Citrus Sinensis ID: 003371
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 825 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LY77 | 1033 | Calcium-transporting ATPa | yes | no | 0.968 | 0.773 | 0.707 | 0.0 | |
| Q9LIK7 | 1017 | Putative calcium-transpor | no | no | 0.930 | 0.755 | 0.639 | 0.0 | |
| Q9LF79 | 1074 | Calcium-transporting ATPa | no | no | 0.871 | 0.669 | 0.530 | 0.0 | |
| Q9SZR1 | 1069 | Calcium-transporting ATPa | no | no | 0.875 | 0.675 | 0.518 | 0.0 | |
| Q9LU41 | 1086 | Calcium-transporting ATPa | no | no | 0.88 | 0.668 | 0.528 | 0.0 | |
| Q9M2L4 | 1025 | Putative calcium-transpor | no | no | 0.842 | 0.678 | 0.428 | 1e-168 | |
| O22218 | 1030 | Calcium-transporting ATPa | no | no | 0.875 | 0.700 | 0.423 | 1e-166 | |
| Q2RAS0 | 1017 | Probable calcium-transpor | no | no | 0.906 | 0.735 | 0.416 | 1e-164 | |
| Q2QY12 | 1039 | Probable calcium-transpor | no | no | 0.927 | 0.736 | 0.416 | 1e-162 | |
| Q37145 | 1020 | Calcium-transporting ATPa | no | no | 0.928 | 0.750 | 0.417 | 1e-157 |
| >sp|Q9LY77|ACA12_ARATH Calcium-transporting ATPase 12, plasma membrane-type OS=Arabidopsis thaliana GN=ACA12 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 1059 bits (2738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 577/815 (70%), Positives = 666/815 (81%), Gaps = 16/815 (1%)
Query: 1 MSDTKIPRYNCSTLLINVTTSTLTKAQKRWRLAYWTIYSFRAMLSVLPKGRLLSAEILTS 60
M D K Y+ S LL+N+TTS+L KAQ+RWR AY IYS RAMLS++ + + TS
Sbjct: 1 MRDLK--EYDYSALLLNLTTSSLNKAQRRWRFAYAAIYSMRAMLSLVKEIVPARIDPKTS 58
Query: 61 HDYIALDVEPEPSSSHDEANKLVSNSIDPDMDGIRLAEMVKNKDSHTLSLLGGVEGVANA 120
++L S + N + + + P +D +L E++K KD + LGGVEGVA +
Sbjct: 59 DASLSLSYTALESGEGAKINSMPLSYV-PAIDQEQLVEIMKGKDLPGIQALGGVEGVAAS 117
Query: 121 LGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSL 180
L TNP GI+GN+++VSRR LFG+NTYHKPPPKGLL FV EAFKD TILILLVCA SL
Sbjct: 118 LRTNPTKGIHGNEQEVSRRRDLFGSNTYHKPPPKGLLFFVYEAFKDLTILILLVCAIFSL 177
Query: 181 GFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREAR 240
GFGIKEHG +EGWYEGGSIFVAVFLVIVVSA SNFRQ RQFDKLSKISNNIKVEV+R++R
Sbjct: 178 GFGIKEHGIKEGWYEGGSIFVAVFLVIVVSALSNFRQERQFDKLSKISNNIKVEVLRDSR 237
Query: 241 RLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLF 300
R ISIFD+VVGD+VFLKIGDQIPADGLFL+GHSLQVDESSMTGESDH+EVD +NPFLF
Sbjct: 238 RQHISIFDVVVGDVVFLKIGDQIPADGLFLEGHSLQVDESSMTGESDHLEVDHKDNPFLF 297
Query: 301 SGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAF 360
SG+K+ DG+AQMLVVSVGM+T WG+ MSSI+ DS+ERTPLQ RLD LTSTIGK+GL VA
Sbjct: 298 SGTKIVDGFAQMLVVSVGMSTTWGQTMSSINQDSSERTPLQVRLDTLTSTIGKIGLTVAA 357
Query: 361 LVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLA 420
LVLVVLL RYFTGNT+ E G +EYNGS T +D V N+VV IVAAAVTIVVVAIPEGLPLA
Sbjct: 358 LVLVVLLVRYFTGNTEKE-GKREYNGSKTPVDTVVNSVVRIVAAAVTIVVVAIPEGLPLA 416
Query: 421 VTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIV 480
VTLTLAYSMKRMM+DQAMVRKL ACETMGSATVICTDKTGTLTLN+MKVTKFWLGQESI
Sbjct: 417 VTLTLAYSMKRMMSDQAMVRKLSACETMGSATVICTDKTGTLTLNEMKVTKFWLGQESIH 476
Query: 481 QETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEM 540
+++ I+ + DL +QG GLNTTGSV GS+ EFSGSPTEKA+LSW VL +GM+M
Sbjct: 477 EDSTKMISPDVLDLLYQGTGLNTTGSVCVSDSGST-PEFSGSPTEKALLSWTVLNLGMDM 535
Query: 541 DKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIK 600
+ VKQK+ +L VETF+S KKRSGVL+RRK+DNT H+HWKGAAE++LAMCSHYY S G +
Sbjct: 536 ESVKQKHEVLRVETFSSAKKRSGVLVRRKSDNTVHVHWKGAAEMVLAMCSHYYTSTGSVD 595
Query: 601 SMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIV 660
MD +S+++ II GMAASSLRCIAFA+K A N+ V L+E+GLTL+GIV
Sbjct: 596 LMDSTAKSRIQAIIQGMAASSLRCIAFAHK------IASNDSV-----LEEDGLTLMGIV 644
Query: 661 GIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGV 720
G+KDPCRPGV KAVE C+ AGV IKMITGDNVFTAKAIA ECGIL + + E+ VVEGV
Sbjct: 645 GLKDPCRPGVSKAVETCKLAGVTIKMITGDNVFTAKAIAFECGILDHNDKDEEDAVVEGV 704
Query: 721 EFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADV 780
+FRNYTDEER+QKVDKIRVMARSSP DKLLMV+CL+ KGHVVAVTGDGTNDAPALKEAD+
Sbjct: 705 QFRNYTDEERMQKVDKIRVMARSSPSDKLLMVKCLRLKGHVVAVTGDGTNDAPALKEADI 764
Query: 781 GLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPG 815
GLSMGIQGTEVAKESSDIVILDD+F SVATVL G
Sbjct: 765 GLSMGIQGTEVAKESSDIVILDDNFASVATVLKWG 799
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8 |
| >sp|Q9LIK7|ACA13_ARATH Putative calcium-transporting ATPase 13, plasma membrane-type OS=Arabidopsis thaliana GN=ACA13 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 935 bits (2416), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/796 (63%), Positives = 612/796 (76%), Gaps = 28/796 (3%)
Query: 22 TLTKAQKRWRLAYWTIYSFRAMLSVLPKGRLLSAEILTSHDYIALDVEPEPSSSHDEANK 81
TL+K+ K+W+LA +Y R +L+ S Y A+D++ H +
Sbjct: 26 TLSKSNKKWQLALIKLYCSRTLLNCAKHAIRKPGLFPRSLSYTAIDLDHHHGDDHFK--- 82
Query: 82 LVSNSIDPDMDGIRLAEMVKNKDSHTLSLLGGVEGVANALGTNPEYGINGNDEDVSRRSQ 141
+D L ++VKNK+ L LGG G+ +AL +N GIN +++ RR
Sbjct: 83 ---------IDTETLNDLVKNKNQEKLESLGGPNGLVSALKSNTRLGINEEGDEIQRRRS 133
Query: 142 LFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFV 201
FG+NTY + P KGL HFV+EAFKD TILILL CA LSLGFGIKEHG +EGWY+GGSIFV
Sbjct: 134 TFGSNTYTRQPSKGLFHFVVEAFKDLTILILLGCATLSLGFGIKEHGLKEGWYDGGSIFV 193
Query: 202 AVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGD 261
AVFLV+ VSA SNFRQ RQFDKLSK+S+NIK++VVR RR +ISIFD+VVGDIV L IGD
Sbjct: 194 AVFLVVAVSAVSNFRQNRQFDKLSKVSSNIKIDVVRNGRRQEISIFDIVVGDIVCLNIGD 253
Query: 262 QIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNT 321
Q+PADG+F++GH L VDESSMTGESDHVEV T N FLFSG+K+ADG+ +M V SVGMNT
Sbjct: 254 QVPADGVFVEGHLLHVDESSMTGESDHVEVSLTGNTFLFSGTKIADGFGKMAVTSVGMNT 313
Query: 322 AWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGI 381
AWG+MMS IS D+NE+TPLQ+RLDKLTS+IGKVGL VAFLVL+VLL RYFTG TK E+G
Sbjct: 314 AWGQMMSHISRDTNEQTPLQSRLDKLTSSIGKVGLLVAFLVLLVLLIRYFTGTTKDESGN 373
Query: 382 KEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRK 441
+EYNG T D++ NAVV +VAAAVTI+VVAIPEGLPLAVTLTLAYSMKRMM D AMVRK
Sbjct: 374 REYNGKTTKSDEIVNAVVKMVAAAVTIIVVAIPEGLPLAVTLTLAYSMKRMMKDNAMVRK 433
Query: 442 LPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGL 501
L ACETMGSATVICTDKTGTLTLNQMKVT FW G ES ++ + +LFHQGV +
Sbjct: 434 LSACETMGSATVICTDKTGTLTLNQMKVTDFWFGLES---GKASSVSQRVVELFHQGVAM 490
Query: 502 NTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKR 561
NTTGSV K K G+ EFSGSPTEKA+LSWAV E+ M M+KV +++ ++HVE FNSEKKR
Sbjct: 491 NTTGSVFKAKAGTEY-EFSGSPTEKAILSWAVEELEMGMEKVIEEHDVVHVEGFNSEKKR 549
Query: 562 SGVLIRRKADNTTH--IHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAA 619
SGVL+++K NT + +HWKGAAE ILAMCS + + +GV++ M + + Q E II MAA
Sbjct: 550 SGVLMKKKGVNTENNVVHWKGAAEKILAMCSTFCDGSGVVREMKEDDKIQFEKIIQSMAA 609
Query: 620 SSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQS 679
SLRCIAFAY + +E+ ++LKEE L+LLGI+GIKDPCRPGV+KAVE CQ
Sbjct: 610 KSLRCIAFAYSEDNEDN----------KKLKEEKLSLLGIIGIKDPCRPGVKKAVEDCQF 659
Query: 680 AGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRV 739
AGV IKMITGDN+FTA+AIA ECGIL + ++ V+EG +FRNYT EER++KV++I+V
Sbjct: 660 AGVNIKMITGDNIFTARAIAVECGILTPEDEMNSEAVLEGEKFRNYTQEERLEKVERIKV 719
Query: 740 MARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIV 799
MARSSPFDKLLMV+CLK+ GHVVAVTGDGTNDAPALKEAD+GLSMGIQGTEVAKESSDIV
Sbjct: 720 MARSSPFDKLLMVKCLKELGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIV 779
Query: 800 ILDDDFTSVATVLSPG 815
ILDD+F SVATVL G
Sbjct: 780 ILDDNFASVATVLKWG 795
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9LF79|ACA8_ARATH Calcium-transporting ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=ACA8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 742 bits (1916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/726 (53%), Positives = 515/726 (70%), Gaps = 7/726 (0%)
Query: 95 RLAEMVKNKDSHTLSLLGGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPK 154
+L M K+ +S L GG +G+AN L TNPE GI+G+D+D+ +R ++G+NTY + K
Sbjct: 120 QLVIMSKDHNSGALEQYGGTQGLANLLKTNPEKGISGDDDDLLKRKTIYGSNTYPRKKGK 179
Query: 155 GLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSN 214
G L F+ +A D T++IL+V A SL GIK G +EGWY+GGSI AV LVIVV+A S+
Sbjct: 180 GFLRFLWDACHDLTLIILMVAAVASLALGIKTEGIKEGWYDGGSIAFAVILVIVVTAVSD 239
Query: 215 FRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHS 274
++Q+ QF L+ NI +EV+R RR++ISI+D+VVGD++ L IG+Q+PADG+ + GHS
Sbjct: 240 YKQSLQFQNLNDEKRNIHLEVLRGGRRVEISIYDIVVGDVIPLNIGNQVPADGVLISGHS 299
Query: 275 LQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDS 334
L +DESSMTGES V D+ +PFL SG KVADG MLV VG+NT WG +M+SIS D+
Sbjct: 300 LALDESSMTGESKIVNKDANKDPFLMSGCKVADGNGSMLVTGVGVNTEWGLLMASISEDN 359
Query: 335 NERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDV 394
E TPLQ RL+ + + IG +GLAVA VLV+LL RYFTG+TK NG ++ T + V
Sbjct: 360 GEETPLQVRLNGVATFIGSIGLAVAAAVLVILLTRYFTGHTKDNNGGPQFVKGKTKVGHV 419
Query: 395 FNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVI 454
+ VV ++ AVTIVVVA+PEGLPLAVTLTLAYSM++MM D+A+VR+L ACETMGSAT I
Sbjct: 420 IDDVVKVLTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTI 479
Query: 455 CTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGS 514
C+DKTGTLTLNQM V + + G + E ++ ++I L +G+ NTTGS+ + G
Sbjct: 480 CSDKTGTLTLNQMTVVESYAGGKKTDTE---QLPATITSLVVEGISQNTTGSIFVPEGGG 536
Query: 515 SVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTT 574
+ E+SGSPTEKA+L W V ++GM + + + SILH FNSEKKR GV + + AD
Sbjct: 537 DL-EYSGSPTEKAILGWGV-KLGMNFETARSQSSILHAFPFNSEKKRGGVAV-KTADGEV 593
Query: 575 HIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSE 634
H+HWKGA+EI+LA C Y + +G + M + S +N I+ MA +LRC+A A++
Sbjct: 594 HVHWKGASEIVLASCRSYIDEDGNVAPMTDDKASFFKNGINDMAGRTLRCVALAFRTYEA 653
Query: 635 EETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFT 694
E+ ++ ++ L E+ L LL IVGIKDPCRPGV+ +V CQ+AGV+++M+TGDNV T
Sbjct: 654 EKVPTGEEL-SKWVLPEDDLILLAIVGIKDPCRPGVKDSVVLCQNAGVKVRMVTGDNVQT 712
Query: 695 AKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQC 754
A+AIA ECGIL D + + ++EG FR TD ER + DKI VM RSSP DKLL+VQ
Sbjct: 713 ARAIALECGILSSDADLSEPTLIEGKSFREMTDAERDKISDKISVMGRSSPNDKLLLVQS 772
Query: 755 LKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSP 814
L+++GHVVAVTGDGTNDAPAL EAD+GL+MGI GTEVAKESSDI+ILDD+F SV V+
Sbjct: 773 LRRQGHVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESSDIIILDDNFASVVKVVRW 832
Query: 815 GDQLHS 820
G +++
Sbjct: 833 GRSVYA 838
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9SZR1|ACA10_ARATH Calcium-transporting ATPase 10, plasma membrane-type OS=Arabidopsis thaliana GN=ACA10 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 732 bits (1889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/727 (51%), Positives = 517/727 (71%), Gaps = 5/727 (0%)
Query: 95 RLAEMVKNKDSHTLSLLGGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPK 154
++ + ++++ L LGGV G+++ L TN E GI+G+D+D+ +R FG+NTY + +
Sbjct: 120 QIVSISRDQNIGALQELGGVRGLSDLLKTNLEKGIHGDDDDILKRKSAFGSNTYPQKKGR 179
Query: 155 GLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSN 214
FV EA +D T++IL+V A SL GIK G E+GWY+G SI AV LVIVV+A S+
Sbjct: 180 SFWRFVWEASQDLTLIILIVAAVASLALGIKTEGIEKGWYDGISIAFAVLLVIVVTATSD 239
Query: 215 FRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHS 274
+RQ+ QF L++ NI++EV R+ RR++ISI+D+VVGD++ L IGDQ+PADG+ + GHS
Sbjct: 240 YRQSLQFQNLNEEKRNIRLEVTRDGRRVEISIYDIVVGDVIPLNIGDQVPADGVLVAGHS 299
Query: 275 LQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDS 334
L VDESSMTGES V+ +ST +PFL SG KVADG MLV VG+NT WG +M+S+S D+
Sbjct: 300 LAVDESSMTGESKIVQKNSTKHPFLMSGCKVADGNGTMLVTGVGVNTEWGLLMASVSEDN 359
Query: 335 NERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDV 394
TPLQ RL+ + + IG VGL VA +VL VL+ RYFTG+TK E G ++ G T + V
Sbjct: 360 GGETPLQVRLNGVATFIGIVGLTVAGVVLFVLVVRYFTGHTKNEQGGPQFIGGKTKFEHV 419
Query: 395 FNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVI 454
+ +V I AVTIVVVA+PEGLPLAVTLTLAYSM++MM D+A+VR+L ACETMGSAT I
Sbjct: 420 LDDLVEIFTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTI 479
Query: 455 CTDKTGTLTLNQMKVTKFWLG-QESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPG 513
C+DKTGTLTLN+M V + + G Q+ ++ K+ S+ + +G+ NTTGSV + + G
Sbjct: 480 CSDKTGTLTLNEMTVVECYAGLQKMDSPDSSSKLPSAFTSILVEGIAHNTTGSVFRSESG 539
Query: 514 SSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNT 573
+ SGSPTE+A+L+WA+ ++GM+ D +K + S + FNSEKKR GV + + D++
Sbjct: 540 E--IQVSGSPTERAILNWAI-KLGMDFDALKSESSAVQFFPFNSEKKRGGVAV-KSPDSS 595
Query: 574 THIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVS 633
HIHWKGAAEI+L C+HY + + M + +++ I MAA SLRC+A A++
Sbjct: 596 VHIHWKGAAEIVLGSCTHYMDESESFVDMSEDKMGGLKDAIDDMAARSLRCVAIAFRTFE 655
Query: 634 EEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVF 693
++ + + +R L E+ L LL IVGIKDPCRPGV+ +V CQ AGV+++M+TGDN+
Sbjct: 656 ADKIPTDEEQLSRWELPEDDLILLAIVGIKDPCRPGVKNSVLLCQQAGVKVRMVTGDNIQ 715
Query: 694 TAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQ 753
TAKAIA ECGIL D + ++EG FR+Y++EER + ++I VM RSSP DKLL+VQ
Sbjct: 716 TAKAIALECGILASDSDASEPNLIEGKVFRSYSEEERDRICEEISVMGRSSPNDKLLLVQ 775
Query: 754 CLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813
LK++GHVVAVTGDGTNDAPAL EAD+GL+MGIQGTEVAKE SDI+ILDD+F SV V+
Sbjct: 776 SLKRRGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKEKSDIIILDDNFESVVKVVR 835
Query: 814 PGDQLHS 820
G +++
Sbjct: 836 WGRSVYA 842
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into the endoplasmic reticulum. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9LU41|ACA9_ARATH Calcium-transporting ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=ACA9 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/732 (52%), Positives = 506/732 (69%), Gaps = 6/732 (0%)
Query: 90 DMDGIRLAEMVKNKDSHTLSLLGGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYH 149
D+D +L M +N++ L GGV+GVA L +N E GIN ++++V R FG+NTY
Sbjct: 129 DIDLEKLVSMTRNQNMSNLQQYGGVKGVAEKLKSNMEQGINEDEKEVIDRKNAFGSNTYP 188
Query: 150 KPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVV 209
K K F+ EA++D T++IL++ A SL GIK G +EGW +GGSI AV LVIVV
Sbjct: 189 KKKGKNFFMFLWEAWQDLTLIILIIAAVTSLALGIKTEGLKEGWLDGGSIAFAVLLVIVV 248
Query: 210 SAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLF 269
+A S++RQ+ QF L+ NI++EV+R R ++ISI+D+VVGD++ L+IGDQ+PADG+
Sbjct: 249 TAVSDYRQSLQFQNLNDEKRNIQLEVMRGGRTVKISIYDVVVGDVIPLRIGDQVPADGVL 308
Query: 270 LDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSS 329
+ GHSL +DESSMTGES V D +PFL SG KVADG MLV VG+NT WG +M+S
Sbjct: 309 ISGHSLAIDESSMTGESKIVHKDQ-KSPFLMSGCKVADGVGNMLVTGVGINTEWGLLMAS 367
Query: 330 ISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNT 389
IS D+ E TPLQ RL+ L + IG VGL+VA +VLV LL RYFTG T+ NG ++ T
Sbjct: 368 ISEDTGEETPLQVRLNGLATFIGIVGLSVALVVLVALLVRYFTGTTQDTNGATQFIKGTT 427
Query: 390 DIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMG 449
I D+ + V I AVTIVVVA+PEGLPLAVTLTLAYSM++MM D+A+VR+L ACETMG
Sbjct: 428 SISDIVDDCVKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMG 487
Query: 450 SATVICTDKTGTLTLNQMKVTKFWLGQESI-VQETYCKIASSIRDLFHQGVGLNTTGSVS 508
SAT IC+DKTGTLTLNQM V + + G + V + + + L +GV NTTG++
Sbjct: 488 SATTICSDKTGTLTLNQMTVVETYAGGSKMDVADNPSGLHPKLVALISEGVAQNTTGNIF 547
Query: 509 KLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRR 568
K G V E SGSPTEKA+LSWA ++GM+ D ++ + +I+H FNSEKKR GV + R
Sbjct: 548 HPKDGGEV-EISGSPTEKAILSWA-YKLGMKFDTIRSESAIIHAFPFNSEKKRGGVAVLR 605
Query: 569 KADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFA 628
D+ IHWKGAAEI+LA C+ Y +SNG ++S++ + I MA +SLRC+A A
Sbjct: 606 -GDSEVFIHWKGAAEIVLACCTQYMDSNGTLQSIESQ-KEFFRVAIDSMAKNSLRCVAIA 663
Query: 629 YKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMIT 688
+ + + + L E+ L LL IVGIKDPCRPGV++AV C SAGV+++M+T
Sbjct: 664 CRTQELNQVPKEQEDLDKWALPEDELILLAIVGIKDPCRPGVREAVRICTSAGVKVRMVT 723
Query: 689 GDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDK 748
GDN+ TAKAIA ECGIL D + + ++EG FR +++ER Q KI VM RSSP DK
Sbjct: 724 GDNLQTAKAIALECGILSSDTEAVEPTIIEGKVFRELSEKEREQVAKKITVMGRSSPNDK 783
Query: 749 LLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSV 808
LL+VQ L+K G VVAVTGDGTNDAPAL EAD+GLSMGI GTEVAKESSDI+ILDD+F SV
Sbjct: 784 LLLVQALRKNGDVVAVTGDGTNDAPALHEADIGLSMGISGTEVAKESSDIIILDDNFASV 843
Query: 809 ATVLSPGDQLHS 820
V+ G +++
Sbjct: 844 VKVVRWGRSVYA 855
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9M2L4|ACA11_ARATH Putative calcium-transporting ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=ACA11 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 592 bits (1527), Expect = e-168, Method: Compositional matrix adjust.
