Citrus Sinensis ID: 003270


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-----
MLVRGLQFRVLVRYFAIILRGIVVVMGTPLMLLVEMTVEMIMVLQKQKIWKSGWILQMTYCIWQWRAASAHEDFWRCLNFENRKISVEQFEDVCQRYPNATEVNIYGAPAIHLLVMKAVSLLRNLEALTLGRGQLGDAFFHALADCSMLKSLNVNDATLGNGVQEIPINHDQLRRLEITKCRVMRVSIRCPQLEHLSLKRSNMAQAVLNCPLLHLLDIASCHKLSDAAIRLAATSCPQLESLDMSNCSCVSDESLREIALSCANLRILNSSYCPNISLESVRLPMLTVLQLHSCEGITSASMAAISHSYMLEVLELDNCNLLTSVSLELPRLQNIRLVHCRKFADLNLRAMMLSSIMVSNCAALHRINITSNSLQKLSLQKQENLTSLALQCQCLQEVDLTDCESLTNSVCEVFSDGGGCPMLKSLVLDNCEGLTVVRFCSTSLVSLSLVGCRAITALELKCPILEKVCLDGCDHIESASFVPVALQSLNLGICPKLSTLGIEALHMVVLELKGCGVLSDAYINCPLLTSLDASFCSQLKDDCLSATTTSCPLIESLILMSCQSIGPDGLYSLRSLQNLTMLDLSYTFLTNLEPVFESCLQLKVLKLQACKYLTNTSLESLYKKGSLPALQELDLSYGTLCQSAIEELLAYCTHLTHVSLNGCGNMHDLNWGASGCQPFESPSVYNSCGIFPHENIHESIDQPNRLLQNLNCVGCPNIRKVFIPPQARCFHLSSLNLSLSANLKEVDVACFNLCFLNLSNCCSLETLKLDCPKLTSLFLQSCNIDEEGVESAITQCGMLETLDVRFCPKICSTSMGRLRAACPSLKRIFSSLTTS
cccccccHHHHHHHHHEEEccEEEEEcccHHHHcccHHHHHHHccccccccEEEEEEEcccHHHHHHHHHccccccEEEcccccccHHHHHHHHcccccccEEEccccccccHHHHHHHHccccccEEEcccccccHHHHHHccccccccEEEcccccccccHHHHccccccccEEEEccccccccccccccccEECcccccHHHHHcccccccEEEEcccccccHHHHHHHHHccccccEEEECccccccHHHHHHHHHccccccEEEccccccccccccccccccEEccccccccccHHHHHccccccccEEEccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccEEEccccccccHHHHHHHHcccccccccEEEECccccccccccccccccEEEccccccccHHHHccccccEEEccccccccccccccccccEECccccccccccccccccccEEEEcccccccccccccccccEEEccccccccHHHHHHHHcccccccEEEccccccccHHHHHHccccccccEEEcccccccccHHHHHccccccEEEEcccccccHHHHHHHHcccccccccEEEEEcccccHHHHHHHHHccccccEEEECcccccccccccccccccccccccccccccccccHHHHHHHcccccccEEEccccccccccccccccccccccEEcccccccccccccccccccEECccccccHHHHccccccccEEEEccccccHHHHHHHHHccccccEEECcccccccHHHHHHHHHccccccEEEEccccc
**VRGLQFRVLVRYFAIILRGIVVVMGTPLMLLVEMTVEMIMVLQKQKIWKSGWILQMTYCIWQWRAASAHEDFWRCLNFENRKISVEQFEDVCQRYPNATEVNIYGAPAIHLLVMKAVSLLRNLEALTLGRGQLGDAFFHALADCSMLKSLNVNDATLGNGVQEIPINHDQLRRLEITKCRVMRVSIRCPQLEHLSLKRSNMAQAVLNCPLLHLLDIASCHKLSDAAIRLAATSCPQLESLDMSNCSCVSDESLREIALSCANLRILNSSYCPNISLESVRLPMLTVLQLHSCEGITSASMAAISHSYMLEVLELDNCNLLTSVSLELPRLQNIRLVHCRKFADLNLRAMMLSSIMVSNCAALHRINITSNSLQKLSLQKQENLTSLALQCQCLQEVDLTDCESLTNSVCEVFSDGGGCPMLKSLVLDNCEGLTVVRFCSTSLVSLSLVGCRAITALELKCPILEKVCLDGCDHIESASFVPVALQSLNLGICPKLSTLGIEALHMVVLELKGCGVLSDAYINCPLLTSLDASFCSQLKDDCLSATTTSCPLIESLILMSCQSIGPDGLYSLRSLQNLTMLDLSYTFLTNLEPVFESCLQLKVLKLQACKYLTNTSLESLYKKGSLPALQELDLSYGTLCQSAIEELLAYCTHLTHVSLNGCGNMHDLNWGASGCQPFESPSVYNSCGIFPHENIHESIDQPNRLLQNLNCVGCPNIRKVFIPPQARCFHLSSLNLSLSANLKEVDVACFNLCFLNLSNCCSLETLKLDCPKLTSLFLQSCNIDEEGVESAITQCGMLETLDVRFCPKICSTSMGRLRAACPSLKRIFSSLT**
