Citrus Sinensis ID: 003349

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------83
MLLLIRQWAPLFLKVSGVGGDSSERASKVQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPWRQHSKL
cEEEccccccccccccccHHHHHHHHHHHHcccccccccccccccccccEEEEEEEcccccccccccEEEEEEEEEccEEEEEEEcccccEEEEEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccccHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcccccccccHHHHcHHHHHHHHcccccccHHHHHHHHHHHHHHHccccccccEEEEEcccccccccHHHHHHHHHcccEEEEEccccccccccccccccccccccHHHHHHHHHcccccccEEEEccccccccccccHHHHHHHccccccccccccccccccccccccEEEEEccccccccccccccCEEEEcccccHHHHHHHHHHHccHHHHHHcccccccccccHHHHHHHHHHcHHHcccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHccccccccccccccccccccEEEcHHHHHHccccccccccHHHHHcccccEEEEcccccccccEEEEEEEECcccccEEECccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEcccccccccccHHHHHHHHHHHHHHccccccccccccccEEccccccccccHHHHHHHHHHccccEEEEccccccccHHcHHHHHHccEEEEcccHHHHHHHHHcccccccccccc
MLLLIRQWAPLFLKVSGVGGDS******************EVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKI**************FLLRQQMRAIK***************LER*MQ**GM*SNIWKHVQKE**************TSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQE**************************************STHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPW******
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MLLLIRQWAPLFLKVSGVGGDSSERASKVQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAxxxxxxxxxxxxxxxxxxxxxMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGxxxxxxxxxxxxxxxxxxxxxQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPWRQHSKL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Lon protease homolog 2, peroxisomal ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix (By similarity). Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import.confidentO64948
Lon protease homolog 2, peroxisomal ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import.confidentQ0J032
Lon protease homolog 2, peroxisomal ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import.probableB8BDV1

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.4.-.-Acting on peptide bonds (peptide hydrolases).probable
3.4.21.-Serine endopeptidases.probable
3.4.21.53Endopeptidase La.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3M6A, chain A
Confidence level:very confident
Coverage over the Query: 238-375,396-555,605-817
View the alignment between query and template
View the model in PyMOL
Template: 1R6B, chain X
Confidence level:very confident
Coverage over the Query: 245-546,568-589
View the alignment between query and template
View the model in PyMOL
Template: 3LJC, chain A
Confidence level:very confident
Coverage over the Query: 31-233
View the alignment between query and template
View the model in PyMOL