Identities = 312/728 (42%), Positives = 464/728 (63%), Gaps = 33/728 (4%)
Query: 96 LAEMVKNKDSHTLSLLGGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKG 155
LA MV+N D+ +L+ +GG EG+A + + G+ ++ + R +++G N Y + P +
Sbjct: 100 LASMVRNHDTKSLTKIGGPEGIAQKVSVSLAEGVRSSELHI--REKIYGENRYTEKPARS 157
Query: 156 LLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNF 215
L FV EA +D T++IL+VCA +S+G G+ G +G Y+G I +++ LV++V+A S++
Sbjct: 158 FLTFVWEALQDITLIILMVCAVVSIGVGVATEGFPKGMYDGTGILLSIILVVMVTAISDY 217
Query: 216 RQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSL 275
+Q+ QF L + I ++V R+ R ++SI DLVVGD+V L IGDQ+PADG+F+ G++L
Sbjct: 218 KQSLQFRDLDREKKKIIIQVTRDGSRQEVSIHDLVVGDVVHLSIGDQVPADGIFISGYNL 277
Query: 276 QVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSN 335
++DESS++GES+ V+ PFL SG+KV +G A+MLV +VGM T WG++M ++S
Sbjct: 278 EIDESSLSGESEPSHVNK-EKPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLMDTLSEGGE 336
Query: 336 ERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNT-DIDDV 394
+ TPLQ +L+ + + IGK+GL A L VVL R+ I E++ + + D
Sbjct: 337 DETPLQVKLNGVATIIGKIGLGFAVLTFVVLCIRFVVEKATA-GSITEWSSEDALTLLDY 395
Query: 395 FNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVI 454
F A AVTI+VVA+PEGLPLAVTL+LA++MK++M+D+A+VR L ACETMGS+T I
Sbjct: 396 F-------AIAVTIIVVAVPEGLPLAVTLSLAFAMKQLMSDRALVRHLAACETMGSSTCI 448
Query: 455 CTDKTGTLTLNQMKVTKFWLGQ---ESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLK 511
CTDKTGTLT N M V K W+ + E + ++ ++++ Q + NT V K K
Sbjct: 449 CTDKTGTLTTNHMVVNKVWICENIKERQEENFQLNLSEQVKNILIQAIFQNTGSEVVKDK 508
Query: 512 PGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKAD 571
G + + GSPTE+A+L + +L +G ++D ++++ IL +E FNS+KK+ VL +
Sbjct: 509 EGKT--QILGSPTERAILEFGLL-LGGDVDTQRREHKILKIEPFNSDKKKMSVLTSH-SG 564
Query: 572 NTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQ 631
KGA+EI+L MC +SNG + + + ++I G A+ +LR + Y
Sbjct: 565 GKVRAFCKGASEIVLKMCEKVVDSNGESVPLSEEKIASISDVIEGFASEALRTLCLVYTD 624
Query: 632 VSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDN 691
+ E R L G TL+ +VGIKDP RPGV++AV+ CQ+AG+ ++M+TGDN
Sbjct: 625 LDE---------APRGDLPNGGYTLVAVVGIKDPVRPGVREAVQTCQAAGITVRMVTGDN 675
Query: 692 VFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLM 751
+ TAKAIA ECGIL G +EG +FRN E + KI+VMARS P DK +
Sbjct: 676 ISTAKAIAKECGIL-----TAGGVAIEGSDFRNLPPHEMRAILPKIQVMARSLPLDKHTL 730
Query: 752 VQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATV 811
V L+K G VVAVTGDGTNDAPAL EAD+GL+MGI GTEVAKE++D++I+DD+F ++ V
Sbjct: 731 VNNLRKMGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFATIVNV 790
Query: 812 LSPGDQLH 819
G ++
Sbjct: 791 AKWGRAVY 798
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O22218|ACA4_ARATH Calcium-transporting ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=ACA4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 587 bits (1512), Expect = e-166, Method: Compositional matrix adjust.
Identities = 322/760 (42%), Positives = 475/760 (62%), Gaps = 38/760 (5%)
Query: 66 LDVEPEPSSSHDEANKLVSNSIDPDMDGIRLAEMVKNKDSHTLSLLGGVEGVANALGTNP 125
+D P + K SI+ D LA MV+ D+ +L+ GGVE +A + +
Sbjct: 74 IDAAARPEYKLTDEVKKAGFSIEAD----ELASMVRKNDTKSLAQKGGVEELAKKVSVSL 129
Query: 126 EYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIK 185
GI ++ V R ++FG N Y + P + L FV EA D T++IL+VCA +S+G G+
Sbjct: 130 SEGIRSSE--VPIREKIFGENRYTEKPARSFLMFVWEALHDITLIILMVCAVVSIGVGVA 187
Query: 186 EHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQIS 245
G G Y+G I +++ LV++V+A S+++Q+ QF L + I V+V R+ R +IS
Sbjct: 188 TEGFPRGMYDGTGILLSILLVVMVTAISDYKQSLQFRDLDREKKKIIVQVTRDGSRQEIS 247
Query: 246 IFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKV 305
I DLVVGD+V L IGDQ+PADG+F+ G++L++DESS++GES+ V+ PFL SG+KV
Sbjct: 248 IHDLVVGDVVHLSIGDQVPADGIFISGYNLEIDESSLSGESEPSHVNK-EKPFLLSGTKV 306
Query: 306 ADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVV 365
+G A+MLV +VGM T WG++M ++ + TPLQ +L+ + + IGK+GL+ A L VV
Sbjct: 307 QNGSAKMLVTTVGMRTEWGKLMETLVDGGEDETPLQVKLNGVATIIGKIGLSFAVLTFVV 366
Query: 366 LLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTL 425
L R+ K +G + +N +D ++ A +VTI+VVA+PEGLPLAVTL+L
Sbjct: 367 LCIRFVL--DKATSG----SFTNWSSEDALT-LLDYFAISVTIIVVAVPEGLPLAVTLSL 419
Query: 426 AYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWL------GQESI 479
A++MK++M+D+A+VR L ACETMGS+T ICTDKTGTLT N M V K W+ QE
Sbjct: 420 AFAMKKLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVWICDKVQERQEGS 479
Query: 480 VQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGME 539
+ +++ ++ QG+ NT V K K G++ + GSPTE+A+L + +L +G +
Sbjct: 480 KESFELELSEEVQSTLLQGIFQNTGSEVVKDKDGNT--QILGSPTERAILEFGLL-LGGD 536
Query: 540 MDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVI 599
+ ++++ IL +E FNS+KK+ VLI KGA+EI+L MC + +SNG
Sbjct: 537 FNTQRKEHKILKIEPFNSDKKKMSVLIALPGGG-ARAFCKGASEIVLKMCENVVDSNGES 595
Query: 600 KSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGI 659
+ + + +II G A+ +LR + YK + E + L + G T++ +
Sbjct: 596 VPLTEERITSISDIIEGFASEALRTLCLVYKDLDEAPSG---------ELPDGGYTMVAV 646
Query: 660 VGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEG 719
VGIKDP RPGV++AV+ CQ+AG+ ++M+TGDN+ TAKAIA ECGI E G +EG
Sbjct: 647 VGIKDPVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGIY-----TEGGLAIEG 701
Query: 720 VEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEAD 779
EFR+ + E + KI+VMARS P DK +V L+K G VVAVTGDGTNDAPAL EAD
Sbjct: 702 SEFRDLSPHEMRAIIPKIQVMARSLPLDKHTLVSNLRKIGEVVAVTGDGTNDAPALHEAD 761
Query: 780 VGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLH 819
+GL+MGI GTEVAKE++D++I+DD+F ++ V G ++
Sbjct: 762 IGLAMGIAGTEVAKENADVIIMDDNFKTIVNVARWGRAVY 801
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into small vacuoles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2RAS0|ACA5_ORYSJ Probable calcium-transporting ATPase 5, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os11g0140400 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 579 bits (1492), Expect = e-164, Method: Compositional matrix adjust.
Identities = 339/814 (41%), Positives = 488/814 (59%), Gaps = 66/814 (8%)
Query: 25 KAQKRWRLAYWTIYSFRA----MLSVLPKGRLLSAEILTSHDYIALDVEPEPSS---SHD 77
+AQ+RWR A TI R + L + L A++ ++ + I + + + ++ S D
Sbjct: 22 EAQRRWRQAVGTIVKNRRRRFRWVPDLDRRSLDKAKVRSTQEKIRVALYVQQAALIFSDD 81
Query: 78 EANKLVSNSIDPDMDGIRLAEMVKNKDSHTLSLLGGVEGVANALGTNPEYGINGNDEDVS 137
E LA + DS L + GGV+G++ + ++ ++GI +D D
Sbjct: 82 E-----------------LALITSKHDSKALKMHGGVDGISKKVRSSFDHGICASDLDT- 123
Query: 138 RRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGG 197
R ++G N Y + P + FV +AF+D T++IL+VCA LS+ G+ G +G Y+G
Sbjct: 124 -RQNIYGVNRYAEKPSRSFWMFVWDAFQDMTLIILMVCALLSVAVGLATEGWPKGMYDGL 182
Query: 198 SIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFL 257
I +++FLV++V+A S+++Q+ QF +L I + V R+ RR +ISI+DLVVGDIV L
Sbjct: 183 GIILSIFLVVMVTAVSDYKQSLQFKELDNEKKKIFIHVTRDGRRQKISIYDLVVGDIVHL 242
Query: 258 KIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSV 317
IGDQ+PADGL++ G+SL +DESS++GESD V V S + PF+ +G+KV DG A+M+V +V
Sbjct: 243 SIGDQVPADGLYIHGYSLLIDESSLSGESDPVYV-SQDKPFILAGTKVQDGSAKMIVTAV 301
Query: 318 GMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKG 377
GM T WG++MS++S + TPLQ +L+ + + IGK+GL A L +VLL R+
Sbjct: 302 GMRTEWGKLMSTLSEGGEDETPLQVKLNGVATVIGKIGLVFAILTFLVLLVRFLIDKGMT 361
Query: 378 ENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQA 437
+K Y+ I + F A AVTI+VVA+PEGLPLAVTL+LA++MK++M D+A
Sbjct: 362 VGLLKWYSTDALTIVNYF-------ATAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNDKA 414
Query: 438 MVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQES-------IVQETYCKIASS 490
+VR L ACETMGSA ICTDKTGTLT N M V K W+ + S I E ++S
Sbjct: 415 LVRHLSACETMGSAGTICTDKTGTLTTNYMVVDKIWISEVSKSVTSNTISGELNSVVSSR 474
Query: 491 IRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQ-KYSI 549
L QG+ NT+ V K K G G+PTE+ A+LE G+ ++ V +YS
Sbjct: 475 TLSLLLQGIFENTSAEVVKEKDGKQTV--LGTPTER-----AILEFGLGLEGVHDAEYSA 527
Query: 550 ---LHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNG 606
+ VE FNS KK+ VLI + T+ KGA+EIIL MC + +G +
Sbjct: 528 CTKVKVEPFNSVKKKMAVLISLPS-GTSRWFCKGASEIILQMCDMMVDGDGNAIPLSEAQ 586
Query: 607 RSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPC 666
R + + I+ A+ +LR + AYK+V ++ + G TL+ I GIKDP
Sbjct: 587 RKNILDTINSFASDALRTLCLAYKEVDDDIDDNADS-------PTSGFTLIAIFGIKDPV 639
Query: 667 RPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYT 726
RPGV+ AV+ C SAG+ ++M+TGDN+ TAKAIA ECGIL E G +EG EF + +
Sbjct: 640 RPGVKDAVKTCMSAGITVRMVTGDNINTAKAIAKECGIL-----TEDGVAIEGPEFHSKS 694
Query: 727 DEERIQKVDKIRVMARSSPFDKLLMVQCLKKK-GHVVAVTGDGTNDAPALKEADVGLSMG 785
EE + I+VMARS P DK +V L+ VV+VTGDGTNDAPAL EAD+GL+MG
Sbjct: 695 PEEMRDLIPNIQVMARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMG 754
Query: 786 IQGTEVAKESSDIVILDDDFTSVATVLSPGDQLH 819
I GTEVAKES+D+++LDD+FT++ V G ++
Sbjct: 755 IAGTEVAKESADVIVLDDNFTTIINVARWGRAVY 788
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2QY12|ACA4_ORYSJ Probable calcium-transporting ATPase 4, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0136900 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 572 bits (1473), Expect = e-162, Method: Compositional matrix adjust.
Identities = 341/819 (41%), Positives = 490/819 (59%), Gaps = 54/819 (6%)
Query: 25 KAQKRWRLAYWTIYSFRA----MLSVLPKGRLLSAEILTSHDYI--ALDVEPEPSSSHDE 78
+AQ+RWR A TI R + L + L A++ ++ + I AL V+ D
Sbjct: 22 EAQRRWRQAVGTIVKNRRRRFRWVPDLERRSLDKAKVRSTQEKIRVALYVQQAALIFSDG 81
Query: 79 ANKL----------VSNSIDPDMDGIRLAEMVKNKDSHTLSLLGGVEGVANALGTNPEYG 128
A K +I+PD LA + DS L + GGV+G++ + ++ ++G
Sbjct: 82 AKKKEYKLTGDIIKAGYAINPD----ELALITSKHDSKALKMHGGVDGISIKVRSSFDHG 137
Query: 129 INGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHG 188
I ++ D R ++G N Y + P + FV +A +D T++IL+VCA LS+ G+ G
Sbjct: 138 IYASELDT--RQNIYGVNRYAEKPSRSFWMFVWDALQDMTLIILMVCALLSVAVGLATEG 195
Query: 189 AEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFD 248
+G Y+G I +++FLV++V+A S+++Q+ QF +L I + V R+ RR +ISI+D
Sbjct: 196 WPKGMYDGLGIILSIFLVVMVTAVSDYKQSLQFKELDNEKKKIFIHVTRDGRRQKISIYD 255
Query: 249 LVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADG 308
LVVGDIV L IGDQ+PADGL++ G+SL +DESS++GESD V V S + PF+ +G+KV DG
Sbjct: 256 LVVGDIVHLSIGDQVPADGLYIHGYSLLIDESSLSGESDPVYV-SQDKPFILAGTKVQDG 314
Query: 309 YAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLA 368
A+M+V +VGM T WG++MS++S + TPLQ +L+ + + IGK+GL A L +VLL
Sbjct: 315 SAKMIVTAVGMRTEWGKLMSTLSEGGEDETPLQVKLNGVATIIGKIGLVFAILTFLVLLV 374
Query: 369 RYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYS 428
R+ +K Y+ I + F A AVTI+VVA+PEGLPLAVTL+LA++
Sbjct: 375 RFLIDKGMTVGLLKWYSTDALTIVNYF-------ATAVTIIVVAVPEGLPLAVTLSLAFA 427
Query: 429 MKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQES-------IVQ 481
MK++M D+A+VR L ACETMGSA ICTDKTGTLT N M V K W+ + S I
Sbjct: 428 MKKLMNDKALVRHLSACETMGSAGTICTDKTGTLTTNHMVVDKIWISEVSKSVTSNTISG 487
Query: 482 ETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMD 541
E ++SS L QG+ NT+ V K K G G+PTE+A+L + L + + D
Sbjct: 488 ELNSVVSSSTLSLLLQGIFENTSAEVVKEKDGKQTV--LGTPTERAILEFG-LGLKGDHD 544
Query: 542 KVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKS 601
+ + + VE FNS KK+ VLI + T+ KGA+EIIL MC + +G
Sbjct: 545 AEYRACTKVKVEPFNSVKKKMAVLISL-PNGTSRWFCKGASEIILQMCDMMVDGDGNAIP 603
Query: 602 MDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVG 661
+ R + + I+ A+ +LR + AYK+V ++ + G TL+ I G
Sbjct: 604 LSEAQRKNILDTINSFASDALRTLCLAYKEVDDDIDDNADS-------PTSGFTLIAIFG 656
Query: 662 IKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVE 721
IKDP RPGV+ AV+ C SAG+ ++M+TGDN+ TAKAIA ECGIL E G +EG E
Sbjct: 657 IKDPVRPGVKDAVKTCMSAGITVRMVTGDNINTAKAIAKECGIL-----TEDGVAIEGPE 711
Query: 722 FRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKK-GHVVAVTGDGTNDAPALKEADV 780
F + + EE + I+VMARS P DK +V L+ VV+VTGDGTNDAPAL EAD+
Sbjct: 712 FHSKSTEEMRDLILNIQVMARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADI 771
Query: 781 GLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLH 819
GL+MGI GTEVAKES+D+++LDD+FT++ V G ++
Sbjct: 772 GLAMGIAGTEVAKESADVIVLDDNFTTIINVARWGRAVY 810
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q37145|ACA1_ARATH Calcium-transporting ATPase 1, chloroplastic OS=Arabidopsis thaliana GN=ACA1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 556 bits (1433), Expect = e-157, Method: Compositional matrix adjust.
Identities = 342/820 (41%), Positives = 489/820 (59%), Gaps = 54/820 (6%)
Query: 25 KAQKRWRLAYWTI------YSFRAMLSVLPKGRLLS--------AEILTSHDYIALDVEP 70
+A +RWR W + + F A LS + + +L S +
Sbjct: 20 EALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQEKFRVAVLVSQAALQFINSL 79
Query: 71 EPSSSH--DEANKLVSNSIDPDMDGIRLAEMVKNKDSHTLSLLGGVEGVANALGTNPEYG 128
+ SS + E + I PD L +V+ D L + GG EG+ L T+ G
Sbjct: 80 KLSSEYTLPEEVRKAGFEICPD----ELGSIVEGHDLKKLKIHGGTEGLTEKLSTSIASG 135
Query: 129 INGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHG 188
I+ +++ +S R +++G N + + P +G FV EA +DTT++IL CA +SL GI G
Sbjct: 136 ISTSEDLLSVRKEIYGINQFTESPSRGFWLFVWEALQDTTLMILAACAFVSLIVGILMEG 195
Query: 189 AEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFD 248
G ++G I ++ LV+ V+A S++RQ+ QF L I V+V R+ R +ISI+D
Sbjct: 196 WPIGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDAEKKKIVVQVTRDKLRQKISIYD 255
Query: 249 LVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADG 308
L+ GD+V L IGDQIPADGLF+ G S+ ++ESS+TGES+ V V S +PFL SG+KV DG
Sbjct: 256 LLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESEPVSV-SVEHPFLLSGTKVQDG 314
Query: 309 YAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLA 368
+MLV +VGM T WG++M+++S ++ TPLQ +L+ + + IGK+GL A + VL+
Sbjct: 315 SCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVITFAVLV- 373
Query: 369 RYFTGNTKGENGIKEYNGSN-TDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAY 427
+G K + S+ D A++ A AVTIVVVA+PEGLPLAVTL+LA+
Sbjct: 374 -------QGLANQKRLDNSHWIWTADELMAMLEYFAVAVTIVVVAVPEGLPLAVTLSLAF 426
Query: 428 SMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWL---GQESIVQETY 484
+MK+MM D+A+VR L ACETMGSAT IC+DKTGTLT N M V K + +E +
Sbjct: 427 AMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACICEQAKEVNGPDAA 486
Query: 485 CKIASSIRD----LFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEM 540
K AS I + L Q + NT G + K + E G+PTE A+L + L +G +
Sbjct: 487 MKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKT--EILGTPTETALLEFG-LSLGGDF 543
Query: 541 DKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIK 600
+V+Q +++ VE FNS KKR GV+I + H KGA+EI+L C Y +G +
Sbjct: 544 QEVRQASNVVKVEPFNSTKKRMGVVIEL-PERHFRAHCKGASEIVLDSCDKYINKDGEVV 602
Query: 601 SMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIV 660
+D S ++NII A+ +LR + AY ++ +E + G T +GIV
Sbjct: 603 PLDEKSTSHLKNIIEEFASEALRTLCLAYFEIGDE-------FSLEAPIPSGGYTCIGIV 655
Query: 661 GIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGV 720
GIKDP RPGV+++V C+SAG+ ++M+TGDN+ TAKAIA ECGIL D G +EG
Sbjct: 656 GIKDPVRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDD-----GIAIEGP 710
Query: 721 EFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKK-GHVVAVTGDGTNDAPALKEAD 779
EFR +DEE ++ + K++VMARSSP DK +V+ L+ VVAVTGDGTNDAPAL EAD
Sbjct: 711 EFREKSDEELLKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEAD 770
Query: 780 VGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLH 819
+GL+MGI GTEVAKES+D++ILDD+F+++ TV G ++
Sbjct: 771 IGLAMGISGTEVAKESADVIILDDNFSTIVTVAKWGRSVY 810
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 825 | ||||||
| 225437164 | 1081 | PREDICTED: calcium-transporting ATPase 1 | 0.985 | 0.752 | 0.718 | 0.0 | |
| 224062319 | 940 | autoinhibited calcium ATPase [Populus tr | 0.877 | 0.770 | 0.782 | 0.0 | |
| 224085537 | 927 | autoinhibited calcium ATPase [Populus tr | 0.866 | 0.771 | 0.781 | 0.0 | |
| 225432838 | 1012 | PREDICTED: putative calcium-transporting | 0.951 | 0.775 | 0.689 | 0.0 | |
| 356504963 | 1053 | PREDICTED: calcium-transporting ATPase 1 | 0.976 | 0.765 | 0.691 | 0.0 | |
| 356570602 | 1065 | PREDICTED: calcium-transporting ATPase 1 | 0.976 | 0.756 | 0.693 | 0.0 | |
| 359477368 | 1013 | PREDICTED: putative calcium-transporting | 0.955 | 0.777 | 0.665 | 0.0 | |
| 225432830 | 1011 | PREDICTED: putative calcium-transporting | 0.950 | 0.775 | 0.686 | 0.0 | |
| 356573611 | 1029 | PREDICTED: putative calcium-transporting | 0.950 | 0.761 | 0.666 | 0.0 | |
| 225432840 | 1012 | PREDICTED: putative calcium-transporting | 0.962 | 0.784 | 0.692 | 0.0 |
| >gi|225437164|ref|XP_002274787.1| PREDICTED: calcium-transporting ATPase 12, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1194 bits (3090), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/835 (71%), Positives = 693/835 (82%), Gaps = 22/835 (2%)
Query: 1 MSDTKIPRYNCSTLLINVTTSTLTKAQKRWRLAYWTIYSFRAMLSVLPKGRLLSAEILTS 60
++ + P Y+C T+++NV+ +T TKAQKRWR+AY I SFR +LS+ + + T+
Sbjct: 5 ITGSYFPHYDCGTIILNVSAATFTKAQKRWRVAYVAICSFRVLLSLSKQNVMRRKATSTA 64
Query: 61 --HDYIALDVEPEPSSSHDEANK------------------LVSNSIDPDMDGIRLAEMV 100
H ++ +D++P S HD+ + LVSN PD++ +L EMV
Sbjct: 65 LLHSHLTVDIQPPTSYHHDDQSDVVPNPDLPDLVPKPHSPDLVSNHALPDIN-TKLTEMV 123
Query: 101 KNKDSHTLSLLGGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFV 160
K KD L GGVEGVA L +P++GI GN++DV RR FG+NTY+KPPPKGL +FV
Sbjct: 124 KEKDLIALRGFGGVEGVAATLLIDPQHGILGNEDDVRRRRDKFGSNTYYKPPPKGLFYFV 183
Query: 161 LEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQ 220
++AFKDTTILILLVCAALSLGFGIKEHG +EGWYEGGSIFVAVFLVI V+A SNFRQ RQ
Sbjct: 184 VDAFKDTTILILLVCAALSLGFGIKEHGPQEGWYEGGSIFVAVFLVISVAALSNFRQERQ 243
Query: 221 FDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDES 280
FDKLSKISNNIK++V R+ RR +ISIFD+VVGD+VFL IGDQIPADGLFL+GHS++VDES
Sbjct: 244 FDKLSKISNNIKIDVARDGRRQEISIFDIVVGDVVFLNIGDQIPADGLFLEGHSMEVDES 303
Query: 281 SMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPL 340
SMTGESDHVEVD NPFLFSGSKVADGYA+MLV SVGMNTAWGEMMSSIS D+NERTPL
Sbjct: 304 SMTGESDHVEVDRERNPFLFSGSKVADGYARMLVTSVGMNTAWGEMMSSISRDTNERTPL 363
Query: 341 QARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVS 400
QARLDKLTS+IGKVGLAVAFLVLVVLL RYFTG+TK ENG +EYNGS+ DI+DV N+VV+
Sbjct: 364 QARLDKLTSSIGKVGLAVAFLVLVVLLIRYFTGHTKDENGQREYNGSDKDINDVLNSVVN 423
Query: 401 IVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTG 460
IVAAAVTI+VVAIPEGLPLAVTLTLAYSMKRMM D AMVRKL ACETMGSAT+ICTDKTG
Sbjct: 424 IVAAAVTIIVVAIPEGLPLAVTLTLAYSMKRMMADHAMVRKLSACETMGSATIICTDKTG 483
Query: 461 TLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFS 520
TLT+NQMKVTKFWLGQE + + I I +LF QGVGLNTTGSV + G +V EFS
Sbjct: 484 TLTMNQMKVTKFWLGQEEMGEIPSNAITPCILELFRQGVGLNTTGSVYRPASG-AVFEFS 542
Query: 521 GSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKG 580
GSPTEKA+LSWAV E+GM+++++KQ YSILHVETFNSEKKRSGV +R+ ADNT H+HWKG
Sbjct: 543 GSPTEKAILSWAVQELGMDVEQLKQTYSILHVETFNSEKKRSGVSMRKNADNTIHVHWKG 602
Query: 581 AAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYN 640
AAE++L MCS+YYE++G IKSMD + R Q+E II GMAASSLRCIAFAYKQ+SE E YN
Sbjct: 603 AAEMVLQMCSNYYETSGTIKSMDEDSRMQLEKIIQGMAASSLRCIAFAYKQISEAEIEYN 662
Query: 641 NDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIAT 700
+D +A Q+L E GLTLLGIVG+KDPCRPGV++AVE C+SAGVEIKMITGDNVFTAKAIAT
Sbjct: 663 DDGRAHQKLNENGLTLLGIVGLKDPCRPGVKRAVEICKSAGVEIKMITGDNVFTAKAIAT 722
Query: 701 ECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGH 760
ECGIL D KG VVEGVEFRNYT EER+QK+DKIRVMARSSPFDKLLMVQCLK+KG
Sbjct: 723 ECGILGSDDTEHKGAVVEGVEFRNYTHEERMQKIDKIRVMARSSPFDKLLMVQCLKQKGE 782
Query: 761 VVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPG 815
VVAVTGDGTNDAPALKEAD+GLSMGIQGTEVAKESSDIVILDD+FTSVATVL G
Sbjct: 783 VVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFTSVATVLRWG 837
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224062319|ref|XP_002300816.1| autoinhibited calcium ATPase [Populus trichocarpa] gi|222842542|gb|EEE80089.1| autoinhibited calcium ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1130 bits (2924), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 568/726 (78%), Positives = 639/726 (88%), Gaps = 2/726 (0%)
Query: 90 DMDGIRLAEMVKNKDSHTLSLLGGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYH 149
D D ++ +MVK KD +L+ LGGVEGVA A G N + GI G+DE+V RR ++FG NTYH
Sbjct: 5 DDDQMKFTKMVKEKDLASLNNLGGVEGVATAFGINSKTGITGHDEEVRRRREMFGPNTYH 64
Query: 150 KPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVV 209
KPPPKG L F LEAF+DTTILILLVCAAL+LGFGIK+HG +EGWYEGGSIFVAVFLVIVV
Sbjct: 65 KPPPKGFLFFALEAFRDTTILILLVCAALALGFGIKQHGVKEGWYEGGSIFVAVFLVIVV 124
Query: 210 SAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLF 269
SA SNFRQ QFDKLSKISNNIKV+V+R RR QISIFD+VVGDIVFL IGDQIPADGLF
Sbjct: 125 SASSNFRQETQFDKLSKISNNIKVDVLRNERRQQISIFDIVVGDIVFLNIGDQIPADGLF 184
Query: 270 LDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSS 329
LDGHSL+VDESSMTGESDHV V++ NPFLFSGSK+ADGYA+MLV SVGMNTAWGEMMSS
Sbjct: 185 LDGHSLEVDESSMTGESDHVAVNTQENPFLFSGSKIADGYARMLVTSVGMNTAWGEMMSS 244
Query: 330 ISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNT 389
I+ DSNERTPLQARLDKLTS+IGKVGL+VAF+VLVV+L RYFTGNTK + G KEY GS T
Sbjct: 245 ITRDSNERTPLQARLDKLTSSIGKVGLSVAFVVLVVMLVRYFTGNTKDDKGKKEYIGSRT 304
Query: 390 DIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMG 449
D DDV NAVV IVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMM DQAMVRKL ACETMG
Sbjct: 305 DTDDVLNAVVRIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRKLSACETMG 364
Query: 450 SATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSK 509
SATVICTDKTGTLTLN+MKVTKFWLGQE I +++Y IA SI ++FHQGV LNTTGSV K
Sbjct: 365 SATVICTDKTGTLTLNKMKVTKFWLGQEPIEEDSYKTIAPSILEVFHQGVSLNTTGSVYK 424
Query: 510 LKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRK 569
G SV EFSGSPTEKA+LSWAV E+GM+M+K+K+ +ILHVETFNSEKKRSGV IR+K
Sbjct: 425 SATG-SVPEFSGSPTEKAILSWAVSELGMDMEKLKESCTILHVETFNSEKKRSGVSIRKK 483
Query: 570 ADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAY 629
ADNT H+HWKGAAE+ILA+CS YY+S G IKSMD + RS++ENII GMAASSLRCIAFA+
Sbjct: 484 ADNTVHVHWKGAAEMILALCSSYYDSRGSIKSMDEDERSKIENIIQGMAASSLRCIAFAH 543
Query: 630 KQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITG 689
K+++EE +ND + QRL+E+GLTLLGIVG+KDPCR G +KAVE C++AGV +KMITG
Sbjct: 544 KRITEEGMK-DNDGEPHQRLQEDGLTLLGIVGLKDPCRIGAKKAVEICKAAGVSVKMITG 602
Query: 690 DNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKL 749
DN+FTAKAIATECGIL L QV+ EVVEGV FRNYTDE+R++KVDKIRVMARSSPFDKL
Sbjct: 603 DNIFTAKAIATECGILELKSQVDSEEVVEGVVFRNYTDEQRMEKVDKIRVMARSSPFDKL 662
Query: 750 LMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVA 809
LMVQCL++KGHVVAVTGDGTNDAPALKEAD+GLSMGIQGTEVAKESSDIVILDD+FTSVA
Sbjct: 663 LMVQCLRQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFTSVA 722
Query: 810 TVLSPG 815
TVL G
Sbjct: 723 TVLRWG 728
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224085537|ref|XP_002307612.1| autoinhibited calcium ATPase [Populus trichocarpa] gi|222857061|gb|EEE94608.1| autoinhibited calcium ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1114 bits (2881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/717 (78%), Positives = 633/717 (88%), Gaps = 2/717 (0%)
Query: 99 MVKNKDSHTLSLLGGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLH 158
MVK KD L+ LGGVEGVA LGTN + GI G+D++VSRR ++FG+NTYHKPPPKG L
Sbjct: 1 MVKEKDLIALNHLGGVEGVATVLGTNSKIGITGHDQEVSRRREMFGSNTYHKPPPKGFLF 60
Query: 159 FVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQA 218
FV+EAF+DTTILILLVCAALSLGFGIK+HG +EGWYEGGSIFVAVFLVIVVSA SN+RQ
Sbjct: 61 FVMEAFRDTTILILLVCAALSLGFGIKQHGIKEGWYEGGSIFVAVFLVIVVSASSNYRQE 120
Query: 219 RQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVD 278
QFDKLSKISNNIKV+V+R RR QISIFD+VVGDIVFL IGDQIPADGLFLDGHSL+VD
Sbjct: 121 TQFDKLSKISNNIKVDVLRNERRQQISIFDIVVGDIVFLNIGDQIPADGLFLDGHSLEVD 180
Query: 279 ESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERT 338
ESSMTGESDHV V++ NPFLFSGSK+ADGYA+MLV SVGMNTAWGEMMSSI+ DSNERT
Sbjct: 181 ESSMTGESDHVAVNTQENPFLFSGSKIADGYARMLVTSVGMNTAWGEMMSSITRDSNERT 240
Query: 339 PLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAV 398
PLQARLDKLTS+IGKVGL+VAF+VLVV+L RYFTGNTK NG KEY GS T+ DDV NAV
Sbjct: 241 PLQARLDKLTSSIGKVGLSVAFIVLVVMLVRYFTGNTKDGNGKKEYIGSKTNTDDVLNAV 300
Query: 399 VSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDK 458
V IVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMM DQAMVRKL ACETMGSATVICTDK
Sbjct: 301 VRIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRKLSACETMGSATVICTDK 360
Query: 459 TGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAE 518
TGTLTLNQMKV KFWLGQE I ++TY IA SI +L HQGV LNTTGSV K GS E
Sbjct: 361 TGTLTLNQMKVAKFWLGQEPIEEDTYKAIAPSILELLHQGVSLNTTGSVYKSASGSG-PE 419
Query: 519 FSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHW 578
FSGSPTEKA+LSWAV E+GM+M+++KQ +ILHVETFNSEKKRSGV IR+ AD+T H+HW
Sbjct: 420 FSGSPTEKAILSWAVSELGMDMEELKQSCTILHVETFNSEKKRSGVSIRKMADDTVHVHW 479
Query: 579 KGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETA 638
KGAAE+ILA+CS YYES+G+IKSMD + RS++ II GMAASSLRCIAFA+K+V+EE
Sbjct: 480 KGAAEMILALCSSYYESSGIIKSMDEDERSKIGKIIQGMAASSLRCIAFAHKRVTEEGMK 539
Query: 639 YNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAI 698
++D ++ QRL+E+GLT LG+VG+KDPCR G +KAVE C++AGV +KMITGDN+FTAKAI
Sbjct: 540 -DDDGESHQRLQEDGLTFLGLVGLKDPCRIGAKKAVELCKAAGVSVKMITGDNIFTAKAI 598
Query: 699 ATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKK 758
ATECGIL L+ V+ EVVEGV FRNYT+E+R++KVDKIRVMARSSPFDKLLMVQCL++K
Sbjct: 599 ATECGILELNNYVDNEEVVEGVVFRNYTNEQRMEKVDKIRVMARSSPFDKLLMVQCLRQK 658
Query: 759 GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPG 815
GHVVAVTGDGTNDAPALKEAD+GLSMGIQGTEVAKESSDIVILDD+FTSVATVL G
Sbjct: 659 GHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFTSVATVLRWG 715
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432838|ref|XP_002279864.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1087 bits (2810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/806 (68%), Positives = 647/806 (80%), Gaps = 21/806 (2%)
Query: 10 NCSTLLINVTTSTLTKAQKRWRLAYWTIYSFRAMLSVLPKGRLLSAEILTSHDYIALDVE 69
NC +++V STL+K KRW LA+ TIY R + S+L + + S + + ++ L+V+
Sbjct: 10 NCIESILDVP-STLSKPNKRWHLAFATIYCARVLHSLLNEKKNSSKLPVATPSFVVLNVK 68
Query: 70 PEPSSSHDEANKLVSNSIDPDMDGIRLAEMVKNKDSHTLSLLGGVEGVANALGTNPEYGI 129
P+ SS D+ L E+VK K+ L GGVEGVA+AL T+ + GI
Sbjct: 69 PDAFSSIDQTT---------------LTEIVKEKNLKLLLESGGVEGVADALETDIKNGI 113
Query: 130 NGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGA 189
+G +DV+ R + FG+NTY +PP K L HFV+EAFKD TILILL CAALSLGFGIKEHG
Sbjct: 114 SGAVDDVALRQEAFGSNTYKRPPTKSLFHFVVEAFKDLTILILLFCAALSLGFGIKEHGL 173
Query: 190 EEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDL 249
+EGWY+GGSIFVAV LVI VSA SNFRQ RQF+KLSK+SNNIK++V R RR QISIF++
Sbjct: 174 KEGWYDGGSIFVAVILVISVSAVSNFRQNRQFEKLSKVSNNIKIDVFRNGRRQQISIFEI 233
Query: 250 VVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGY 309
VVGD+V LKIGDQ+PADGLFLDGHSLQVDESSMTGESDHVEV+S++NPFLFSG+KVADGY
Sbjct: 234 VVGDVVSLKIGDQVPADGLFLDGHSLQVDESSMTGESDHVEVNSSHNPFLFSGTKVADGY 293
Query: 310 AQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLAR 369
AQMLV SVGMNT WG+MMS+IS D+NE+TPLQARL+KLTS+IGK GLAVAFLVL+VLL R
Sbjct: 294 AQMLVTSVGMNTTWGQMMSTISRDTNEQTPLQARLNKLTSSIGKAGLAVAFLVLLVLLVR 353
Query: 370 YFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSM 429
YFTGNT+ ENG +E+NGS T DD+ NAVV I+A AVTIVVVAIPEGLPLAVTLTLAYSM
Sbjct: 354 YFTGNTEDENGNQEFNGSKTKADDIVNAVVEIIATAVTIVVVAIPEGLPLAVTLTLAYSM 413
Query: 430 KRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIAS 489
KRMM DQAMVRKL ACETMGSAT ICTDKTGTLT+NQMKVTK WLGQE I E I+
Sbjct: 414 KRMMADQAMVRKLSACETMGSATTICTDKTGTLTMNQMKVTKIWLGQEPI--EVSSSISE 471
Query: 490 SIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSI 549
++ +L QGV LNTTGSV + GS EF GSPTEKA+LSWAVLE+ M+M+ +KQ +I
Sbjct: 472 NLLNLIQQGVALNTTGSVYRATSGSYKFEFFGSPTEKAILSWAVLELDMDMEILKQNCTI 531
Query: 550 LHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQ 609
LHVE FNSEKKRSGV IR KADNT H+HWKGAAE+ILAMCS YY+++G +K +D R
Sbjct: 532 LHVEAFNSEKKRSGVSIRSKADNTIHVHWKGAAEMILAMCSSYYDASGSMKDLDDCERKT 591
Query: 610 MENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPG 669
E II GMAASSLRCIAFA+KQ+ EEE +A Q+LKE+GL +G+VGIKDPCRPG
Sbjct: 592 FEQIIQGMAASSLRCIAFAHKQILEEEHEIR---EATQKLKEDGLAFVGLVGIKDPCRPG 648
Query: 670 VQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEE 729
V+KAVE CQ AGV +KMITGDNVFTA+AIATECGILR DQ + VVEG FRNYT EE
Sbjct: 649 VRKAVEDCQHAGVNVKMITGDNVFTARAIATECGILRPDQGINNEAVVEGEVFRNYTPEE 708
Query: 730 RIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGT 789
R++KVDKIRVMARSSPFDKLLMVQCLK+ GHVVAVTGDGTNDAPALKEAD+GLSMGIQGT
Sbjct: 709 RMEKVDKIRVMARSSPFDKLLMVQCLKQNGHVVAVTGDGTNDAPALKEADIGLSMGIQGT 768
Query: 790 EVAKESSDIVILDDDFTSVATVLSPG 815
EVAKESSDI+ILDD+F SVATVL G
Sbjct: 769 EVAKESSDIIILDDNFASVATVLRWG 794
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356504963|ref|XP_003521262.1| PREDICTED: calcium-transporting ATPase 12, plasma membrane-type-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1086 bits (2808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 575/831 (69%), Positives = 675/831 (81%), Gaps = 25/831 (3%)
Query: 1 MSDTKIPRYNCSTLLINVTTS---TLTKAQKRWRLAYWTIYSFRAMLSVLPKGRLLSAEI 57
MS+++ P Y+ S+ LI++TT+ T++ A+KRWR AY IYS R MLS+ + ++S
Sbjct: 1 MSNSQNPNYDGSSFLIDITTTVNYTISTAKKRWRFAYTAIYSRRVMLSLAKE--IISKRN 58
Query: 58 LTSHDYI------------ALDVEPEPSSSHDEANKLVSNSIDPDMDGIRLAEMVKNKDS 105
+H Y LD+ H N S+ PD+D RLA MVK+K+
Sbjct: 59 TNTHPYSKLFQTQSTGSGSTLDIIEPLIPQHGTNNHY---SLVPDVDKARLASMVKDKNL 115
Query: 106 HTLSLLGGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFK 165
G VEGVAN LGT P GI+G+D+DV++R +LFG+NTY +PPPK + FV+EAF
Sbjct: 116 EAFVEFGRVEGVANTLGTIPAKGISGDDDDVAKRCELFGSNTYQRPPPKVFVSFVVEAFN 175
Query: 166 DTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLS 225
DTTILILLVCA LSLGFGIKEHG EGWYEGGSIFVAVFLV+VV+A SNFRQ RQFDKLS
Sbjct: 176 DTTILILLVCAGLSLGFGIKEHGPGEGWYEGGSIFVAVFLVVVVTALSNFRQERQFDKLS 235
Query: 226 KISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGE 285
KISNNIKV VVR R QISIF+++VGD+V LKIGDQIPADGLFL GHSLQVDESSMTGE
Sbjct: 236 KISNNIKVGVVRNGRPQQISIFEVLVGDVVSLKIGDQIPADGLFLSGHSLQVDESSMTGE 295
Query: 286 SDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLD 345
SDHVE++ +N+PFL SG+KV DG+AQMLV SVG NTAWGEMMSSIS D+ ERTPLQARLD
Sbjct: 296 SDHVEIEPSNSPFLLSGAKVVDGFAQMLVTSVGTNTAWGEMMSSISRDTKERTPLQARLD 355
Query: 346 KLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAA 405
KLTS+IGKVGLAVAFLVL+VLL RYFTGN++ + G +E+ GS TD++DVFNAVV IVAAA
Sbjct: 356 KLTSSIGKVGLAVAFLVLIVLLIRYFTGNSEDDKGNQEFQGSKTDVNDVFNAVVRIVAAA 415
Query: 406 VTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLN 465
VTIVVVAIPEGLPLAVTLTLAYSMKRMM DQAMVRKL ACETMGSATVICTDKTGTLTLN
Sbjct: 416 VTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRKLSACETMGSATVICTDKTGTLTLN 475
Query: 466 QMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGS-SVAEFSGSPT 524
QM+VTKFWLG E+ ++ +A ++ +LFHQGVGLNTTGS+ KP S S E SGSPT
Sbjct: 476 QMRVTKFWLGLENGMENFSNAMAPNVLELFHQGVGLNTTGSI--YKPSSESEPEISGSPT 533
Query: 525 EKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEI 584
EKA+L WAV ++GM+MD++K+ + +LHVETFNSEKKRSGV IR++ +NT H+HWKGAAEI
Sbjct: 534 EKAILLWAVSDLGMDMDELKRTHEVLHVETFNSEKKRSGVAIRKETNNTVHVHWKGAAEI 593
Query: 585 ILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVK 644
ILAMCS+Y + NG+ KS+D + RS++E II GMAASSLRCIAFA ++S E+ YN+ K
Sbjct: 594 ILAMCSNYIDYNGIEKSLDED-RSKLEKIIQGMAASSLRCIAFACMKIS-EDIDYNDKEK 651
Query: 645 ARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGI 704
Q L+++GLTLLGIVG+KDPCRP V+KAVE C+ AGV IKMITGDN+FTAKAIATECGI
Sbjct: 652 VHQILRKDGLTLLGIVGLKDPCRPDVKKAVETCKLAGVSIKMITGDNIFTAKAIATECGI 711
Query: 705 LRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAV 764
L LD V GEVV+GVEFRNYT+EER++KV+KIRVMARSSP DKLLMVQCLKKKGHVVAV
Sbjct: 712 LDLDGHVNAGEVVQGVEFRNYTEEERMEKVEKIRVMARSSPLDKLLMVQCLKKKGHVVAV 771
Query: 765 TGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPG 815
TGDGTNDAPALKEAD+GLSMGIQGTEVAKESSDIVILDD+F SVATVL G
Sbjct: 772 TGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFNSVATVLRWG 822
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356570602|ref|XP_003553474.1| PREDICTED: calcium-transporting ATPase 12, plasma membrane-type-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1085 bits (2805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 576/831 (69%), Positives = 672/831 (80%), Gaps = 25/831 (3%)
Query: 1 MSDTKIPRYNCSTLLINVTTS---TLTKAQKRWRLAYWTIYSFRAMLSVLPKGRLLSAEI 57
MS+++ P+Y+ S+ LI++TT+ T+ A+KRWR AY IYS R ML++ + ++S
Sbjct: 1 MSNSQNPKYDDSSFLIDITTTVNYTINTAKKRWRFAYTAIYSRRVMLALAKE--VISKRN 58
Query: 58 LTSHDY------------IALDVEPEPSSSHDEANKLVSNSIDPDMDGIRLAEMVKNKDS 105
+H Y LD+ H N S+ PD+D RLA MVK+K+
Sbjct: 59 TNTHPYSKLFQSQSSGSGSILDIIEPLIPQHGTNNHY---SLVPDVDKARLASMVKDKNL 115
Query: 106 HTLSLLGGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFK 165
+ GGVEGVAN LGT P GI+G+D+DV+ R +LFG+NTY +PPPK L FV+EAF
Sbjct: 116 EAFAEFGGVEGVANILGTIPAKGISGSDDDVATRRELFGSNTYQRPPPKVFLSFVVEAFN 175
Query: 166 DTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLS 225
DTTILILLVCA LSLGFGIKEHG EGWYEGGSIFVAVFLV+VV+A SNFRQ RQFDKLS
Sbjct: 176 DTTILILLVCAGLSLGFGIKEHGPGEGWYEGGSIFVAVFLVVVVTALSNFRQERQFDKLS 235
Query: 226 KISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGE 285
KISNNIKVEVVR R QISIF++ VGDIV LKIGDQIPADGLFL G+SL VDESSMTGE
Sbjct: 236 KISNNIKVEVVRNGRPQQISIFEVHVGDIVSLKIGDQIPADGLFLSGYSLLVDESSMTGE 295
Query: 286 SDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLD 345
SDHVE++ +N+PFL SG+KV DG+AQMLV SVG NTAWGEMMSSIS D+ ERTPLQARLD
Sbjct: 296 SDHVEIEPSNSPFLLSGAKVVDGFAQMLVTSVGTNTAWGEMMSSISRDTKERTPLQARLD 355
Query: 346 KLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAA 405
KLTS+IGKVGLAVAFLVL+VLL RYFTGNT+ + G +E+ GS TD++DVFNAVV IVAAA
Sbjct: 356 KLTSSIGKVGLAVAFLVLIVLLIRYFTGNTQDDKGNQEFQGSKTDVNDVFNAVVRIVAAA 415
Query: 406 VTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLN 465
VTIVVVAIPEGLPLAVTLTLAYSMKRMM DQAMVRKL ACETMGSATVICTDKTGTLTLN
Sbjct: 416 VTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRKLSACETMGSATVICTDKTGTLTLN 475
Query: 466 QMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGS-SVAEFSGSPT 524
QM+VTKFWLG E+ ++ +A + +LFHQGVGLNTTGS+ KP S S E SGSPT
Sbjct: 476 QMRVTKFWLGLENAMENFSNAMAPKVLELFHQGVGLNTTGSI--YKPSSESEPEISGSPT 533
Query: 525 EKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEI 584
EKA+L WA ++GM+MD++K+ + +LHVETFNSEKKRSGV IR+K ++T H+HWKGAAEI
Sbjct: 534 EKAILLWAASDLGMDMDELKRTHEVLHVETFNSEKKRSGVAIRKKTNSTVHVHWKGAAEI 593
Query: 585 ILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVK 644
ILAMCS+Y ++NG+ KS+D + RS++E II GMAASSLRCIAFAY +SE+ YN+ K
Sbjct: 594 ILAMCSNYIDNNGIEKSLDED-RSKLEKIIQGMAASSLRCIAFAYMHISEDND-YNDKEK 651
Query: 645 ARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGI 704
Q L+++GLTLLGIVG+KDPCR V+KAVE C+ AGV IKMITGDN+FTAKAIA ECGI
Sbjct: 652 VHQILRKDGLTLLGIVGLKDPCRSDVKKAVETCKLAGVSIKMITGDNIFTAKAIAAECGI 711
Query: 705 LRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAV 764
L LD V GEVVEGVEFRNYT+EER++KV+KIRVMARSSP DKLLMVQCLKKKGHVVAV
Sbjct: 712 LDLDGHVNAGEVVEGVEFRNYTEEERMEKVEKIRVMARSSPLDKLLMVQCLKKKGHVVAV 771
Query: 765 TGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPG 815
TGDGTNDAPALKEAD+GLSMGIQGTEVAKESSDIVILDD+F SVATVL G
Sbjct: 772 TGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFNSVATVLRWG 822
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359477368|ref|XP_003631969.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1067 bits (2759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/810 (66%), Positives = 638/810 (78%), Gaps = 22/810 (2%)
Query: 10 NCSTLLINVTTSTLTKAQKRWRLAYWTIYSFRAMLSVLPKGRLLSAEILTSHDYIALDVE 69
+C +++V +T + KRW LA+ TIY RA+ S+L K S +++H ++ L VE
Sbjct: 12 SCRESILDVP-ATRGRHNKRWHLAFATIYCSRALHSLLNKKS--SKPPVSTHSFVVLSVE 68
Query: 70 PEPSSSHDEANKLVSNSIDPDMDGIRLAEMVKNKDSHTLSLLGGVEGVANALGTNPEYGI 129
P + P++D L +VK K+ L LGGVEGVA+AL T+ + GI
Sbjct: 69 PHLAF--------------PNIDHTSLTAVVKEKNLDQLRELGGVEGVADALKTDTKNGI 114
Query: 130 NGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGA 189
+G EDV+ R + FG+NTY +PP K +FVLEAFKD TILILL CA LSLGFGIKEHG
Sbjct: 115 HGAVEDVAERQETFGSNTYPRPPTKSFFYFVLEAFKDLTILILLACATLSLGFGIKEHGP 174
Query: 190 EEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDL 249
+EGWY+GGSIFVAVFLVI VSA SNFRQ RQF+KLSK+SNNI+VEVVR R +ISIFD+
Sbjct: 175 KEGWYDGGSIFVAVFLVISVSAVSNFRQNRQFEKLSKVSNNIEVEVVRGGHRQKISIFDI 234
Query: 250 VVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGY 309
VVGD+ L+IGDQ+PADGLFL GHSLQVDESSMTG+SD+VEV+S++NPFLFSG+KVADGY
Sbjct: 235 VVGDVACLQIGDQVPADGLFLAGHSLQVDESSMTGKSDYVEVNSSHNPFLFSGTKVADGY 294
Query: 310 AQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLAR 369
AQMLV SVGMNT WGEMMS+IS D+NE+TPLQARL+KLTS+IGKVG+AVAFLVLVV LAR
Sbjct: 295 AQMLVTSVGMNTTWGEMMSTISRDTNEQTPLQARLNKLTSSIGKVGMAVAFLVLVVSLAR 354
Query: 370 YFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSM 429
YFTG T+ ENG +E+ GSN D+ N++V+I+AAA TI+ VAIP+GL LAVTL L YSM
Sbjct: 355 YFTGITEDENGNREFIGSNIKAVDMVNSMVTIIAAAFTILAVAIPKGLLLAVTLILTYSM 414
Query: 430 KRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIAS 489
KRMM DQAMVRKL ACETMGSAT ICTDKTGTLTLNQMKVTK+WLG+E + E IA+
Sbjct: 415 KRMMADQAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKYWLGKEPV--EDSSSIAT 472
Query: 490 SIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSI 549
++ L QGV LNTTGSV K GSS EFSGSPTEKA+LSWAVLE+ M+M+ +KQ +I
Sbjct: 473 NVLKLIQQGVALNTTGSVYKASSGSSKFEFSGSPTEKAILSWAVLELDMDMEILKQNCTI 532
Query: 550 LHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQ 609
LHVE FNSEKKRSGV IR KADNT H+HWKGAAE+ILAMCS YY+++G +K MD R
Sbjct: 533 LHVEAFNSEKKRSGVSIRSKADNTIHVHWKGAAEMILAMCSRYYDASGSMKDMDDGERMI 592
Query: 610 MENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPG 669
E II GMAASSLRCIAFA+ Q+ E+ + Q LKE LTL+G+VGIKDPCRPG
Sbjct: 593 FEQIIQGMAASSLRCIAFAHTQIPGEQHEIGVGL---QNLKEHSLTLIGLVGIKDPCRPG 649
Query: 670 VQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEE 729
V+KAVE CQ AGV +KMITGDNVFTA+A+ATECGILR DQ + VVEG FRNYT EE
Sbjct: 650 VRKAVEDCQCAGVNVKMITGDNVFTARAMATECGILRPDQDMTSEAVVEGEVFRNYTPEE 709
Query: 730 RIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGT 789
R++KVDKI VMARSSPFDKLLMV+CLK+KGHVVAVTGDG+NDAPALKEA +GLSMGI GT
Sbjct: 710 RLEKVDKIHVMARSSPFDKLLMVRCLKQKGHVVAVTGDGSNDAPALKEAHIGLSMGIHGT 769
Query: 790 EVAKESSDIVILDDDFTSVATVLSPGDQLH 819
EVAKESSDI+ILDD+FTSVATVL G ++
Sbjct: 770 EVAKESSDIIILDDNFTSVATVLRWGRSVY 799
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432830|ref|XP_002279629.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1064 bits (2752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/806 (68%), Positives = 650/806 (80%), Gaps = 22/806 (2%)
Query: 10 NCSTLLINVTTSTLTKAQKRWRLAYWTIYSFRAMLSVLPKGRLLSAEILTSHDYIALDVE 69
+C +++V +TL + KRW LA+ TIY RA+ S+L K + S +++H ++ L VE
Sbjct: 10 SCRESILDVP-ATLGRHNKRWHLAFATIYCSRALHSLLNKKKS-SKPPVSTHSFVVLSVE 67
Query: 70 PEPSSSHDEANKLVSNSIDPDMDGIRLAEMVKNKDSHTLSLLGGVEGVANALGTNPEYGI 129
P + P++D L +VK K+ L LGGVEGVA+AL T+ + GI
Sbjct: 68 PHLAF--------------PNIDHTSLTAVVKEKNLDQLRKLGGVEGVADALKTDTKSGI 113
Query: 130 NGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGA 189
+G EDV+ R + FG+NTY +PP K +FVLEAFKD TILILL CA LSLGFGIKEHG
Sbjct: 114 HGAVEDVAERQETFGSNTYPRPPTKSFFYFVLEAFKDLTILILLACATLSLGFGIKEHGP 173
Query: 190 EEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDL 249
+EGWY+GGSIFVAVFLVI VSA SNFRQ RQF+KLSK+SNNI+VEVVR R +ISIFD+
Sbjct: 174 KEGWYDGGSIFVAVFLVISVSAVSNFRQNRQFEKLSKVSNNIEVEVVRGGHRQKISIFDI 233
Query: 250 VVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGY 309
VVGD+ LKIGDQ+PADGLFL GHSLQVDESSMTGESDHVE++S+ NPFLFSG+KVADGY
Sbjct: 234 VVGDVACLKIGDQVPADGLFLAGHSLQVDESSMTGESDHVEINSSQNPFLFSGTKVADGY 293
Query: 310 AQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLAR 369
AQMLV SVGMNT WGEMMS+IS D+NE+TPLQARL+KLTS+IGKVGLAVAFLVL+VL+ R
Sbjct: 294 AQMLVTSVGMNTTWGEMMSTISRDNNEQTPLQARLNKLTSSIGKVGLAVAFLVLLVLVVR 353
Query: 370 YFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSM 429
YFTGNT+ ENG +E+NGS T DD+ NA+V I+AAAVTIVVVAIPEGLPLAVTLTLAYSM
Sbjct: 354 YFTGNTEDENGNQEFNGSKTKADDIVNAMVRIIAAAVTIVVVAIPEGLPLAVTLTLAYSM 413
Query: 430 KRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIAS 489
KRMM DQAMVRKL ACETMGSAT ICTDKTGTLTLNQMKVTK+WLG+E + E IA+
Sbjct: 414 KRMMADQAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKYWLGKEPV--EDSSSIAT 471
Query: 490 SIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSI 549
++ L QGV LNTTGS+ + S EFSGSPTEKA+LSWAVLE+ M+M+++KQ Y+I
Sbjct: 472 NVLKLIQQGVALNTTGSIYRATSKSEF-EFSGSPTEKALLSWAVLELDMDMERLKQNYTI 530
Query: 550 LHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQ 609
LHVE FNSEKKRSG+L+R+KADN H+HWKGAAE+ILAMCS YY+++G +K +D R
Sbjct: 531 LHVEAFNSEKKRSGILMRKKADNKIHVHWKGAAEMILAMCSSYYDASGSMKELDDGERMT 590
Query: 610 MENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPG 669
E II GMAASSLRCIAFA+KQ+ EEE + RQ+LKE+ LTL+G+VGIKDPCRPG
Sbjct: 591 FEQIIQGMAASSLRCIAFAHKQIPEEEQEIR---EGRQKLKEDSLTLIGLVGIKDPCRPG 647
Query: 670 VQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEE 729
V+KAVE CQ AGV +KMITGDNVFTA+AIATECGILR DQ + VVEG FR YT EE
Sbjct: 648 VRKAVEDCQYAGVNVKMITGDNVFTARAIATECGILRPDQDINSEAVVEGEVFRKYTSEE 707
Query: 730 RIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGT 789
R++KVDKI VMARSSPFDKLLMVQCLK+KGHVVAVTGDGTNDAPALKEAD+GLSMGIQGT
Sbjct: 708 RMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGT 767
Query: 790 EVAKESSDIVILDDDFTSVATVLSPG 815
EVAKESSDI+ILDD+F SVATVL G
Sbjct: 768 EVAKESSDIIILDDNFASVATVLRWG 793
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356573611|ref|XP_003554951.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1063 bits (2749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/812 (66%), Positives = 642/812 (79%), Gaps = 28/812 (3%)
Query: 15 LINVTTSTLTKAQKRWRLAYWTIYSFRAMLS--VLPKGRLLSAE------ILTSHDYIAL 66
L+N T++ + KRW A+ IY RA++S L K A+ + + +
Sbjct: 15 LLNAPNPTVSASIKRWHSAFMAIYCSRAIMSHSTLKKPNKTKAKASPSPTPTPTPSFTVV 74
Query: 67 DVEPEPSSSHDEANKLVSNSIDPDMDGIRLAEMVKNKDSHTLSLLGGVEGVANALGTNPE 126
D+ P S D+D L ++VK K+ L GGVEGVA AL T+ E
Sbjct: 75 DLNPHHSF---------------DIDQTALTDIVKEKELENLDRFGGVEGVAKALQTHVE 119
Query: 127 YGINGND---EDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFG 183
YGI G D ED++RR Q+FG+NTYHKPP KG HFV+EAFKD TILIL+VCAALSLGFG
Sbjct: 120 YGIKGGDDDAEDITRRRQVFGSNTYHKPPSKGFFHFVVEAFKDVTILILMVCAALSLGFG 179
Query: 184 IKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQ 243
IKEHG +EGWY+GGSIFVAVF+VI +SA SNFRQ RQFDKLS++SN+I+++VVR RR
Sbjct: 180 IKEHGIKEGWYDGGSIFVAVFIVISLSAVSNFRQNRQFDKLSQVSNDIQIDVVRSGRRQN 239
Query: 244 ISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGS 303
+SIF++VVGD++ LKIGDQ+PADGLF++GHSL+VDE+SMTGESDHVE+ N+PFLFSG+
Sbjct: 240 VSIFEIVVGDVICLKIGDQVPADGLFIEGHSLKVDEASMTGESDHVEISRQNHPFLFSGT 299
Query: 304 KVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVL 363
KVADGYA+MLV SVGMNT WG+MMSSIS D +E TPLQ RL+KLTS+IGKVGLAVAFLVL
Sbjct: 300 KVADGYAKMLVTSVGMNTTWGQMMSSISQDIDEETPLQERLNKLTSSIGKVGLAVAFLVL 359
Query: 364 VVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTL 423
VVLL RYFTGNTK E GIKE+NGS T DD+ NAVV IVA AVTIVVVAIPEGLPLAVTL
Sbjct: 360 VVLLVRYFTGNTKDETGIKEFNGSRTKFDDIMNAVVGIVADAVTIVVVAIPEGLPLAVTL 419
Query: 424 TLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQET 483
TLAYSMK+MM DQAMVRKL ACETMGSAT ICTDKTGTLTLN+MKVTK WLG E +++
Sbjct: 420 TLAYSMKKMMADQAMVRKLSACETMGSATTICTDKTGTLTLNEMKVTKVWLGLEPVLESA 479
Query: 484 YCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKV 543
Y K+A + L +GV LNTTGSV K S EFSGSPTEKA+LSWAVLE+ MEM+ +
Sbjct: 480 YTKVAPFVLQLIQEGVALNTTGSVHKSNKSGSEFEFSGSPTEKAILSWAVLELNMEMENL 539
Query: 544 KQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMD 603
+ SI+HVETFNS+KKRSGVL+RRK DNT + HWKGAAE++L MCS YY+++G++K +D
Sbjct: 540 TRSCSIIHVETFNSKKKRSGVLLRRKVDNTVNAHWKGAAEMVLKMCSRYYDASGIVKDLD 599
Query: 604 GNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIK 663
+ + E+II GMA+SSLRCIAFA+ +V+EEE + + A ++KE GLTLLG+VGIK
Sbjct: 600 NDRMLKFEHIIQGMASSSLRCIAFAHVEVAEEELV-DEEGNAMAKVKENGLTLLGLVGIK 658
Query: 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFR 723
DPCR GV+ AVEACQ+AGV IKMITGDNVFTAKAIATECGILR +Q + G V+EG EFR
Sbjct: 659 DPCRQGVKNAVEACQNAGVNIKMITGDNVFTAKAIATECGILRPNQDTD-GAVIEGEEFR 717
Query: 724 NYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLS 783
NYT EER++KV+KI VMARSSPFDKLLMVQCLK+KGHVVAVTGDGTNDAPALKEAD+GLS
Sbjct: 718 NYTHEERLEKVEKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLS 777
Query: 784 MGIQGTEVAKESSDIVILDDDFTSVATVLSPG 815
MGIQGTEVAKESSDIVILDD+F SV TVL G
Sbjct: 778 MGIQGTEVAKESSDIVILDDNFASVVTVLRWG 809
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432840|ref|XP_002279888.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1063 bits (2749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/815 (69%), Positives = 661/815 (81%), Gaps = 21/815 (2%)
Query: 1 MSDTKIPRYNCSTLLINVTTSTLTKAQKRWRLAYWTIYSFRAMLSVLPKGRLLSAEILTS 60
MS+ NC T ++++ T TL+K KRW A+ TIY FRA+ S+L K + S +++
Sbjct: 1 MSNILHVNLNCITPILDLPT-TLSKPNKRWHSAFATIYCFRALHSLLNKKKNSSKVPIST 59
Query: 61 HDYIALDVEPEPSSSHDEANKLVSNSIDPDMDGIRLAEMVKNKDSHTLSLLGGVEGVANA 120
++ L+V+P+ SS D+ L +VK K+ + L GGVEGVA+A
Sbjct: 60 PSFVVLNVKPDAFSSIDQTT---------------LNAIVKGKNLNLLLESGGVEGVADA 104
Query: 121 LGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSL 180
L T+ + GI+G +DV+ R + FG+NTY +PP K L HFV+EAFKD TILILL CAALSL
Sbjct: 105 LETDIKNGISGAVDDVALRQEAFGSNTYKRPPAKSLFHFVVEAFKDVTILILLFCAALSL 164
Query: 181 GFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREAR 240
GFGIKEHG +EGWY+GGSIFVAV LVI VSA SNFRQ RQF+KLSK+SNNIKV+V R R
Sbjct: 165 GFGIKEHGLKEGWYDGGSIFVAVILVISVSAVSNFRQNRQFEKLSKVSNNIKVDVFRNGR 224
Query: 241 RLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLF 300
R QISIF++VVGD+V LKIGDQ+PADGLFLDGHSLQVDESSMTGESDHVEV+S++NPFLF
Sbjct: 225 RQQISIFEIVVGDVVSLKIGDQVPADGLFLDGHSLQVDESSMTGESDHVEVNSSHNPFLF 284
Query: 301 SGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAF 360
SG+KVADGYAQMLV SVGMNT WG+MMS+IS D+NE+TPLQARL+KLTS+IGK GLAVAF
Sbjct: 285 SGTKVADGYAQMLVTSVGMNTTWGQMMSTISRDTNEQTPLQARLNKLTSSIGKAGLAVAF 344
Query: 361 LVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLA 420
LVLVVLL RYFTGNT+ ENG +E+NGS T DD+ NAVV+I+AAAVTIVVVAIPEGLPLA
Sbjct: 345 LVLVVLLVRYFTGNTEDENGNQEFNGSKTKADDIVNAVVAIIAAAVTIVVVAIPEGLPLA 404
Query: 421 VTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIV 480
VTLTLAYSMKRMM DQAMVRKL ACETMGSAT ICTDKTGTLT+NQMKVTK WLGQE I
Sbjct: 405 VTLTLAYSMKRMMADQAMVRKLSACETMGSATTICTDKTGTLTMNQMKVTKIWLGQEPI- 463
Query: 481 QETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEM 540
E I++++ +L QGV LNTTGSV K GSS EFSGSPTEKA+LSWAVLE+ M+M
Sbjct: 464 -EVSSSISTNLLNLIQQGVALNTTGSVYKASSGSSKFEFSGSPTEKAILSWAVLELDMDM 522
Query: 541 DKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIK 600
+ +KQ +ILHVE FNSEKKRSGVL+R KAD+T ++HWKGAAE+ILAMCS YY+++G K
Sbjct: 523 EILKQNCTILHVEAFNSEKKRSGVLVRSKADDTINVHWKGAAEMILAMCSSYYDASGSTK 582
Query: 601 SMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIV 660
MD R E II GMAASSLRCIAFA+KQ+ EE+ +A Q+LKE+GLTL+G+V
Sbjct: 583 DMDDGERMTFEQIIQGMAASSLRCIAFAHKQIPEEKHEIR---EATQKLKEDGLTLIGLV 639
Query: 661 GIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGV 720
GIKDPCRPGV+KAVE CQ AGV +KMITGDNVFTA+AIATECGILR DQ ++ VVEG
Sbjct: 640 GIKDPCRPGVRKAVEDCQYAGVNVKMITGDNVFTARAIATECGILRPDQGIDNEAVVEGE 699
Query: 721 EFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADV 780
FR YT EER++KVDKIRVMARSSPFDKLLMVQCLK+KGHVVAVTGDGTNDAPALKEAD+
Sbjct: 700 VFRKYTPEERMEKVDKIRVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADI 759
Query: 781 GLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPG 815
GLSMGIQGTEVAK+SSDI+ILDD+F SVATVL G
Sbjct: 760 GLSMGIQGTEVAKQSSDIIILDDNFASVATVLRWG 794
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 825 | ||||||
| TAIR|locus:2087363 | 1033 | AT3G63380 [Arabidopsis thalian | 0.966 | 0.771 | 0.669 | 1.2e-278 | |
| TAIR|locus:2084578 | 1017 | AT3G22910 [Arabidopsis thalian | 0.930 | 0.755 | 0.609 | 2.9e-245 | |
| TAIR|locus:2175579 | 1074 | ACA8 ""autoinhibited Ca2+ -ATP | 0.871 | 0.669 | 0.5 | 3.2e-184 | |
| TAIR|locus:2123924 | 1069 | ACA10 "autoinhibited Ca(2+)-AT | 0.875 | 0.675 | 0.489 | 2e-182 | |
| TAIR|locus:2094726 | 1086 | ACA9 "autoinhibited Ca(2+)-ATP | 0.88 | 0.668 | 0.498 | 4.8e-181 | |
| TAIR|locus:2059201 | 1015 | ACA7 "auto-regulated Ca2+-ATPa | 0.471 | 0.383 | 0.454 | 2.8e-137 | |
| TAIR|locus:2029794 | 1020 | ACA1 "autoinhibited Ca2+-ATPas | 0.847 | 0.685 | 0.421 | 7.4e-137 | |
| DICTYBASE|DDB_G0289473 | 1077 | DDB_G0289473 "Ca2+-ATPase" [Di | 0.493 | 0.377 | 0.371 | 2.4e-123 | |
| TAIR|locus:2062673 | 1030 | ACA4 ""autoinhibited Ca(2+)-AT | 0.741 | 0.594 | 0.384 | 5e-115 | |
| UNIPROTKB|F1SPZ4 | 1094 | ATP2B1 "Plasma membrane calciu | 0.482 | 0.363 | 0.401 | 6.3e-115 |
| TAIR|locus:2087363 AT3G63380 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2678 (947.8 bits), Expect = 1.2e-278, P = 1.2e-278
Identities = 547/817 (66%), Positives = 633/817 (77%)
Query: 1 MSDTKIPRYNCSTLLINVTTSTLTKAQKRWRLAYWTIYSFRAMLSVLPKGRLLSAEI--L 58
M D K Y+ S LL+N+TTS+L KAQ+RWR AY IYS RAMLS++ + ++ A I
Sbjct: 1 MRDLK--EYDYSALLLNLTTSSLNKAQRRWRFAYAAIYSMRAMLSLVKE--IVPARIDPK 56
Query: 59 TSHDYIALDVEPEPSSSHDEANKLVSNSIDPDMDGIRLAEMVKNKDSHTLSLLGGVEGVA 118
TS ++L S + N + + + P +D +L E++K KD + LGGVEGVA
Sbjct: 57 TSDASLSLSYTALESGEGAKINSMPLSYV-PAIDQEQLVEIMKGKDLPGIQALGGVEGVA 115
Query: 119 NALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAAL 178
+L TNP GI+GN+++VSRR LFG+NTYHKPPPKGLL FV EAFKD TILILLVCA
Sbjct: 116 ASLRTNPTKGIHGNEQEVSRRRDLFGSNTYHKPPPKGLLFFVYEAFKDLTILILLVCAIF 175
Query: 179 SLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVRE 238
SLGFGIKEHG +EGWYEGGSIFVAVFLVIVVSA SNFRQ RQFDKLSKISNNIKVEV+R+
Sbjct: 176 SLGFGIKEHGIKEGWYEGGSIFVAVFLVIVVSALSNFRQERQFDKLSKISNNIKVEVLRD 235
Query: 239 ARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPF 298
+RR ISIFD+VVGD+VFLKIGDQIPADGLFL+GHSLQVDESSMTGESDH+EVD +NPF
Sbjct: 236 SRRQHISIFDVVVGDVVFLKIGDQIPADGLFLEGHSLQVDESSMTGESDHLEVDHKDNPF 295
Query: 299 LFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKXXXXX 358
LFSG+K+ DG+AQMLVVSVGM+T WG+ MSSI+ DS+ERTPLQ RLD LTSTIGK
Sbjct: 296 LFSGTKIVDGFAQMLVVSVGMSTTWGQTMSSINQDSSERTPLQVRLDTLTSTIGKIGLTV 355
Query: 359 XXXXXXXXXXRYFTGNTKGENGIKEYNGSNTDIDDVFNXXXXXXXXXXXXXXXXXPEGLP 418
RYFTGNT+ E G +EYNGS T +D V N PEGLP
Sbjct: 356 AALVLVVLLVRYFTGNTEKE-GKREYNGSKTPVDTVVNSVVRIVAAAVTIVVVAIPEGLP 414
Query: 419 LAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQES 478
LAVTLTLAYSMKRMM+DQAMVRKL ACETMGSATVICTDKTGTLTLN+MKVTKFWLGQES
Sbjct: 415 LAVTLTLAYSMKRMMSDQAMVRKLSACETMGSATVICTDKTGTLTLNEMKVTKFWLGQES 474
Query: 479 IVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGM 538
I +++ I+ + DL +QG GLNTTGSV GS+ EFSGSPTEKA+LSW VL +GM
Sbjct: 475 IHEDSTKMISPDVLDLLYQGTGLNTTGSVCVSDSGST-PEFSGSPTEKALLSWTVLNLGM 533
Query: 539 EMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGV 598
+M+ VKQK+ +L VETF+S KKRSGVL+RRK+DNT H+HWKGAAE++LAMCSHYY S G
Sbjct: 534 DMESVKQKHEVLRVETFSSAKKRSGVLVRRKSDNTVHVHWKGAAEMVLAMCSHYYTSTGS 593
Query: 599 IKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLG 658
+ MD +S+++ II GMAASSLRCIAFA+K S N+ V L+E+GLTL+G
Sbjct: 594 VDLMDSTAKSRIQAIIQGMAASSLRCIAFAHKIAS------NDSV-----LEEDGLTLMG 642
Query: 659 IVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQXXXXXXXX 718
IVG+KDPCRPGV KAVE C+ AGV IKMITGDNVFTAKAIA ECGIL + +
Sbjct: 643 IVGLKDPCRPGVSKAVETCKLAGVTIKMITGDNVFTAKAIAFECGILDHNDKDEEDAVVE 702
Query: 719 XXXFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEA 778
FRNYTDEER+QKVDKIRVMARSSP DKLLMV+CL+ KGHVVAVTGDGTNDAPALKEA
Sbjct: 703 GVQFRNYTDEERMQKVDKIRVMARSSPSDKLLMVKCLRLKGHVVAVTGDGTNDAPALKEA 762
Query: 779 DVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPG 815
D+GLSMGIQGTEVAKESSDIVILDD+F SVATVL G
Sbjct: 763 DIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWG 799
|
|
| TAIR|locus:2084578 AT3G22910 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2363 (836.9 bits), Expect = 2.9e-245, P = 2.9e-245
Identities = 485/796 (60%), Positives = 580/796 (72%)
Query: 22 TLTKAQKRWRLAYWTIYSFRAMLSVLPKGRLLSAEILTSHDYIALDVEPEPSSSHDEANK 81
TL+K+ K+W+LA +Y R +L+ S Y A+D++ H +
Sbjct: 26 TLSKSNKKWQLALIKLYCSRTLLNCAKHAIRKPGLFPRSLSYTAIDLDHHHGDDHFK--- 82
Query: 82 LVSNSIDPDMDGIRLAEMVKNKDSHTLSLLGGVEGVANALGTNPEYGINGNDEDVSRRSQ 141
ID + L ++VKNK+ L LGG G+ +AL +N GIN +++ RR
Sbjct: 83 -----IDTET----LNDLVKNKNQEKLESLGGPNGLVSALKSNTRLGINEEGDEIQRRRS 133
Query: 142 LFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFV 201
FG+NTY + P KGL HFV+EAFKD TILILL CA LSLGFGIKEHG +EGWY+GGSIFV
Sbjct: 134 TFGSNTYTRQPSKGLFHFVVEAFKDLTILILLGCATLSLGFGIKEHGLKEGWYDGGSIFV 193
Query: 202 AVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGD 261
AVFLV+ VSA SNFRQ RQFDKLSK+S+NIK++VVR RR +ISIFD+VVGDIV L IGD
Sbjct: 194 AVFLVVAVSAVSNFRQNRQFDKLSKVSSNIKIDVVRNGRRQEISIFDIVVGDIVCLNIGD 253
Query: 262 QIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNT 321
Q+PADG+F++GH L VDESSMTGESDHVEV T N FLFSG+K+ADG+ +M V SVGMNT
Sbjct: 254 QVPADGVFVEGHLLHVDESSMTGESDHVEVSLTGNTFLFSGTKIADGFGKMAVTSVGMNT 313
Query: 322 AWGEMMSSISSDSNERTPLQARLDKLTSTIGKXXXXXXXXXXXXXXXRYFTGNTKGENGI 381
AWG+MMS IS D+NE+TPLQ+RLDKLTS+IGK RYFTG TK E+G
Sbjct: 314 AWGQMMSHISRDTNEQTPLQSRLDKLTSSIGKVGLLVAFLVLLVLLIRYFTGTTKDESGN 373
Query: 382 KEYNGSNTDIDDVFNXXXXXXXXXXXXXXXXXPEGLPLAVTLTLAYSMKRMMTDQAMVRK 441
+EYNG T D++ N PEGLPLAVTLTLAYSMKRMM D AMVRK
Sbjct: 374 REYNGKTTKSDEIVNAVVKMVAAAVTIIVVAIPEGLPLAVTLTLAYSMKRMMKDNAMVRK 433
Query: 442 LPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGL 501
L ACETMGSATVICTDKTGTLTLNQMKVT FW G ES + ++ + +LFHQGV +
Sbjct: 434 LSACETMGSATVICTDKTGTLTLNQMKVTDFWFGLESGKASS---VSQRVVELFHQGVAM 490
Query: 502 NTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKR 561
NTTGSV K K G+ EFSGSPTEKA+LSWAV E+ M M+KV +++ ++HVE FNSEKKR
Sbjct: 491 NTTGSVFKAKAGTEY-EFSGSPTEKAILSWAVEELEMGMEKVIEEHDVVHVEGFNSEKKR 549
Query: 562 SGVLIRRKADNTTH--IHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAA 619
SGVL+++K NT + +HWKGAAE ILAMCS + + +GV++ M + + Q E II MAA
Sbjct: 550 SGVLMKKKGVNTENNVVHWKGAAEKILAMCSTFCDGSGVVREMKEDDKIQFEKIIQSMAA 609
Query: 620 SSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQS 679
SLRCIAFAY SE+ N D K +LKEE L+LLGI+GIKDPCRPGV+KAVE CQ
Sbjct: 610 KSLRCIAFAY---SED----NEDNK---KLKEEKLSLLGIIGIKDPCRPGVKKAVEDCQF 659
Query: 680 AGVEIKMITGDNVFTAKAIATECGILRLDQQXXXXXXXXXXXFRNYTDEERIQKVDKIRV 739
AGV IKMITGDN+FTA+AIA ECGIL + + FRNYT EER++KV++I+V
Sbjct: 660 AGVNIKMITGDNIFTARAIAVECGILTPEDEMNSEAVLEGEKFRNYTQEERLEKVERIKV 719
Query: 740 MARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIV 799
MARSSPFDKLLMV+CLK+ GHVVAVTGDGTNDAPALKEAD+GLSMGIQGTEVAKESSDIV
Sbjct: 720 MARSSPFDKLLMVKCLKELGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIV 779
Query: 800 ILDDDFTSVATVLSPG 815
ILDD+F SVATVL G
Sbjct: 780 ILDDNFASVATVLKWG 795
|
|
| TAIR|locus:2175579 ACA8 ""autoinhibited Ca2+ -ATPase, isoform 8"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1787 (634.1 bits), Expect = 3.2e-184, P = 3.2e-184
Identities = 363/726 (50%), Positives = 484/726 (66%)
Query: 95 RLAEMVKNKDSHTLSLLGGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPK 154
+L M K+ +S L GG +G+AN L TNPE GI+G+D+D+ +R ++G+NTY + K
Sbjct: 120 QLVIMSKDHNSGALEQYGGTQGLANLLKTNPEKGISGDDDDLLKRKTIYGSNTYPRKKGK 179
Query: 155 GLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSN 214
G L F+ +A D T++IL+V A SL GIK G +EGWY+GGSI AV LVIVV+A S+
Sbjct: 180 GFLRFLWDACHDLTLIILMVAAVASLALGIKTEGIKEGWYDGGSIAFAVILVIVVTAVSD 239
Query: 215 FRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHS 274
++Q+ QF L+ NI +EV+R RR++ISI+D+VVGD++ L IG+Q+PADG+ + GHS
Sbjct: 240 YKQSLQFQNLNDEKRNIHLEVLRGGRRVEISIYDIVVGDVIPLNIGNQVPADGVLISGHS 299
Query: 275 LQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDS 334
L +DESSMTGES V D+ +PFL SG KVADG MLV VG+NT WG +M+SIS D+
Sbjct: 300 LALDESSMTGESKIVNKDANKDPFLMSGCKVADGNGSMLVTGVGVNTEWGLLMASISEDN 359
Query: 335 NERTPLQARLDKLTSTIGKXXXXXXXXXXXXXXXRYFTGNTKGENGIKEYNGSNTDIDDV 394
E TPLQ RL+ + + IG RYFTG+TK NG ++ T + V
Sbjct: 360 GEETPLQVRLNGVATFIGSIGLAVAAAVLVILLTRYFTGHTKDNNGGPQFVKGKTKVGHV 419
Query: 395 FNXXXXXXXXXXXXXXXXXPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVI 454
+ PEGLPLAVTLTLAYSM++MM D+A+VR+L ACETMGSAT I
Sbjct: 420 IDDVVKVLTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTI 479
Query: 455 CTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGS 514
C+DKTGTLTLNQM V + + G + E ++ ++I L +G+ NTTGS+ + G
Sbjct: 480 CSDKTGTLTLNQMTVVESYAGGKKTDTE---QLPATITSLVVEGISQNTTGSIFVPEGGG 536
Query: 515 SVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTT 574
+ E+SGSPTEKA+L W V ++GM + + + SILH FNSEKKR GV ++ AD
Sbjct: 537 DL-EYSGSPTEKAILGWGV-KLGMNFETARSQSSILHAFPFNSEKKRGGVAVKT-ADGEV 593
Query: 575 HIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSE 634
H+HWKGA+EI+LA C Y + +G + M + S +N I+ MA +LRC+A A++
Sbjct: 594 HVHWKGASEIVLASCRSYIDEDGNVAPMTDDKASFFKNGINDMAGRTLRCVALAFRTYEA 653
Query: 635 EETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFT 694
E+ ++ ++ L E+ L LL IVGIKDPCRPGV+ +V CQ+AGV+++M+TGDNV T
Sbjct: 654 EKVPTGEEL-SKWVLPEDDLILLAIVGIKDPCRPGVKDSVVLCQNAGVKVRMVTGDNVQT 712
Query: 695 AKAIATECGILRLDQQXXXXXXXXXXXFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQC 754
A+AIA ECGIL D FR TD ER + DKI VM RSSP DKLL+VQ
Sbjct: 713 ARAIALECGILSSDADLSEPTLIEGKSFREMTDAERDKISDKISVMGRSSPNDKLLLVQS 772
Query: 755 LKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSP 814
L+++GHVVAVTGDGTNDAPAL EAD+GL+MGI GTEVAKESSDI+ILDD+F SV V+
Sbjct: 773 LRRQGHVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESSDIIILDDNFASVVKVVRW 832
Query: 815 GDQLHS 820
G +++
Sbjct: 833 GRSVYA 838
|
|
| TAIR|locus:2123924 ACA10 "autoinhibited Ca(2+)-ATPase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1770 (628.1 bits), Expect = 2.0e-182, P = 2.0e-182
Identities = 356/727 (48%), Positives = 489/727 (67%)
Query: 95 RLAEMVKNKDSHTLSLLGGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPK 154
++ + ++++ L LGGV G+++ L TN E GI+G+D+D+ +R FG+NTY + +
Sbjct: 120 QIVSISRDQNIGALQELGGVRGLSDLLKTNLEKGIHGDDDDILKRKSAFGSNTYPQKKGR 179
Query: 155 GLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSN 214
FV EA +D T++IL+V A SL GIK G E+GWY+G SI AV LVIVV+A S+
Sbjct: 180 SFWRFVWEASQDLTLIILIVAAVASLALGIKTEGIEKGWYDGISIAFAVLLVIVVTATSD 239
Query: 215 FRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHS 274
+RQ+ QF L++ NI++EV R+ RR++ISI+D+VVGD++ L IGDQ+PADG+ + GHS
Sbjct: 240 YRQSLQFQNLNEEKRNIRLEVTRDGRRVEISIYDIVVGDVIPLNIGDQVPADGVLVAGHS 299
Query: 275 LQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDS 334
L VDESSMTGES V+ +ST +PFL SG KVADG MLV VG+NT WG +M+S+S D+
Sbjct: 300 LAVDESSMTGESKIVQKNSTKHPFLMSGCKVADGNGTMLVTGVGVNTEWGLLMASVSEDN 359
Query: 335 NERTPLQARLDKLTSTIGKXXXXXXXXXXXXXXXRYFTGNTKGENGIKEYNGSNTDIDDV 394
TPLQ RL+ + + IG RYFTG+TK E G ++ G T + V
Sbjct: 360 GGETPLQVRLNGVATFIGIVGLTVAGVVLFVLVVRYFTGHTKNEQGGPQFIGGKTKFEHV 419
Query: 395 FNXXXXXXXXXXXXXXXXXPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVI 454
+ PEGLPLAVTLTLAYSM++MM D+A+VR+L ACETMGSAT I
Sbjct: 420 LDDLVEIFTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTI 479
Query: 455 CTDKTGTLTLNQMKVTKFWLG-QESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPG 513
C+DKTGTLTLN+M V + + G Q+ ++ K+ S+ + +G+ NTTGSV + + G
Sbjct: 480 CSDKTGTLTLNEMTVVECYAGLQKMDSPDSSSKLPSAFTSILVEGIAHNTTGSVFRSESG 539
Query: 514 SSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNT 573
+ SGSPTE+A+L+WA+ ++GM+ D +K + S + FNSEKKR GV ++ D++
Sbjct: 540 E--IQVSGSPTERAILNWAI-KLGMDFDALKSESSAVQFFPFNSEKKRGGVAVK-SPDSS 595
Query: 574 THIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVS 633
HIHWKGAAEI+L C+HY + + M + +++ I MAA SLRC+A A++
Sbjct: 596 VHIHWKGAAEIVLGSCTHYMDESESFVDMSEDKMGGLKDAIDDMAARSLRCVAIAFRTFE 655
Query: 634 EEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVF 693
++ + + +R L E+ L LL IVGIKDPCRPGV+ +V CQ AGV+++M+TGDN+
Sbjct: 656 ADKIPTDEEQLSRWELPEDDLILLAIVGIKDPCRPGVKNSVLLCQQAGVKVRMVTGDNIQ 715
Query: 694 TAKAIATECGILRLDQQXXXXXXXXXXXFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQ 753
TAKAIA ECGIL D FR+Y++EER + ++I VM RSSP DKLL+VQ
Sbjct: 716 TAKAIALECGILASDSDASEPNLIEGKVFRSYSEEERDRICEEISVMGRSSPNDKLLLVQ 775
Query: 754 CLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813
LK++GHVVAVTGDGTNDAPAL EAD+GL+MGIQGTEVAKE SDI+ILDD+F SV V+
Sbjct: 776 SLKRRGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKEKSDIIILDDNFESVVKVVR 835
Query: 814 PGDQLHS 820
G +++
Sbjct: 836 WGRSVYA 842
|
|
| TAIR|locus:2094726 ACA9 "autoinhibited Ca(2+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1757 (623.6 bits), Expect = 4.8e-181, P = 4.8e-181
Identities = 365/732 (49%), Positives = 478/732 (65%)
Query: 90 DMDGIRLAEMVKNKDSHTLSLLGGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYH 149
D+D +L M +N++ L GGV+GVA L +N E GIN ++++V R FG+NTY
Sbjct: 129 DIDLEKLVSMTRNQNMSNLQQYGGVKGVAEKLKSNMEQGINEDEKEVIDRKNAFGSNTYP 188
Query: 150 KPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVV 209
K K F+ EA++D T++IL++ A SL GIK G +EGW +GGSI AV LVIVV
Sbjct: 189 KKKGKNFFMFLWEAWQDLTLIILIIAAVTSLALGIKTEGLKEGWLDGGSIAFAVLLVIVV 248
Query: 210 SAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLF 269
+A S++RQ+ QF L+ NI++EV+R R ++ISI+D+VVGD++ L+IGDQ+PADG+
Sbjct: 249 TAVSDYRQSLQFQNLNDEKRNIQLEVMRGGRTVKISIYDVVVGDVIPLRIGDQVPADGVL 308
Query: 270 LDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSS 329
+ GHSL +DESSMTGES V D +PFL SG KVADG MLV VG+NT WG +M+S
Sbjct: 309 ISGHSLAIDESSMTGESKIVHKDQ-KSPFLMSGCKVADGVGNMLVTGVGINTEWGLLMAS 367
Query: 330 ISSDSNERTPLQARLDKLTSTIGKXXXXXXXXXXXXXXXRYFTGNTKGENGIKEYNGSNT 389
IS D+ E TPLQ RL+ L + IG RYFTG T+ NG ++ T
Sbjct: 368 ISEDTGEETPLQVRLNGLATFIGIVGLSVALVVLVALLVRYFTGTTQDTNGATQFIKGTT 427
Query: 390 DIDDVFNXXXXXXXXXXXXXXXXXPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMG 449
I D+ + PEGLPLAVTLTLAYSM++MM D+A+VR+L ACETMG
Sbjct: 428 SISDIVDDCVKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMG 487
Query: 450 SATVICTDKTGTLTLNQMKVTKFWLGQESI-VQETYCKIASSIRDLFHQGVGLNTTGSVS 508
SAT IC+DKTGTLTLNQM V + + G + V + + + L +GV NTTG++
Sbjct: 488 SATTICSDKTGTLTLNQMTVVETYAGGSKMDVADNPSGLHPKLVALISEGVAQNTTGNIF 547
Query: 509 KLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRR 568
K G V E SGSPTEKA+LSWA ++GM+ D ++ + +I+H FNSEKKR GV + R
Sbjct: 548 HPKDGGEV-EISGSPTEKAILSWAY-KLGMKFDTIRSESAIIHAFPFNSEKKRGGVAVLR 605
Query: 569 KADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFA 628
D+ IHWKGAAEI+LA C+ Y +SNG ++S++ + I MA +SLRC+A A
Sbjct: 606 -GDSEVFIHWKGAAEIVLACCTQYMDSNGTLQSIESQ-KEFFRVAIDSMAKNSLRCVAIA 663
Query: 629 YKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMIT 688
+ + + + L E+ L LL IVGIKDPCRPGV++AV C SAGV+++M+T
Sbjct: 664 CRTQELNQVPKEQEDLDKWALPEDELILLAIVGIKDPCRPGVREAVRICTSAGVKVRMVT 723
Query: 689 GDNVFTAKAIATECGILRLDQQXXXXXXXXXXXFRNYTDEERIQKVDKIRVMARSSPFDK 748
GDN+ TAKAIA ECGIL D + FR +++ER Q KI VM RSSP DK
Sbjct: 724 GDNLQTAKAIALECGILSSDTEAVEPTIIEGKVFRELSEKEREQVAKKITVMGRSSPNDK 783
Query: 749 LLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSV 808
LL+VQ L+K G VVAVTGDGTNDAPAL EAD+GLSMGI GTEVAKESSDI+ILDD+F SV
Sbjct: 784 LLLVQALRKNGDVVAVTGDGTNDAPALHEADIGLSMGISGTEVAKESSDIIILDDNFASV 843
Query: 809 ATVLSPGDQLHS 820
V+ G +++
Sbjct: 844 VKVVRWGRSVYA 855
|
|
| TAIR|locus:2059201 ACA7 "auto-regulated Ca2+-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 819 (293.4 bits), Expect = 2.8e-137, Sum P(2) = 2.8e-137
Identities = 188/414 (45%), Positives = 254/414 (61%)
Query: 414 PEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFW 473
PEGLPLAVTL+LA++MK+MM D+A+VR L ACETMGSAT IC+DKTGTLT N M V K
Sbjct: 412 PEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKSC 471
Query: 474 LGQESIVQETYCKIASSIRDLFHQGVGL-------NTTGSVSKLKPGSSVAEFSGSPTEK 526
+ VQ+ K +S D+ + L NT G V + G + E G+PTE
Sbjct: 472 ICMN--VQDVASKSSSLQSDIPEAALKLLLQLIFNNTGGEVVVNERGKT--EILGTPTET 527
Query: 527 AVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIIL 586
A+L L +G + + +Q ++ VE FNS KKR GV+I H KGA+EI+L
Sbjct: 528 AILELG-LSLGGKFQEERQSNKVIKVEPFNSTKKRMGVVIELPEGGRIRAHTKGASEIVL 586
Query: 587 AMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKAR 646
A C S+G + +D + I A +LR + AY + E+ ++ D
Sbjct: 587 AACDKVINSSGEVVPLDDESIKFLNVTIDEFANEALRTLCLAYMDI---ESGFSAD---- 639
Query: 647 QRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILR 706
+ + E+G T +GIVGIKDP RPGV+++VE C+ AG+ ++M+TGDN+ TAKAIA ECGIL
Sbjct: 640 EGIPEKGFTCIGIVGIKDPVRPGVRESVELCRRAGIMVRMVTGDNINTAKAIARECGILT 699
Query: 707 LDQQXXXXXXXXXXXFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKK-GHVVAVT 765
D FR EE ++ + KI+VMARSSP DK +V+ L+ VVAVT
Sbjct: 700 DD-----GIAIEGPVFREKNQEEMLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVAVT 754
Query: 766 GDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLH 819
GDGTNDAPAL EAD+GL+MGI GTEVAKE +D++ILDD+F+++ TV G ++
Sbjct: 755 GDGTNDAPALHEADIGLAMGIAGTEVAKEIADVIILDDNFSTIVTVAKWGRSVY 808
|
|
| TAIR|locus:2029794 ACA1 "autoinhibited Ca2+-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1340 (476.8 bits), Expect = 7.4e-137, P = 7.4e-137
Identities = 309/733 (42%), Positives = 441/733 (60%)
Query: 96 LAEMVKNKDSHTLSLLGGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKG 155
L +V+ D L + GG EG+ L T+ GI+ +++ +S R +++G N + + P +G
Sbjct: 103 LGSIVEGHDLKKLKIHGGTEGLTEKLSTSIASGISTSEDLLSVRKEIYGINQFTESPSRG 162
Query: 156 LLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNF 215
FV EA +DTT++IL CA +SL GI G G ++G I ++ LV+ V+A S++
Sbjct: 163 FWLFVWEALQDTTLMILAACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDY 222
Query: 216 RQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSL 275
RQ+ QF L I V+V R+ R +ISI+DL+ GD+V L IGDQIPADGLF+ G S+
Sbjct: 223 RQSLQFKDLDAEKKKIVVQVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSV 282
Query: 276 QVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSN 335
++ESS+TGES+ V V S +PFL SG+KV DG +MLV +VGM T WG++M+++S +
Sbjct: 283 LINESSLTGESEPVSV-SVEHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGD 341
Query: 336 ERTPLQARLDKLTSTIGKXXXXXXXXXXXXXXXRYFTGNTKGENGIKEYNGSNTD-IDDV 394
+ TPLQ +L+ + + IGK F +G K + S+ D
Sbjct: 342 DETPLQVKLNGVATIIGKIGLFFAVIT--------FAVLVQGLANQKRLDNSHWIWTADE 393
Query: 395 FNXXXXXXXXXXXXXXXXXPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVI 454
PEGLPLAVTL+LA++MK+MM D+A+VR L ACETMGSAT I
Sbjct: 394 LMAMLEYFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRNLAACETMGSATTI 453
Query: 455 CTDKTGTLTLNQMKVTKFWL---GQESIVQETYCKIASSIRD----LFHQGVGLNTTGSV 507
C+DKTGTLT N M V K + +E + K AS I + L Q + NT G +
Sbjct: 454 CSDKTGTLTTNHMTVVKACICEQAKEVNGPDAAMKFASGIPESAVKLLLQSIFTNTGGEI 513
Query: 508 SKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIR 567
K G+ E G+PTE A+L + L +G + +V+Q +++ VE FNS KKR GV+I
Sbjct: 514 VVGK-GNKT-EILGTPTETALLEFG-LSLGGDFQEVRQASNVVKVEPFNSTKKRMGVVIE 570
Query: 568 RKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAF 627
+ H KGA+EI+L C Y +G + +D S ++NII A+ +LR +
Sbjct: 571 LP-ERHFRAHCKGASEIVLDSCDKYINKDGEVVPLDEKSTSHLKNIIEEFASEALRTLCL 629
Query: 628 AYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMI 687
AY ++ +E + ++A + G T +GIVGIKDP RPGV+++V C+SAG+ ++M+
Sbjct: 630 AYFEIGDEFS-----LEAP--IPSGGYTCIGIVGIKDPVRPGVKESVAICKSAGITVRMV 682
Query: 688 TGDNVFTAKAIATECGILRLDQQXXXXXXXXXXXFRNYTDEERIQKVDKIRVMARSSPFD 747
TGDN+ TAKAIA ECGIL D FR +DEE ++ + K++VMARSSP D
Sbjct: 683 TGDNLTTAKAIARECGILTDD-----GIAIEGPEFREKSDEELLKLIPKLQVMARSSPMD 737
Query: 748 KLLMVQCLKKK-GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFT 806
K +V+ L+ VVAVTGDGTNDAPAL EAD+GL+MGI GTEVAKES+D++ILDD+F+
Sbjct: 738 KHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISGTEVAKESADVIILDDNFS 797
Query: 807 SVATVLSPGDQLH 819
++ TV G ++
Sbjct: 798 TIVTVAKWGRSVY 810
|
|
| DICTYBASE|DDB_G0289473 DDB_G0289473 "Ca2+-ATPase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 676 (243.0 bits), Expect = 2.4e-123, Sum P(2) = 2.4e-123
Identities = 157/423 (37%), Positives = 234/423 (55%)
Query: 78 EANKLVSNSIDPDMDGIRLAEMVKNKDSHTLSL-LGGVEGVANALGTNPEYGINGNDEDV 136
+ N + ID + L+ V+ +D + GGV G++ LG+N E G++ +
Sbjct: 6 DINNNNNGGIDYSITNEELSGYVQEEDYEAIKQRYGGVSGLSKRLGSNEENGLSQQEATN 65
Query: 137 SRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEG 196
R FG N ++ K L F+ +A D T++IL+V A +S+ G+ + GW +G
Sbjct: 66 EERIHRFGINKMNEIAQKSLFFFIWQAIHDKTLIILIVSAVVSIILGLTVEDRKTGWIDG 125
Query: 197 GSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVF 256
+I VAV +V++V+A +++ + ++F KL+ I N V VVR IS++D+VVGD+V
Sbjct: 126 TAILVAVIIVVLVTAGNDYNKEKKFRKLNTIRNERNVSVVRGGHLASISVYDVVVGDVVK 185
Query: 257 LKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVS 316
L+ GD IPADGL++ G S+ VDESSMTGESD S + PF SG +V +G A MLV++
Sbjct: 186 LETGDTIPADGLYIAGQSIAVDESSMTGESDQKR-KSNDRPFFLSGCQVLEGSASMLVIA 244
Query: 317 VGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKXXXXXXXXXXXXXXXRYFTGNTK 376
VG N+ WG++ + S ++ TPL +L+KL TIGK +Y K
Sbjct: 245 VGPNSQWGKLKLLLQSPDSD-TPLTQKLEKLAETIGKFGLIAAILTFGVLLLKYVIVFVK 303
Query: 377 GENGIKEYNGSNTDIDDVFNXXXXXXXXXXXXXXXXXPEGLPLAVTLTLAYSMKRMMTDQ 436
+ ++ T + V PEGLPLAVT++LAYSM +MM DQ
Sbjct: 304 -DGHTWHWSELGTIVGFVVTAITIIVVAV--------PEGLPLAVTISLAYSMMKMMKDQ 354
Query: 437 AMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQ----ESIVQETYCKIASSIR 492
+VR L ACETMG AT IC+DKTGTLT N+M V K +G+ + V+ ++ R
Sbjct: 355 NLVRHLEACETMGGATNICSDKTGTLTQNRMTVVKKIIGKSINSDDFVENGKSSMSDQQR 414
Query: 493 DLF 495
D++
Sbjct: 415 DIY 417
|
|
| TAIR|locus:2062673 ACA4 ""autoinhibited Ca(2+)-ATPase, isoform 4"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1134 (404.2 bits), Expect = 5.0e-115, P = 5.0e-115
Identities = 248/645 (38%), Positives = 376/645 (58%)
Query: 66 LDVEPEPSSSHDEANKLVSNSIDPDMDGIRLAEMVKNKDSHTLSLLGGVEGVANALGTNP 125
+D P + K SI+ D LA MV+ D+ +L+ GGVE +A + +
Sbjct: 74 IDAAARPEYKLTDEVKKAGFSIEAD----ELASMVRKNDTKSLAQKGGVEELAKKVSVSL 129
Query: 126 EYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIK 185
GI ++ + R ++FG N Y + P + L FV EA D T++IL+VCA +S+G G+
Sbjct: 130 SEGIRSSEVPI--REKIFGENRYTEKPARSFLMFVWEALHDITLIILMVCAVVSIGVGVA 187
Query: 186 EHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQIS 245
G G Y+G I +++ LV++V+A S+++Q+ QF L + I V+V R+ R +IS
Sbjct: 188 TEGFPRGMYDGTGILLSILLVVMVTAISDYKQSLQFRDLDREKKKIIVQVTRDGSRQEIS 247
Query: 246 IFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKV 305
I DLVVGD+V L IGDQ+PADG+F+ G++L++DESS++GES+ V+ PFL SG+KV
Sbjct: 248 IHDLVVGDVVHLSIGDQVPADGIFISGYNLEIDESSLSGESEPSHVNK-EKPFLLSGTKV 306
Query: 306 ADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKXXXXXXXXXXXX 365
+G A+MLV +VGM T WG++M ++ + TPLQ +L+ + + IGK
Sbjct: 307 QNGSAKMLVTTVGMRTEWGKLMETLVDGGEDETPLQVKLNGVATIIGKIGLSFAVLTFVV 366
Query: 366 XXXRYFTGNTKGENGIKEYNGSNTDIDDVFNXXXXXXXXXXXXXXXXXPEGLPLAVTLTL 425
R+ K +G + +N +D PEGLPLAVTL+L
Sbjct: 367 LCIRFVLD--KATSG----SFTNWSSEDALTLLDYFAISVTIIVVAV-PEGLPLAVTLSL 419
Query: 426 AYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWL------GQESI 479
A++MK++M+D+A+VR L ACETMGS+T ICTDKTGTLT N M V K W+ QE
Sbjct: 420 AFAMKKLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVWICDKVQERQEGS 479
Query: 480 VQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGME 539
+ +++ ++ QG+ NT V K K G++ + GSPTE+A+L + +L +G +
Sbjct: 480 KESFELELSEEVQSTLLQGIFQNTGSEVVKDKDGNT--QILGSPTERAILEFGLL-LGGD 536
Query: 540 MDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVI 599
+ ++++ IL +E FNS+KK+ VLI KGA+EI+L MC + +SNG
Sbjct: 537 FNTQRKEHKILKIEPFNSDKKKMSVLIALPGGGA-RAFCKGASEIVLKMCENVVDSNGES 595
Query: 600 KSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGI 659
+ + + +II G A+ +LR + YK + E + L + G T++ +
Sbjct: 596 VPLTEERITSISDIIEGFASEALRTLCLVYKDLDEAPSG---------ELPDGGYTMVAV 646
Query: 660 VGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGI 704
VGIKDP RPGV++AV+ CQ+AG+ ++M+TGDN+ TAKAIA ECGI
Sbjct: 647 VGIKDPVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGI 691
|
|
| UNIPROTKB|F1SPZ4 ATP2B1 "Plasma membrane calcium-transporting ATPase 1" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 700 (251.5 bits), Expect = 6.3e-115, Sum P(4) = 6.3e-115
Identities = 171/426 (40%), Positives = 248/426 (58%)
Query: 414 PEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFW 473
PEGLPLAVT++LAYS+K+MM D +VR L ACETMG+AT IC+DKTGTLT+N+M V + +
Sbjct: 432 PEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTMNRMTVVQAY 491
Query: 474 LGQESI--VQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSS--VAEFSGSPTEKAVL 529
+ ++ + E I +I G+ +N + L P + G+ TE A+L
Sbjct: 492 INEKHYKKIPEPEA-IPPNILSYLVTGISVNCAYTSKILPPEKEGGLPRHVGNKTECALL 550
Query: 530 SWAVLEMGMEMDKVKQKY---SILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIIL 586
+L++ + V+ + ++ V TFNS +K +++ +D + I KGA+EIIL
Sbjct: 551 G-LLLDLKRDYQDVRNEIPEEALYKVYTFNSVRKSMSTVLKN-SDGSYRIFSKGASEIIL 608
Query: 587 AMCSHYYESNGVIKSMDGNGRSQM-ENIIHGMAASSLR--CIAFAYKQVSEEETAYNNDV 643
C +NG K R + + +I MA+ LR C+AF E E ++N+
Sbjct: 609 KKCFKILSANGEAKVFRPRDRDDIVKTVIEPMASEGLRTICLAFRDFPAGEPEPEWDNEN 668
Query: 644 KARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECG 703
GLT + +VGI+DP RP V A++ CQ AG+ ++M+TGDN+ TA+AIAT+CG
Sbjct: 669 DI-----VTGLTCIAVVGIEDPVRPEVPDAIKKCQRAGITVRMVTGDNINTARAIATKCG 723
Query: 704 ILRLDQQXX-XXXXXXXXXFRNYTDE---ERIQKV-DKIRVMARSSPFDKLLMVQ----- 753
IL + RN E ERI K+ K+RV+ARSSP DK +V+
Sbjct: 724 ILHPGEDFLCLEGKDFNRRIRNEKGEIEQERIDKIWPKLRVLARSSPTDKHTLVKGIIDS 783
Query: 754 CLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813
+ + VVAVTGDGTND PALK+ADVG +MGI GT+VAKE+SDI++ DD+FTS+ +
Sbjct: 784 TVSDQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVM 843
Query: 814 PGDQLH 819
G ++
Sbjct: 844 WGRNVY 849
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9LY77 | ACA12_ARATH | 3, ., 6, ., 3, ., 8 | 0.7079 | 0.9684 | 0.7734 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| gw1.II.3417.1 | autoinhibited calcium ATPase (940 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 825 | |||
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-175 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 1e-116 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 1e-113 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-107 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 1e-85 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 3e-73 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 8e-68 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 1e-66 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 2e-62 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 2e-55 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 1e-46 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 9e-44 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 5e-32 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 4e-30 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 2e-26 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 2e-26 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 4e-26 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 4e-24 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 5e-24 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 2e-23 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 2e-22 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 3e-22 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 5e-22 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 1e-20 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 1e-18 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 9e-18 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 7e-17 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 7e-17 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 5e-15 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 7e-14 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 3e-10 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 1e-09 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 2e-09 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 4e-09 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 4e-09 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 1e-07 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 1e-07 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 5e-07 | |
| TIGR00099 | 256 | TIGR00099, Cof-subfamily, Cof subfamily of IIB sub | 0.001 | |
| COG0561 | 264 | COG0561, Cof, Predicted hydrolases of the HAD supe | 0.003 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 682 bits (1761), Expect = 0.0
Identities = 302/715 (42%), Positives = 435/715 (60%), Gaps = 31/715 (4%)
Query: 100 VKNKDSHTLSLLGGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHF 159
+ + LGG EG+A L T+ G+ + + RR +++G N + PPK L
Sbjct: 31 IFKRAMPLYEKLGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQI 90
Query: 160 VLEAFKDTTILILLVCAALSLGFGIKEHG-----AEEGWYEGGSIFVAVFLVIVVSAFSN 214
V A D T+++L V A +SL G+ E G E GW EG +I V+V LV++V+A ++
Sbjct: 91 VWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVND 150
Query: 215 FRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHS 274
+++ QF +L++ + K+ V+R + QISI D+VVGDIV L GD +PADG+F+ G S
Sbjct: 151 YKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLS 210
Query: 275 LQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDS 334
L++DESS+TGESD ++ +PFL SG+ V +G +MLV +VG+N+ G++M +
Sbjct: 211 LEIDESSITGESDPIKKGPVQDPFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRQAG 270
Query: 335 NERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDV 394
+ TPLQ +L +L IGK G+ A L+ +VL RY +G+ E +
Sbjct: 271 EDSTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQ------- 323
Query: 395 FNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVI 454
+ AVTIVVVA+PEGLPLAVT+ LAYSMK+MM D +VR L ACETMGSAT I
Sbjct: 324 --TFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAI 381
Query: 455 CTDKTGTLTLNQMKVTKFWLG-QESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPG 513
C+DKTGTLT N M V + ++G Q V++ + +R++ +G+ LN++ + G
Sbjct: 382 CSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGG 441
Query: 514 SSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNT 573
F GS TE A+L + +L + + +V+ + ++ + FNSE+K V+++
Sbjct: 442 KR--AFIGSKTECALLDFGLL-LLRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHS-GGK 497
Query: 574 THIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVS 633
KGA+EI+L C +SNG + + + + ++I +A+ +LR I AY+ +
Sbjct: 498 YREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRCADVIEPLASDALRTICLAYRDFA 557
Query: 634 EEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVF 693
EE R+ +GLTL+G+VGIKDP RPGV++AV+ CQ AG+ ++M+TGDN+
Sbjct: 558 PEEF-------PRKDYPNKGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNID 610
Query: 694 TAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQ 753
TAKAIA CGIL G +EG EFR+ EE + K+RV+ARSSP DK L+V
Sbjct: 611 TAKAIARNCGILTFG-----GLAMEGKEFRSLVYEEMDPILPKLRVLARSSPLDKQLLVL 665
Query: 754 CLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSV 808
LK G VVAVTGDGTNDAPALK ADVG SMGI GTEVAKE+SDI++LDD+F S+
Sbjct: 666 MLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASI 720
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 527 bits (1359), Expect = e-175
Identities = 247/711 (34%), Positives = 376/711 (52%), Gaps = 67/711 (9%)
Query: 117 VANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCA 176
+ L T+P G++ +E+V RR + +G N + + LL L FKD I++LLV A
Sbjct: 33 LLLELFTSPTTGLS--EEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAA 90
Query: 177 ALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVV 236
LS G + I + V + ++ +R + + L K+S+ K +V+
Sbjct: 91 LLSAFVGDWVDAGVDAIV----ILLVVVINALLGFVQEYRAEKALEALKKMSSP-KAKVL 145
Query: 237 REARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVE------ 290
R+ + ++I +LV GDIV L+ GD +PAD L+ L+VDES++TGES VE
Sbjct: 146 RDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGESLPVEKQALPL 205
Query: 291 --------VDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQA 342
+D N LFSG+ V G A+ +VV+ G T +G++ + + +TPLQ
Sbjct: 206 TKSDAPLGLDRDN--MLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQR 263
Query: 343 RLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIV 402
+L+KL + + L + LV VV L + G N ++
Sbjct: 264 KLNKLGKFLLVLALVLGALVFVVGL----------------FRGGNG--------LLESF 299
Query: 403 AAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTL 462
A+ + V A+PEGLP VT+ LA +RM D A+VR L A ET+GS VIC+DKTGTL
Sbjct: 300 LTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTL 359
Query: 463 TLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGS 522
T N+M V K ++ ++ K L + SV+ K G A G
Sbjct: 360 TQNKMTVKKIYIN--GGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQA---GD 414
Query: 523 PTEKAVLSWAV-LEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGA 581
PTE A++ +A L +++ ++ +Y IL F+SE+KR V+++ + + KGA
Sbjct: 415 PTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTD-EGKYILFVKGA 473
Query: 582 AEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNN 641
E+IL C G ++ + G +E + +A+ LR +A AYK++ E
Sbjct: 474 PEVILERCKSI----GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEV 529
Query: 642 DVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATE 701
D E L LG+ GI+DP R V++A+E + AG+++ MITGD+V TA AIA E
Sbjct: 530 DEI------ESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKE 583
Query: 702 CGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHV 761
CGI + E V++G E +DEE + V+++ V AR SP K +V+ L+K GHV
Sbjct: 584 CGIE---AEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHV 640
Query: 762 VAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVL 812
VA+TGDG NDAPALK ADVG++MG +GT+ AKE++DIV+LDD+F ++ +
Sbjct: 641 VAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAV 691
|
Length = 917 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 374 bits (961), Expect = e-116
Identities = 233/728 (32%), Positives = 359/728 (49%), Gaps = 89/728 (12%)
Query: 114 VEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAF-KDTTILIL 172
VE + L T+ + G+N + E S R G N + + L L F K+ IL+L
Sbjct: 9 VEETCSKLQTDLQNGLNSSQE-ASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLL 67
Query: 173 LVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIK 232
+ A +S+ G + SI +A+ +V+ V +R + + L+K+ +
Sbjct: 68 IASAVISVFMGNIDDAV--------SITLAILIVVTVGFVQEYRSEKSLEALNKLVPP-E 118
Query: 233 VEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVD 292
++RE + + LV GD+V L +GD++PAD ++ L +DES++TGE+ V
Sbjct: 119 CHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTPVSKV 178
Query: 293 S---TNNPFL---------FSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPL 340
+ F G+ V G+ + +VV G NT +G + + + +TPL
Sbjct: 179 TAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPL 238
Query: 341 QARLDKLTSTIGKVGLAVAFLVL-VVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVV 399
Q +D L GK V+F V+ V+ L +F G D ++F V
Sbjct: 239 QKSMDLL----GKQLSLVSFGVIGVICLVGWFQGK---------------DWLEMFTISV 279
Query: 400 SIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKT 459
S+ V AIPEGLP+ VT+TLA + RM +A+VRKLP+ ET+GS VIC+DKT
Sbjct: 280 SLA-------VAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKT 332
Query: 460 GTLTLNQMKVTKFW--------LGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLK 511
GTLT N M VTK W L S+ Q + + F+ V ++ L
Sbjct: 333 GTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYT-VAVSRILEAGNLC 391
Query: 512 PGSSV----AEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIR 567
+ G+PT+ A++ L M +D +++ Y + F+SE+K V
Sbjct: 392 NNAKFRNEADTLLGNPTDVALIE---LLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCV 448
Query: 568 RKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAF 627
+ D + KGA E +L C++Y + +G ++ R ++ MA++ LR IAF
Sbjct: 449 HRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAF 508
Query: 628 AYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMI 687
A + LT LG+VGI DP RPGV++AV + GV I MI
Sbjct: 509 ASGPEKGQ------------------LTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMI 550
Query: 688 TGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFD 747
TGD+ TA +IA G+ Q GE + D++ Q V K+ V AR+SP
Sbjct: 551 TGDSQETAVSIARRLGMPSKTSQSVSGE-----KLDAMDDQQLSQIVPKVAVFARASPEH 605
Query: 748 KLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTS 807
K+ +V+ L+K+G VVA+TGDG NDAPALK AD+G++MG GT+VAKE++D+++ DDDF +
Sbjct: 606 KMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFAT 665
Query: 808 VATVLSPG 815
+ + + G
Sbjct: 666 ILSAIEEG 673
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 367 bits (944), Expect = e-113
Identities = 231/703 (32%), Positives = 338/703 (48%), Gaps = 72/703 (10%)
Query: 160 VLEAFKDTTILILLVCAALSLGFGIKEHGAE--EGWYEGGSIFVAVFLVIVVSAFSNFRQ 217
VLE F+D + ILL+ A +S E G E + E I + + +V +
Sbjct: 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNA 60
Query: 218 ARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQV 277
+ + L K + +V+R+ R I DLV GDIV L +GD++PAD L +L+V
Sbjct: 61 EKAIEAL-KEYESEHAKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRV 119
Query: 278 DESSMTGESDHVE--VDSTNNP---------FLFSGSKVADGYAQMLVVSVGMNTAWGEM 326
D+S +TGES V +S + LFSG+ V G A+ +VV GM+T G++
Sbjct: 120 DQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKI 179
Query: 327 MSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNG 386
+ + E TPLQ +LD+ + KV + LV V+ + + G
Sbjct: 180 RDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGW------- 232
Query: 387 SNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACE 446
+ AV + V AIPEGLP +T LA ++M A+VRKLP+ E
Sbjct: 233 --------IQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVE 284
Query: 447 TMGSATVICTDKTGTLTLNQMKVTKFWL--GQESIVQE------TYCKIASSIRD----L 494
T+G TVIC+DKTGTLT NQM V K S + E TY I+D
Sbjct: 285 TLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVA 344
Query: 495 FHQGVGLNTTGSVSKLKPGSSVA--------EFSGSPTEKAVLSWAVLEMGMEMDKV--- 543
Q GL +++ L SS+ E G TE A L V +MG+ K
Sbjct: 345 GGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAA-LKVLVEKMGLPATKNGVS 403
Query: 544 -------------KQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCS 590
K+ L F+ ++K VL + N + KGA E +L C+
Sbjct: 404 SKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPSTGNKLFV--KGAPEGVLERCT 461
Query: 591 HYYESNGVIKSMDGNGRSQMENIIHGMAAS-SLRCIAFAYKQVSEEETAYNNDVKARQRL 649
H +G + ++ + ++I M + +LRC+A A+K + + A
Sbjct: 462 HILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEA 521
Query: 650 KEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQ 709
E LT +G+VG+ DP RP V A+E C++AG+ + MITGDN TA+AI GI D+
Sbjct: 522 IESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDE 581
Query: 710 QVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGT 769
V + G EF ++ + +R P K +V+ L+++G +VA+TGDG
Sbjct: 582 DV-TFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGV 640
Query: 770 NDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDF-TSVATV 811
NDAPALK+AD+G++MG GTEVAKE+SD+V+ DD+F T VA V
Sbjct: 641 NDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAV 682
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 340 bits (875), Expect = e-107
Identities = 186/630 (29%), Positives = 284/630 (45%), Gaps = 136/630 (21%)
Query: 198 SIFVAVFLVIVVSAFSNFRQARQFDKLSK-ISNNIKVEVVREARRLQISIFDLVVGDIVF 256
I V + +++ + LS + N V+R + +I DLV GD+V
Sbjct: 1 FILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNGWK-EIPAKDLVPGDVVL 59
Query: 257 LKIGDQIPADGLFLDGHSLQVDESSMTGESDHVE---VDSTNNPFL-----FSGSKVADG 308
+K G+ +PADG+ L G S VDES++TGES+ V + T + + F+G+ V G
Sbjct: 60 VKSGETVPADGVLLSG-SCFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTYVFGG 118
Query: 309 YAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLA 368
++V G+ T G + + + RTPLQ++ D+L + I + L + L + + L
Sbjct: 119 TLIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENFIFILFLLLLALAVFLYLF 178
Query: 369 RYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYS 428
+ A+ ++V+ +P LP AVT+ LA
Sbjct: 179 IRGWDPNSIF---------------------KALLRALIVLVIVVPPALPAAVTVALAVG 217
Query: 429 MKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIA 488
R+ +VR L A E +G +C+DKTGTLT N+M + ++
Sbjct: 218 DARLAKKGILVRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDGGKEDNS------ 271
Query: 489 SSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYS 548
+ L SG P EKA+L A E+ + DK ++Y
Sbjct: 272 -----------SSLVACDNNYL---------SGDPMEKALLKSA--ELVGKADKGNKEYK 309
Query: 549 ILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRS 608
IL V F+S KR V++ D + + KGA E IL C++Y
Sbjct: 310 ILDVFPFSSVLKRMSVIV-ETPDGSDLLFVKGAPEFILERCNNY---------------- 352
Query: 609 QMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRP 668
E +A LR +AFA K++ E+ L LG++ +DP RP
Sbjct: 353 --EEKYLELARQGLRVLAFASKEL------------------EDDLEFLGLITFEDPLRP 392
Query: 669 GVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDE 728
++ +E ++AG+++ MITGDNV TAKAIA E GI
Sbjct: 393 DAKETIEELKAAGIKVVMITGDNVLTAKAIAKELGID----------------------- 429
Query: 729 ERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQG 788
V AR SP KL +V+ L+KKGH+VA+TGDG NDAPALK+ADVG++MG
Sbjct: 430 ----------VFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAMG--- 476
Query: 789 TEVAKESSDIVILDDDFTSVATVLSPGDQL 818
AK ++DIV+LDDD +++ + G ++
Sbjct: 477 ---AKAAADIVLLDDDLSAIVKAVKEGRKI 503
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 293 bits (751), Expect = 1e-85
Identities = 223/780 (28%), Positives = 368/780 (47%), Gaps = 124/780 (15%)
Query: 104 DSHTLSLLGGVEGVANALGTNPEYGINGN--DEDVSRRSQLFGANTYHKPPPKG--LLHF 159
D H LSL + + GT+ G++ E ++R G N PPP + F
Sbjct: 16 DDHKLSL----DELERKYGTDLSKGLSAARAAEILARD----GPNAL-TPPPTTPEWVKF 66
Query: 160 VLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFL---VIVVSAFSNFR 216
+ F ++L+ + L +GI+ + E + ++++ V L VI+ FS ++
Sbjct: 67 CRQLFGGFSMLLWIGAILCFLAYGIQ--ASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQ 124
Query: 217 QARQFDKLSKISNNIKVE--VVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHS 274
+A+ + N + + V+R+ ++ I+ +VVGD+V +K GD+IPAD +
Sbjct: 125 EAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG 184
Query: 275 LQVDESSMTGESD---------HVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGE 325
+VD SS+TGES+ H T N FS + V +G A+ +VV+ G T G
Sbjct: 185 CKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCV-EGTARGIVVNTGDRTVMGR 243
Query: 326 MMSSISSDSNERTPLQARLDKLTSTIGKVG--LAVAFLVLVVLLARYFTGNTKGENGIKE 383
+ S S N +TP+ ++ I V L V+F +L ++L
Sbjct: 244 IASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLIL---------------G 288
Query: 384 YNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLP 443
Y AV+ ++ I+V +PEGL VT+ L + KRM +V+ L
Sbjct: 289 YT--------WLEAVIFLIG----IIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLE 336
Query: 444 ACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNT 503
A ET+GS + IC+DKTGTLT N+M V W + +T D GV +
Sbjct: 337 AVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADT-------TED--QSGVSFDK 387
Query: 504 TG----SVSKLKPGSSVAEF--------------SGSPTEKAVLSWAVLEMGMEMDKVKQ 545
+ ++S++ + A F +G +E A+L L +G M+ ++
Sbjct: 388 SSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRER 447
Query: 546 KYSILHVETFNSEKKRSGVLIRRKADNTTHIH---WKGAAEIILAMCSHYYESNGVIKSM 602
++ + FNS K + I D H KGA E IL CS +G + +
Sbjct: 448 NPKVVEI-PFNSTNKYQ-LSIHENEDPRDPRHLLVMKGAPERILERCSSIL-IHGKEQPL 504
Query: 603 DGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEE--TAYNNDVKARQRLKEEGLTLLGIV 660
D + +N + R + F + + +E+ + D + L +G++
Sbjct: 505 DEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDD-VNFPTDNLCFVGLI 563
Query: 661 GIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGIL------------RLD 708
+ DP R V AV C+SAG+++ M+TGD+ TAKAIA GI+ RL+
Sbjct: 564 SMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLN 623
Query: 709 QQVE-------KGEVVEGVEFRNYTDEERIQKVDKIR------VMARSSPFDKLLMVQCL 755
V K VV G + ++ T E+ +D+I V AR+SP KL++V+
Sbjct: 624 IPVSQVNPRDAKACVVHGSDLKDMTSEQ----LDEILKYHTEIVFARTSPQQKLIIVEGC 679
Query: 756 KKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPG 815
+++G +VAVTGDG ND+PALK+AD+G++MGI G++V+K+++D+++LDD+F S+ T + G
Sbjct: 680 QRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEG 739
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 256 bits (655), Expect = 3e-73
Identities = 184/714 (25%), Positives = 307/714 (42%), Gaps = 104/714 (14%)
Query: 113 GVEGVANALGTNPEYGINGNDEDVSRRSQLFGAN-TYHKPPPKGLLHFVLEAFKDTTILI 171
G E + LG + G+ + +V+ R FG N T + L + AF + I I
Sbjct: 19 GKETLLRKLGVHET-GLT--NVEVTERLAEFGPNQTVEEKKVPNLRLL-IRAFNNPFIYI 74
Query: 172 LLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNI 231
L + +S + I + V ++ R R L + N
Sbjct: 75 LAMLMGVSY--------LTDDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKN- 125
Query: 232 KVEVVR------EARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGE 285
V+R ++ I LV GD++ L GD IPAD + L +++S++TGE
Sbjct: 126 TATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSALTGE 185
Query: 286 SDHVE-VDST-----NNPF-----LFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDS 334
S VE F G+ V G+AQ +V++ G +T +G + + +
Sbjct: 186 SLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERR 245
Query: 335 NERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDV 394
Q DK ++ K L + F++++V + G KG D
Sbjct: 246 G-----QTAFDKGVKSVSK--LLIRFMLVMVPVVLMINGLMKG---------------DW 283
Query: 395 FNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVI 454
A + +A AV + PE LP+ V+ LA M + +V++L A + G+ ++
Sbjct: 284 LEAFLFALAVAVGLT----PEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDIL 339
Query: 455 CTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGS 514
CTDKTGTLT Q+ I E + + + + LN S + G
Sbjct: 340 CTDKTGTLT------------QDKIELEKHIDSSGETSERVLKMAWLN-----SYFQTGW 382
Query: 515 SVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVET--FNSEKKRSGVLIRRKADN 572
K VL AVL E + V+ F+ +++R V++ +A+
Sbjct: 383 -----------KNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVENRAEV 431
Query: 573 TTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQV 632
T I KGA E +L +C+H G + ++ + +S+++++ M +R IA A K +
Sbjct: 432 TRLI-CKGAVEEMLTVCTHK-RFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTL 489
Query: 633 SEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNV 692
E + + EE L + G +G DP + ++A+ A G+ +K++TGDN
Sbjct: 490 KVGEADF-------TKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNE 542
Query: 693 FTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMV 752
I E GI + + + G + +DEE +++ K + AR +P K ++
Sbjct: 543 IVTARICQEVGI-------DANDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRII 595
Query: 753 QCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFT 806
LKK GH V GDG NDAPAL++ADVG+S+ ++AKE+SDI++L+
Sbjct: 596 GLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLM 648
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 239 bits (611), Expect = 8e-68
Identities = 150/575 (26%), Positives = 257/575 (44%), Gaps = 98/575 (17%)
Query: 232 KVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEV 291
K V+R+ + +I +LV GD+V LKIGD +PAD +G +QVD++++TGES V
Sbjct: 93 KARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTK 152
Query: 292 DSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTI 351
+ + + SGS V G A+ +V + GMNT +G+ + + S LQ L K I
Sbjct: 153 KTGDIAY--SGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSK----I 206
Query: 352 GKVGLAVAF-LVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVV 410
G + + LVL+ L+ +F G++ A+V ++V
Sbjct: 207 GLFLIVLIGVLVLIELVVLFFGRGESFREGLQ-------------FALV--------LLV 245
Query: 411 VAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVT 470
IP +P +++T+A + +A+V +L A E + ++C+DKTGTLTLN++ +
Sbjct: 246 GGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSID 305
Query: 471 KFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLS 530
+ + D+ +++ + + AVL
Sbjct: 306 -----EILPFFNGF-----DKDDVL-------LYAALASREEDQ-------DAIDTAVLG 341
Query: 531 WAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCS 590
A ++ D Y +L F+ KR+ + KGA ++IL +C
Sbjct: 342 SAK-DLKEARD----GYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCD 396
Query: 591 HYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLK 650
+ E ++E + +A+ R + A +
Sbjct: 397 NKKEI-----------EEKVEEKVDELASRGYRALGVARTD------------------E 427
Query: 651 EEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQ 710
E LG++ + DP R ++ +E + GVE+KM+TGD++ AK A G L
Sbjct: 428 EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLG---LGTN 484
Query: 711 VEKGEVVEGVEFRN---YTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGD 767
+ +V+ + R+ E ++ D A P K +V+ L+K+GH+V +TGD
Sbjct: 485 IYTADVLLKGDNRDDLPSGLGEMVEDADG---FAEVFPEHKYEIVEILQKRGHLVGMTGD 541
Query: 768 GTNDAPALKEADVGLSMGIQG-TEVAKESSDIVIL 801
G NDAPALK+ADVG++ + G T+ A+ ++DIV+
Sbjct: 542 GVNDAPALKKADVGIA--VAGATDAARSAADIVLT 574
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 238 bits (610), Expect = 1e-66
Identities = 180/629 (28%), Positives = 296/629 (47%), Gaps = 102/629 (16%)
Query: 201 VAVFLVIVVSAFSNF----RQARQFDKLSKISNNIKVEVVR------EARRLQISIFDLV 250
+ L++ +S NF R + D L + +N V+R E L+I I LV
Sbjct: 126 GVIALMVAISTLLNFIQEARSTKAADALKAMVSN-TATVLRVINDKGENGWLEIPIDQLV 184
Query: 251 VGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDS------TNNPF-----L 299
GDI+ L GD IPAD L L V ++S+TGES VE + +NP
Sbjct: 185 PGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLC 244
Query: 300 FSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVA 359
F G+ V G AQ +V++ G NT +G++ +S +E Q + +++ + + L +A
Sbjct: 245 FMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMA 304
Query: 360 FLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPL 419
+VL++ G TKG D + A + A+++ V PE LP+
Sbjct: 305 PVVLLI------NGYTKG---------------DWWEAAL----FALSVAVGLTPEMLPM 339
Query: 420 AVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESI 479
VT TLA ++ + +V++L A + G+ ++CTDKTGTLT Q+ I
Sbjct: 340 IVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLT------------QDKI 387
Query: 480 VQETYCKIASSIRDLFHQGVGLNT---TGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEM 536
V E + I+ + LN+ TG K +L AVLE
Sbjct: 388 VLENHTDISGKTSERVLHSAWLNSHYQTGL-------------------KNLLDTAVLE- 427
Query: 537 GMEMD---KVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYY 593
G++ + + ++ + F+ E++R V++ ++ I KGA E IL +CS
Sbjct: 428 GVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLI-CKGALEEILNVCSQV- 485
Query: 594 ESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEG 653
NG I +D +++ + + LR +A A K + E Y QR E
Sbjct: 486 RHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDY-------QRADESD 538
Query: 654 LTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEK 713
L L G + DP + A++A +++GV +K++TGD+ A + E G+ +
Sbjct: 539 LILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGL-------DA 591
Query: 714 GEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAP 773
GEV+ G + +D+E ++ + AR +P K +V LK++GHVV GDG NDAP
Sbjct: 592 GEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAP 651
Query: 774 ALKEADVGLSMGIQGTEVAKESSDIVILD 802
AL+ AD+G+S+ ++A+E++DI++L+
Sbjct: 652 ALRAADIGISVD-GAVDIAREAADIILLE 679
|
Length = 902 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 208 bits (533), Expect = 2e-62
Identities = 78/249 (31%), Positives = 125/249 (50%), Gaps = 28/249 (11%)
Query: 199 IFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLK 258
I + V + ++ A+ +R + L K+ V+R+ + +I +LVVGDIV LK
Sbjct: 2 ILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLK 61
Query: 259 IGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVG 318
GD++PADG ++G SL+VDES++TGES VE + +F+G+ V G +++V + G
Sbjct: 62 PGDRVPADGRIIEG-SLEVDESALTGESLPVEK--SRGDTVFAGTVVLSGELKVIVTATG 118
Query: 319 MNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGE 378
+T G++ + + +TPLQ LDKL + + LA+A LV ++ R
Sbjct: 119 EDTELGKIARLVEEAKSAKTPLQRLLDKLAKILVPIVLALAILVFLIWFFR--------- 169
Query: 379 NGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAM 438
+ + A+ ++V A PE LPLAV L LA R+ +
Sbjct: 170 ----------------GGDFLEALLRALAVLVAACPEALPLAVPLALAVGAGRLAKKGIL 213
Query: 439 VRKLPACET 447
V+ L A ET
Sbjct: 214 VKNLSALET 222
|
Length = 222 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 206 bits (525), Expect = 2e-55
Identities = 193/709 (27%), Positives = 313/709 (44%), Gaps = 114/709 (16%)
Query: 134 EDVSRRSQLFGANTY-HKPPPKGLLHFVLEAFKDTTILILLVCAALSL--GFGIKEHGAE 190
ED + R Q +G N H+ PP L+ L+AF + I +L+V AA+S + + E
Sbjct: 49 EDAAERLQRYGPNEVAHEKPPHALVQL-LQAFNNPFIYVLMVLAAISFFTDYWLPLRRGE 107
Query: 191 EGWYEGGSIFVAVFLVIVVSAF-SNFRQARQFDKL-SKISNNIKV----EVVREARRLQI 244
E G I + + L+ + F FR + + L + + V E R +I
Sbjct: 108 ETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREI 167
Query: 245 SIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVE-------------- 290
+ +LV GDIV L GD IPAD ++ L + ++ +TGE+ VE
Sbjct: 168 PMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSAD 227
Query: 291 -VDSTNNPFL------FSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQAR 343
+ L F G+ V G A +VV+ G T +G + SI R Q
Sbjct: 228 ALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSLAKSIVG---TRA--QTA 282
Query: 344 LDKLTSTIGKVGLAVAFL---VLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVS 400
D+ +++ L + F+ V VVLL G TKG D A++
Sbjct: 283 FDRGVNSVSW--LLIRFMLVMVPVVLL---INGFTKG---------------DWLEALLF 322
Query: 401 IVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTG 460
+A AV + PE LP+ V+ LA M + +V++L A + G+ V+CTDKTG
Sbjct: 323 ALAVAVGLT----PEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTG 378
Query: 461 TLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFS 520
TLT Q+ I+ E + ++ + Q LN S + S
Sbjct: 379 TLT------------QDRIILEHHLDVSGRKDERVLQLAWLN---SFHQ----------S 413
Query: 521 GSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVET--FNSEKKRSGVLIRRKADNTTHIHW 578
G K ++ AV+ ++ + V+ F+ ++R V++ I
Sbjct: 414 GM---KNLMDQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLI-C 469
Query: 579 KGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETA 638
KGA E +LA+ +H + ++ +D R ++ + A R + A +++ E+
Sbjct: 470 KGAVEEMLAVATHVRD-GDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESR 528
Query: 639 --YNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDN-VFTA 695
Y+ E L + G + DP + A+ A + GV +K++TGDN + TA
Sbjct: 529 AQYSTA-------DERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTA 581
Query: 696 KAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCL 755
K I E G+ E GE + G E D ++V++ V A+ +P K +++ L
Sbjct: 582 K-ICREVGL-------EPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKAL 633
Query: 756 KKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDD 804
+ GH V GDG NDAPAL++ADVG+S+ G ++AKES+DI++L+
Sbjct: 634 QANGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKS 681
|
Length = 903 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 180 bits (458), Expect = 1e-46
Identities = 166/752 (22%), Positives = 283/752 (37%), Gaps = 163/752 (21%)
Query: 131 GNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAE 190
D+++R +G N P P L E + V F + +
Sbjct: 140 LTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLH--PFYVFQV-------FSVILWLLD 190
Query: 191 EGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLV 250
E +Y I I +S + +Q ++ + V V+R + + I+ +LV
Sbjct: 191 EYYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVH--KPQSVIVIRNGKWVTIASDELV 248
Query: 251 VGDIVFLKIGDQ--IPADGLFLDGHSLQVDESSMTGESDHV-------EVDSTNNPF--- 298
GDIV + ++ +P D + L G S V+ES +TGES V D + F
Sbjct: 249 PGDIVSIPRPEEKTMPCDSVLLSG-SCIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYE 307
Query: 299 ------LFSGSKV-------ADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLD 345
LF G+K+ D +VV G +T+ G+++ SI R + D
Sbjct: 308 TSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILY-PKPR-VFKFYKD 365
Query: 346 KLTSTIGKVGLAV-AFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAA 404
+ LA+ F+ ++ L + G G+ I+
Sbjct: 366 SFKFILFLAVLALIGFIYTIIELIKD--GRPLGK----------------------IILR 401
Query: 405 AVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPAC------ETMGSATVICTDK 458
++ I+ + +P LP +++ + S+ R+ +K C G V C DK
Sbjct: 402 SLDIITIVVPPALPAELSIGINNSLARL------KKKGIFCTSPFRINFAGKIDVCCFDK 455
Query: 459 TGTLTLNQMKVTKFW-LGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVA 517
TGTLT + + + L + + +S + H+ + T S++KL
Sbjct: 456 TGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALA--TCHSLTKL-----EG 508
Query: 518 EFSGSPTEKAVLS---WAVLEMG-----------MEMDKVKQKYSILHVETFNSEKKRSG 563
+ G P +K + W + E + D Q+ SI+ F+S +R
Sbjct: 509 KLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMS 568
Query: 564 VLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLR 623
V++ + + KGA E I ++CS V S + ++ R
Sbjct: 569 VIVSTNDERSPDAFVKGAPETIQSLCS----PETV--------PSDYQEVLKSYTREGYR 616
Query: 624 CIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVE 683
+A AYK++ + D+ R + E LT LG + ++P +P ++ ++ + A +
Sbjct: 617 VLALAYKELPKLTLQKAQDLS-RDAV-ESNLTFLGFIVFENPLKPDTKEVIKELKRASIR 674
Query: 684 IKMITGDNVFTAKAIATECGILR-------------------------------LDQQVE 712
MITGDN TA +A ECGI+ QVE
Sbjct: 675 TVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVE 734
Query: 713 -----KGEVVEGVEFRNY--------------TDEERIQKV-DKIRVMARSSPFDKLLMV 752
+ VE + Y E + ++ V AR +P K +V
Sbjct: 735 IPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLV 794
Query: 753 QCLKKKGHVVAVTGDGTNDAPALKEADVGLSM 784
+ L+K + V + GDG ND ALK+ADVG+S+
Sbjct: 795 ELLQKLDYTVGMCGDGANDCGALKQADVGISL 826
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 170 bits (433), Expect = 9e-44
Identities = 101/279 (36%), Positives = 155/279 (55%), Gaps = 22/279 (7%)
Query: 555 FNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGV-IKSMDGNGRSQMENI 613
F+SE KR + T +I+ KGA E I+ CS +GV I ++ R +
Sbjct: 533 FDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIAN 592
Query: 614 IHGMAASSLRCIAFAYKQVSEEETAYNNDVKAR-----QRLKEEGLTLLGIVGIKDPCRP 668
+ +AA LR +AFA K + + NND + + + E L LG++GI DP R
Sbjct: 593 MESLAAEGLRVLAFASKSFDKAD---NNDDQLKNETLNRATAESDLEFLGLIGIYDPPRN 649
Query: 669 GVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLD-----QQVEKGEVVEGVEFR 723
AVE C AG+ + M+TGD TAKAIA E GI+ + ++ V+ G +F
Sbjct: 650 ESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFD 709
Query: 724 NYTDEERIQKVDKIR----VMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEAD 779
+DEE VD ++ V+AR +P K+ M++ L ++ A+TGDG ND+P+LK A+
Sbjct: 710 ALSDEE----VDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMAN 765
Query: 780 VGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQL 818
VG++MGI G++VAK++SDIV+ DD+F S+ + G ++
Sbjct: 766 VGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRM 804
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 132 bits (334), Expect = 5e-32
Identities = 161/665 (24%), Positives = 271/665 (40%), Gaps = 154/665 (23%)
Query: 168 TILILLVCAALSLGFGIKEH------GAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQF 221
++L + A + FG+ + G +F+ V A + R Q
Sbjct: 42 SLLTTCITIAPAS-FGMPGNNLALFNAIITGI-----LFITVLFANFAEAVAEGRGKAQA 95
Query: 222 DKLSKISNNIKVEVVREARRL-QISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDES 280
D L +++R+ + ++ L GDIV ++ GD IP DG ++G + VDES
Sbjct: 96 DSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVA-SVDES 154
Query: 281 SMTGESDHVEVDSTNN-PFLFSGSKVADGYAQMLVVSVGMNTAWG---EMMSSISSDSNE 336
++TGES V +S + + G+++ + LVV N M++ +
Sbjct: 155 AITGESAPVIKESGGDFASVTGGTRILSDW---LVVECTANPGETFLDRMIALVEGAQRR 211
Query: 337 RTPLQARLDKLTSTIGKVGLAVAFLVLVVLLA--RYFTGNTKGENGIKEYNGSNTDIDDV 394
+TP + L TI + L + FL++ L + GN
Sbjct: 212 KTPNEIAL-----TILLIALTLVFLLVTATLWPFAAYGGNAI------------------ 248
Query: 395 FNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVI 454
+V +VA V ++ I GL A+ + M R++ + A E G +
Sbjct: 249 --SVTVLVALLVCLIPTTI-GGLLSAIGIA---GMDRVLGFNVIATSGRAVEACGDVDTL 302
Query: 455 CTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGS 514
DKTGT+TL ++F + QGV T ++L +
Sbjct: 303 LLDKTGTITLGNRLASEF---------------------IPAQGVDEKTLADAAQL---A 338
Query: 515 SVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTT 574
S+A+ +P K+++ A ++G+ D V+ F ++ + SG+ DN
Sbjct: 339 SLAD--DTPEGKSIVILAK-QLGIREDDVQ--SLHATFVEFTAQTRMSGI----NLDNGR 389
Query: 575 HIHWKGAAEIILAMCSHYYESNGVI-KSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVS 633
I KGA + A+ H + G I +D A QV+
Sbjct: 390 MIR-KGAVD---AIKRHVEANGGHIPTDLD-----------------------QAVDQVA 422
Query: 634 EEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVF 693
+ + E + G++ +KD + G+++ + G++ MITGDN
Sbjct: 423 RQ--------GGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRL 474
Query: 694 TAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQ 753
TA AIA E G VD +A ++P DK+ +++
Sbjct: 475 TAAAIAAEAG------------------------------VDDF--IAEATPEDKIALIR 502
Query: 754 CLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813
+ +G +VA+TGDGTNDAPAL +ADVG++M GT+ AKE++++V LD D T + V+
Sbjct: 503 QEQAEGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVH 561
Query: 814 PGDQL 818
G QL
Sbjct: 562 IGKQL 566
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 126 bits (320), Expect = 4e-30
Identities = 64/193 (33%), Positives = 99/193 (51%), Gaps = 42/193 (21%)
Query: 629 YKQVSEEETAYNNDVKARQRLKEEGLT---------LLGIVGIKDPCRPGVQKAVEACQS 679
+ + EE + + L+ EG T L+G++ + D RP ++A+ A ++
Sbjct: 492 ARLLGEEGIDLPLLSERIEALESEGKTVVFVAVDGKLVGVIALADELRPDAKEAIAALKA 551
Query: 680 AGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRV 739
G+++ M+TGDN TA+AIA E GI DE V
Sbjct: 552 LGIKVVMLTGDNRRTAEAIAKELGI----------------------DE----------V 579
Query: 740 MARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIV 799
A P DK +V+ L+ +G VA+ GDG NDAPAL ADVG++MG GT+VA E++D+V
Sbjct: 580 RAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVV 638
Query: 800 ILDDDFTSVATVL 812
++ DD ++V +
Sbjct: 639 LMRDDLSAVPEAI 651
|
Length = 713 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 116 bits (291), Expect = 2e-26
Identities = 103/410 (25%), Positives = 163/410 (39%), Gaps = 96/410 (23%)
Query: 118 ANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPP----KGLLHFVLEAFKDTTILILL 173
A +GT+ G+ +DE R + G N LLH V A ++L+
Sbjct: 16 AEFIGTSIPEGLT-HDEAQHRLKE-VGENRLEADSGIDAKAMLLHQVCNAM----CMVLI 69
Query: 174 VCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKV 233
+ AA+S W EGG I + L I++ ++ + D L +++ +
Sbjct: 70 IAAAISFAM--------HDWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPM-A 120
Query: 234 EVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDS 293
V+R + I DLV GDI LK GD IPAD ++ + DE+ +TGES V D+
Sbjct: 121 HVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVIKDA 180
Query: 294 TNNPF--------------LFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDS----- 334
+ F FS S V G A+ + ++ +N+ G + + + D
Sbjct: 181 -HATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQR 239
Query: 335 ------------------------------NERTPLQARLDKLTSTIGKVGLAVAFLVLV 364
N TPL +L KL + + + A ++
Sbjct: 240 PEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFA---II 296
Query: 365 VLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLT 424
V+ A F DV V+I A + I + IPE L +++T
Sbjct: 297 VMAAHKF---------------------DVDKE-VAIYAICLAISI--IPESLIAVLSIT 332
Query: 425 LAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWL 474
+A M +VRKL A E +G+ IC+DKTGT+T +M + W+
Sbjct: 333 MAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWI 382
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 2e-26
Identities = 57/158 (36%), Positives = 86/158 (54%), Gaps = 33/158 (20%)
Query: 655 TLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKG 714
L G++ + D +P ++ ++A + G+E M+TGDN TAKA+A E GI
Sbjct: 404 ELAGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGI---------E 454
Query: 715 EVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPA 774
V V P DK +++ L++KG VVA+ GDG NDAPA
Sbjct: 455 NVRAEV-----------------------LPDDKAALIKKLQEKGKVVAMVGDGINDAPA 491
Query: 775 LKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVL 812
L +ADVG+++G GT+VA E++D+V+L +D VAT +
Sbjct: 492 LAQADVGIAIG-AGTDVAIEAADVVLLRNDLNDVATAI 528
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 4e-26
Identities = 62/159 (38%), Positives = 92/159 (57%), Gaps = 34/159 (21%)
Query: 655 TLLGIVGIKDPCRPGVQKAVEACQSAGV-EIKMITGDNVFTAKAIATECGILRLDQQVEK 713
LLG++ ++D RP ++A+ A + AG ++ M+TGDN A+A+A E GI
Sbjct: 374 ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGI--------- 424
Query: 714 GEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAP 773
DE V A P DKL +V+ L+++G VVA+ GDG NDAP
Sbjct: 425 -------------DE----------VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAP 461
Query: 774 ALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVL 812
AL ADVG++MG G++VA E++DIV+L+DD +S+ T +
Sbjct: 462 ALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAI 499
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 4e-24
Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 33/163 (20%)
Query: 656 LLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGE 715
+LG++ +KD +PG+++ + G++ MITGDN TA AIA E G
Sbjct: 438 ILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAG------------ 485
Query: 716 VVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPAL 775
VD +A ++P DKL +++ + +G +VA+TGDGTNDAPAL
Sbjct: 486 ------------------VD--DFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPAL 525
Query: 776 KEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQL 818
+ADVG++M GT+ AKE++++V LD + T + V+ G QL
Sbjct: 526 AQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQL 567
|
Length = 681 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 107 bits (270), Expect = 5e-24
Identities = 68/309 (22%), Positives = 120/309 (38%), Gaps = 29/309 (9%)
Query: 172 LLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVI--VVSAFSNFRQARQFDKLSKISN 229
LV A + + Y + + ++ + A + R R L ++
Sbjct: 151 TLVALATIGAYAYSLYATLFPVYFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAP 210
Query: 230 NIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHV 289
V + ++ + ++ VGDIV ++ G++IP DG+ + G S VDES +TGES V
Sbjct: 211 KTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSSS-VDESMLTGESLPV 269
Query: 290 EVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTS 349
E +F+G+ DG + V VG +T ++ + + + P+Q D++ S
Sbjct: 270 EK--KPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVAS 327
Query: 350 TIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIV 409
V L +A L + G E + A+ ++
Sbjct: 328 YFVPVVLVIAALTFAL---WPLFGGGDWETALY---------------------RALAVL 363
Query: 410 VVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKV 469
V+A P L LA + + R +++ A E + + DKTGTLT + +V
Sbjct: 364 VIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEV 423
Query: 470 TKFWLGQES 478
T
Sbjct: 424 TDVVALDGD 432
|
Length = 713 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 2e-23
Identities = 55/159 (34%), Positives = 83/159 (52%), Gaps = 33/159 (20%)
Query: 655 TLLGIVGIKDPCRPGVQKAVEACQSAGVE-IKMITGDNVFTAKAIATECGILRLDQQVEK 713
T LG + + D RP +A+ ++ G+E + M+TGD A+ +A E GI
Sbjct: 352 TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGI--------- 402
Query: 714 GEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAP 773
DE V A P DKL +V+ L++K VA+ GDG NDAP
Sbjct: 403 -------------DE----------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAP 439
Query: 774 ALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVL 812
AL ADVG++MG G++VA E++D+V+L+DD + + +
Sbjct: 440 ALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAI 478
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 2e-22
Identities = 60/167 (35%), Positives = 91/167 (54%), Gaps = 33/167 (19%)
Query: 652 EGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQV 711
E +LG++ +KD +PG+++ + G++ MITGDN TA AIA E G
Sbjct: 432 EDNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAG-------- 483
Query: 712 EKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTND 771
VD +A ++P DKL +++ + +G +VA+TGDGTND
Sbjct: 484 ----------------------VD--DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTND 519
Query: 772 APALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQL 818
APAL +ADVG++M GT+ AKE+ ++V LD + T + V+ G QL
Sbjct: 520 APALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQL 565
|
Length = 679 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 3e-22
Identities = 64/245 (26%), Positives = 108/245 (44%), Gaps = 41/245 (16%)
Query: 237 REARRLQ-------ISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHV 289
AR LQ + + +L VGDIV ++ G++IP DG+ + G S VDES++TGES V
Sbjct: 55 STARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVISGESE-VDESALTGESMPV 113
Query: 290 EV--DSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKL 347
E +F+G+ DG + V +G ++ +++ + + + P+Q D++
Sbjct: 114 EKKEGDE----VFAGTINGDGSLTIRVTKLGEDSTLAQIVELVEEAQSSKAPIQRLADRI 169
Query: 348 TSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVT 407
S LA+A L VV LA A+ ++ A+
Sbjct: 170 ASYYVPAVLAIALLTFVVWLA--------------------------LGALGALY-RALA 202
Query: 408 IVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQM 467
++VVA P L LA + + ++ +++ A E + + DKTGTLT +
Sbjct: 203 VLVVACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKP 262
Query: 468 KVTKF 472
V
Sbjct: 263 TVVDI 267
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 5e-22
Identities = 177/795 (22%), Positives = 277/795 (34%), Gaps = 227/795 (28%)
Query: 197 GSIFVAVFLVIVVS----AFSNFRQARQFDKLSKISNNIKVEVVREARRL-QISIFDLVV 251
G+ V + V++V+ A + R+ R+ K NN EV+ + +I DL V
Sbjct: 51 GTSIVPLAFVLIVTAIKEAIEDIRRRRR----DKEVNNRLTEVLEGHGQFVEIPWKDLRV 106
Query: 252 GDIVFLKIGDQIPADGLF----------------LDG-------HSLQ-----VDESSMT 283
GDIV +K ++IPAD L LDG +L+ +DE +
Sbjct: 107 GDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKMLDEDDIK 166
Query: 284 GESDHVEV-----------------DSTNNPF-----LFSGSKVAD-GYAQMLVVSVGMN 320
S +E P L G + + + +VV G +
Sbjct: 167 NFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHD 226
Query: 321 TAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVL--LARYFTG--NTK 376
T M ++ + S +R+ L+ L+ L + F +L VL ++ G N
Sbjct: 227 TK--LMRNATQAPS-KRSRLEKELNFLIIIL--------FCLLFVLCLISSVGAGIWNDA 275
Query: 377 GENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYS-------- 428
+ ++ + N S + + + IP + L V+L L S
Sbjct: 276 HGKDLWYIRLDVSERNAAANGFFSFLTF-LILFSSLIP--ISLYVSLELVKSVQAYFINS 332
Query: 429 ---MKRMMTD-QAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETY 484
M TD A VR E +G I +DKTGTLT N M+ K SI +Y
Sbjct: 333 DLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKC-----SIAGVSY 387
Query: 485 CKIASSIRDLFHQGVGLNTTGS-----------------VSKLKPG-------------- 513
+ I+D + +G V LK
Sbjct: 388 GDGFTEIKDGIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLAL 447
Query: 514 ----SSVAEFSGSPTEK----------AVLSWAVLEMGMEMDKVKQKYSILHVE------ 553
+ V EF+ E+ A L A ++G + K L +E
Sbjct: 448 ALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETK 507
Query: 554 TFN--------SEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGN 605
+ S++KR V++R D + KGA +I + S
Sbjct: 508 EYEILNVLEFNSDRKRMSVIVRNP-DGRIKLLCKGADTVIF----------KRLSSGGNQ 556
Query: 606 GRSQMENIIHGMAASSLRCIAFAYKQVSEEE-----TAYNNDVKA----RQRLK------ 650
+ + + A+ LR + AY+++SEEE YN A ++L
Sbjct: 557 VNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESI 616
Query: 651 EEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQ 710
E+ L LLG I+D + GV + +E + AG++I ++TGD V TA I C +L + +
Sbjct: 617 EKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNME 676
Query: 711 V--------EKGEVVEGVEFRNYTD-EERIQKVDKIRVMA-------------------- 741
+ VE E + +A
Sbjct: 677 QIVITSDSLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEF 736
Query: 742 -------------RSSPFDKLLMVQCLKKK-GHVVAVTGDGTNDAPALKEADVGLSMGIQ 787
R SP K +V+ +KK G GDG ND ++EADVG+ GI
Sbjct: 737 LQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGV--GIS 794
Query: 788 GTE--VAKESSDIVI 800
G E A +SD I
Sbjct: 795 GKEGMQAVMASDFAI 809
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 95.9 bits (239), Expect = 1e-20
Identities = 55/238 (23%), Positives = 102/238 (42%), Gaps = 33/238 (13%)
Query: 235 VVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEV--D 292
V+R ++++ +L VGD+V +K G+++P DG+ L G S VDES++TGES VE
Sbjct: 59 VLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSGTS-TVDESALTGESVPVEKAPG 117
Query: 293 STNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIG 352
+F+G+ DG ++V + ++ ++++ + + + Q +D+
Sbjct: 118 DE----VFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYT 173
Query: 353 KVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVA 412
V LA+A + +V V A+ ++VVA
Sbjct: 174 PVVLAIALAIWLVPGL--------------------------LKRWPFWVYRALVLLVVA 207
Query: 413 IPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVT 470
P L ++ ++ +++ A E + + DKTGTLT + KV
Sbjct: 208 SPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVV 265
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 90.0 bits (224), Expect = 1e-18
Identities = 64/297 (21%), