYYDPPEEEKYVFQHPQPKKPKSLRIYEAHVGMSSTEPIINTYANFRDDVLPRIKRLGYNAVQIMAVQEHSYYASFGYHVTNFFAPSSRCGTPDDLKSLIDKAHELGLLVLMDIVHSHASNNVLDGLNMFDGTDGHYFHSGSRGYHWMWDSRLFNYGSWEVLRFLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLQVAFTGNYSEYFGFATDVDAVVYLMLVNDMIHGLYPEAVSIGEDVSGMPTFCIPVQDGGVGFDYRLQMAIADKWIELLKKRDEDWKMGAIVHTMTNRRWLEKCVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLVTMGLGGEAYLNFMGNEFGHPEWIDFPRGDQRLPNGQFVPGNNFSYDKCRRRFDLGDADYLRYRGMQEFDRAMQHLEEKYGFMTSEHQYVSRKDEGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDDPLFGGYKRLDHNAEYFSLEGWYDDQPHSFLVYAPSRTAVVYALAD********
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVYASGIRLPCVPHLYKSSAPSGFNGDRRSTSLSFLLKKDSFSRKIFAGKSSKEFDASPLIITASEKVLVPGSQSDDPSAVTDQLETPETVSEDIEVRNGIESLQMEDNENVEIEDHGPVTLQGKVSSEKSEVKREVGPRSIPPPGAGQNIYEIDPNLLGHRQHLDYRYGRYKQMCEDIDKYEGGLAAFSRGYEKFGFIRSDTGITYREWAPGAKSASLIGDFNNWNPNADIMTQNEFGVWEIFLPNNADGSPPIPHGSRVKIHMDTPSGIKDSIPAWIKFSVQAPGEIPYNGIYYDPPEEEKYVFQHPQPKKPKSLRIYEAHVGMSSTEPIINTYANFRDDVLPRIKRLGYNAVQIMAVQEHSYYASFGYHVTNFFAPSSRCGTPDDLKSLIDKAHELGLLVLMDIVHSHASNNVLDGLNMFDGTDGHYFHSGSRGYHWMWDSRLFNYGSWEVLRFLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLQVAFTGNYSEYFGFATDVDAVVYLMLVNDMIHGLYPEAVSIGEDVSGMPTFCIPVQDGGVGFDYRLQMAIADKWIELLKKRDEDWKMGAIVHTMTNRRWLEKCVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLVTMGLGGEAYLNFMGNEFGHPEWIDFPRGDQRLPNGQFVPGNNFSYDKCRRRFDLGDADYLRYRGMQEFDRAMQHLEEKYGFMTSEHQYVSRKDEGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDDPLFGGYKRLDHNAEYFSLEGWYDDQPHSFLVYAPSRTAVVYALADEEEQPLNV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query837 2.2.26 [Sep-21-2011]
Q9LZS3805 1,4-alpha-glucan-branchin yes no 0.959 0.997 0.774 0.0
O23647858 1,4-alpha-glucan-branchin no no 0.978 0.954 0.751 0.0
Q08047799 1,4-alpha-glucan-branchin N/A no 0.930 0.974 0.735 0.0
Q01401820 1,4-alpha-glucan-branchin no no 0.804 0.820 0.572 0.0
Q9D6Y9702 1,4-alpha-glucan-branchin yes no 0.795 0.948 0.576 0.0
Q04446702 1,4-alpha-glucan-branchin yes no 0.795 0.948 0.565 0.0
P30924861 1,4-alpha-glucan-branchin N/A no 0.763 0.742 0.595 0.0
Q6EAS5699 1,4-alpha-glucan-branchin yes no 0.795 0.952 0.567 0.0
Q9Y8H3684 1,4-alpha-glucan-branchin yes no 0.804 0.983 0.567 0.0
Q6T308699 1,4-alpha-glucan-branchin N/A no 0.795 0.952 0.558 0.0
>sp|Q9LZS3|GLGB2_ARATH 1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=SBE2.2 PE=1 SV=1 Back     alignment and function desciption
 Score = 1347 bits (3485), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 645/833 (77%), Positives = 710/833 (85%), Gaps = 30/833 (3%)

Query: 1   MVYASGIRLPCVPHLYKSSAP--SGFNGDRRSTSLSFLLKKDSFSRKIFAGKSSKEFDAS 58
           MV   G+ L   P     S P  +GFN    +++LSF  KK   SRKIFAGK S EFD+S
Sbjct: 1   MVVIHGVSL--TPRFTLPSRPLNTGFNAG--NSTLSFFFKKHPLSRKIFAGKQSAEFDSS 56

Query: 59  PLIITASEKVLVPGSQSDDPSAVTDQLETPETVSEDIEVRNGIESLQMEDNENVEIEDHG 118
              I+ASEKVLVP +  DDP   +   +              +ES  ME  E V  ED  
Sbjct: 57  SQAISASEKVLVPDNLDDDPRGFSQIFD--------------LESQTMEYTEAVRTEDQT 102

Query: 119 PVTLQGKVSSEKSEVKREVGPRSIPPPGAGQNIYEIDPNLLGHRQHLDYRYGRYKQMCED 178
              ++          +R V PR +PPPG G+ IYEIDP L  +  HLDYRYG+YK++ E+
Sbjct: 103 MNVVK----------ERGVKPRIVPPPGDGKKIYEIDPMLRTYNNHLDYRYGQYKRLREE 152

Query: 179 IDKYEGGLAAFSRGYEKFGFIRSDTGITYREWAPGAKSASLIGDFNNWNPNADIMTQNEF 238
           IDKYEGGL AFSRGYEK GF RSD GITYREWAPGAK+ASLIGDFNNWN NADIMT+NEF
Sbjct: 153 IDKYEGGLEAFSRGYEKLGFSRSDAGITYREWAPGAKAASLIGDFNNWNSNADIMTRNEF 212

Query: 239 GVWEIFLPNNADGSPPIPHGSRVKIHMDTPSGIKDSIPAWIKFSVQAPGEIPYNGIYYDP 298
           GVWEIFLPNN DGSP IPHGSRVKI MDTPSGIKDSIPAWIKFSVQAPGEIP+NGIYYDP
Sbjct: 213 GVWEIFLPNNTDGSPAIPHGSRVKIRMDTPSGIKDSIPAWIKFSVQAPGEIPFNGIYYDP 272

Query: 299 PEEEKYVFQHPQPKKPKSLRIYEAHVGMSSTEPIINTYANFRDDVLPRIKRLGYNAVQIM 358
           PEEEKYVF+HPQPK+PKSLRIYEAHVGMSSTEP++NTYANFRDDVLPRIK+LGYNAVQIM
Sbjct: 273 PEEEKYVFKHPQPKRPKSLRIYEAHVGMSSTEPMVNTYANFRDDVLPRIKKLGYNAVQIM 332

Query: 359 AVQEHSYYASFGYHVTNFFAPSSRCGTPDDLKSLIDKAHELGLLVLMDIVHSHASNNVLD 418
           A+QEHSYYASFGYHVTNFFAPSSRCGTP++LKSLID+AHELGL+VLMDIVHSHAS N LD
Sbjct: 333 AIQEHSYYASFGYHVTNFFAPSSRCGTPEELKSLIDRAHELGLVVLMDIVHSHASKNTLD 392

Query: 419 GLNMFDGTDGHYFHSGSRGYHWMWDSRLFNYGSWEVLRFLLSNARWWLEEYKFDGFRFDG 478
           GLNMFDGTD HYFHSG RGYHWMWDSRLFNYGSWEVLR+LLSNARWWLEEYKFDGFRFDG
Sbjct: 393 GLNMFDGTDAHYFHSGPRGYHWMWDSRLFNYGSWEVLRYLLSNARWWLEEYKFDGFRFDG 452

Query: 479 VTSMMYTHHGLQVAFTGNYSEYFGFATDVDAVVYLMLVNDMIHGLYPEAVSIGEDVSGMP 538
           VTSMMYTHHGL V FTGNY+EYFG  TDVDAV YLMLVNDMIHGLYPEA+++GEDVSGMP
Sbjct: 453 VTSMMYTHHGLSVGFTGNYTEYFGLETDVDAVNYLMLVNDMIHGLYPEAITVGEDVSGMP 512

Query: 539 TFCIPVQDGGVGFDYRLQMAIADKWIELLKKRDEDWKMGAIVHTMTNRRWLEKCVAYAES 598
           TFCIPVQDGGVGFDYRL MAIADKWIE+LKKRDEDW+MG I++T+TNRRW EKC++YAES
Sbjct: 513 TFCIPVQDGGVGFDYRLHMAIADKWIEMLKKRDEDWQMGDIIYTLTNRRWSEKCISYAES 572

Query: 599 HDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLVTMGLGGEAYLNFM 658
           HDQALVGDKTIAFWLMDKDMYDFMA+DRPSTP IDRGIALHKMIRL+TMGLGGE YLNFM
Sbjct: 573 HDQALVGDKTIAFWLMDKDMYDFMAVDRPSTPLIDRGIALHKMIRLITMGLGGEGYLNFM 632

Query: 659 GNEFGHPEWIDFPRGDQRLPNGQFVPGNNFSYDKCRRRFDLGDADYLRYRGMQEFDRAMQ 718
           GNEFGHPEWIDFPRG+QRL +G  +PGNNFSYDKCRRRFDLGDADYLRYRG+QEFD+AMQ
Sbjct: 633 GNEFGHPEWIDFPRGEQRLSDGSVIPGNNFSYDKCRRRFDLGDADYLRYRGLQEFDQAMQ 692

Query: 719 HLEEKYGFMTSEHQYVSRKDEGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKI 778
           HLEE YGFMTSEHQ++SRKDE DRVIVFERG+LVFVFNFHW SSY DYR+GC KPGKYKI
Sbjct: 693 HLEENYGFMTSEHQFISRKDEADRVIVFERGDLVFVFNFHWTSSYFDYRIGCSKPGKYKI 752

Query: 779 VLDSDDPLFGGYKRLDHNAEYFSLEGWYDDQPHSFLVYAPSRTAVVYALADEE 831
           VLDSDDPLFGG+ RLD  AEYF+ +G YD++P SF+VYAP RTAVVYALA+ +
Sbjct: 753 VLDSDDPLFGGFNRLDRKAEYFTYDGLYDERPCSFMVYAPCRTAVVYALANHD 805
Catalyzes the formation of the alpha-1,6-glucosidic linkages in starch by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 8
>sp|O23647|GLGB1_ARATH 1,4-alpha-glucan-branching enzyme 2-1, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=SBE2.1 PE=1 SV=1 Back     alignment and function description
>sp|Q08047|GLGB_MAIZE 1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic OS=Zea mays GN=SBE1 PE=1 SV=1 Back     alignment and function description
>sp|Q01401|GLGB_ORYSJ 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SBE1 PE=1 SV=2 Back     alignment and function description
>sp|Q9D6Y9|GLGB_MOUSE 1,4-alpha-glucan-branching enzyme OS=Mus musculus GN=Gbe1 PE=2 SV=1 Back     alignment and function description
>sp|Q04446|GLGB_HUMAN 1,4-alpha-glucan-branching enzyme OS=Homo sapiens GN=GBE1 PE=1 SV=3 Back     alignment and function description
>sp|P30924|GLGB_SOLTU 1,4-alpha-glucan-branching enzyme OS=Solanum tuberosum GN=SBE1 PE=2 SV=2 Back     alignment and function description
>sp|Q6EAS5|GLGB_HORSE 1,4-alpha-glucan-branching enzyme OS=Equus caballus GN=GBE1 PE=2 SV=1 Back     alignment and function description
>sp|Q9Y8H3|GLGB_EMENI 1,4-alpha-glucan-branching enzyme OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=be1 PE=2 SV=3 Back     alignment and function description
>sp|Q6T308|GLGB_FELCA 1,4-alpha-glucan-branching enzyme OS=Felis catus GN=GBE1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query837
50400194856 starch branching enzyme II [Vigna radiat 0.986 0.964 0.794 0.0
449440211876 PREDICTED: 1,4-alpha-glucan-branching en 0.996 0.952 0.8 0.0
124303224833 starch branching enzyme II [Populus tric 0.968 0.973 0.790 0.0
356572528868 PREDICTED: 1,4-alpha-glucan-branching en 0.988 0.952 0.779 0.0
255587042863 starch branching enzyme II, putative [Ri 0.990 0.960 0.797 0.0
129770485845 starch branching enzyme II-1 [Malus x do 0.977 0.968 0.792 0.0
42794062870 starch branching enzyme [Phaseolus vulga 0.984 0.947 0.779 0.0
297740079859 unnamed protein product [Vitis vinifera] 0.990 0.965 0.791 0.0
356505340870 PREDICTED: 1,4-alpha-glucan-branching en 0.988 0.950 0.772 0.0
1345570922 starch branching enzyme I [Pisum sativum 0.990 0.899 0.764 0.0
>gi|50400194|gb|AAT76444.1| starch branching enzyme II [Vigna radiata] Back     alignment and taxonomy information
 Score = 1396 bits (3614), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 670/843 (79%), Positives = 745/843 (88%), Gaps = 17/843 (2%)

Query: 1   MVYA-SGIRLPCVPHLYKSSAPSGFNGDRRSTSLSFLLKKDSFSRKIFAGKSSKEFDASP 59
           MVY  SGIR P VP L  SS      GDRR+ SL   L+K+ FSRKI A KSS + D+  
Sbjct: 1   MVYTISGIRFPVVPSLNVSS----LRGDRRAASLPVFLRKNDFSRKILAVKSSHDSDSPS 56

Query: 60  LIITASEKVLVPGSQSDDPSAVTDQLETPETVSEDIEVRNGIESLQMEDNENVEIE--DH 117
             I  S+KVL+P  Q D+ +++TDQLETP   SED    + +E L MED +   I   D 
Sbjct: 57  SAIAESDKVLIPQDQ-DNSASLTDQLETPVITSEDA---HNLEDLTMEDEDKYSISEADT 112

Query: 118 GPVTLQGKVSSEKSEVKR------EVGPRSIPPPGAGQNIYEIDPNLLGHRQHLDYRYGR 171
               ++G++ S  S  K+      E  P++IP PGAGQ IYEIDP+LL HR+HLD+R+G+
Sbjct: 113 SYRQIEGELGSVVSVGKKVNIPSDEAKPKTIPRPGAGQKIYEIDPSLLAHREHLDFRFGQ 172

Query: 172 YKQMCEDIDKYEGGLAAFSRGYEKFGFIRSDTGITYREWAPGAKSASLIGDFNNWNPNAD 231
           YK++ ++I+KYEGGL  FSRGYEKFGFIRS TG+TYREWAPGAKSA+LIGDFNNWN NAD
Sbjct: 173 YKRLHDEINKYEGGLDTFSRGYEKFGFIRSATGVTYREWAPGAKSAALIGDFNNWNSNAD 232

Query: 232 IMTQNEFGVWEIFLPNNADGSPPIPHGSRVKIHMDTPSGIKDSIPAWIKFSVQAPGEIPY 291
           +MT+NEFGVWEIFLPNN DGSPPIPHGSRVKI MDTPSG+KDSIPAWIKFSVQAPGEIPY
Sbjct: 233 VMTRNEFGVWEIFLPNNVDGSPPIPHGSRVKIRMDTPSGVKDSIPAWIKFSVQAPGEIPY 292

Query: 292 NGIYYDPPEEEKYVFQHPQPKKPKSLRIYEAHVGMSSTEPIINTYANFRDDVLPRIKRLG 351
           +GIYYDPPEEEKYVF+HPQPK+PKSLRIYE+HVGMSS EP+INTYANFRDDVLPRIK+LG
Sbjct: 293 SGIYYDPPEEEKYVFKHPQPKRPKSLRIYESHVGMSSPEPMINTYANFRDDVLPRIKKLG 352

Query: 352 YNAVQIMAVQEHSYYASFGYHVTNFFAPSSRCGTPDDLKSLIDKAHELGLLVLMDIVHSH 411
           YNAVQIMA+QEHSYYASFGYHVTNFFAPSSR GTP++LKSLIDKAHELGLLVLMDIVHSH
Sbjct: 353 YNAVQIMAIQEHSYYASFGYHVTNFFAPSSRFGTPEELKSLIDKAHELGLLVLMDIVHSH 412

Query: 412 ASNNVLDGLNMFDGTDGHYFHSGSRGYHWMWDSRLFNYGSWEVLRFLLSNARWWLEEYKF 471
           ASNN LDGLNMFDGTD HYFH GSRGYHWMWDSRLFNYGSWEVLR+LLSNARWWL+EYKF
Sbjct: 413 ASNNTLDGLNMFDGTDSHYFHPGSRGYHWMWDSRLFNYGSWEVLRYLLSNARWWLDEYKF 472

Query: 472 DGFRFDGVTSMMYTHHGLQVAFTGNYSEYFGFATDVDAVVYLMLVNDMIHGLYPEAVSIG 531
           DGFRFDGVTSMMYTHHGLQVAFTGNYSEYFG ATDVDAVVYLML ND+IHGL+PEAV+IG
Sbjct: 473 DGFRFDGVTSMMYTHHGLQVAFTGNYSEYFGMATDVDAVVYLMLANDLIHGLFPEAVTIG 532

Query: 532 EDVSGMPTFCIPVQDGGVGFDYRLQMAIADKWIELLKKRDEDWKMGAIVHTMTNRRWLEK 591
           EDVSGMPTFC+P QDGGVGFDYRLQMAIADKWIE+LKK+DEDWKMG IVHT+TNRRWLEK
Sbjct: 533 EDVSGMPTFCLPTQDGGVGFDYRLQMAIADKWIEILKKQDEDWKMGDIVHTLTNRRWLEK 592

Query: 592 CVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLVTMGLGG 651
           CVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRL+TMGLGG
Sbjct: 593 CVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLITMGLGG 652

Query: 652 EAYLNFMGNEFGHPEWIDFPRGDQRLPNGQFVPGNNFSYDKCRRRFDLGDADYLRYRGMQ 711
           E YLNFMGNEFGHPEWIDFPRG+Q+LPNG  +PGNN+SYDKCRRRFDLGDADYLRYRGMQ
Sbjct: 653 EGYLNFMGNEFGHPEWIDFPRGEQQLPNGSVIPGNNYSYDKCRRRFDLGDADYLRYRGMQ 712

Query: 712 EFDRAMQHLEEKYGFMTSEHQYVSRKDEGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCL 771
           EFDRAMQ LEEK+GFMT+EHQY+SRK+EGD+VI+FERGNLVFVFNFHW++SYSDYRVGC 
Sbjct: 713 EFDRAMQLLEEKFGFMTAEHQYISRKNEGDKVIIFERGNLVFVFNFHWHNSYSDYRVGCS 772

Query: 772 KPGKYKIVLDSDDPLFGGYKRLDHNAEYFSLEGWYDDQPHSFLVYAPSRTAVVYALADEE 831
            PGKYKIVLDSDD LFGG+ RL+H+AEYF+ EGWYDD+P SFLVYAPSRTA VYALAD++
Sbjct: 773 TPGKYKIVLDSDDALFGGFNRLNHSAEYFTNEGWYDDRPRSFLVYAPSRTAAVYALADDD 832

Query: 832 EQP 834
            +P
Sbjct: 833 LEP 835

Source: Vigna radiata

Species: Vigna radiata

Genus: Vigna

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449440211|ref|XP_004137878.1| PREDICTED: 1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|124303224|gb|ABN05322.1| starch branching enzyme II [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356572528|ref|XP_003554420.1| PREDICTED: 1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|255587042|ref|XP_002534111.1| starch branching enzyme II, putative [Ricinus communis] gi|223525834|gb|EEF28271.1| starch branching enzyme II, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|129770485|gb|ABO31358.1| starch branching enzyme II-1 [Malus x domestica] Back     alignment and taxonomy information
>gi|42794062|dbj|BAA82348.2| starch branching enzyme [Phaseolus vulgaris] Back     alignment and taxonomy information
>gi|297740079|emb|CBI30261.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356505340|ref|XP_003521449.1| PREDICTED: 1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|1345570|emb|CAA56319.1| starch branching enzyme I [Pisum sativum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query837
TAIR|locus:2044903858 SBE2.1 "starch branching enzym 0.991 0.967 0.737 0.0
TAIR|locus:2144608805 SBE2.2 "starch branching enzym 0.923 0.960 0.787 0.0
UNIPROTKB|Q01401820 SBE1 "1,4-alpha-glucan-branchi 0.802 0.819 0.577 1.6e-221
MGI|MGI:1921435702 Gbe1 "glucan (1,4-alpha-), bra 0.795 0.948 0.576 4.5e-217
UNIPROTKB|Q04446702 GBE1 "1,4-alpha-glucan-branchi 0.795 0.948 0.565 2.5e-216
UNIPROTKB|F1PX32699 GBE1 "Uncharacterized protein" 0.795 0.952 0.565 7.6e-215
UNIPROTKB|E9PGM4661 GBE1 "1,4-alpha-glucan-branchi 0.775 0.981 0.572 1.6e-214
ASPGD|ASPL0000046871684 AN2314 [Emericella nidulans (t 0.804 0.983 0.567 2.4e-211
UNIPROTKB|F1MZP0655 GBE1 "Uncharacterized protein" 0.775 0.990 0.566 1.2e-207
DICTYBASE|DDB_G0274105678 glgB "branching enzyme" [Dicty 0.794 0.980 0.543 6.2e-204
TAIR|locus:2044903 SBE2.1 "starch branching enzyme 2.1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3398 (1201.2 bits), Expect = 0., P = 0.
 Identities = 622/843 (73%), Positives = 712/843 (84%)

Query:     1 MVYA-SGIRLPCVPHLYK-SSAPSGFNGDRRXXXXXXXXXXXXXXXX--IFAGKSSKEFD 56
             MVY  SG+R P +P + K +S+   FN D R                  +FA K S + D
Sbjct:     1 MVYTISGVRFPHLPSIKKKNSSLHSFNEDLRRSNAVSFSLRKDSRSSGKVFARKPSYDSD 60

Query:    57 ASPLIITASEKVLVPGSQSDDPSAVTDQLETPETVSEDIEVRNGIESLQMEDNENVEIED 116
             +S L  TASEK+   G QSD  S+ +DQ+++ +TVS+D +V   ++  + E+ +  E  D
Sbjct:    61 SSSLATTASEKLR--GHQSDSSSSASDQVQSRDTVSDDTQVLGNVDVQKTEEAQETETLD 118

Query:   117 H-GPVTLQGKVSSEKS------EVKREVGPRSIPPPGAGQNIYEIDPNLLGHRQHLDYRY 169
                 ++  G +S ++        V +EVG R IPPPG G+ IY+IDP L  HR HLDYRY
Sbjct:   119 QTSALSTSGSISYKEDFAKMSHSVDQEVGQRKIPPPGDGKRIYDIDPMLNSHRNHLDYRY 178

Query:   170 GRYKQMCEDIDKYEGGLAAFSRGYEKFGFIRSDTGITYREWAPGAKSASLIGDFNNWNPN 229
             G+Y+++ E+IDK EGGL AFSRGYE FGF RS TGITYREWAPGAK+ASLIGDFNNWN  
Sbjct:   179 GQYRKLREEIDKNEGGLEAFSRGYEIFGFTRSATGITYREWAPGAKAASLIGDFNNWNAK 238

Query:   230 ADIMTQNEFGVWEIFLPNNADGSPPIPHGSRVKIHMDTPSGIKDSIPAWIKFSVQAPGEI 289
             +D+M +N+FGVWEIFLPNNADGSP IPHGSRVKI MDTPSGIKDSIPAWIK+SVQ PGEI
Sbjct:   239 SDVMARNDFGVWEIFLPNNADGSPAIPHGSRVKIRMDTPSGIKDSIPAWIKYSVQPPGEI 298

Query:   290 PYNGIYYDPPEEEKYVFQHPQPKKPKSLRIYEAHVGMSSTEPIINTYANFRDDVLPRIKR 349
             PYNG+YYDPPEE+KY F+HP+PKKP SLRIYE+HVGMSSTEP INTYANFRDDVLPRIK+
Sbjct:   299 PYNGVYYDPPEEDKYAFKHPRPKKPTSLRIYESHVGMSSTEPKINTYANFRDDVLPRIKK 358

Query:   350 LGYNAVQIMAVQEHSYYASFGYHVTNFFAPSSRCGTPDDLKSLIDKAHELGLLVLMDIVH 409
             LGYNAVQIMA+QEH+YYASFGYHVTNFFAPSSR GTPDDLKSLIDKAHELGL+VLMDIVH
Sbjct:   359 LGYNAVQIMAIQEHAYYASFGYHVTNFFAPSSRFGTPDDLKSLIDKAHELGLVVLMDIVH 418

Query:   410 SHASNNVLDGLNMFDGTDGHYFHSGSRGYHWMWDSRLFNYGSWEVLRFLLSNARWWLEEY 469
             SHAS N LDGL+MFDGTDG YFHSGSRGYHWMWDSRLFNYGSWEVLR+LLSNARWWLEEY
Sbjct:   419 SHASKNTLDGLDMFDGTDGQYFHSGSRGYHWMWDSRLFNYGSWEVLRYLLSNARWWLEEY 478

Query:   470 KFDGFRFDGVTSMMYTHHGLQVAFTGNYSEYFGFATDVDAVVYLMLVNDMIHGLYPEAVS 529
             KFDGFRFDGVTSMMYTHHGLQV FTGNY+EYFG++TDVDAVVYLMLVND+IHGLYPEA+ 
Sbjct:   479 KFDGFRFDGVTSMMYTHHGLQVEFTGNYNEYFGYSTDVDAVVYLMLVNDLIHGLYPEAIV 538

Query:   530 IGEDVSGMPTFCIPVQDGGVGFDYRLQMAIADKWIELLKKRDEDWKMGAIVHTMTNRRWL 589
             +GEDVSGMP FC+PV+DGGVGFDYRL MA+ADKWIELLKKRDEDW++G I  T+TNRRW 
Sbjct:   539 VGEDVSGMPAFCVPVEDGGVGFDYRLHMAVADKWIELLKKRDEDWQVGDITFTLTNRRWG 598

Query:   590 EKCVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLVTMGL 649
             EKCV YAESHDQALVGDKTIAFWLMDKDMYDFMA+DR +TPR+DRGIALHKMIRL+TMGL
Sbjct:   599 EKCVVYAESHDQALVGDKTIAFWLMDKDMYDFMAVDRQATPRVDRGIALHKMIRLITMGL 658

Query:   650 GGEAYLNFMGNEFGHPEWIDFPRGDQRLPNGQFVPGNNFSYDKCRRRFDLGDADYLRYRG 709
             GGE YLNFMGNEFGHPEWIDFPR DQ LP+G+ + GNN SYDKCRRRFDLGDA+YLRY G
Sbjct:   659 GGEGYLNFMGNEFGHPEWIDFPRTDQHLPDGRVIAGNNGSYDKCRRRFDLGDAEYLRYHG 718

Query:   710 MQEFDRAMQHLEEKYGFMTSEHQYVSRKDEGDRVIVFERGNLVFVFNFHWNSSYSDYRVG 769
             +QEFDRAMQ+LEE YGFMTSEHQY+SRKDEGDRVIVFERGNL+FVFNFHW +SYSDYR+G
Sbjct:   719 LQEFDRAMQNLEETYGFMTSEHQYISRKDEGDRVIVFERGNLLFVFNFHWTNSYSDYRIG 778

Query:   770 CLKPGKYKIVLDSDDPLFGGYKRLDHNAEYFSLEGWYDDQPHSFLVYAPSRTAVVYALAD 829
             C  PGKYKIVLDSD+ LFGG+ RLD +AE+F+ +G +DD+P SF+VYAP RTAVVYA  D
Sbjct:   779 CSVPGKYKIVLDSDNSLFGGFNRLDDSAEFFTSDGRHDDRPCSFMVYAPCRTAVVYAAVD 838

Query:   830 EEE 832
             +++
Sbjct:   839 DDD 841
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0043169 "cation binding" evidence=IEA
GO:0003844 "1,4-alpha-glucan branching enzyme activity" evidence=ISS;IDA
GO:0005982 "starch metabolic process" evidence=RCA;IMP
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0000272 "polysaccharide catabolic process" evidence=RCA
GO:0009664 "plant-type cell wall organization" evidence=RCA
GO:0019252 "starch biosynthetic process" evidence=RCA
GO:0010021 "amylopectin biosynthetic process" evidence=TAS
TAIR|locus:2144608 SBE2.2 "starch branching enzyme 2.2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q01401 SBE1 "1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
MGI|MGI:1921435 Gbe1 "glucan (1,4-alpha-), branching enzyme 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q04446 GBE1 "1,4-alpha-glucan-branching enzyme" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1PX32 GBE1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E9PGM4 GBE1 "1,4-alpha-glucan-branching enzyme" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ASPGD|ASPL0000046871 AN2314 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|F1MZP0 GBE1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0274105 glgB "branching enzyme" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q04446GLGB_HUMAN2, ., 4, ., 1, ., 1, 80.56590.79560.9487yesno
Q555Q9GLGB_DICDI2, ., 4, ., 1, ., 1, 80.53800.79680.9837yesno
Q96VA4GLGB_ASPOR2, ., 4, ., 1, ., 1, 80.55690.80640.9796yesno
Q6CCT1GLGB_YARLI2, ., 4, ., 1, ., 1, 80.54600.76100.9218yesno
Q6EAS5GLGB_HORSE2, ., 4, ., 1, ., 1, 80.56740.79560.9527yesno
Q6FJV0GLGB_CANGA2, ., 4, ., 1, ., 1, 80.52180.79560.9433yesno
Q08047GLGB_MAIZE2, ., 4, ., 1, ., 1, 80.73560.93070.9749N/Ano
Q9D6Y9GLGB_MOUSE2, ., 4, ., 1, ., 1, 80.57620.79560.9487yesno
O23647GLGB1_ARATH2, ., 4, ., 1, ., 1, 80.75120.97840.9545nono
P0CN82GLGB_CRYNJ2, ., 4, ., 1, ., 1, 80.56640.79920.9809yesno
Q6CX53GLGB_KLULA2, ., 4, ., 1, ., 1, 80.50270.79800.9290yesno
Q757Q6GLGB_ASHGO2, ., 4, ., 1, ., 1, 80.50420.79800.9502yesno
Q9Y8H3GLGB_EMENI2, ., 4, ., 1, ., 1, 80.56740.80400.9839yesno
P32775GLGB_YEAST2, ., 4, ., 1, ., 1, 80.53140.75500.8977yesno
Q9LZS3GLGB2_ARATH2, ., 4, ., 1, ., 1, 80.77430.95930.9975yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.4.1.180.991
3rd Layer2.4.10.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query837
PLN02447758 PLN02447, PLN02447, 1,4-alpha-glucan-branching enz 0.0
cd11321406 cd11321, AmyAc_bac_euk_BE, Alpha amylase catalytic 0.0
PLN02960897 PLN02960, PLN02960, alpha-amylase 0.0
PLN03244872 PLN03244, PLN03244, alpha-amylase; Provisional 1e-137
COG0296628 COG0296, GlgB, 1,4-alpha-glucan branching enzyme [ 1e-114
PRK12313633 PRK12313, PRK12313, glycogen branching enzyme; Pro 6e-68
TIGR01515618 TIGR01515, branching_enzym, alpha-1,4-glucan:alpha 1e-58
cd11322402 cd11322, AmyAc_Glg_BE, Alpha amylase catalytic dom 4e-55
PRK05402726 PRK05402, PRK05402, glycogen branching enzyme; Pro 5e-54
PRK14706639 PRK14706, PRK14706, glycogen branching enzyme; Pro 2e-45
PRK12568730 PRK12568, PRK12568, glycogen branching enzyme; Pro 3e-44
PRK147051224 PRK14705, PRK14705, glycogen branching enzyme; Pro 3e-44
cd0285495 cd02854, E_set_GBE_euk_N, N-terminal Early set dom 2e-43
cd11325436 cd11325, AmyAc_GTHase, Alpha amylase catalytic dom 1e-31
TIGR02402544 TIGR02402, trehalose_TreZ, malto-oligosyltrehalose 3e-27
cd11350390 cd11350, AmyAc_4, Alpha amylase catalytic domain f 5e-26
COG1523697 COG1523, PulA, Type II secretory pathway, pullulan 2e-19
pfam0280692 pfam02806, Alpha-amylase_C, Alpha amylase, C-termi 2e-19
cd00551260 cd00551, AmyAc_family, Alpha amylase catalytic dom 1e-16
cd11313336 cd11313, AmyAc_arch_bac_AmyA, Alpha amylase cataly 3e-16
pfam0292283 pfam02922, CBM_48, Carbohydrate-binding module 48 4e-16
TIGR02104605 TIGR02104, pulA_typeI, pullulanase, type I 3e-15
cd11326433 cd11326, AmyAc_Glg_debranch, Alpha amylase catalyt 8e-14
TIGR02100688 TIGR02100, glgX_debranch, glycogen debranching enz 1e-13
cd02855105 cd02855, E_set_GBE_prok_N, N-terminal Early set do 3e-13
smart00642166 smart00642, Aamy, Alpha-amylase domain 8e-13
TIGR02102 1111 TIGR02102, pullulan_Gpos, pullulanase, extracellul 8e-12
cd11330472 cd11330, AmyAc_OligoGlu, Alpha amylase catalytic d 3e-11
cd11316403 cd11316, AmyAc_bac2_AmyA, Alpha amylase catalytic 3e-11
pfam00128314 pfam00128, Alpha-amylase, Alpha amylase, catalytic 3e-11
cd11340407 cd11340, AmyAc_bac_CMD_like_3, Alpha amylase catal 2e-10
COG0366505 COG0366, AmyA, Glycosidases [Carbohydrate transpor 2e-10
cd11338389 cd11338, AmyAc_CMD, Alpha amylase catalytic domain 8e-10
PRK03705658 PRK03705, PRK03705, glycogen debranching enzyme; P 1e-09
cd11341406 cd11341, AmyAc_Pullulanase_LD-like, Alpha amylase 4e-09
cd11319375 cd11319, AmyAc_euk_AmyA, Alpha amylase catalytic d 4e-09
cd11339344 cd11339, AmyAc_bac_CMD_like_2, Alpha amylase catal 1e-08
cd11320389 cd11320, AmyAc_AmyMalt_CGTase_like, Alpha amylase 2e-08
cd11314302 cd11314, AmyAc_arch_bac_plant_AmyA, Alpha amylase 4e-08
cd11348429 cd11348, AmyAc_2, Alpha amylase catalytic domain f 6e-08
cd11337328 cd11337, AmyAc_CMD_like, Alpha amylase catalytic d 8e-08
cd11352443 cd11352, AmyAc_5, Alpha amylase catalytic domain f 1e-07
PLN02960 897 PLN02960, PLN02960, alpha-amylase 2e-07
cd11353366 cd11353, AmyAc_euk_bac_CMD_like, Alpha amylase cat 3e-07
cd11346347 cd11346, AmyAc_plant_IsoA, Alpha amylase catalytic 4e-07
PRK05402726 PRK05402, PRK05402, glycogen branching enzyme; Pro 9e-07
cd11328470 cd11328, AmyAc_maltase, Alpha amylase catalytic do 2e-06
cd0268882 cd02688, E_set, Early set domain associated with t 2e-06
cd11332481 cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalyti 2e-06
PLN03244 872 PLN03244, PLN03244, alpha-amylase; Provisional 4e-06
cd11315352 cd11315, AmyAc_bac1_AmyA, Alpha amylase catalytic 2e-05
cd11331450 cd11331, AmyAc_OligoGlu_like, Alpha amylase cataly 2e-05
PRK12313633 PRK12313, PRK12313, glycogen branching enzyme; Pro 3e-05
PRK14510 1221 PRK14510, PRK14510, putative bifunctional 4-alpha- 3e-05
cd11327478 cd11327, AmyAc_Glg_debranch_2, Alpha amylase catal 3e-05
cd11334447 cd11334, AmyAc_TreS, Alpha amylase catalytic domai 3e-05
cd11333428 cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase ca 6e-05
cd0718486 cd07184, E_set_Isoamylase_like_N, N-terminal Early 6e-05
cd11354357 cd11354, AmyAc_bac_CMD_like, Alpha amylase catalyt 8e-05
TIGR02456539 TIGR02456, treS_nterm, trehalose synthase 9e-05
PRK09505683 PRK09505, malS, alpha-amylase; Reviewed 2e-04
PRK09441479 PRK09441, PRK09441, cytoplasmic alpha-amylase; Rev 0.001
TIGR02403543 TIGR02403, trehalose_treC, alpha,alpha-phosphotreh 0.002
PRK10933551 PRK10933, PRK10933, trehalose-6-phosphate hydrolas 0.002
cd0286097 cd02860, E_set_Pullulanase, Early set domain assoc 0.003
>gnl|CDD|215246 PLN02447, PLN02447, 1,4-alpha-glucan-branching enzyme Back     alignment and domain information 
 Score = 1431 bits (3706), Expect = 0.0
 Identities = 546/778 (70%), Positives = 617/778 (79%), Gaps = 43/778 (5%)

Query: 63  TASEKVLVPGSQSDDPSAVTDQLETPETVSEDIEVRNGIESLQMEDNENVEIEDHGPVTL 122
             SE VL P    D   + +  ++ P                + EDN             
Sbjct: 1   ALSEHVLSPDGLPDSAPSPSPAVDEPRPEDPGSPATEAPYPAKTEDN------------- 47

Query: 123 QGKVSSEKSEVKREVGPRSIPPPGAGQNIYEIDPNLLGHRQHLDYRYGRYKQMCEDIDKY 182
                             S PPPG G  IYEIDP L  +  HL YRY RY++  E+I+K 
Sbjct: 48  --------------SAAASPPPPGDGLGIYEIDPMLEPYEDHLRYRYSRYRRRREEIEKN 93

Query: 183 EGGLAAFSRGYEKFGFIRSDTGITYREWAPGAKSASLIGDFNNWNPNADIMTQNEFGVWE 242
           EGGL AFSRGYEKFGF RS+ GITYREWAPGAK+A+LIGDFNNWNPNA  MT+NEFGVWE
Sbjct: 94  EGGLEAFSRGYEKFGFNRSEGGITYREWAPGAKAAALIGDFNNWNPNAHWMTKNEFGVWE 153

Query: 243 IFLPNNADGSPPIPHGSRVKIHMDTPSG-IKDSIPAWIKFSVQAPGEI--PYNGIYYDPP 299
           IFLP+ ADGSP IPHGSRVKI M+TP G   D IPAWIK++VQAPGEI  PYNG+Y+DPP
Sbjct: 154 IFLPD-ADGSPAIPHGSRVKIRMETPDGRWVDRIPAWIKYAVQAPGEIGAPYNGVYWDPP 212

Query: 300 EEEKYVFQHPQPKKPKSLRIYEAHVGMSSTEPIINTYANFRDDVLPRIKRLGYNAVQIMA 359
           EEEKYVF+HP+P +P +LRIYEAHVGMSS EP +N+Y  F DDVLPRIK LGYNAVQ+MA
Sbjct: 213 EEEKYVFKHPRPPRPAALRIYEAHVGMSSEEPKVNSYREFADDVLPRIKALGYNAVQLMA 272

Query: 360 VQEHSYYASFGYHVTNFFAPSSRCGTPDDLKSLIDKAHELGLLVLMDIVHSHASNNVLDG 419
           +QEH+YY SFGYHVTNFFA SSR GTP+DLK LIDKAH LGL VLMD+VHSHAS N LDG
Sbjct: 273 IQEHAYYGSFGYHVTNFFAVSSRSGTPEDLKYLIDKAHSLGLRVLMDVVHSHASKNTLDG 332

Query: 420 LNMFDGTDGHYFHSGSRGYHWMWDSRLFNYGSWEVLRFLLSNARWWLEEYKFDGFRFDGV 479
           LN FDGTDG YFHSG RGYHW+WDSRLFNYG+WEVLRFLLSN RWWLEEYKFDGFRFDGV
Sbjct: 333 LNGFDGTDGSYFHSGPRGYHWLWDSRLFNYGNWEVLRFLLSNLRWWLEEYKFDGFRFDGV 392

Query: 480 TSMMYTHHGLQVAFTGNYSEYFGFATDVDAVVYLMLVNDMIHGLYPEAVSIGEDVSGMPT 539
           TSM+Y HHGLQ+AFTGNY+EYFG ATDVDAVVYLML ND++HGLYPEAV+I EDVSGMPT
Sbjct: 393 TSMLYHHHGLQMAFTGNYNEYFGMATDVDAVVYLMLANDLLHGLYPEAVTIAEDVSGMPT 452

Query: 540 FCIPVQDGGVGFDYRLQMAIADKWIELLK-KRDEDWKMGAIVHTMTNRRWLEKCVAYAES 598
            C PVQ+GGVGFDYRL MAI DKWIELLK KRDEDW MG IVHT+TNRR+ EKCVAYAES
Sbjct: 453 LCRPVQEGGVGFDYRLAMAIPDKWIELLKEKRDEDWSMGDIVHTLTNRRYTEKCVAYAES 512

Query: 599 HDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLVTMGLGGEAYLNFM 658
           HDQALVGDKTIAFWLMDK+MYD M+   P+TP +DRGIALHKMIRL+TM LGGE YLNFM
Sbjct: 513 HDQALVGDKTIAFWLMDKEMYDGMSTLTPATPVVDRGIALHKMIRLITMALGGEGYLNFM 572

Query: 659 GNEFGHPEWIDFPRGDQRLPNGQFVPGNNFSYDKCRRRFDLGDADYLRYRGMQEFDRAMQ 718
           GNEFGHPEWIDFPR            GN +SYDKCRRR+DL DAD+LRY+ +  FDRAM 
Sbjct: 573 GNEFGHPEWIDFPRE-----------GNGWSYDKCRRRWDLADADHLRYKFLNAFDRAMM 621

Query: 719 HLEEKYGFMTSEHQYVSRKDEGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKI 778
           HL+EKYGF+TSEHQYVSRKDEGD+VIVFERG+LVFVFNFH  +SYSDYRVGC KPGKYKI
Sbjct: 622 HLDEKYGFLTSEHQYVSRKDEGDKVIVFERGDLVFVFNFHPTNSYSDYRVGCDKPGKYKI 681

Query: 779 VLDSDDPLFGGYKRLDHNAEYFSLEGWYDDQPHSFLVYAPSRTAVVYALADEEEQPLN 836
           VLDSD   FGG+ R+DH+A++F+ EG +D++PHSF+VYAPSRTAVVYA  DE+++P +
Sbjct: 682 VLDSDAWEFGGFGRVDHDADHFTPEGNFDNRPHSFMVYAPSRTAVVYAPVDEDDEPAD 739

Length = 758
>gnl|CDD|200460 cd11321, AmyAc_bac_euk_BE, Alpha amylase catalytic domain found in bacterial and eukaryotic branching enzymes Back     alignment and domain information
>gnl|CDD|215519 PLN02960, PLN02960, alpha-amylase Back     alignment and domain information
>gnl|CDD|178782 PLN03244, PLN03244, alpha-amylase; Provisional Back     alignment and domain information
>gnl|CDD|223373 COG0296, GlgB, 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|237052 PRK12313, PRK12313, glycogen branching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|188150 TIGR01515, branching_enzym, alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase Back     alignment and domain information
>gnl|CDD|200461 cd11322, AmyAc_Glg_BE, Alpha amylase catalytic domain found in the Glycogen branching enzyme (also called 1,4-alpha-glucan branching enzyme) Back     alignment and domain information
>gnl|CDD|235445 PRK05402, PRK05402, glycogen branching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|237795 PRK14706, PRK14706, glycogen branching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|139075 PRK12568, PRK12568, glycogen branching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|237794 PRK14705, PRK14705, glycogen branching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|199884 cd02854, E_set_GBE_euk_N, N-terminal Early set domain associated with the catalytic domain of eukaryotic glycogen branching enzyme (also called 1,4 alpha glucan branching enzyme) Back     alignment and domain information
>gnl|CDD|200464 cd11325, AmyAc_GTHase, Alpha amylase catalytic domain found in Glycosyltrehalose trehalohydrolase (also called Maltooligosyl trehalose Trehalohydrolase) Back     alignment and domain information
>gnl|CDD|233850 TIGR02402, trehalose_TreZ, malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information
>gnl|CDD|200488 cd11350, AmyAc_4, Alpha amylase catalytic domain found in an uncharacterized protein family Back     alignment and domain information
>gnl|CDD|224440 COG1523, PulA, Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|217237 pfam02806, Alpha-amylase_C, Alpha amylase, C-terminal all-beta domain Back     alignment and domain information
>gnl|CDD|200451 cd00551, AmyAc_family, Alpha amylase catalytic domain family Back     alignment and domain information
>gnl|CDD|200452 cd11313, AmyAc_arch_bac_AmyA, Alpha amylase catalytic domain found in archaeal and bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|217288 pfam02922, CBM_48, Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Back     alignment and domain information
>gnl|CDD|233730 TIGR02104, pulA_typeI, pullulanase, type I Back     alignment and domain information
>gnl|CDD|200465 cd11326, AmyAc_Glg_debranch, Alpha amylase catalytic domain found in glycogen debranching enzymes Back     alignment and domain information
>gnl|CDD|131155 TIGR02100, glgX_debranch, glycogen debranching enzyme GlgX Back     alignment and domain information
>gnl|CDD|199885 cd02855, E_set_GBE_prok_N, N-terminal Early set domain associated with the catalytic domain of prokaryotic glycogen branching enzyme Back     alignment and domain information
>gnl|CDD|214758 smart00642, Aamy, Alpha-amylase domain Back     alignment and domain information
>gnl|CDD|233728 TIGR02102, pullulan_Gpos, pullulanase, extracellular, Gram-positive Back     alignment and domain information
>gnl|CDD|200469 cd11330, AmyAc_OligoGlu, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase) and related proteins Back     alignment and domain information
>gnl|CDD|200455 cd11316, AmyAc_bac2_AmyA, Alpha amylase catalytic domain found in bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|215737 pfam00128, Alpha-amylase, Alpha amylase, catalytic domain Back     alignment and domain information
>gnl|CDD|200479 cd11340, AmyAc_bac_CMD_like_3, Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|223443 COG0366, AmyA, Glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|200477 cd11338, AmyAc_CMD, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|235152 PRK03705, PRK03705, glycogen debranching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|200480 cd11341, AmyAc_Pullulanase_LD-like, Alpha amylase catalytic domain found in Pullulanase (also called dextrinase; alpha-dextrin endo-1,6-alpha glucosidase), limit dextrinase, and related proteins Back     alignment and domain information
>gnl|CDD|200458 cd11319, AmyAc_euk_AmyA, Alpha amylase catalytic domain found in eukaryotic Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|200478 cd11339, AmyAc_bac_CMD_like_2, Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|200459 cd11320, AmyAc_AmyMalt_CGTase_like, Alpha amylase catalytic domain found in maltogenic amylases, cyclodextrin glycosyltransferase, and related proteins Back     alignment and domain information
>gnl|CDD|200453 cd11314, AmyAc_arch_bac_plant_AmyA, Alpha amylase catalytic domain found in archaeal, bacterial, and plant Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|200486 cd11348, AmyAc_2, Alpha amylase catalytic domain found in an uncharacterized protein family Back     alignment and domain information
>gnl|CDD|200476 cd11337, AmyAc_CMD_like, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|200489 cd11352, AmyAc_5, Alpha amylase catalytic domain found in an uncharacterized protein family Back     alignment and domain information
>gnl|CDD|215519 PLN02960, PLN02960, alpha-amylase Back     alignment and domain information
>gnl|CDD|200490 cd11353, AmyAc_euk_bac_CMD_like, Alpha amylase catalytic domain found in eukaryotic and bacterial cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|200484 cd11346, AmyAc_plant_IsoA, Alpha amylase catalytic domain family found in plant isoamylases Back     alignment and domain information
>gnl|CDD|235445 PRK05402, PRK05402, glycogen branching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|200467 cd11328, AmyAc_maltase, Alpha amylase catalytic domain found in maltase (also known as alpha glucosidase) and related proteins Back     alignment and domain information
>gnl|CDD|199878 cd02688, E_set, Early set domain associated with the catalytic domain of sugar utilizing enzymes at either the N or C terminus Back     alignment and domain information
>gnl|CDD|200471 cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), trehalose synthase (also called maltose alpha-D-glucosyltransferase), and related proteins Back     alignment and domain information
>gnl|CDD|178782 PLN03244, PLN03244, alpha-amylase; Provisional Back     alignment and domain information
>gnl|CDD|200454 cd11315, AmyAc_bac1_AmyA, Alpha amylase catalytic domain found in bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) Back     alignment and domain information
>gnl|CDD|200470 cd11331, AmyAc_OligoGlu_like, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase) and related proteins Back     alignment and domain information
>gnl|CDD|237052 PRK12313, PRK12313, glycogen branching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|237739 PRK14510, PRK14510, putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional Back     alignment and domain information
>gnl|CDD|200466 cd11327, AmyAc_Glg_debranch_2, Alpha amylase catalytic domain found in glycogen debranching enzymes Back     alignment and domain information
>gnl|CDD|200473 cd11334, AmyAc_TreS, Alpha amylase catalytic domain found in Trehalose synthetase Back     alignment and domain information
>gnl|CDD|200472 cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase catalytic domain found in Sucrose isomerases, oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), dextran glucosidase (also called glucan 1,6-alpha-glucosidase), and related proteins Back     alignment and domain information
>gnl|CDD|199892 cd07184, E_set_Isoamylase_like_N, N-terminal Early set domain associated with the catalytic domain of isoamylase-like (also called glycogen 6-glucanohydrolase) proteins Back     alignment and domain information
>gnl|CDD|200491 cd11354, AmyAc_bac_CMD_like, Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins Back     alignment and domain information
>gnl|CDD|233874 TIGR02456, treS_nterm, trehalose synthase Back     alignment and domain information
>gnl|CDD|236543 PRK09505, malS, alpha-amylase; Reviewed Back     alignment and domain information
>gnl|CDD|236518 PRK09441, PRK09441, cytoplasmic alpha-amylase; Reviewed Back     alignment and domain information
>gnl|CDD|233851 TIGR02403, trehalose_treC, alpha,alpha-phosphotrehalase Back     alignment and domain information
>gnl|CDD|182849 PRK10933, PRK10933, trehalose-6-phosphate hydrolase; Provisional Back     alignment and domain information
>gnl|CDD|199890 cd02860, E_set_Pullulanase, Early set domain associated with the catalytic domain of pullulanase (also called dextrinase and alpha-dextrin endo-1,6-alpha glucosidase) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 837
PLN02447758 1,4-alpha-glucan-branching enzyme 100.0
PLN03244872 alpha-amylase; Provisional 100.0
KOG0470757 consensus 1,4-alpha-glucan branching enzyme/starch 100.0
PLN02960897 alpha-amylase 100.0
PRK12568730 glycogen branching enzyme; Provisional 100.0
PRK14706639 glycogen branching enzyme; Provisional 100.0
PRK147051224 glycogen branching enzyme; Provisional 100.0
PRK05402726 glycogen branching enzyme; Provisional 100.0
PRK12313633 glycogen branching enzyme; Provisional 100.0
TIGR01515613 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 100.0
COG0296628 GlgB 1,4-alpha-glucan branching enzyme [Carbohydra 100.0
TIGR02104605 pulA_typeI pullulanase, type I. Pullulan is an unu 100.0
TIGR02402542 trehalose_TreZ malto-oligosyltrehalose trehalohydr 100.0
TIGR02100688 glgX_debranch glycogen debranching enzyme GlgX. Th 100.0
TIGR021021111 pullulan_Gpos pullulanase, extracellular, Gram-pos 100.0
PRK03705658 glycogen debranching enzyme; Provisional 100.0
TIGR02103898 pullul_strch alpha-1,6-glucosidases, pullulanase-t 100.0
PLN02877970 alpha-amylase/limit dextrinase 100.0
PRK14510 1221 putative bifunctional 4-alpha-glucanotransferase/g 100.0
PRK10785598 maltodextrin glucosidase; Provisional 100.0
TIGR02456539 treS_nterm trehalose synthase. Trehalose synthase 100.0
PRK10933551 trehalose-6-phosphate hydrolase; Provisional 100.0
COG1523697 PulA Type II secretory pathway, pullulanase PulA a 100.0
TIGR02403543 trehalose_treC alpha,alpha-phosphotrehalase. Treha 100.0
PRK09505683 malS alpha-amylase; Reviewed 100.0
PRK09441479 cytoplasmic alpha-amylase; Reviewed 100.0
PF00128316 Alpha-amylase: Alpha amylase, catalytic domain; In 100.0
PLN00196428 alpha-amylase; Provisional 100.0
PLN02361401 alpha-amylase 100.0
PRK13840495 sucrose phosphorylase; Provisional 100.0
TIGR03852470 sucrose_gtfA sucrose phosphorylase. In the forward 100.0
TIGR02455688 TreS_stutzeri trehalose synthase, Pseudomonas stut 100.0
COG0366505 AmyA Glycosidases [Carbohydrate transport and meta 100.0
PLN02784894 alpha-amylase 100.0
KOG0471545 consensus Alpha-amylase [Carbohydrate transport an 100.0
TIGR02401 825 trehalose_TreY malto-oligosyltrehalose synthase. T 100.0
PRK14511 879 maltooligosyl trehalose synthase; Provisional 99.94
KOG2212504 consensus Alpha-amylase [Carbohydrate transport an 99.9
smart00642166 Aamy Alpha-amylase domain. 99.86
cd0285499 Glycogen_branching_enzyme_like_N_term Glycogen bra 99.82
PF14872811 GHL5: Hypothetical glycoside hydrolase 5 99.77
PRK14507 1693 putative bifunctional 4-alpha-glucanotransferase/m 99.65
TIGR01531 1464 glyc_debranch glycogen debranching enzymye. glycog 99.64
COG3280 889 TreY Maltooligosyl trehalose synthase [Carbohydrat 99.53
PF0292285 CBM_48: Carbohydrate-binding module 48 (Isoamylase 99.51
cd02860100 Pullulanase_N_term Pullulanase domain N-terminus. 99.46
cd02855106 Glycogen_branching_enzyme_N_term Glycogen branchin 99.41
cd02856103 Glycogen_debranching_enzyme_N_term Glycogen_debran 99.32
PF0280695 Alpha-amylase_C: Alpha amylase, C-terminal all-bet 99.31
cd0285385 MTHase_N_term Maltooligosyl trehalose synthase (MT 99.24
cd02852119 Isoamylase_N_term Isoamylase N-terminus domain. Is 99.08
PRK05402726 glycogen branching enzyme; Provisional 99.02
cd0285885 Esterase_N_term Esterase N-terminal domain. Estera 98.88
cd0286182 E_set_proteins_like E or "early" set-like proteins 98.8
PF02638311 DUF187: Glycosyl hydrolase like GH101; InterPro: I 98.55
cd0268883 E_set E or "early" set of sugar utilizing enzymes 98.5
PF14701423 hDGE_amylase: glucanotransferase domain of human g 98.46
PF1194189 DUF3459: Domain of unknown function (DUF3459); Int 98.38
KOG3625 1521 consensus Alpha amylase [Carbohydrate transport an 98.32
PF14871132 GHL6: Hypothetical glycosyl hydrolase 6 98.3
PRK14508497 4-alpha-glucanotransferase; Provisional 98.26
PF02446496 Glyco_hydro_77: 4-alpha-glucanotransferase; InterP 97.99
COG1649418 Uncharacterized protein conserved in bacteria [Fun 97.91
PLN02950 909 4-alpha-glucanotransferase 97.91
cd0285979 AMPKbeta_GBD_like AMP-activated protein kinase (AM 97.89
PF02324809 Glyco_hydro_70: Glycosyl hydrolase family 70; Inte 97.87
PLN02635538 disproportionating enzyme 97.8
PRK145101221 putative bifunctional 4-alpha-glucanotransferase/g 97.71
PF02065394 Melibiase: Melibiase; InterPro: IPR000111 O-Glycos 97.48
cd06594317 GH31_glucosidase_YihQ YihQ is a bacterial alpha-gl 97.31
cd06593308 GH31_xylosidase_YicI YicI alpha-xylosidase is a gl 97.3
cd06597340 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide 97.3
cd06592303 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact 97.24
PF02324 809 Glyco_hydro_70: Glycosyl hydrolase family 70; Inte 96.78
TIGR00217513 malQ 4-alpha-glucanotransferase. This enzyme is kn 96.73
cd06600317 GH31_MGAM-like This family includes the following 96.68
PRK11052695 malQ 4-alpha-glucanotransferase; Provisional 96.67
PF00150281 Cellulase: Cellulase (glycosyl hydrolase family 5) 96.56
PF13200316 DUF4015: Putative glycosyl hydrolase domain 96.48
cd06591319 GH31_xylosidase_XylS XylS is a glycosyl hydrolase 96.43
cd06602339 GH31_MGAM_SI_GAA This family includes the followin 96.37
PRK14582671 pgaB outer membrane N-deacetylase; Provisional 96.23
COG1640520 MalQ 4-alpha-glucanotransferase [Carbohydrate tran 96.1
PF13199559 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 96.07
cd06599317 GH31_glycosidase_Aec37 Glycosyl hydrolase family 3 95.9
cd06604339 GH31_glucosidase_II_MalA Alpha-glucosidase II (alp 95.79
PRK10426635 alpha-glucosidase; Provisional 95.69
PF01055441 Glyco_hydro_31: Glycosyl hydrolases family 31 ; In 95.55
smart0063281 Aamy_C Aamy_C domain. 95.38
PRK14507 1693 putative bifunctional 4-alpha-glucanotransferase/m 95.05
TIGR01370315 cysRS possible cysteinyl-tRNA synthetase, Methanoc 94.95
cd06595292 GH31_xylosidase_XylS-like This family represents a 94.53
PRK10658665 putative alpha-glucosidase; Provisional 94.3
PF11852168 DUF3372: Domain of unknown function (DUF3372); Int 94.28
cd06598317 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide 94.06
cd06601332 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) 93.36
cd06542255 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases 92.74
cd02875358 GH18_chitobiase Chitobiase (also known as di-N-ace 92.72
PF07745332 Glyco_hydro_53: Glycosyl hydrolase family 53; Inte 92.45
COG1501772 Alpha-glucosidases, family 31 of glycosyl hydrolas 92.45
cd06562348 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases c 92.16
cd06603339 GH31_GANC_GANAB_alpha This family includes the clo 91.4
cd06564326 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 ( 90.91
cd06545253 GH18_3CO4_chitinase The Bacteroides thetaiotaomicr 90.16
cd02742303 GH20_hexosaminidase Beta-N-acetylhexosaminidases o 90.1
KOG1065805 consensus Maltase glucoamylase and related hydrola 90.0
PF14488166 DUF4434: Domain of unknown function (DUF4434) 89.79
PLN02763 978 hydrolase, hydrolyzing O-glycosyl compounds 89.73
cd06568329 GH20_SpHex_like A subgroup of the Glycosyl hydrola 89.42
PF01120346 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR00 88.53
cd06589265 GH31 The enzymes of glycosyl hydrolase family 31 ( 88.28
PF14883294 GHL13: Hypothetical glycosyl hydrolase family 13 88.0
smart00812384 Alpha_L_fucos Alpha-L-fucosidase. O-Glycosyl hydro 87.94
cd0580895 CBM20_alpha_amylase Alpha-amylase, C-terminal CBM2 87.83
PF02449374 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 87.33
PRK12568730 glycogen branching enzyme; Provisional 85.75
COG3280889 TreY Maltooligosyl trehalose synthase [Carbohydrat 85.13
cd06547339 GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENG 83.96
cd06565301 GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) 83.72
cd06563357 GH20_chitobiase-like The chitobiase of Serratia ma 82.33
PF1043878 Cyc-maltodext_C: Cyclo-malto-dextrinase C-terminal 81.61
PF0068696 CBM_20: Starch binding domain; InterPro: IPR002044 81.17
cd0581699 CBM20_DPE2_repeat2 Disproportionating enzyme 2 (DP 81.03
cd02871312 GH18_chitinase_D-like GH18 domain of Chitinase D ( 80.84
PF0853358 Glyco_hydro_42C: Beta-galactosidase C-terminal dom 80.15
>PLN02447 1,4-alpha-glucan-branching enzyme Back     alignment and domain information 
Probab=100.00  E-value=5.3e-149  Score=1306.81  Aligned_cols=733  Identities=74%  Similarity=1.278  Sum_probs=678.5

Q ss_pred             cCccEeeCCCCCCCCCCccccccCCCccccccccccccchhhcccccccccccCCcccccCcccccchhhhhccCCCCCC
Q 003230           64 ASEKVLVPGSQSDDPSAVTDQLETPETVSEDIEVRNGIESLQMEDNENVEIEDHGPVTLQGKVSSEKSEVKREVGPRSIP  143 (837)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (837)
                      .+..++.|++++++.++++.+...+.......+..+.....+.+                           .......++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~   54 (758)
T PLN02447          2 LSEHVLSPDGLPDSAPSPSPAVDEPRPEDPGSPATEAPYPAKTE---------------------------DNSAAASPP   54 (758)
T ss_pred             CccccccCCCcCCCCCCCCCCCCcCCCCCcccccccCCcccccc---------------------------cccccccCC
Confidence            46778999999999988877777766333333333222222221                           011222688


Q ss_pred             CCCCCCcceecCCCCcchHHHHHHHHHHHHHHHHHHHhhcCchhhhhcccccCCcEEeCCcEEEEEeCCCcCeEEEEeec
Q 003230          144 PPGAGQNIYEIDPNLLGHRQHLDYRYGRYKQMCEDIDKYEGGLAAFSRGYEKFGFIRSDTGITYREWAPGAKSASLIGDF  223 (837)
Q Consensus       144 ~~~~~~~~~~~dp~l~~~~~~l~~r~~~~~~~~~~i~~~~g~l~~f~~~y~~lG~~~~~~gv~FrvWAP~A~~V~LvgDF  223 (837)
                      +|.++.+|+++||||+||+++|++|+.+|.+++++|.+.+|||++|+++|++||+|+.++||+||||||+|++|+|+|||
T Consensus        55 ~~~~~~~~~~~d~~l~~~~~~~~~r~~~~~~~~~~i~~~~~~l~~f~~~y~~lGa~~~~~g~~FrvWAP~A~~V~LvGdF  134 (758)
T PLN02447         55 PPGDGLGIYEIDPMLEPYEDHLRYRYSRYRRRREEIEKNEGGLEAFSRGYEKFGFNRSEGGITYREWAPGAKAAALIGDF  134 (758)
T ss_pred             CCCCcceeeecCcchhhHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHhceeEEecCCEEEEEECCCCCEEEEEEec
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCccccccCCCceEEEEeCCCCCCCCCCCCCCEEEEEEeCCCC-ccccCCccceecccCCCCC--CCCcEEeCCCc
Q 003230          224 NNWNPNADIMTQNEFGVWEIFLPNNADGSPPIPHGSRVKIHMDTPSG-IKDSIPAWIKFSVQAPGEI--PYNGIYYDPPE  300 (837)
Q Consensus       224 N~w~~~~~~m~~~~~GvW~~~ip~~~~g~~~~~~g~~yk~~v~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~  300 (837)
                      |+|++..++|++.++|+|+++||+ .+|.++++||++|||+|.+.+| ..+++|||++++++.|++.  .+++++|||++
T Consensus       135 N~W~~~~~~M~~~~~GvWe~~ip~-~~g~~~~~~G~~Yky~i~~~~g~~~~r~dpya~~~~~~p~~~~~~~~svv~dp~~  213 (758)
T PLN02447        135 NNWNPNAHWMTKNEFGVWEIFLPD-ADGSPAIPHGSRVKIRMETPDGRWVDRIPAWIKYAVQAPGEIGAPYNGVYWDPPE  213 (758)
T ss_pred             CCCCCCccCceeCCCCEEEEEECC-ccccccCCCCCEEEEEEEeCCCcEEeecCchHheeeccCCccCCCCceEEeCCCC
Confidence            999998999999999999999999 8899999999999999998866 4689999999999988753  68999999976


Q ss_pred             cccccccCCCCCCCCCceEEEeecCCCCCCCCCCCHHhhHhhhhhHHHHcCCCEEEEcCcccCCCCCCCCCccccccCCC
Q 003230          301 EEKYVFQHPQPKKPKSLRIYEAHVGMSSTEPIINTYANFRDDVLPRIKRLGYNAVQIMAVQEHSYYASFGYHVTNFFAPS  380 (837)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~IYE~hv~~f~~~~~~Gt~~~~~~~~LdyLk~LGvt~I~LmPi~e~~~~~s~GY~v~~y~a~~  380 (837)
                      .++|.|+++++..+.+++|||+|||+|+.++++|||+++++++|||||+|||||||||||++++++++|||++++||+|+
T Consensus       214 ~~~y~w~~~~~~~~~~~~IYE~Hvg~~~~~~~~gty~~~~~~~L~ylk~LG~t~I~LmPi~e~~~~~~wGY~~~~~fa~~  293 (758)
T PLN02447        214 EEKYVFKHPRPPRPAALRIYEAHVGMSSEEPKVNSYREFADDVLPRIKALGYNAVQLMAIQEHAYYGSFGYHVTNFFAVS  293 (758)
T ss_pred             CCCCCCCCCCCCCCCCCEEEEEeCCcccCCCCCCCHHHHHHHHHHHHHHcCCCEEEECCccccCCCCCCCcCcccCcccc
Confidence            66799998887778899999999999998888999999998899999999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCEEEEeeccccccCCCcccccCCCCCCCCccccCCCCCcccCCCCCCCCCCHHHHHHHHH
Q 003230          381 SRCGTPDDLKSLIDKAHELGLLVLMDIVHSHASNNVLDGLNMFDGTDGHYFHSGSRGYHWMWDSRLFNYGSWEVLRFLLS  460 (837)
Q Consensus       381 ~~~Gt~edfk~LV~~aH~~GI~VIlDvV~NH~s~~~~~~~~~fdg~~~~yf~~~~~g~~~~w~~~~ln~~~~eV~~~l~~  460 (837)
                      ++|||++|||+||++||++||+||||+|+||++.++..+++.|+|+.+.||+.+..++++.|++.+|||++++||+||++
T Consensus       294 ~~~Gtp~dlk~LVd~aH~~GI~VilDvV~nH~~~~~~~gl~~fDg~~~~Yf~~~~~g~~~~w~~~~~N~~~~eVr~fLl~  373 (758)
T PLN02447        294 SRSGTPEDLKYLIDKAHSLGLRVLMDVVHSHASKNTLDGLNGFDGTDGSYFHSGPRGYHWLWDSRLFNYGNWEVLRFLLS  373 (758)
T ss_pred             cccCCHHHHHHHHHHHHHCCCEEEEEeccccccccccccccccCCCCccccccCCCCCcCcCCCceecCCCHHHHHHHHH
Confidence            99999999999999999999999999999999998877889999988889998888888999999999999999999999


Q ss_pred             HHHHHHHHcCCCeEEEcccccccccccCccccccCCcccccCcccChhHHHHHHHHHHHhhccCCCeEEEEecCCCCCcc
Q 003230          461 NARWWLEEYKFDGFRFDGVTSMMYTHHGLQVAFTGNYSEYFGFATDVDAVVYLMLVNDMIHGLYPEAVSIGEDVSGMPTF  540 (837)
Q Consensus       461 ~l~~Wl~e~gvDGfR~D~v~~m~~~~~g~~~~f~~~~~~~~g~~~d~~~~~fl~~~~~~v~~~~P~~~~iaE~~~~~p~~  540 (837)
                      +++||++||||||||||+|++|+|.|||+..+|+++|+++||+++|.+++.||+++|+.|++.+|++++|||+++++|.+
T Consensus       374 ~~~~Wl~ey~IDGfRfDaV~smlY~~hg~~~~f~~~~~~~~g~~~d~~a~~fL~~~N~~i~~~~p~~~~IAEd~s~~p~l  453 (758)
T PLN02447        374 NLRWWLEEYKFDGFRFDGVTSMLYHHHGLQMAFTGNYNEYFGMATDVDAVVYLMLANDLLHGLYPEAVTIAEDVSGMPTL  453 (758)
T ss_pred             HHHHHHHHhCcccccccchhhhhccccCcccccccCcccccCCccChHHHHHHHHHHHHHHHhCCCeEEEEEcCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeccccCCcccchhhhhhHHHHHHHHHhh-cchhhhhhhhHHhhccCcccccceecccCcccccccccchhhhccChhHH
Q 003230          541 CIPVQDGGVGFDYRLQMAIADKWIELLKK-RDEDWKMGAIVHTMTNRRWLEKCVAYAESHDQALVGDKTIAFWLMDKDMY  619 (837)
Q Consensus       541 ~~~~~~gglgfD~~~~~~~~d~~~~~lk~-~~~~~~~~~l~~~l~~~~~~~~~v~ylenHD~~r~g~~~~~~~~~~~~~~  619 (837)
                      |+|+..||+||||+|+|+|+++|+++|+. .++.|.++.+.++++++++.+++|.|++||||+++|++++++|+|+++||
T Consensus       454 ~~p~~~GGlGFDykw~Mg~~~~~l~~l~~~~d~~~~~~~l~~sl~~r~~~E~~I~y~eSHDevv~Gkksl~~~l~d~~my  533 (758)
T PLN02447        454 CRPVQEGGVGFDYRLAMAIPDKWIELLKEKRDEDWSMGDIVHTLTNRRYTEKCVAYAESHDQALVGDKTIAFWLMDKEMY  533 (758)
T ss_pred             cccCCCCcCCcceEECCccchHHHHHHhhCCCcccCHHHHHHHHhcccccCceEeccCCcCeeecCcchhHhhhcchhhh
Confidence            99999999999999999999999999996 68899999999999999999999999999999999999999999999999


Q ss_pred             HhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCceEeecccccCCCCCCCCCCCCCCCCCCCcCCCCCCCCcccCccccC
Q 003230          620 DFMALDRPSTPRIDRGIALHKMIRLVTMGLGGEAYLNFMGNEFGHPEWIDFPRGDQRLPNGQFVPGNNFSYDKCRRRFDL  699 (837)
Q Consensus       620 ~~~~~~~~~~~~~~~g~al~kla~~l~ltlpG~p~L~y~G~E~G~~e~~d~p~~~~~~~~~~~~~gn~~s~~~~r~~~~w  699 (837)
                      +.|+++.+.++.++|+++++||+++++|++||.++|||||+|||+++|+|||++           +|++++.++|++|++
T Consensus       534 ~~m~~~~~~~~~~~R~~~lhkmirl~~~~~pG~g~L~FMGnEFg~~ew~Dfpr~-----------~n~ws~~~~~~~W~L  602 (758)
T PLN02447        534 DGMSTLTPATPVVDRGIALHKMIRLITMALGGEGYLNFMGNEFGHPEWIDFPRE-----------GNGWSYDKCRRRWDL  602 (758)
T ss_pred             hcCCCChhhhhhHHHHHHHHHHHHHHHHhCCCCcceeecccccCCchhccCccc-----------ccccCcccccCCccc
Confidence            999999999999999999999999999999999899999999999999999994           999999999988888


Q ss_pred             CccccccchHHHHHHHHHHHHHHHhcCCCCCcEEEEeecCCCcEEEEEcCcEEEEEECCCCCcccceEEcccCCccEEEE
Q 003230          700 GDADYLRYRGMQEFDRAMQHLEEKYGFMTSEHQYVSRKDEGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIV  779 (837)
Q Consensus       700 ~~~~~~~~~~l~~f~r~Li~LR~~~~~L~~g~~~i~~~~~~~~Vlaf~R~~llvv~Nf~~~~~~~~~~l~~~~~g~~~~v  779 (837)
                      .+.+.++++.|++|+|+|++|++++++|..+++|+.+.+++++||||+|..+||||||+|++++.+|+|++|.+|+|+++
T Consensus       603 ~d~~~l~~~~l~~f~~~L~~l~~~~~~L~~~~~~i~~~d~~~~Viaf~R~~ll~V~NF~p~~s~~~Y~igvp~~G~y~~i  682 (758)
T PLN02447        603 ADADHLRYKFLNAFDRAMMHLDEKYGFLTSEHQYVSRKDEGDKVIVFERGDLVFVFNFHPTNSYSDYRVGCDKPGKYKIV  682 (758)
T ss_pred             cCCCchhhhHHHHHHHHHHHHHhcCccccCCCceeeeecCCCCEEEEEeCCeEEEEeCCCCCCCCCcEECCCCCCeEEEE
Confidence            76666689999999999999999999999999999999999999999999999999999878899999999999999999


Q ss_pred             EeCCCCCcCCccccCCCcceeccccccCCCCeEEEEEEcCceEEEEEEcCCccCCC
Q 003230          780 LDSDDPLFGGYKRLDHNAEYFSLEGWYDDQPHSFLVYAPSRTAVVYALADEEEQPL  835 (837)
Q Consensus       780 lnsd~~~~gG~~~~~~~~~~~~~~~~~~~~~~~l~l~Lp~~s~~Vl~~~~~~~~~~  835 (837)
                      ||||+..|||+++++....+.+.+.+|+++++++.|+|||++++||+++++.+++.
T Consensus       683 lnSD~~~fGG~~~~~~~~~~~~~~~~~~~~~~s~~v~iP~~~~~vl~~~~~~~~~~  738 (758)
T PLN02447        683 LDSDAWEFGGFGRVDHDADHFTPEGNFDNRPHSFMVYAPSRTAVVYAPVDEDDEPA  738 (758)
T ss_pred             ECCCchhcCCCCccCCCccEEecccCcCCCCcEEEEEeCCceEEEEEECCcccccc
Confidence            99999999999998866678888888999999999999999999999987655543

>PLN03244 alpha-amylase; Provisional Back     alignment and domain information
>KOG0470 consensus 1,4-alpha-glucan branching enzyme/starch branching enzyme II [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02960 alpha-amylase Back     alignment and domain information
>PRK12568 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK14706 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK14705 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK05402 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK12313 glycogen branching enzyme; Provisional Back     alignment and domain information
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase Back     alignment and domain information
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02104 pulA_typeI pullulanase, type I Back     alignment and domain information
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information
>TIGR02100 glgX_debranch glycogen debranching enzyme GlgX Back     alignment and domain information
>TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive Back     alignment and domain information
>PRK03705 glycogen debranching enzyme; Provisional Back     alignment and domain information
>TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type Back     alignment and domain information
>PLN02877 alpha-amylase/limit dextrinase Back     alignment and domain information
>PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional Back     alignment and domain information
>PRK10785 maltodextrin glucosidase; Provisional Back     alignment and domain information
>TIGR02456 treS_nterm trehalose synthase Back     alignment and domain information
>PRK10933 trehalose-6-phosphate hydrolase; Provisional Back     alignment and domain information
>COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase Back     alignment and domain information
>PRK09505 malS alpha-amylase; Reviewed Back     alignment and domain information
>PRK09441 cytoplasmic alpha-amylase; Reviewed Back     alignment and domain information
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PLN00196 alpha-amylase; Provisional Back     alignment and domain information
>PLN02361 alpha-amylase Back     alignment and domain information
>PRK13840 sucrose phosphorylase; Provisional Back     alignment and domain information
>TIGR03852 sucrose_gtfA sucrose phosphorylase Back     alignment and domain information
>TIGR02455 TreS_stutzeri trehalose synthase, Pseudomonas stutzeri type Back     alignment and domain information
>COG0366 AmyA Glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02784 alpha-amylase Back     alignment and domain information
>KOG0471 consensus Alpha-amylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02401 trehalose_TreY malto-oligosyltrehalose synthase Back     alignment and domain information
>PRK14511 maltooligosyl trehalose synthase; Provisional Back     alignment and domain information
>KOG2212 consensus Alpha-amylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>smart00642 Aamy Alpha-amylase domain Back     alignment and domain information
>cd02854 Glycogen_branching_enzyme_like_N_term Glycogen branching enzyme-like N-terminus domain Back     alignment and domain information
>PF14872 GHL5: Hypothetical glycoside hydrolase 5 Back     alignment and domain information
>PRK14507 putative bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase; Provisional Back     alignment and domain information
>TIGR01531 glyc_debranch glycogen debranching enzymye Back     alignment and domain information
>COG3280 TreY Maltooligosyl trehalose synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02922 CBM_48: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); InterPro: IPR004193 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd02860 Pullulanase_N_term Pullulanase domain N-terminus Back     alignment and domain information
>cd02855 Glycogen_branching_enzyme_N_term Glycogen branching enzyme N-terminus domain Back     alignment and domain information
>cd02856 Glycogen_debranching_enzyme_N_term Glycogen_debranching_enzyme N-terminal domain Back     alignment and domain information
>PF02806 Alpha-amylase_C: Alpha amylase, C-terminal all-beta domain; InterPro: IPR006048 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd02853 MTHase_N_term Maltooligosyl trehalose synthase (MTSase) N-terminus domain Back     alignment and domain information
>cd02852 Isoamylase_N_term Isoamylase N-terminus domain Back     alignment and domain information
>PRK05402 glycogen branching enzyme; Provisional Back     alignment and domain information
>cd02858 Esterase_N_term Esterase N-terminal domain Back     alignment and domain information
>cd02861 E_set_proteins_like E or "early" set-like proteins Back     alignment and domain information
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function Back     alignment and domain information
>cd02688 E_set E or "early" set of sugar utilizing enzymes which may be related to the immunoglobulin and/or fibronectin type III superfamilies Back     alignment and domain information
>PF14701 hDGE_amylase: glucanotransferase domain of human glycogen debranching enzyme Back     alignment and domain information
>PF11941 DUF3459: Domain of unknown function (DUF3459); InterPro: IPR022567 This functionally uncharacterised domain is found in bacteria Back     alignment and domain information
>KOG3625 consensus Alpha amylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6 Back     alignment and domain information
>PRK14508 4-alpha-glucanotransferase; Provisional Back     alignment and domain information
>PF02446 Glyco_hydro_77: 4-alpha-glucanotransferase; InterPro: IPR003385 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PLN02950 4-alpha-glucanotransferase Back     alignment and domain information
>cd02859 AMPKbeta_GBD_like AMP-activated protein kinase (AMPK) beta subunit glycogen binding domain (GBD) Back     alignment and domain information
>PF02324 Glyco_hydro_70: Glycosyl hydrolase family 70; InterPro: IPR003318 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PLN02635 disproportionating enzyme Back     alignment and domain information
>PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional Back     alignment and domain information
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride Back     alignment and domain information
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose Back     alignment and domain information
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ Back     alignment and domain information
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase Back     alignment and domain information
>PF02324 Glyco_hydro_70: Glycosyl hydrolase family 70; InterPro: IPR003318 O-Glycosyl hydrolases 3 Back     alignment and domain information
>TIGR00217 malQ 4-alpha-glucanotransferase Back     alignment and domain information
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II Back     alignment and domain information
>PRK11052 malQ 4-alpha-glucanotransferase; Provisional Back     alignment and domain information
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF13200 DUF4015: Putative glycosyl hydrolase domain Back     alignment and domain information
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate Back     alignment and domain information
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase Back     alignment and domain information
>PRK14582 pgaB outer membrane N-deacetylase; Provisional Back     alignment and domain information
>COG1640 MalQ 4-alpha-glucanotransferase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF13199 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 3VMO_A 3VMN_A 3VMP_A Back     alignment and domain information
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37 Back     alignment and domain information
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities Back     alignment and domain information
>PRK10426 alpha-glucosidase; Provisional Back     alignment and domain information
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3 Back     alignment and domain information
>smart00632 Aamy_C Aamy_C domain Back     alignment and domain information
>PRK14507 putative bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase; Provisional Back     alignment and domain information
>TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type Back     alignment and domain information
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus Back     alignment and domain information
>PRK10658 putative alpha-glucosidase; Provisional Back     alignment and domain information
>PF11852 DUF3372: Domain of unknown function (DUF3372); InterPro: IPR024561 This entry represents the uncharacterised C-terminal domain of secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants Back     alignment and domain information
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY Back     alignment and domain information
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end Back     alignment and domain information
>cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins Back     alignment and domain information
>cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes Back     alignment and domain information
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides Back     alignment and domain information
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB) Back     alignment and domain information
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins Back     alignment and domain information
>cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas Back     alignment and domain information
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides Back     alignment and domain information
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF14488 DUF4434: Domain of unknown function (DUF4434) Back     alignment and domain information
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex) Back     alignment and domain information
>PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase Back     alignment and domain information
>PF14883 GHL13: Hypothetical glycosyl hydrolase family 13 Back     alignment and domain information
>smart00812 Alpha_L_fucos Alpha-L-fucosidase Back     alignment and domain information
>cd05808 CBM20_alpha_amylase Alpha-amylase, C-terminal CBM20 (carbohydrate-binding module, family 20) domain Back     alignment and domain information
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK12568 glycogen branching enzyme; Provisional Back     alignment and domain information
>COG3280 TreY Maltooligosyl trehalose synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06547 GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENGase) hydrolyzes the N-N'-diacetylchitobiosyl core of N-glycosylproteins Back     alignment and domain information
>cd06565 GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins Back     alignment and domain information
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin Back     alignment and domain information
>PF10438 Cyc-maltodext_C: Cyclo-malto-dextrinase C-terminal domain; InterPro: IPR019492 This domain is at the very C terminus of cyclo-malto-dextrinase proteins and consists of 8 beta strands, is largely globular and appears to help stabilise the active sites created by upstream domains, IPR015171 from INTERPRO, and IPR006047 from INTERPRO Back     alignment and domain information
>PF00686 CBM_20: Starch binding domain; InterPro: IPR002044 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd05816 CBM20_DPE2_repeat2 Disproportionating enzyme 2 (DPE2), N-terminal CBM20 (carbohydrate-binding module, family 20) domain, repeat 2 Back     alignment and domain information
>cd02871 GH18_chitinase_D-like GH18 domain of Chitinase D (ChiD) Back     alignment and domain information
>PF08533 Glyco_hydro_42C: Beta-galactosidase C-terminal domain; InterPro: IPR013739 O-Glycosyl hydrolases 3 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query837
3amk_A702 Structure Of The Starch Branching Enzyme I (Bei) Fr 0.0
3aml_A755 Structure Of The Starch Branching Enzyme I (Bei) Fr 0.0
1m7x_A617 The X-Ray Crystallographic Structure Of Branching E 1e-43
3k1d_A722 Crystal Structure Of Glycogen Branching Enzyme Syno 4e-43
3vgg_A558 Crystal Structure Of Glycosyltrehalose Trehalohydro 1e-16
1eha_A558 Crystal Structure Of Glycosyltrehalose Trehalohydro 1e-16
1eh9_A558 Crystal Structure Of Sulfolobus Solfataricus Glycos 1e-16
2bhu_A602 Crystal Structure Of Deinococcus Radiodurans Maltoo 1e-16
3vgd_A558 Ctystal Structure Of Glycosyltrehalose Trehalohydro 3e-16
3vge_A558 Crystal Structure Of Glycosyltrehalose Trehalohydro 6e-16
2bhy_A602 Crystal Structure Of Deinococcus Radiodurans Maltoo 2e-15
3m07_A618 1.4 Angstrom Resolution Crystal Structure Of Putati 2e-13
4gkl_A422 Crystal Structure Of A Noncanonic Maltogenic Alpha- 9e-09
2vnc_A718 Crystal Structure Of Glycogen Debranching Enzyme Tr 3e-08
2wsk_A657 Crystal Structure Of Glycogen Debranching Enzyme Gl 3e-08
2e8y_A718 Crystal Structure Of Pullulanase Type I From Bacill 3e-07
2ze0_A555 Alpha-glucosidase Gsj Length = 555 2e-06
3faw_A877 Crystal Structure Of The Group B Streptococcus Pull 4e-06
1wza_A488 Crystal Structure Of Alpha-Amylase From H.Orenii Le 7e-06
2wan_A921 Pullulanase From Bacillus Acidopullulyticus Length 2e-05
2ya2_A708 Catalytic Module Of The Multi-Modular Glycogen-Degr 3e-05
2ya0_A714 Catalytic Module Of The Multi-Modular Glycogen-Degr 4e-05
2ya1_A1014 Product Complex Of A Multi-Modular Glycogen-Degradi 4e-05
3dhu_A449 Crystal Structure Of An Alpha-Amylase From Lactobac 5e-05
1ea9_C583 Cyclomaltodextrinase Length = 583 9e-05
1bf2_A750 Structure Of Pseudomonas Isoamylase Length = 750 4e-04
1j0j_A588 Crystal Structure Of Neopullulanase E357q Complex W 4e-04
1j0h_A588 Crystal Structure Of Bacillus Stearothermophilus Ne 4e-04
1d7f_A686 Crystal Structure Of Asparagine 233-Replaced Cyclod 6e-04
2taa_A478 Structure And Possible Catalytic Residues Of Taka-A 7e-04
>pdb|3AMK|A Chain A, Structure Of The Starch Branching Enzyme I (Bei) From Oryza Sativa L Length = 702 Back     alignment and structure 
Iteration: 1

 Score =  819 bits (2115), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/700 (57%), Positives = 505/700 (72%), Gaps = 27/700 (3%)
Query: 151 IYEIDPNLLGHRQHLDYRYGRYKQMCEDIDKYEGGLAAFSRGYEKFGFIRSDTGITYREW 210
           IY++DP L   + H +YR  RY      I+K+EGGL  FS+GY KFG    D    YREW
Sbjct: 13  IYDLDPKLEEFKDHFNYRIKRYLDQKCLIEKHEGGLEEFSKGYLKFGINTVDGATIYREW 72
Query: 211 APGAKSASLIGDFNNWNPNADIMTQNEFGVWEIFLPNNADGSPPIPHGSRVKIHMDTPSG 270
           AP A+ A LIG+FNNWN     M +++FG+W I + ++ +G P IPH S+VK       G
Sbjct: 73  APAAQEAQLIGEFNNWNGAKHKMEKDKFGIWSIKI-SHVNGKPAIPHNSKVKFRFRHGGG 131
Query: 271 I-KDSIPAWIKFSVQAPGEI--PYNGIYYDPPEEEKYVFQHPQPKKPKSLRIYEAHVGMS 327
              D IPAWI+++     +   PY+G+++DPP  E+YVF+HP+P KP + RIYEAHVGMS
Sbjct: 132 AWVDRIPAWIRYATFDASKFGAPYDGVHWDPPACERYVFKHPRPPKPDAPRIYEAHVGMS 191
Query: 328 STEPIINTYANFRDDVLPRIKRLGYNAVQIMAVQEHSYYASFGYHVTNFFAPSSRCGTPD 387
             EP ++TY  F D+VLPRI+   YN VQ+MA+ EHSYYASFGYHVTNFFA SSR GTP+
Sbjct: 192 GEEPEVSTYREFADNVLPRIRANNYNTVQLMAIMEHSYYASFGYHVTNFFAVSSRSGTPE 251
Query: 388 DLKSLIDKAHELGLLVLMDIVHSHASNNVLDGLNMFD-GTDGH--YFHSGSRGYHWMWDS 444
           DLK L+DKAH LGL VLMD+VHSHASNNV DGLN +D G + H  YFH+G RGYH +WDS
Sbjct: 252 DLKYLVDKAHSLGLRVLMDVVHSHASNNVTDGLNGYDVGQNTHESYFHTGDRGYHKLWDS 311
Query: 445 RLFNYGSWEVLRFLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLQVAFTGNYSEYFGFA 504
           RLFNY +WEVLRFLLSN R+W++E+ FDGFRFDGVTSM+Y HHG+   FTGNY EYF   
Sbjct: 312 RLFNYANWEVLRFLLSNLRYWMDEFMFDGFRFDGVTSMLYHHHGINKGFTGNYKEYFSLD 371
Query: 505 TDVDAVVYLMLVNDMIHGLYPEAVSIGEDVSGMPTFCIPVQDGGVGFDYRLQMAIADKWI 564
           TDVDA+VY+ML N ++H L PEA  + EDVSGMP  C PV +GGVGFD+RL MAI D+WI
Sbjct: 372 TDVDAIVYMMLANHLMHKLLPEATIVAEDVSGMPVLCRPVDEGGVGFDFRLAMAIPDRWI 431
Query: 565 ELLK-KRDEDWKMGAIVHTMTNRRWLEKCVAYAESHDQALVGDKTIAFWLMDKDMYDFMA 623
           + LK K D  W M  IV T+TNRR+ EKC+AYAESHDQ++VGDKTIAF LMDK+MY  M+
Sbjct: 432 DYLKNKEDRKWSMSEIVQTLTNRRYTEKCIAYAESHDQSIVGDKTIAFLLMDKEMYTGMS 491
Query: 624 LDRPSTPRIDRGIALHKMIRLVTMGLGGEAYLNFMGNEFGHPEWIDFPRGDQRLPNGQFV 683
             +P++P I+RGIAL KMI  +TM LGG+ YLNFMGNEFGHPEWIDFPR           
Sbjct: 492 DLQPASPTINRGIALQKMIHFITMALGGDGYLNFMGNEFGHPEWIDFPR----------- 540
Query: 684 PGNNFSYDKCRRRFDLGDADYLRYRGMQEFDRAMQHLEEKYGFMTSEHQYVSRKDEGDRV 743
            GNN+SYDKCRR++ L D D+LRY+ M  FD+AM  LEE++ F++S  Q VS  +E D+V
Sbjct: 541 EGNNWSYDKCRRQWSLVDTDHLRYKYMNAFDQAMNALEEEFSFLSSSKQIVSDMNEKDKV 600
Query: 744 IVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDDPLFGGYKRLDHNAEYFSL- 802
           IVFERG+LVFVFNFH N +Y  Y+VGC  PGKY++ LDSD  +FGG+ R+ H+ ++F+  
Sbjct: 601 IVFERGDLVFVFNFHPNKTYKGYKVGCDLPGKYRVALDSDALVFGGHGRVGHDVDHFTSP 660
Query: 803 -------EGWYDDQPHSFLVYAPSRTAVVYALADEEEQPL 835
                  E  ++++P+SF V +P RT V Y   DE+ + L
Sbjct: 661 EGMPGVPETNFNNRPNSFKVLSPPRTCVAYYRVDEDREEL 700
>pdb|3AML|A Chain A, Structure Of The Starch Branching Enzyme I (Bei) From Oryza Sativa L Length = 755 Back     alignment and structure
>pdb|1M7X|A Chain A, The X-Ray Crystallographic Structure Of Branching Enzyme Length = 617 Back     alignment and structure
>pdb|3K1D|A Chain A, Crystal Structure Of Glycogen Branching Enzyme Synonym: 1,4- Glucan:1,4-Alpha-D-Glucan 6-Glucosyl-Transferase From Mycob Tuberculosis H37rv Length = 722 Back     alignment and structure
>pdb|3VGG|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase (E283q) Complexed With Maltoheptaose Length = 558 Back     alignment and structure
>pdb|1EHA|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase From Sulfolobus Solfataricus Length = 558 Back     alignment and structure
>pdb|1EH9|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Glycosyltrehalose Trehalohydrolase Length = 558 Back     alignment and structure
>pdb|2BHU|A Chain A, Crystal Structure Of Deinococcus Radiodurans Maltooligosyltrehalose Trehalohydrolase Length = 602 Back     alignment and structure
>pdb|3VGD|A Chain A, Ctystal Structure Of Glycosyltrehalose Trehalohydrolase (D252e) Length = 558 Back     alignment and structure
>pdb|3VGE|A Chain A, Crystal Structure Of Glycosyltrehalose Trehalohydrolase (D252s) Length = 558 Back     alignment and structure
>pdb|2BHY|A Chain A, Crystal Structure Of Deinococcus Radiodurans Maltooligosyltrehalose Trehalohydrolase In Complex With Trehalose Length = 602 Back     alignment and structure
>pdb|3M07|A Chain A, 1.4 Angstrom Resolution Crystal Structure Of Putative Alpha Amylase From Salmonella Typhimurium Length = 618 Back     alignment and structure
>pdb|4GKL|A Chain A, Crystal Structure Of A Noncanonic Maltogenic Alpha-amylase Amyb From Thermotoga Neapolitana Length = 422 Back     alignment and structure
>pdb|2VNC|A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Trex From Sulfolobus Solfataricus Length = 718 Back     alignment and structure
>pdb|2WSK|A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Glgx From Escherichia Coli K-12 Length = 657 Back     alignment and structure
>pdb|2E8Y|A Chain A, Crystal Structure Of Pullulanase Type I From Bacillus Subtilis Str. 168 Length = 718 Back     alignment and structure
>pdb|2ZE0|A Chain A, Alpha-glucosidase Gsj Length = 555 Back     alignment and structure
>pdb|3FAW|A Chain A, Crystal Structure Of The Group B Streptococcus Pullulanase Sap Length = 877 Back     alignment and structure
>pdb|1WZA|A Chain A, Crystal Structure Of Alpha-Amylase From H.Orenii Length = 488 Back     alignment and structure
>pdb|2WAN|A Chain A, Pullulanase From Bacillus Acidopullulyticus Length = 921 Back     alignment and structure
>pdb|2YA2|A Chain A, Catalytic Module Of The Multi-Modular Glycogen-Degrading Pneumococcal Virulence Factor Spua In Complex With An Inhibitor Length = 708 Back     alignment and structure
>pdb|2YA0|A Chain A, Catalytic Module Of The Multi-Modular Glycogen-Degrading Pneumococcal Virulence Factor Spua Length = 714 Back     alignment and structure
>pdb|2YA1|A Chain A, Product Complex Of A Multi-Modular Glycogen-Degrading Pneumococcal Virulence Factor Spua Length = 1014 Back     alignment and structure
>pdb|3DHU|A Chain A, Crystal Structure Of An Alpha-Amylase From Lactobacillus Plantarum Length = 449 Back     alignment and structure
>pdb|1EA9|C Chain C, Cyclomaltodextrinase Length = 583 Back     alignment and structure
>pdb|1BF2|A Chain A, Structure Of Pseudomonas Isoamylase Length = 750 Back     alignment and structure
>pdb|1J0J|A Chain A, Crystal Structure Of Neopullulanase E357q Complex With Maltotetraose Length = 588 Back     alignment and structure
>pdb|1J0H|A Chain A, Crystal Structure Of Bacillus Stearothermophilus Neopullulanase Length = 588 Back     alignment and structure
>pdb|1D7F|A Chain A, Crystal Structure Of Asparagine 233-Replaced Cyclodextrin Glucanotransferase From Alkalophilic Bacillus Sp. 1011 Determined At 1.9 A Resolution Length = 686 Back     alignment and structure
>pdb|2TAA|A Chain A, Structure And Possible Catalytic Residues Of Taka-Amylase A Length = 478 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query837
3aml_A755 OS06G0726400 protein; starch-branching, transferas 0.0
1m7x_A617 1,4-alpha-glucan branching enzyme; alpha/beta barr 6e-65
1m7x_A617 1,4-alpha-glucan branching enzyme; alpha/beta barr 5e-11
3k1d_A722 1,4-alpha-glucan-branching enzyme; mycobacterium t 3e-63
3k1d_A722 1,4-alpha-glucan-branching enzyme; mycobacterium t 5e-10
2bhu_A602 Maltooligosyltrehalose trehalohydrolase; alpha-amy 2e-55
3vgf_A558 Malto-oligosyltrehalose trehalohydrolase; alpha/be 8e-52
3m07_A618 Putative alpha amylase; IDP00968, csgid, structura 2e-47
3faw_A877 Reticulocyte binding protein; TIM barrel, beta bar 2e-21
2ya1_A1014 Putative alkaline amylopullulanase; hydrolase, gly 2e-21
2ya0_A714 Putative alkaline amylopullulanase; hydrolase, gly 4e-21
2wan_A921 Pullulanase; hydrolase, glycoside hydrolase, polys 8e-21
2guy_A478 Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; 2e-20
4aio_A884 Limit dextrinase; hydrolase, pullulanase, glycosid 1e-19
2aaa_A484 Alpha-amylase; glycosidase; 2.10A {Aspergillus nig 1e-19
2e8y_A718 AMYX protein, pullulanase; multiple domain, beta-a 8e-19
3edf_A601 FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c 2e-18
1ua7_A422 Alpha-amylase; beta-alpha-barrels, acarbose, greek 2e-18
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 4e-18
1gcy_A527 Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b 2e-17
1qho_A 686 Alpha-amylase; glycoside hydrolase, starch degrada 6e-17
1cyg_A 680 Cyclodextrin glucanotransferase; glycosyltransfera 1e-16
1mxg_A435 Alpha amylase; hyperthermostable, family 13 glycos 1e-16
1ea9_C583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 3e-16
3bmv_A 683 Cyclomaltodextrin glucanotransferase; glycosidase, 5e-16
1d3c_A 686 Cyclodextrin glycosyltransferase; alpha-amylase, p 1e-15
2wc7_A488 Alpha amylase, catalytic region; CD/PUL-hydrolyzin 1e-15
2z1k_A475 (NEO)pullulanase; hydrolase, structural genomics, 3e-15
1ht6_A405 AMY1, alpha-amylase isozyme 1; barley, beta-alpha- 4e-15
1wzl_A585 Alpha-amylase II; pullulan, GH-13, alpha-amylase f 4e-15
3dhu_A449 Alpha-amylase; structural genomics, hydrolase, gly 5e-15
2wsk_A657 Glycogen debranching enzyme; carbohydrate metaboli 8e-15
1wpc_A485 Glucan 1,4-alpha-maltohexaosidase; maltohexaose-pr 5e-14
1bf2_A750 Isoamylase; hydrolase, glycosidase, debranching en 1e-13
2vr5_A718 Glycogen operon protein GLGX; hydrolase, glycosida 2e-13
3bc9_A599 AMYB, alpha amylase, catalytic region; acarbose, t 2e-13
1ud2_A480 Amylase, alpha-amylase; calcium-free, alkaline, hy 4e-13
4aee_A696 Alpha amylase, catalytic region; hydrolase, hypert 1e-12
3bh4_A483 Alpha-amylase; calcium, carbohydrate metabolism, g 4e-12
3zss_A695 Putative glucanohydrolase PEP1A; alpha-glucan bios 1e-11
1hvx_A515 Alpha-amylase; hydrolase, glycosyltransferase, the 4e-11
1jae_A471 Alpha-amylase; glycosidase, carbohydrate metabolis 5e-11
1gjw_A637 Maltodextrin glycosyltransferase; alpha-amylase, m 9e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-07
1g94_A448 Alpha-amylase; beta-alpha-8-barrel, 3 domain struc 3e-10
1hx0_A496 Alpha amylase (PPA); inhibitor, carbohydrate, panc 1e-09
1ji1_A637 Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 2e-09
2fhf_A1083 Pullulanase; multiple domain, beta-alpha-barrel, a 7e-09
3aie_A844 Glucosyltransferase-SI; beta-alpha-barrels; HET: M 1e-07
1lwj_A441 4-alpha-glucanotransferase; alpha-amylase family, 4e-07
3ucq_A655 Amylosucrase; thermostability, amylose synthesis, 8e-07
2dh2_A424 4F2 cell-surface antigen heavy chain; TIM-barrel, 1e-06
3czg_A644 Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 2e-06
3k8k_A 669 Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, bet 1e-05
1g5a_A628 Amylosucrase; glycosyltransferase, glycoside hydro 2e-05
1wza_A488 Alpha-amylase A; hydrolase, halophilic, thermophil 2e-05
1iv8_A 720 Maltooligosyl trehalose synthase; beta alpha barre 5e-05
3hje_A 704 704AA long hypothetical glycosyltransferase; treha 2e-04
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A Length = 755 Back     alignment and structure
 Score = 1013 bits (2622), Expect = 0.0
 Identities = 400/710 (56%), Positives = 504/710 (70%), Gaps = 27/710 (3%)

Query: 141 SIPPPGAGQNIYEIDPNLLGHRQHLDYRYGRYKQMCEDIDKYEGGLAAFSRGYEKFGFIR 200
           ++        IY++DP L   + H +YR  RY      I+K+EGGL  FS+GY KFG   
Sbjct: 3   TVVEEVDHLPIYDLDPKLEEFKDHFNYRIKRYLDQKCLIEKHEGGLEEFSKGYLKFGINT 62

Query: 201 SDTGITYREWAPGAKSASLIGDFNNWNPNADIMTQNEFGVWEIFLPNNADGSPPIPHGSR 260
            D    YREWAP A+ A LIG+FNNWN     M +++FG+W I + +  +G P IPH S+
Sbjct: 63  VDGATIYREWAPAAQEAQLIGEFNNWNGAKHKMEKDKFGIWSIKISH-VNGKPAIPHNSK 121

Query: 261 VKIHMDTPSG-IKDSIPAWIKFSVQAPGE--IPYNGIYYDPPEEEKYVFQHPQPKKPKSL 317
           VK       G   D IPAWI+++     +   PY+G+++DPP  E+YVF+HP+P KP + 
Sbjct: 122 VKFRFRHGGGAWVDRIPAWIRYATFDASKFGAPYDGVHWDPPACERYVFKHPRPPKPDAP 181

Query: 318 RIYEAHVGMSSTEPIINTYANFRDDVLPRIKRLGYNAVQIMAVQEHSYYASFGYHVTNFF 377
           RIYEAHVGMS  EP ++TY  F D+VLPRI+   YN VQ+MA+ EHSYYASFGYHVTNFF
Sbjct: 182 RIYEAHVGMSGEEPEVSTYREFADNVLPRIRANNYNTVQLMAIMEHSYYASFGYHVTNFF 241

Query: 378 APSSRCGTPDDLKSLIDKAHELGLLVLMDIVHSHASNNVLDGLNMFD---GTDGHYFHSG 434
           A SSR GTP+DLK L+DKAH LGL VLMD+VHSHASNNV DGLN +D    T   YFH+G
Sbjct: 242 AVSSRSGTPEDLKYLVDKAHSLGLRVLMDVVHSHASNNVTDGLNGYDVGQNTHESYFHTG 301

Query: 435 SRGYHWMWDSRLFNYGSWEVLRFLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLQVAFT 494
            RGYH +WDSRLFNY +WEVLRFLLSN R+W++E+ FDGFRFDGVTSM+Y HHG+   FT
Sbjct: 302 DRGYHKLWDSRLFNYANWEVLRFLLSNLRYWMDEFMFDGFRFDGVTSMLYHHHGINKGFT 361

Query: 495 GNYSEYFGFATDVDAVVYLMLVNDMIHGLYPEAVSIGEDVSGMPTFCIPVQDGGVGFDYR 554
           GNY EYF   TDVDA+VY+ML N ++H L PEA  + EDVSGMP  C PV +GGVGFD+R
Sbjct: 362 GNYKEYFSLDTDVDAIVYMMLANHLMHKLLPEATIVAEDVSGMPVLCRPVDEGGVGFDFR 421

Query: 555 LQMAIADKWIELLK-KRDEDWKMGAIVHTMTNRRWLEKCVAYAESHDQALVGDKTIAFWL 613
           L MAI D+WI+ LK K D  W M  IV T+TNRR+ EKC+AYAESHDQ++VGDKTIAF L
Sbjct: 422 LAMAIPDRWIDYLKNKEDRKWSMSEIVQTLTNRRYTEKCIAYAESHDQSIVGDKTIAFLL 481

Query: 614 MDKDMYDFMALDRPSTPRIDRGIALHKMIRLVTMGLGGEAYLNFMGNEFGHPEWIDFPRG 673
           MDK+MY  M+  +P++P I+RGIAL KMI  +TM LGG+ YLNFMGNEFGHPEWIDFPR 
Sbjct: 482 MDKEMYTGMSDLQPASPTINRGIALQKMIHFITMALGGDGYLNFMGNEFGHPEWIDFPR- 540

Query: 674 DQRLPNGQFVPGNNFSYDKCRRRFDLGDADYLRYRGMQEFDRAMQHLEEKYGFMTSEHQY 733
                      GNN+SYDKCRR++ L D D+LRY+ M  FD+AM  LEE++ F++S  Q 
Sbjct: 541 ----------EGNNWSYDKCRRQWSLVDTDHLRYKYMNAFDQAMNALEEEFSFLSSSKQI 590

Query: 734 VSRKDEGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDDPLFGGYKRL 793
           VS  +E D+VIVFERG+LVFVFNFH N +Y  Y+VGC  PGKY++ LDSD  +FGG+ R+
Sbjct: 591 VSDMNEKDKVIVFERGDLVFVFNFHPNKTYKGYKVGCDLPGKYRVALDSDALVFGGHGRV 650

Query: 794 DHNAEYFSL--------EGWYDDQPHSFLVYAPSRTAVVYALADEEEQPL 835
            H+ ++F+         E  ++++P+SF V +P RT V Y   DE+ + L
Sbjct: 651 GHDVDHFTSPEGMPGVPETNFNNRPNSFKVLSPPRTCVAYYRVDEDREEL 700
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* Length = 617 Back     alignment and structure
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* Length = 617 Back     alignment and structure
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Length = 722 Back     alignment and structure
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Length = 722 Back     alignment and structure
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* Length = 602 Back     alignment and structure
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A Length = 558 Back     alignment and structure
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} Length = 618 Back     alignment and structure
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* Length = 877 Back     alignment and structure
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae} Length = 1014 Back     alignment and structure
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A* Length = 714 Back     alignment and structure
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} Length = 921 Back     alignment and structure
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A Length = 478 Back     alignment and structure
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A Length = 884 Back     alignment and structure
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 Length = 484 Back     alignment and structure
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* Length = 718 Back     alignment and structure
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A Length = 601 Back     alignment and structure
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A Length = 422 Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Length = 588 Back     alignment and structure
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* Length = 527 Back     alignment and structure
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A* Length = 686 Back     alignment and structure
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 Length = 680 Back     alignment and structure
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A* Length = 435 Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Length = 583 Back     alignment and structure
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A Length = 683 Back     alignment and structure
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ... Length = 686 Back     alignment and structure
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A Length = 488 Back     alignment and structure
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} Length = 475 Back     alignment and structure
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A* Length = 405 Back     alignment and structure
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A Length = 585 Back     alignment and structure
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} Length = 449 Back     alignment and structure
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12} Length = 657 Back     alignment and structure
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A* Length = 485 Back     alignment and structure
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Length = 750 Back     alignment and structure
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A Length = 718 Back     alignment and structure
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A Length = 599 Back     alignment and structure
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A Length = 480 Back     alignment and structure
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} Length = 696 Back     alignment and structure
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A Length = 483 Back     alignment and structure
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* Length = 695 Back     alignment and structure
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 Length = 515 Back     alignment and structure
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A* Length = 471 Back     alignment and structure
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A* Length = 637 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A* Length = 448 Back     alignment and structure
>1hx0_A Alpha amylase (PPA); inhibitor, carbohydrate, pancreas, hydrolase; HET: GLC AC1 BGC MAL; 1.38A {Sus scrofa} SCOP: b.71.1.1 c.1.8.1 PDB: 1wo2_A* 1ua3_A* 1kxq_A 1kxt_A 1kxv_A 1jfh_A* 1vah_A* 1ppi_A* 3l2m_A* 3l2l_A* 1dhk_A* 1ose_A* 1pig_A* 1pif_A* 1bvn_P 3oli_A* 3old_A* 3olg_A* 3ole_A* 3ij8_A* ... Length = 496 Back     alignment and structure
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A Length = 637 Back     alignment and structure
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A* Length = 1083 Back     alignment and structure
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A* Length = 844 Back     alignment and structure
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A* Length = 441 Back     alignment and structure
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A* Length = 655 Back     alignment and structure
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A Length = 424 Back     alignment and structure
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A Length = 644 Back     alignment and structure
>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A* Length = 669 Back     alignment and structure
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A* Length = 628 Back     alignment and structure
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1 Length = 488 Back     alignment and structure
>1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1 Length = 720 Back     alignment and structure
>3hje_A 704AA long hypothetical glycosyltransferase; trehalose biosynthesis, maltooligoside trehalose synthase (M family 13 glycoside hydrolases; 1.90A {Sulfolobus tokodaii str} Length = 704 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query837
3aml_A755 OS06G0726400 protein; starch-branching, transferas 100.0
3k1d_A722 1,4-alpha-glucan-branching enzyme; mycobacterium t 100.0
1m7x_A617 1,4-alpha-glucan branching enzyme; alpha/beta barr 100.0
2e8y_A718 AMYX protein, pullulanase; multiple domain, beta-a 100.0
2wan_A921 Pullulanase; hydrolase, glycoside hydrolase, polys 100.0
1wzl_A585 Alpha-amylase II; pullulan, GH-13, alpha-amylase f 100.0
2wsk_A657 Glycogen debranching enzyme; carbohydrate metaboli 100.0
3vgf_A558 Malto-oligosyltrehalose trehalohydrolase; alpha/be 100.0
2vr5_A718 Glycogen operon protein GLGX; hydrolase, glycosida 100.0
1bf2_A750 Isoamylase; hydrolase, glycosidase, debranching en 100.0
2ya0_A714 Putative alkaline amylopullulanase; hydrolase, gly 100.0
2bhu_A602 Maltooligosyltrehalose trehalohydrolase; alpha-amy 100.0
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 100.0
1ea9_C583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 100.0
3m07_A618 Putative alpha amylase; IDP00968, csgid, structura 100.0
3faw_A877 Reticulocyte binding protein; TIM barrel, beta bar 100.0
1ji1_A637 Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 100.0
2ya1_A1014 Putative alkaline amylopullulanase; hydrolase, gly 100.0
2fhf_A1083 Pullulanase; multiple domain, beta-alpha-barrel, a 100.0
4aio_A884 Limit dextrinase; hydrolase, pullulanase, glycosid 100.0
4aee_A696 Alpha amylase, catalytic region; hydrolase, hypert 100.0
4aef_A645 Neopullulanase (alpha-amylase II); hydrolase, ther 100.0
2z1k_A475 (NEO)pullulanase; hydrolase, structural genomics, 100.0
1wza_A488 Alpha-amylase A; hydrolase, halophilic, thermophil 100.0
2wc7_A488 Alpha amylase, catalytic region; CD/PUL-hydrolyzin 100.0
4aie_A549 Glucan 1,6-alpha-glucosidase; hydrolase, glycoside 100.0
1gjw_A637 Maltodextrin glycosyltransferase; alpha-amylase, m 100.0
1zja_A557 Trehalulose synthase; sucrose isomerase, alpha-amy 100.0
1m53_A570 Isomaltulose synthase; klebsiella SP. LX3, sucrose 100.0
3edf_A601 FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c 100.0
1uok_A558 Oligo-1,6-glucosidase; sugar degradation, hydrolas 100.0
3k8k_A669 Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, bet 100.0
3aj7_A589 Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydro 100.0
2zic_A543 Dextran glucosidase; TIM barrel, (beta/alpha)8-bar 100.0
2guy_A478 Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; 100.0
2aaa_A484 Alpha-amylase; glycosidase; 2.10A {Aspergillus nig 100.0
3czg_A644 Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 100.0
1lwj_A441 4-alpha-glucanotransferase; alpha-amylase family, 100.0
1g5a_A628 Amylosucrase; glycosyltransferase, glycoside hydro 100.0
2ze0_A555 Alpha-glucosidase; TIM barrel, glucoside hydrolase 100.0
3dhu_A449 Alpha-amylase; structural genomics, hydrolase, gly 100.0
3ucq_A655 Amylosucrase; thermostability, amylose synthesis, 100.0
1qho_A 686 Alpha-amylase; glycoside hydrolase, starch degrada 100.0
1d3c_A 686 Cyclodextrin glycosyltransferase; alpha-amylase, p 100.0
3bmv_A 683 Cyclomaltodextrin glucanotransferase; glycosidase, 100.0
1wpc_A485 Glucan 1,4-alpha-maltohexaosidase; maltohexaose-pr 100.0
1cyg_A 680 Cyclodextrin glucanotransferase; glycosyltransfera 100.0
1hvx_A515 Alpha-amylase; hydrolase, glycosyltransferase, the 100.0
3zss_A695 Putative glucanohydrolase PEP1A; alpha-glucan bios 100.0
3bh4_A483 Alpha-amylase; calcium, carbohydrate metabolism, g 100.0
1ud2_A480 Amylase, alpha-amylase; calcium-free, alkaline, hy 100.0
1g94_A448 Alpha-amylase; beta-alpha-8-barrel, 3 domain struc 100.0
2dh2_A424 4F2 cell-surface antigen heavy chain; TIM-barrel, 100.0
1jae_A471 Alpha-amylase; glycosidase, carbohydrate metabolis 100.0
1ua7_A422 Alpha-amylase; beta-alpha-barrels, acarbose, greek 100.0
1mxg_A435 Alpha amylase; hyperthermostable, family 13 glycos 100.0
3bc9_A599 AMYB, alpha amylase, catalytic region; acarbose, t 100.0
1ht6_A405 AMY1, alpha-amylase isozyme 1; barley, beta-alpha- 100.0
1gcy_A527 Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b 100.0
1r7a_A504 Sucrose phosphorylase; beta-alpha-barrels, dimer, 100.0
4gqr_A496 Pancreatic alpha-amylase; glycosyl hydrolase, diab 100.0
1iv8_A 720 Maltooligosyl trehalose synthase; beta alpha barre 100.0
3hje_A 704 704AA long hypothetical glycosyltransferase; treha 99.93
3aie_A 844 Glucosyltransferase-SI; beta-alpha-barrels; HET: M 99.89
3aie_A844 Glucosyltransferase-SI; beta-alpha-barrels; HET: M 99.8
3klk_A 1039 Glucansucrase; native form, open conformation, mul 99.8
3klk_A1039 Glucansucrase; native form, open conformation, mul 99.77
3ttq_A1108 Dextransucrase; (beta/alpha)8 barrel, transferase; 99.73
3ttq_A 1108 Dextransucrase; (beta/alpha)8 barrel, transferase; 99.09
1z0n_A96 5'-AMP-activated protein kinase, beta-1 subunit; b 98.91
3mi6_A745 Alpha-galactosidase; NESG, structural genomics, PS 98.29
2yfo_A720 Alpha-galactosidase-sucrose kinase agask; hydrolas 98.12
4fnq_A729 Alpha-galactosidase AGAB; glycoside hydrolase, hyd 97.92
2xn2_A732 Alpha-galactosidase; hydrolase, glycosidase; HET: 97.57
1tz7_A505 4-alpha-glucanotransferase; (beta, alpha)8- barrel 97.56
1esw_A500 Amylomaltase; (beta,alpha)8-barrel, glucanotransfe 97.44
1x1n_A524 4-alpha-glucanotransferase; disproportionating enz 97.41
1zy9_A564 Alpha-galactosidase; TM1192, struc genomics, joint 97.36
3hje_A704 704AA long hypothetical glycosyltransferase; treha 97.35
3nme_A294 Ptpkis1 protein, SEX4 glucan phosphatase; dual spe 97.18
1qnr_A344 Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt 97.1
2qlv_B252 Protein SIP2, protein SPM2; heterotrimer, ATP-bind 96.81
3vmn_A643 Dextranase; TIM barrel, immunoglobrin fold, greek- 96.04
3n9k_A399 Glucan 1,3-beta-glucosidase; aromatic entranceway/ 95.73
2f2h_A773 Putative family 31 glucosidase YICI; BETA8alpha8 b 95.71
3lpp_A898 Sucrase-isomaltase; glycoside hydrolase family 31, 95.71
1h4p_A408 Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca 95.66
1hjs_A332 Beta-1,4-galactanase; 4-galactanases, family 53 gl 95.3
3cc1_A433 BH1870 protein, putative alpha-N-acetylgalactosami 95.07
4ba0_A817 Alpha-glucosidase, putative, ADG31B; hydrolase; HE 94.97
2g3m_A693 Maltase, alpha-glucosidase; hydrolase, glycoside h 94.89
3nsx_A666 Alpha-glucosidase; structural genomics, PSI-2, pro 94.62
3l4y_A875 Maltase-glucoamylase, intestinal; glycoside hydrol 94.57
1ur4_A399 Galactanase; hydrolase, beta-1, glycoside hydrolas 94.49
1ece_A358 Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. 94.19
1vjz_A341 Endoglucanase; TM1752, structural genomics, JCSG, 93.86
3nco_A320 Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 93.81
3pzg_A383 Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 93.77
1fob_A334 Beta-1,4-galactanase; B/A barrel, glycosyl hydrola 93.73
2xvl_A1020 Alpha-xylosidase, putative, XYL31A; hydrolase, gly 93.32
2z0b_A131 GDE5, KIAA1434, putative glycerophosphodiester pho 92.79
1ceo_A343 Cellulase CELC; glycosyl hydrolase, family A/5 of 92.61
2osx_A481 Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel 92.25
3civ_A343 Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. 92.07
3k1d_A722 1,4-alpha-glucan-branching enzyme; mycobacterium t 91.93
3n12_A333 Chitinase A, chinctu2; zinc atoms, complex, hydrol 91.48
1kwg_A 645 Beta-galactosidase; TIM barrel, glycoside hydrolas 91.47
2whl_A294 Beta-mannanase, baman5; glycoside hydrolase, hydro 91.37
3tty_A 675 Beta-GAL, beta-galactosidase; TIM barrel, glycosid 91.37
2aam_A309 Hypothetical protein TM1410; structural genomics, 91.27
2zxd_A455 Alpha-L-fucosidase, putative; TIM barrel, hydrolas 91.19
1uas_A362 Alpha-galactosidase; TIM-barrel, beta-alpha-barrel 90.78
1egz_A291 Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL 90.76
3vup_A351 Beta-1,4-mannanase; TIM barrel, digestive fluid, H 90.54
1bqc_A302 Protein (beta-mannanase); glycosyl hydrolase, fami 90.32
4axn_A328 Chitinase C1; hydrolase; 1.68A {Serratia marcescen 90.29
3jug_A345 Beta-mannanase; TIM-barrel, glycosidase, hydrolase 90.19
3qho_A458 Endoglucanase, 458AA long hypothetical endo-1,4-be 89.98
3icg_A515 Endoglucanase D; cellulase, xylanase, carbohydrate 89.08
3eyp_A469 Putative alpha-L-fucosidase; structural genomics, 88.73
2p0o_A372 Hypothetical protein DUF871; structural genomics, 88.69
1ac0_A108 Glucoamylase; hydrolase, starch binding domain; HE 88.5
2wvv_A450 Alpha-L-fucosidase; alpha-L-fucose, hydrolase, gly 88.31
3pzt_A327 Endoglucanase; alpha/beta barrel, glycosyl hydrola 88.23
2y8k_A491 Arabinoxylanase, carbohydrate binding family 6; hy 87.93
3poh_A451 Endo-beta-N-acetylglucosaminidase F1; TIM barrel, 87.89
3aof_A317 Endoglucanase; glycosyl hydrolase family 5, cellul 87.26
4awe_A387 Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana 87.2
1wky_A464 Endo-beta-1,4-mannanase; TIM barrel, catalytic dom 87.09
2ki0_A36 DS119; beta-alpha-beta, de novo protein; NMR {Synt 86.96
3ndz_A345 Endoglucanase D; cellotriose, xylanase, carbohydra 86.96
2c0h_A353 Mannan endo-1,4-beta-mannosidase; hydrolase, signa 86.75
3top_A908 Maltase-glucoamylase, intestinal; membrane, hydrol 86.67
1jak_A512 Beta-N-acetylhexosaminidase; glycoside hydrolase, 86.08
4hty_A359 Cellulase; (alpha/beta)8 barrel, family 5 endogluc 86.01
1edg_A380 Endoglucanase A; family A, cellulases, xylanases, 85.81
1rh9_A373 Endo-beta-mannanase; endo-beta-mannase, retaining, 85.32
3ues_A478 Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydr 85.29
4do4_A400 Alpha-N-acetylgalactosaminidase; pharmacological c 84.89
3l55_A353 B-1,4-endoglucanase/cellulase; putative beta-1,4-e 84.84
1uuq_A440 Mannosyl-oligosaccharide glucosidase; hydrolase, m 84.39
3ayr_A376 Endoglucanase; TIM barrel, hydrolase, carbohydrate 83.96
3a5v_A397 Alpha-galactosidase; beta/alpha barrel, N-glycosyl 83.86
2jep_A395 Xyloglucanase; family 5, plant cell WALL, hydrolas 83.75
4f9d_A618 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylas; 83.55
3qr3_A340 Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A 83.48
1g01_A364 Endoglucanase; alpha/beta barrel, TIM barrel, hydr 83.45
3c8d_A403 Enterochelin esterase; alpha-beta-alpha sandwich, 83.21
1szn_A417 Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma 83.03
3ebv_A302 Chinitase A; chitinase A, CHIA, glycosidase, struc 82.72
1x7f_A385 Outer surface protein; structural genomics, unknow 81.94
2x2h_A 1027 Alpha-1,4-glucan lyase isozyme 1; anhydrofructose 81.91
1h1n_A305 Endo type cellulase ENGI; hydrolase, glycosyl hydr 81.84
7a3h_A303 Endoglucanase; hydrolase, cellulose degradation, g 81.63
3cz8_A319 Putative sporulation-specific glycosylase YDHD; st 81.27
3fnd_A312 Chitinase; TIM-barrel, structural genomics, PSI-2, 80.86
3ozo_A572 N-acetylglucosaminidase; beta-N-acetyl-D-hexosamin 80.66
1tvn_A293 Cellulase, endoglucanase G; glycoside hydrolase, C 80.6
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A Back     alignment and structure
Probab=100.00  E-value=4e-119  Score=1083.11  Aligned_cols=672  Identities=59%  Similarity=1.073  Sum_probs=601.8

Q ss_pred             CCCCcceecCCCCcchHHHHHHHHHHHHHHHHHHHhhcCchhhhhcccccCCcEEeCCcEEEEEeCCCcCeEEEEeecCC
Q 003230          146 GAGQNIYEIDPNLLGHRQHLDYRYGRYKQMCEDIDKYEGGLAAFSRGYEKFGFIRSDTGITYREWAPGAKSASLIGDFNN  225 (837)
Q Consensus       146 ~~~~~~~~~dp~l~~~~~~l~~r~~~~~~~~~~i~~~~g~l~~f~~~y~~lG~~~~~~gv~FrvWAP~A~~V~LvgDFN~  225 (837)
                      .++.+|+++||||+||+++|++|+..|.+.+++|.+.+|+|++|+++|++||+|+.++||+|+||||+|++|+|+||||+
T Consensus         8 ~~~~~~~~~~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~f~~~~~~lGa~~~~~gv~F~vwAP~A~~V~l~gdfn~   87 (755)
T 3aml_A            8 VDHLPIYDLDPKLEEFKDHFNYRIKRYLDQKCLIEKHEGGLEEFSKGYLKFGINTVDGATIYREWAPAAQEAQLIGEFNN   87 (755)
T ss_dssp             CSCCTHHHHCGGGGGGHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTGGGTSEEEEETTEEEEEEECTTCSEEEEEEGGGT
T ss_pred             cccCceeccCCcchhhHHHHHHHHHHHHHHHHHHHhcCCcHHHHhhhhhcCceEEeCCeEEEEEECCCCCEEEEEEecCC
Confidence            35579999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccccccCCCceEEEEeCCCCCCCCCCCCCCEEEEEEeCCCCc-cccCCccceecccCCCC--CCCCcEEeCCCccc
Q 003230          226 WNPNADIMTQNEFGVWEIFLPNNADGSPPIPHGSRVKIHMDTPSGI-KDSIPAWIKFSVQAPGE--IPYNGIYYDPPEEE  302 (837)
Q Consensus       226 w~~~~~~m~~~~~GvW~~~ip~~~~g~~~~~~g~~yk~~v~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~  302 (837)
                      |+...++|.+.+.|+|+++||+ .+|...+++|.+|+|+|.+++|. .+++|||++++.+++..  ..++++++||+..+
T Consensus        88 w~~~~~~m~~~~~GvW~~~v~~-~~g~~~i~~g~~Y~y~i~~~~g~~~~~~dpya~~~~~~~~~~~~~~~~~v~d~~~~~  166 (755)
T 3aml_A           88 WNGAKHKMEKDKFGIWSIKISH-VNGKPAIPHNSKVKFRFRHGGGAWVDRIPAWIRYATFDASKFGAPYDGVHWDPPACE  166 (755)
T ss_dssp             TCCTTCBCEECTTSEEEEEEEC-BTTBCSSCTTEEEEEEEECTTCCCEEECCTTCSCEEECCSSSSCCEEEEECCCCGGG
T ss_pred             CCCceeeceeCCCCEEEEEEcc-cccccCCCCCCEEEEEEECCCCcEEecCCcchheEeecccccCcccceEEECCcccc
Confidence            9988899999889999999995 34444578999999999987664 46789999998887763  34578999986556


Q ss_pred             cccccCCCCCCCCCceEEEeecCCCCCCCCCCCHHhhHhhhhhHHHHcCCCEEEEcCcccCCCCCCCCCccccccCCCCC
Q 003230          303 KYVFQHPQPKKPKSLRIYEAHVGMSSTEPIINTYANFRDDVLPRIKRLGYNAVQIMAVQEHSYYASFGYHVTNFFAPSSR  382 (837)
Q Consensus       303 ~~~~~~~~~~~~~~~~IYE~hv~~f~~~~~~Gt~~~~~~~~LdyLk~LGvt~I~LmPi~e~~~~~s~GY~v~~y~a~~~~  382 (837)
                      +|.|++.+++.+.+++|||+|||+|+.++++|||++|++++|||||+||||+||||||++++.+++|||+++|||+|+++
T Consensus       167 ~~~w~~~~~~~~~~~~IYE~hv~~~~~~~~~Gt~~~l~~~~L~yLk~LGvt~I~L~Pi~e~~~~~~~GY~~~dy~a~~~~  246 (755)
T 3aml_A          167 RYVFKHPRPPKPDAPRIYEAHVGMSGEEPEVSTYREFADNVLPRIRANNYNTVQLMAIMEHSYYASFGYHVTNFFAVSSR  246 (755)
T ss_dssp             CCCCCSCCCCCCSSCEEEEEESTTCSSSSSCCCHHHHHHHTHHHHHHTTCCEEEEESCEECSCGGGTTCSCSEEEEECGG
T ss_pred             cCCCCCcCCCCCCCCEEEEEeeeccccCCCCCCHHHHHHHHHHHHHHcCCCEEEECchhcCCCCCCCCCccCCCCccCCC
Confidence            79998877767789999999999999888899999999668999999999999999999999888999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHcCCEEEEeeccccccCCCcccccCCC---CCCCCccccCCCCCcccCCCCCCCCCCHHHHHHHH
Q 003230          383 CGTPDDLKSLIDKAHELGLLVLMDIVHSHASNNVLDGLNMFD---GTDGHYFHSGSRGYHWMWDSRLFNYGSWEVLRFLL  459 (837)
Q Consensus       383 ~Gt~edfk~LV~~aH~~GI~VIlDvV~NH~s~~~~~~~~~fd---g~~~~yf~~~~~g~~~~w~~~~ln~~~~eV~~~l~  459 (837)
                      |||++|||+||++||++||+||||+|+||++.++.+++..|+   ++.+.||+.+++++++.|++++||++||+|+++|+
T Consensus       247 ~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~g~~~fd~~~~~~~~yf~~~~~g~~~~w~~~~lN~~~p~V~~~l~  326 (755)
T 3aml_A          247 SGTPEDLKYLVDKAHSLGLRVLMDVVHSHASNNVTDGLNGYDVGQNTHESYFHTGDRGYHKLWDSRLFNYANWEVLRFLL  326 (755)
T ss_dssp             GCCHHHHHHHHHHHHHTTCEEEEEECCSCBCCCTTTSGGGGCSSCCGGGSSBCCGGGGEETTTTEECBCTTSHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHCCCEEEEEEeccccccccccchhccccCCCCCcceeecCCCCccCCCCCceeccCCHHHHHHHH
Confidence            999999999999999999999999999999999877888887   66677888777788999999999999999999999


Q ss_pred             HHHHHHHHHcCCCeEEEcccccccccccCccccccCCcccccCcccChhHHHHHHHHHHHhhccCCCeEEEEecCCCCCc
Q 003230          460 SNARWWLEEYKFDGFRFDGVTSMMYTHHGLQVAFTGNYSEYFGFATDVDAVVYLMLVNDMIHGLYPEAVSIGEDVSGMPT  539 (837)
Q Consensus       460 ~~l~~Wl~e~gvDGfR~D~v~~m~~~~~g~~~~f~~~~~~~~g~~~d~~~~~fl~~~~~~v~~~~P~~~~iaE~~~~~p~  539 (837)
                      ++++||++||||||||||+|++|++.++|++..|++.|.++++.+.+.++++||+++++.+++.+|++++|||.|+++|.
T Consensus       327 ~~l~~Wl~e~gvDGfR~Dav~~m~~~~~g~~~~f~~~~~~~~~~~~~~~ai~fl~~~~~~v~~~~p~~~lIaE~~~~~p~  406 (755)
T 3aml_A          327 SNLRYWMDEFMFDGFRFDGVTSMLYHHHGINKGFTGNYKEYFSLDTDVDAIVYMMLANHLMHKLLPEATIVAEDVSGMPV  406 (755)
T ss_dssp             HHHHHHHHHHCCCEEEETTHHHHHBTTTTTTCCCCSCGGGTSSTTBCHHHHHHHHHHHHHHHHHCTTCEEEECCSSCCTT
T ss_pred             HHHHHHHHHcCCCEEEecchhhhhhcccCcccccccccccccccccchhHHHHHHHHHHHHHHHCCCeEEEEEccCCCcc
Confidence            99999999999999999999999999899888888888888888899999999999999999999999999999999999


Q ss_pred             ceeccccCCcccchhhhhhHHHHHHHHHhhc-chhhhhhhhHHhhccCcccccceecccCcccccccccchhhhccChhH
Q 003230          540 FCIPVQDGGVGFDYRLQMAIADKWIELLKKR-DEDWKMGAIVHTMTNRRWLEKCVAYAESHDQALVGDKTIAFWLMDKDM  618 (837)
Q Consensus       540 ~~~~~~~gglgfD~~~~~~~~d~~~~~lk~~-~~~~~~~~l~~~l~~~~~~~~~v~ylenHD~~r~g~~~~~~~~~~~~~  618 (837)
                      +++++..+|+||||+++|.+++.|+++++.. +..|.+..+...+...++++++|+|++|||++|+|++++.+.+++..+
T Consensus       407 ~~~~~~~gglgFd~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~vnf~~nHD~~r~g~~~~~f~l~d~~~  486 (755)
T 3aml_A          407 LCRPVDEGGVGFDFRLAMAIPDRWIDYLKNKEDRKWSMSEIVQTLTNRRYTEKCIAYAESHDQSIVGDKTIAFLLMDKEM  486 (755)
T ss_dssp             TTSCGGGTSCCCSEEECTTHHHHHHHHHHHCCGGGCCHHHHHHHHHCSCTTSCEEECSCCCCTTSCCCBCHHHHHHTTHH
T ss_pred             ceeeccCCCccccccccccchHHHHHHHhhCCccccCHHHHHHHHHhccCchhheehhhcCCccccccccccccccchhh
Confidence            9999988999999999999999999999853 456777777777776567788999999999999999988888899999


Q ss_pred             HHhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCceEeecccccCCCCCCCCCCCCCCCCCCCcCCCCCCCCcccCcccc
Q 003230          619 YDFMALDRPSTPRIDRGIALHKMIRLVTMGLGGEAYLNFMGNEFGHPEWIDFPRGDQRLPNGQFVPGNNFSYDKCRRRFD  698 (837)
Q Consensus       619 ~~~~~~~~~~~~~~~~g~al~kla~~l~ltlpG~p~L~y~G~E~G~~e~~d~p~~~~~~~~~~~~~gn~~s~~~~r~~~~  698 (837)
                      |..|+.....++.++++.+++|++++++|++||+|+|+|||+|+|+++|.++|+           .+++++++.+|  ++
T Consensus       487 ~~~~~~l~~~~~~~~~~~~~~k~a~~~llt~pG~P~lly~G~E~G~~~~~~~p~-----------~g~~~~~~~~r--~~  553 (755)
T 3aml_A          487 YTGMSDLQPASPTINRGIALQKMIHFITMALGGDGYLNFMGNEFGHPEWIDFPR-----------EGNNWSYDKCR--RQ  553 (755)
T ss_dssp             HHSCBSSSCCCHHHHHHHHHHHHHHHHHHHHHCSEEEEETTGGGTCCSBCCCCC-----------GGGTTCCTTSS--CC
T ss_pred             hhhhhhccccchhhhhhHHHHHHHHHHHHHCCCCEEEEeCchhcCCcCcccCcc-----------cCCCCCccccc--CC
Confidence            998887666667777889999999999999999999999999999999988886           36777777666  56


Q ss_pred             CCccc--cccchHHHHHHHHHHHHHHHhcCCCCCcEEEEeecCCCcEEEEEcCcEEEEEECCCCCcccceEEcccCCccE
Q 003230          699 LGDAD--YLRYRGMQEFDRAMQHLEEKYGFMTSEHQYVSRKDEGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKY  776 (837)
Q Consensus       699 w~~~~--~~~~~~l~~f~r~Li~LR~~~~~L~~g~~~i~~~~~~~~Vlaf~R~~llvv~Nf~~~~~~~~~~l~~~~~g~~  776 (837)
                      |...+  ...++.|++|+|+|++||+++|+|..|.+|+.+.+.+++|+||.|..++||+||++.+++.+|+|++|.+|+|
T Consensus       554 W~~~~~~~~~~~~l~~~~r~Li~lRk~~paL~~G~~~~~~~~~~~~vlaf~R~~llVv~N~s~~~~~~~~~i~vp~~g~~  633 (755)
T 3aml_A          554 WSLVDTDHLRYKYMNAFDQAMNALEEEFSFLSSSKQIVSDMNEKDKVIVFERGDLVFVFNFHPNKTYKGYKVGCDLPGKY  633 (755)
T ss_dssp             HHHHHCTTBSHHHHHHHHHHHHHHHHHHCGGGCCCEEEEEEETTTTEEEEEETTEEEEEECCSSCCEEEEEEEESSCSEE
T ss_pred             cccccCccchhHHHHHHHHHHHHHHHhChhhcCCCEEEEeecCCCcEEEEEECCEEEEEECCCCCccceeEECCCCCCeE
Confidence            65433  2356899999999999999999999999888777778889999999999999999755678899999999999


Q ss_pred             EEEEeCCCCCcCCccccCCCcceecc--------ccccCCCCeEEEEEEcCceEEEEEEcCCc
Q 003230          777 KIVLDSDDPLFGGYKRLDHNAEYFSL--------EGWYDDQPHSFLVYAPSRTAVVYALADEE  831 (837)
Q Consensus       777 ~~vlnsd~~~~gG~~~~~~~~~~~~~--------~~~~~~~~~~l~l~Lp~~s~~Vl~~~~~~  831 (837)
                      +++||||+..|||+++++....+.+.        +.+++++++++.|+|||++++||+...+.
T Consensus       634 ~~vlnsd~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lPp~s~~vl~~~~~~  696 (755)
T 3aml_A          634 RVALDSDALVFGGHGRVGHDVDHFTSPEGMPGVPETNFNNRPNSFKVLSPPRTCVAYYRVDED  696 (755)
T ss_dssp             EEEEETTSGGGTSCCCSCTTCCEECEECSCTTCGGGSBTTBSEEEEEEECTTEEEEEEECCTT
T ss_pred             EEEEeCCccccCCccccCCccceecccccccccccccccCCCCeEEEEECCCEEEEEEEcCcc
Confidence            99999999999999887655445443        35788999999999999999999997643
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Back     alignment and structure
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* Back     alignment and structure
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* Back     alignment and structure
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} Back     alignment and structure
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A Back     alignment and structure
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12} Back     alignment and structure
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A Back     alignment and structure
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A Back     alignment and structure
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Back     alignment and structure
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A* Back     alignment and structure
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Back     alignment and structure
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} Back     alignment and structure
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* Back     alignment and structure
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A Back     alignment and structure
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae} Back     alignment and structure
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A* Back     alignment and structure
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A Back     alignment and structure
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} Back     alignment and structure
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus} Back     alignment and structure
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} Back     alignment and structure
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A Back     alignment and structure
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm} Back     alignment and structure
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A* Back     alignment and structure
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A* Back     alignment and structure
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A Back     alignment and structure
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A* Back     alignment and structure
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A* Back     alignment and structure
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A* Back     alignment and structure
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A Back     alignment and structure
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A Back     alignment and structure
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A* Back     alignment and structure
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A* Back     alignment and structure
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP} Back     alignment and structure
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} Back     alignment and structure
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A* Back     alignment and structure
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A* Back     alignment and structure
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ... Back     alignment and structure
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A Back     alignment and structure
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A* Back     alignment and structure
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 Back     alignment and structure
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* Back     alignment and structure
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A Back     alignment and structure
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A Back     alignment and structure
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A* Back     alignment and structure
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A Back     alignment and structure
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A* Back     alignment and structure
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A Back     alignment and structure
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A* Back     alignment and structure
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A Back     alignment and structure
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A* Back     alignment and structure
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* Back     alignment and structure
>1r7a_A Sucrose phosphorylase; beta-alpha-barrels, dimer, glycoside hydrolase, transferase; 1.77A {Bifidobacterium adolescentis} SCOP: b.71.1.1 c.1.8.1 PDB: 2gdv_A* 2gdu_A* Back     alignment and structure
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ... Back     alignment and structure
>1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>3hje_A 704AA long hypothetical glycosyltransferase; trehalose biosynthesis, maltooligoside trehalose synthase (M family 13 glycoside hydrolases; 1.90A {Sulfolobus tokodaii str} Back     alignment and structure
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A* Back     alignment and structure
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A* Back     alignment and structure
>3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A Back     alignment and structure
>3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A Back     alignment and structure
>3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A* Back     alignment and structure
>3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A* Back     alignment and structure
>1z0n_A 5'-AMP-activated protein kinase, beta-1 subunit; beta sandwich, sugar binding protein; HET: BCD; 1.49A {Rattus norvegicus} SCOP: b.1.18.21 PDB: 1z0m_A* 2f15_A Back     alignment and structure
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Back     alignment and structure
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Back     alignment and structure
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A* Back     alignment and structure
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* Back     alignment and structure
>1tz7_A 4-alpha-glucanotransferase; (beta, alpha)8- barrel; 2.15A {Aquifex aeolicus} SCOP: c.1.8.1 Back     alignment and structure
>1esw_A Amylomaltase; (beta,alpha)8-barrel, glucanotransferase, alpha-amylase FAMI acarbose, transferase; HET: ACR; 1.90A {Thermus aquaticus} SCOP: c.1.8.1 PDB: 1cwy_A* 1fp8_A 1fp9_A 2owc_A* 2oww_A* 2owx_A* 2x1i_A* Back     alignment and structure
>1x1n_A 4-alpha-glucanotransferase; disproportionating enzyme, amylomaltase, D-enzyme; 1.80A {Solanum tuberosum} SCOP: c.1.8.1 Back     alignment and structure
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Back     alignment and structure
>3hje_A 704AA long hypothetical glycosyltransferase; trehalose biosynthesis, maltooligoside trehalose synthase (M family 13 glycoside hydrolases; 1.90A {Sulfolobus tokodaii str} Back     alignment and structure
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana} Back     alignment and structure
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* Back     alignment and structure
>2qlv_B Protein SIP2, protein SPM2; heterotrimer, ATP-binding, carbohydrate metabolism, kinase, membrane, nucleotide-binding, nucleus; 2.60A {Saccharomyces cerevisiae} SCOP: b.1.18.21 d.353.1.1 Back     alignment and structure
>3vmn_A Dextranase; TIM barrel, immunoglobrin fold, greek-KEY-motif, glycoside H family 66, hydrolase; 1.60A {Streptococcus mutans} PDB: 3vmo_A* 3vmp_A* Back     alignment and structure
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A Back     alignment and structure
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A* Back     alignment and structure
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A* Back     alignment and structure
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 Back     alignment and structure
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* Back     alignment and structure
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} Back     alignment and structure
>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A* Back     alignment and structure
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A* Back     alignment and structure
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A* Back     alignment and structure
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A* Back     alignment and structure
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* Back     alignment and structure
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A Back     alignment and structure
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 Back     alignment and structure
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* Back     alignment and structure
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* Back     alignment and structure
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A Back     alignment and structure
>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A* Back     alignment and structure
>2z0b_A GDE5, KIAA1434, putative glycerophosphodiester phosphodiesterase; CBM20 domain, starch-binding, hydrolase, STR genomics, NPPSFA; 2.00A {Homo sapiens} Back     alignment and structure
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A Back     alignment and structure
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* Back     alignment and structure
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} Back     alignment and structure
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Back     alignment and structure
>3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* Back     alignment and structure
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Back     alignment and structure
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A Back     alignment and structure
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* Back     alignment and structure
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15 Back     alignment and structure
>2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A* Back     alignment and structure
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 Back     alignment and structure
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} Back     alignment and structure
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* Back     alignment and structure
>4axn_A Chitinase C1; hydrolase; 1.68A {Serratia marcescens} Back     alignment and structure
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} Back     alignment and structure
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* Back     alignment and structure
>3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis} Back     alignment and structure
>1ac0_A Glucoamylase; hydrolase, starch binding domain; HET: GLC BGC GLO; NMR {Aspergillus niger} SCOP: b.3.1.1 PDB: 1acz_A* 1kul_A 1kum_A Back     alignment and structure
>2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A* Back     alignment and structure
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A Back     alignment and structure
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} Back     alignment and structure
>3poh_A Endo-beta-N-acetylglucosaminidase F1; TIM barrel, structural genomics, joint center for structural genomics, JCSG; 1.55A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* Back     alignment and structure
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} Back     alignment and structure
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 Back     alignment and structure
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic} Back     alignment and structure
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* Back     alignment and structure
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 Back     alignment and structure
>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A* Back     alignment and structure
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A* Back     alignment and structure
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* Back     alignment and structure
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 Back     alignment and structure
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 Back     alignment and structure
>3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A* Back     alignment and structure
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A* Back     alignment and structure
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* Back     alignment and structure
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* Back     alignment and structure
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea} Back     alignment and structure
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* Back     alignment and structure
>4f9d_A Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylas; family 4 carbohydrate esterase, TIM barrel, hydrolase, deace carbohydrate/sugar binding; HET: MES; 1.90A {Escherichia coli} PDB: 4f9j_A* Back     alignment and structure
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} Back     alignment and structure
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* Back     alignment and structure
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* Back     alignment and structure
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* Back     alignment and structure
>3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor} Back     alignment and structure
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12 Back     alignment and structure
>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A* Back     alignment and structure
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A Back     alignment and structure
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A Back     alignment and structure
>3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp} Back     alignment and structure
>3fnd_A Chitinase; TIM-barrel, structural genomics, PSI-2, P structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides thetaiotaomicron} PDB: 3co4_A Back     alignment and structure
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A* Back     alignment and structure
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 837
d1m7xa3396 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enz 4e-50
d1eh9a3400 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrol 2e-30
d1bf2a3475 c.1.8.1 (A:163-637) Isoamylase, central domain {Ps 2e-28
d2bhua3420 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydro 2e-25
d1uoka2479 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus 4e-20
d1jaea2378 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mea 5e-19
d1m53a2478 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Kle 6e-19
d1g5aa2554 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysacc 1e-18
d1gcya2357 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan m 2e-18
d1iv8a2 653 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase 6e-18
d1iv8a2653 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase 3e-04
d1lwha2391 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Ther 4e-17
d1j0ha3382 c.1.8.1 (A:124-505) Neopullulanase, central domain 1e-16
d1gjwa2572 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga 1e-16
d1m7xa2106 b.71.1.1 (A:623-728) 1,4-alpha-glucan branching en 2e-16
d1ht6a2347 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hor 5e-16
d1ua7a2344 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillu 1e-15
d2d3na2394 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillu 4e-15
d1hx0a2403 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus s 5e-15
d1ud2a2390 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillu 9e-15
d1m7xa1110 b.1.18.2 (A:117-226) 1,4-alpha-glucan branching en 1e-14
d1hvxa2393 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillu 1e-14
d1g94a2354 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoa 1e-14
d1mxga2361 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeo 2e-14
d1wzaa2409 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Haloth 3e-14
d1e43a2393 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera 7e-14
d1h3ga3422 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central d 2e-12
d2fhfa5563 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella p 3e-11
d2fhfa5563 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella p 2e-05
d1wzla3382 c.1.8.1 (A:121-502) Maltogenic amylase, central do 7e-11
d1ji1a3432 c.1.8.1 (A:123-554) Maltogenic amylase, central do 2e-10
d1qhoa4407 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase 2e-10
d1ea9c3382 c.1.8.1 (C:122-503) Maltogenic amylase, central do 6e-10
d1r7aa2434 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobac 3e-09
d2guya2381 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergill 6e-09
d3bmva4406 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase 5e-08
d2aaaa2381 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergill 9e-08
d1eh9a190 b.1.18.2 (A:1-90) Glycosyltrehalose trehalohydrola 4e-07
d2fhfa1115 b.1.18.2 (A:288-402) Pullulanase PulA {Klebsiella 8e-07
d2bhua197 b.1.18.2 (A:14-110) Glycosyltrehalose trehalohydro 4e-06
d1bf2a1162 b.1.18.2 (A:1-162) Isoamylase, N-terminal domain N 1e-04
d2qlvb187 b.1.18.21 (B:161-247) SIP2 {Saccharomyces cerevisi 0.002
d1z0na187 b.1.18.21 (A:77-163) 5'-AMP-activated protein kina 0.004
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} Length = 396 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: 1,4-alpha-glucan branching enzyme, central domain
species: Escherichia coli [TaxId: 562]

 Score =  179 bits (454), Expect = 4e-50
 Identities = 100/417 (23%), Positives = 165/417 (39%), Gaps = 45/417 (10%)

Query: 307 QHPQPKKPKSLRIYEAHVGM---SSTEPIINTYANFRDDVLPRIKRLGYNAVQIMAVQEH 363
           +  Q   P S  IYE H+G     +      +Y    D ++P  K +G+  ++++ + EH
Sbjct: 9   KANQFDAPIS--IYEVHLGSWRRHTDNNFWLSYRELADQLVPYAKWMGFTHLELLPINEH 66

Query: 364 SYYASFGYHVTNFFAPSSRCGTPDDLKSLIDKAHELGLLVLMDIVHSHASNNVLDGLNMF 423
            +  S+GY  T  +AP+ R GT DD +  ID AH  GL V++D V  H   +    L  F
Sbjct: 67  PFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDD-FALAEF 125

Query: 424 DGTDGHYFHSGSRGYHWMWDSRLFNYGSWEVLRFLLSNARWWLEEYKFDGFRFDGVTSMM 483
           DGT+ +       GYH  W++ ++NYG  EV  FL+ NA +W+E +  D  R D V SM+
Sbjct: 126 DGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMI 185

Query: 484 YTHHGLQVAFTGNYSEYFGFATDVDAVVYLMLVNDMIHGLYPEAVSIGEDVSGMPTFCIP 543
           Y  +  +          FG   +++A+ +L   N ++      AV++ E+ +  P    P
Sbjct: 186 YRDYSRK--EGEWIPNEFGGRENLEAIEFLRNTNRILGEQVSGAVTMAEESTDFPGVSRP 243

Query: 544 VQDGGVGFDYRLQMAIADKWIELLKKRDEDWKMGAIVHTMTNRRWLEKCVAYAESHDQAL 603
              GG+GF Y+  +      ++ +K      +      T        +      SHD+ +
Sbjct: 244 QDMGGLGFWYKWNLGWMHDTLDYMKLDPVYRQYHHDKLTFGILYNYTENFVLPLSHDEVV 303

Query: 604 VGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLVTMGLGGEAYLNFMGNEFG 663
            G K+I   +       F               A  +          G+  L FMGNEF 
Sbjct: 304 HGKKSILDRMPGDAWQKF---------------ANLRAYYGWMWAFPGKKLL-FMGNEFA 347

Query: 664 HPEWIDFPRGDQRLPNGQFVPGNNFSYDKCRRRFDLGDADYLRYRGMQEFDRAMQHL 720
                +                           + L +     + G+Q   R +   
Sbjct: 348 QGREWN---------------------HDASLDWHLLEGGDNWHHGVQRLVRDLNLT 383
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Length = 400 Back     information, alignment and structure
>d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} Length = 475 Back     information, alignment and structure
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Length = 420 Back     information, alignment and structure
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} Length = 479 Back     information, alignment and structure
>d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} Length = 378 Back     information, alignment and structure
>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Length = 478 Back     information, alignment and structure
>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Length = 554 Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Length = 357 Back     information, alignment and structure
>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Length = 653 Back     information, alignment and structure
>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Length = 653 Back     information, alignment and structure
>d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} Length = 391 Back     information, alignment and structure
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Length = 382 Back     information, alignment and structure
>d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} Length = 572 Back     information, alignment and structure
>d1m7xa2 b.71.1.1 (A:623-728) 1,4-alpha-glucan branching enzyme {Escherichia coli [TaxId: 562]} Length = 106 Back     information, alignment and structure
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Length = 347 Back     information, alignment and structure
>d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} Length = 344 Back     information, alignment and structure
>d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} Length = 394 Back     information, alignment and structure
>d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} Length = 403 Back     information, alignment and structure
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} Length = 390 Back     information, alignment and structure
>d1m7xa1 b.1.18.2 (A:117-226) 1,4-alpha-glucan branching enzyme, N-terminal domain N {Escherichia coli [TaxId: 562]} Length = 110 Back     information, alignment and structure
>d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} Length = 393 Back     information, alignment and structure
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} Length = 354 Back     information, alignment and structure
>d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} Length = 361 Back     information, alignment and structure
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} Length = 409 Back     information, alignment and structure
>d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} Length = 393 Back     information, alignment and structure
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Length = 422 Back     information, alignment and structure
>d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Length = 563 Back     information, alignment and structure
>d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Length = 563 Back     information, alignment and structure
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Length = 382 Back     information, alignment and structure
>d1ji1a3 c.1.8.1 (A:123-554) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Length = 432 Back     information, alignment and structure
>d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} Length = 407 Back     information, alignment and structure
>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Length = 382 Back     information, alignment and structure
>d1r7aa2 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobacterium adolescentis [TaxId: 1680]} Length = 434 Back     information, alignment and structure
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} Length = 381 Back     information, alignment and structure
>d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Length = 406 Back     information, alignment and structure
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} Length = 381 Back     information, alignment and structure
>d1eh9a1 b.1.18.2 (A:1-90) Glycosyltrehalose trehalohydrolase, N-terminal domain N {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Length = 90 Back     information, alignment and structure
>d2fhfa1 b.1.18.2 (A:288-402) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Length = 115 Back     information, alignment and structure
>d2bhua1 b.1.18.2 (A:14-110) Glycosyltrehalose trehalohydrolase, N-terminal domain N {Deinococcus radiodurans [TaxId: 1299]} Length = 97 Back     information, alignment and structure
>d1bf2a1 b.1.18.2 (A:1-162) Isoamylase, N-terminal domain N {Pseudomonas amyloderamosa [TaxId: 32043]} Length = 162 Back     information, alignment and structure
>d2qlvb1 b.1.18.21 (B:161-247) SIP2 {Saccharomyces cerevisiae [TaxId: 4932]} Length = 87 Back     information, alignment and structure
>d1z0na1 b.1.18.21 (A:77-163) 5'-AMP-activated protein kinase subunit beta-1 {Rattus norvegicus [TaxId: 10116]} Length = 87 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query837
d1j0ha3382 Neopullulanase, central domain {Bacillus stearothe 100.0
d1m7xa3396 1,4-alpha-glucan branching enzyme, central domain 100.0
d2bhua3420 Glycosyltrehalose trehalohydrolase, central domain 100.0
d1wzla3382 Maltogenic amylase, central domain {Thermoactinomy 100.0
d1eh9a3400 Glycosyltrehalose trehalohydrolase, central domain 100.0
d1ea9c3382 Maltogenic amylase, central domain {Bacillus sp., 100.0
d1h3ga3422 Cyclomaltodextrinase, central domain {Flavobacteri 100.0
d1lwha2391 4-alpha-glucanotransferase {Thermotoga maritima [T 100.0
d2guya2381 Fungal alpha-amylases {Aspergillus oryzae, Taka-am 100.0
d1qhoa4407 Cyclodextrin glycosyltransferase {Bacillus stearot 100.0
d1wzaa2409 Bacterial alpha-amylase {Halothermothrix orenii [T 100.0
d3bmva4406 Cyclodextrin glycosyltransferase {Thermoanaerobact 100.0
d2aaaa2381 Fungal alpha-amylases {Aspergillus niger, acid amy 100.0
d1bf2a3475 Isoamylase, central domain {Pseudomonas amyloderam 100.0
d1m53a2478 Isomaltulose synthase PalI {Klebsiella sp., lx3 [T 100.0
d1uoka2479 Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 100.0
d1ji1a3432 Maltogenic amylase, central domain {Thermoactinomy 100.0
d2fhfa5563 Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 100.0
d1g5aa2554 Amylosucrase {Neisseria polysaccharea [TaxId: 489] 100.0
d1gcya2357 G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase 100.0
d2d3na2394 Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 100.0
d1ua7a2344 Bacterial alpha-amylase {Bacillus subtilis [TaxId: 100.0
d1e43a2393 Bacterial alpha-amylase {Chimera (Bacillus amyloli 100.0
d1ht6a2347 Plant alpha-amylase {Barley (Hordeum vulgare), AMY 100.0
d1hvxa2393 Bacterial alpha-amylase {Bacillus stearothermophil 100.0
d1g94a2354 Bacterial alpha-amylase {Pseudoalteromonas halopla 100.0
d1gjwa2572 Maltosyltransferase {Thermotoga maritima [TaxId: 2 100.0
d1jaea2378 Animal alpha-amylase {Yellow mealworm (Tenebrio mo 100.0
d1mxga2361 Bacterial alpha-amylase {Archaeon Pyrococcus woese 100.0
d1ud2a2390 Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta 100.0
d1r7aa2434 Sucrose phosphorylase {Bifidobacterium adolescenti 100.0
d1hx0a2403 Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 100.0
d1iv8a2 653 Maltooligosyl trehalose synthase {Archaeon Sulfolo 99.94
d1m7xa1110 1,4-alpha-glucan branching enzyme, N-terminal doma 99.81
d1m7xa2106 1,4-alpha-glucan branching enzyme {Escherichia col 99.76
d1eh9a190 Glycosyltrehalose trehalohydrolase, N-terminal dom 99.48
d2bhua197 Glycosyltrehalose trehalohydrolase, N-terminal dom 99.38
d2fhfa1115 Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 99.29
d1bf2a1162 Isoamylase, N-terminal domain N {Pseudomonas amylo 99.02
d1tz7a1485 Amylomaltase MalQ {Aquifex aeolicus [TaxId: 63363] 98.26
d1eswa_500 Amylomaltase MalQ {Thermus aquaticus [TaxId: 271]} 98.05
d1x1na1523 Amylomaltase MalQ {Potato (Solanum tuberosum) [Tax 98.03
d2qlvb187 SIP2 {Saccharomyces cerevisiae [TaxId: 4932]} 97.91
d1wzla283 Maltogenic amylase {Thermoactinomyces vulgaris, TV 97.73
d1zy9a2348 Alpha-galactosidase GalA catalytic domain {Thermot 97.65
d1j0ha283 Neopullulanase {Bacillus stearothermophilus [TaxId 97.64
d1z0na187 5'-AMP-activated protein kinase subunit beta-1 {Ra 97.59
d1ji1a283 Maltogenic amylase {Thermoactinomyces vulgaris, TV 97.56
d1ea9c280 Maltogenic amylase {Bacillus sp., cyclomaltodextri 97.45
d1uoka179 Oligo-1,6-glucosidase {Bacillus cereus [TaxId: 139 97.02
d1m53a178 Isomaltulose synthase PalI {Klebsiella sp., lx3 [T 96.97
d2f2ha4338 Putative glucosidase YicI, domain 2 {Escherichia c 96.67
d2pb1a1394 Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) 96.52
d1ecea_358 Endocellulase E1 {Acidothermus cellulolyticus [Tax 96.23
d1ceoa_340 Endoglucanase CelC {Clostridium thermocellum [TaxI 96.19
d1g5aa174 Amylosucrase {Neisseria polysaccharea [TaxId: 489] 96.13
d1rh9a1370 Beta-mannanase {Tomato (Lycopersicon esculentum) [ 96.09
d1qnra_344 Beta-mannanase {Trichoderma reesei [TaxId: 51453]} 96.07
d1ur4a_387 Beta-1,4-galactanase {Bacillus licheniformis [TaxI 96.01
d1h4pa_408 Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom 95.72
d1foba_334 Beta-1,4-galactanase {Fungus (Aspergillus aculeatu 95.26
d1hjsa_332 Beta-1,4-galactanase {Thielavia heterothallica, ak 95.24
d1g94a194 Bacterial alpha-Amylase {Pseudoalteromonas halopla 94.86
d1uuqa_410 Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} 94.49
d1wzaa179 Bacterial alpha-Amylase {Halothermothrix orenii [T 94.36
d1ua7a178 Bacterial alpha-Amylase {Bacillus subtilis [TaxId: 94.32
d1vjza_325 Endoglucanase homologue TM1752 {Thermotoga maritim 94.32
d1bf2a2113 Isoamylase {Pseudomonas amyloderamosa [TaxId: 3204 94.21
d2c0ha1350 endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed 94.06
d3bmva389 Cyclodextrin glycosyltransferase {Thermoanaerobact 93.48
d2aama1285 Hypothetical protein TM1410 {Thermotoga maritima [ 93.16
d1cyga389 Cyclodextrin glycosyltransferase {Bacillus stearot 93.08
d1wkya2297 Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 93.06
d1edta_265 Endo-beta-N-acetylglucosaminidase {Streptomyces pl 92.96
d1cxla390 Cyclodextrin glycosyltransferase {Bacillus circula 92.17
d1hl9a2350 Putative alpha-L-fucosidase, catalytic domain {The 92.04
d1kwga2393 A4 beta-galactosidase {Thermus thermophilus [TaxId 91.69
d1tvna1293 Endoglucanase Cel5a {Pseudoalteromonas haloplankti 91.62
d1nowa1353 beta-hexosaminidase B {Human (Homo sapiens) [TaxId 91.34
d1jaea193 Animal alpha-amylase {Yellow mealworm (Tenebrio mo 91.25
d1edga_380 Endoglucanase CelA {Clostridium cellulolyticum [Ta 91.19
d1x7fa2244 Outer surface protein, N-terminal domain {Bacillus 90.21
d2ebna_285 Endo-beta-N-acetylglucosaminidase {Flavobacterium 89.65
d1bqca_302 Beta-mannanase {Thermomonospora fusca [TaxId: 2021 89.38
d1jaka1356 beta-N-acetylhexosaminidase {Streptomyces plicatus 88.23
d1hx0a193 Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 88.12
d1r46a2292 Melibiase {Human (Homo sapiens) [TaxId: 9606]} 88.1
d1uasa2273 Melibiase {Rice (Oryza sativa) [TaxId: 4530]} 87.93
d2gjxa1362 beta-hexosaminidase A {Human (Homo sapiens) [TaxId 87.67
d1h1na_305 Endocellulase EngI {Thermoascus aurantiacus [TaxId 86.64
d1g01a_357 Alkaline cellulase K catalytic domain {Bacillus sp 85.94
d1egza_291 Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 85.33
d7a3ha_300 Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId 85.17
d1szna2314 Melibiase {Trichoderma reesei [TaxId: 51453]} 85.09
d2fhfa5563 Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 84.1
d1qbaa3443 Bacterial chitobiase (beta-N-acetylhexosaminidase) 83.3
d1h3ga283 Cyclomaltodextrinase {Flavobacterium sp. 92 [TaxId 83.12
d1tg7a5354 Beta-galactosidase LacA, N-terminal domain {Penici 80.53
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Neopullulanase, central domain
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=100.00  E-value=5.9e-55  Score=484.90  Aligned_cols=335  Identities=19%  Similarity=0.313  Sum_probs=249.9

Q ss_pred             CCCCCceEEEeecCCCCCCC---------------------CCCCHHhhHhhhhhHHHHcCCCEEEEcCcccCCCCCCCC
Q 003230          312 KKPKSLRIYEAHVGMSSTEP---------------------IINTYANFRDDVLPRIKRLGYNAVQIMAVQEHSYYASFG  370 (837)
Q Consensus       312 ~~~~~~~IYE~hv~~f~~~~---------------------~~Gt~~~~~~~~LdyLk~LGvt~I~LmPi~e~~~~~s~G  370 (837)
                      .+.++++|||+||+.|+...                     ..|||++++ ++|||||+||||+||||||++++.  +||
T Consensus         7 ~w~~~~viY~v~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~gi~-~kldyl~~LGv~~i~L~Pi~~~~~--~~g   83 (382)
T d1j0ha3           7 DWVKDTVWYQIFPERFANGNPSISPEGSRPWGSEDPTPTSFFGGDLQGII-DHLDYLVDLGITGIYLTPIFRSPS--NHK   83 (382)
T ss_dssp             GGGGGCCEEEECGGGTCCSCGGGSCTTCCCTTSSCCCSSCCCCCCHHHHH-HTHHHHHHHTCCEEEECCCEECSS--SSC
T ss_pred             cchhCCEEEEEEcchhcCCCCCCCccccccccccCCccCccCCcCHHHHH-HhHHHHHHcCCCEEEeCCCCcCCc--ccC
Confidence            33478999999999987431                     128999999 699999999999999999999875  799


Q ss_pred             CccccccCCCCCCCCHHHHHHHHHHHHHcCCEEEEeeccccccCCCcccccC----CCCCCCCccccC-------CCCC-
Q 003230          371 YHVTNFFAPSSRCGTPDDLKSLIDKAHELGLLVLMDIVHSHASNNVLDGLNM----FDGTDGHYFHSG-------SRGY-  438 (837)
Q Consensus       371 Y~v~~y~a~~~~~Gt~edfk~LV~~aH~~GI~VIlDvV~NH~s~~~~~~~~~----fdg~~~~yf~~~-------~~g~-  438 (837)
                      |++.|||+|+++|||+++||+||++||++||+||||+|+||++.++.+....    -....+.||...       .... 
T Consensus        84 y~~~d~~~vd~~~Gt~~~~~~lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (382)
T d1j0ha3          84 YDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVFNHCGYEFAPFQDVWKNGESSKYKDWFHIHEFPLQTEPRPNY  163 (382)
T ss_dssp             CSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTCHHHHHHHHHGGGCTTGGGBCBSSSSCCCSSSCSB
T ss_pred             CCcccccccCCCCCCHHHHHHHHHHhhhccceEEEEeeecccccccccchhhhccCCccccCCccccccccccccccccc
Confidence            9999999999999999999999999999999999999999999987432110    000111122211       1111 


Q ss_pred             ---cccCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccccccccccCccccccCCcccccCcccChhHHHHHHH
Q 003230          439 ---HWMWDSRLFNYGSWEVLRFLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLQVAFTGNYSEYFGFATDVDAVVYLML  515 (837)
Q Consensus       439 ---~~~w~~~~ln~~~~eV~~~l~~~l~~Wl~e~gvDGfR~D~v~~m~~~~~g~~~~f~~~~~~~~g~~~d~~~~~fl~~  515 (837)
                         ....+.++||+.||+||++|++++++|+++|||||||||++++|.                          .+++++
T Consensus       164 ~~~~~~~~~~dln~~n~~vr~~l~~~~~~wi~~~giDGfR~Da~~~~~--------------------------~~~~~~  217 (382)
T d1j0ha3         164 DTFAFVPQMPKLNTANPEVKRYLLDVATYWIREFDIDGWRLDVANEID--------------------------HEFWRE  217 (382)
T ss_dssp             CBSTTCTTSBBBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTGGGSC--------------------------HHHHHH
T ss_pred             cccccCCCCcccccChHHHHHHHHHHHHhHhhhccccEEEecchhhcc--------------------------hhhhhh
Confidence               112345899999999999999999999999999999999999873                          347889


Q ss_pred             HHHHhhccCCCeEEEEecCCCCCcceeccccCCcccchhhhhhHHHHHHHHHhhcchhh-h-hhhhHHhhc--cCccccc
Q 003230          516 VNDMIHGLYPEAVSIGEDVSGMPTFCIPVQDGGVGFDYRLQMAIADKWIELLKKRDEDW-K-MGAIVHTMT--NRRWLEK  591 (837)
Q Consensus       516 ~~~~v~~~~P~~~~iaE~~~~~p~~~~~~~~gglgfD~~~~~~~~d~~~~~lk~~~~~~-~-~~~l~~~l~--~~~~~~~  591 (837)
                      +...+++..|+++++||.|.......     .+.+|+..++..+.+..+.++......- . .......+.  .......
T Consensus       218 ~~~~~~~~~p~~~~i~e~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (382)
T d1j0ha3         218 FRQEVKALKPDVYILGEIWHDAMPWL-----RGDQFDAVMNYPFTDGVLRFFAKEEISARQFANQMMHVLHSYPNNVNEA  292 (382)
T ss_dssp             HHHHHHHHCTTCEEEECCSSCCGGGC-----SSSSCSEEBCHHHHHHHHHHHTSCCSCHHHHHHHHHHHHHTSCHHHHHT
T ss_pred             hhhhhhccCCCccccccccccchhhh-----cccccccccccccchhhhhhhhcccccchhhhhhhhhcccccccccCcc
Confidence            99999999999999999986543322     2345666666666666666665421100 0 011111111  1122345


Q ss_pred             ceecccCcccccccccchhhhccChhHHHhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCceEeecccccCCCCCCCCC
Q 003230          592 CVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLVTMGLGGEAYLNFMGNEFGHPEWIDFP  671 (837)
Q Consensus       592 ~v~ylenHD~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~al~kla~~l~ltlpG~p~L~y~G~E~G~~e~~d~p  671 (837)
                      .++|++|||+.|+...      ++                  ...++.|++.+++|++||+|+| |||+|+|+.+..+  
T Consensus       293 ~~~f~~nHD~~R~~~~------~~------------------~~~~~~~~a~~lllt~pG~P~i-y~G~E~G~~~~~~--  345 (382)
T d1j0ha3         293 AFNLLGSHDTSRILTV------CG------------------GDIRKVKLLFLFQLTFTGSPCI-YYGDEIGMTGGND--  345 (382)
T ss_dssp             CBCBSCCTTSCCHHHH------TT------------------TCHHHHHHHHHHHHHSSSCCEE-ETTGGGTCCCCST--
T ss_pred             ceeeccCCCCCccccc------cC------------------ChHHHHHHHHHHHHHcCCCCEE-EcChhhCcCCCCC--
Confidence            6899999999887532      11                  1145778899999999999877 9999999975422  


Q ss_pred             CCCCCCCCCCcCCCCCCCCcccCccccCCccccccchHHHHHHHHHHHHHHHhcCCC
Q 003230          672 RGDQRLPNGQFVPGNNFSYDKCRRRFDLGDADYLRYRGMQEFDRAMQHLEEKYGFMT  728 (837)
Q Consensus       672 ~~~~~~~~~~~~~gn~~s~~~~r~~~~w~~~~~~~~~~l~~f~r~Li~LR~~~~~L~  728 (837)
                                         ..+|++|+|...+  ..+.+++|+|+|++||+++|+|+
T Consensus       346 -------------------~~~r~~~~W~~~~--~~~~l~~~~k~L~~lR~~~paL~  381 (382)
T d1j0ha3         346 -------------------PECRKCMVWDPMQ--QNKELHQHVKQLIALRKQYRSLR  381 (382)
T ss_dssp             -------------------TGGGCCCCCCTTT--SCHHHHHHHHHHHHHHHHCHHHH
T ss_pred             -------------------cccccCCCCCccc--cChHHHHHHHHHHHHHhcCHHhC
Confidence                               2467889998765  56799999999999999999875
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Back     information, alignment and structure
>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} Back     information, alignment and structure
>d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} Back     information, alignment and structure
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} Back     information, alignment and structure
>d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Back     information, alignment and structure
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} Back     information, alignment and structure
>d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} Back     information, alignment and structure
>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Back     information, alignment and structure
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1ji1a3 c.1.8.1 (A:123-554) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Back     information, alignment and structure
>d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Back     information, alignment and structure
>d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} Back     information, alignment and structure
>d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} Back     information, alignment and structure
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Back     information, alignment and structure
>d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} Back     information, alignment and structure
>d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} Back     information, alignment and structure
>d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} Back     information, alignment and structure
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} Back     information, alignment and structure
>d1r7aa2 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobacterium adolescentis [TaxId: 1680]} Back     information, alignment and structure
>d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Back     information, alignment and structure
>d1m7xa1 b.1.18.2 (A:117-226) 1,4-alpha-glucan branching enzyme, N-terminal domain N {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1m7xa2 b.71.1.1 (A:623-728) 1,4-alpha-glucan branching enzyme {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1eh9a1 b.1.18.2 (A:1-90) Glycosyltrehalose trehalohydrolase, N-terminal domain N {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Back     information, alignment and structure
>d2bhua1 b.1.18.2 (A:14-110) Glycosyltrehalose trehalohydrolase, N-terminal domain N {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d2fhfa1 b.1.18.2 (A:288-402) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1bf2a1 b.1.18.2 (A:1-162) Isoamylase, N-terminal domain N {Pseudomonas amyloderamosa [TaxId: 32043]} Back     information, alignment and structure
>d1tz7a1 c.1.8.1 (A:1-485) Amylomaltase MalQ {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1eswa_ c.1.8.1 (A:) Amylomaltase MalQ {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d1x1na1 c.1.8.1 (A:2-524) Amylomaltase MalQ {Potato (Solanum tuberosum) [TaxId: 4113]} Back     information, alignment and structure
>d2qlvb1 b.1.18.21 (B:161-247) SIP2 {Saccharomyces cerevisiae [TaxId: 4932]} Back     information, alignment and structure
>d1wzla2 b.71.1.1 (A:503-585) Maltogenic amylase {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1j0ha2 b.71.1.1 (A:506-588) Neopullulanase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1z0na1 b.1.18.21 (A:77-163) 5'-AMP-activated protein kinase subunit beta-1 {Rattus norvegicus [TaxId: 10116]} Back     information, alignment and structure
>d1ji1a2 b.71.1.1 (A:555-637) Maltogenic amylase {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Back     information, alignment and structure
>d1ea9c2 b.71.1.1 (C:504-583) Maltogenic amylase {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d1uoka1 b.71.1.1 (A:480-558) Oligo-1,6-glucosidase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1m53a1 b.71.1.1 (A:521-598) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Back     information, alignment and structure
>d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Back     information, alignment and structure
>d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1g5aa1 b.71.1.1 (A:555-628) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Back     information, alignment and structure
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Back     information, alignment and structure
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} Back     information, alignment and structure
>d1g94a1 b.71.1.1 (A:355-448) Bacterial alpha-Amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} Back     information, alignment and structure
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Back     information, alignment and structure
>d1wzaa1 b.71.1.1 (A:437-515) Bacterial alpha-Amylase {Halothermothrix orenii [TaxId: 31909]} Back     information, alignment and structure
>d1ua7a1 b.71.1.1 (A:348-425) Bacterial alpha-Amylase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1bf2a2 b.71.1.1 (A:638-750) Isoamylase {Pseudomonas amyloderamosa [TaxId: 32043]} Back     information, alignment and structure
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Back     information, alignment and structure
>d3bmva3 b.71.1.1 (A:407-495) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Back     information, alignment and structure
>d2aama1 c.1.8.15 (A:28-312) Hypothetical protein TM1410 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1cyga3 b.71.1.1 (A:403-491) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Back     information, alignment and structure
>d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} Back     information, alignment and structure
>d1cxla3 b.71.1.1 (A:407-496) Cyclodextrin glycosyltransferase {Bacillus circulans, different strains [TaxId: 1397]} Back     information, alignment and structure
>d1hl9a2 c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} Back     information, alignment and structure
>d1nowa1 c.1.8.6 (A:200-552) beta-hexosaminidase B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jaea1 b.71.1.1 (A:379-471) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} Back     information, alignment and structure
>d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1x7fa2 c.1.8.12 (A:1-244) Outer surface protein, N-terminal domain {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} Back     information, alignment and structure
>d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d1jaka1 c.1.8.6 (A:151-506) beta-N-acetylhexosaminidase {Streptomyces plicatus [TaxId: 1922]} Back     information, alignment and structure
>d1hx0a1 b.71.1.1 (A:404-496) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Back     information, alignment and structure
>d2gjxa1 c.1.8.6 (A:167-528) beta-hexosaminidase A {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} Back     information, alignment and structure
>d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} Back     information, alignment and structure
>d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} Back     information, alignment and structure
>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1qbaa3 c.1.8.6 (A:338-780) Bacterial chitobiase (beta-N-acetylhexosaminidase) {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1h3ga2 b.71.1.1 (A:518-600) Cyclomaltodextrinase {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} Back     information, alignment and structure