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MLVRGLQFRVLVRYFAIILRGIVVVMGTPLMLLVEMTVEMIMVLQKQKIWKSGWILQMTYCIWQWRAASAHEDFWRCLNFENRKISVEQFEDVCQRYPNATEVNIYGAPAIHLLVMKAVSLLRNLEALTLGRGQLGDAFFHALADCSMLKSLNVNDATLGNGVQEIPINHDQLRRLEITKCRVMRVSIRCPQLEHLSLKRSNMAQAVLNCPLLHLLDIASCHKLSDAAIRLAATSCPQLESLDMSNCSCVSDESLREIALSCANLRILNSSYCPNISLESVRLPMLTVLQLHSCEGITSASMAAISHSYMLEVLELDNCNLLTSVSLELPRLQNIRLVHCRKFADLNLRAMMLSSIMVSNCAALHRINITSNSLQKLSLQKQENLTSLALQCQCLQEVDLTDCESLTNSVCEVFSDGGGCPMLKSLVLDNCEGLTVVRFCSTSLVSLSLVGCRAITALELKCPILEKVCLDGCDHIESASFVPVALQSLNLGICPKLSTLGIEALHMVVLELKGCGVLSDAYINCPLLTSLDASFCSQLKDDCLSATTTSCPLIESLILMSCQSIGPDGLYSLRSLQNLTMLDLSYTFLTNLEPVFESCLQLKVLKLQACKYLTNTSLESLYKKGSLPALQELDLSYGTLCQSAIEELLAYCTHLTHVSLNGCGNMHDLNWGASGCQPFESPSVYNSCGIFPHENIHESIDQPNRLLQNLNCVGCPNIRKVFIPPQARCFHLSSLNLSLSANLKEVDVACFNLCFLNLSNCCSLETLKLDCPKLTSLFLQSCNIDEEGVESAITQCGMLETLDVRFCPKICSTSMGRLRAACPSLKRIFSSLTTS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
F-box/LRR-repeat protein 15 probableQ9SMY8

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3E4G, chain A
Confidence level:very confident
Coverage over the Query: 706-746,763-826
View the alignment between query and template
View the model in PyMOL
Template: 3E4G, chain A
Confidence level:very confident
Coverage over the Query: 518-616
View the alignment between query and template
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Template: 3BZ5, chain A
Confidence level:very confident
Coverage over the Query: 97-252,276-326,337-371,393-452,463-474,486-536
View the alignment between query and template
View the model in PyMOL
Template: 1O6V, chain A
Confidence level:very confident
Coverage over the Query: 505-664
View the alignment between query and template
View the model in PyMOL
Template: 3RGZ, chain A
Confidence level:very confident
Coverage over the Query: 62-432,475-813
View the alignment between query and template
View the model in PyMOL
Template: 2P1M, chain B
Confidence level:very confident
Coverage over the Query: 46-187,200-275,290-327,357-436,471-664
View the alignment between query and template
View the model in PyMOL
Template: 3FXI, chain A
Confidence level:probable
Coverage over the Query: 235-664
View the alignment between query and template
View the model in PyMOL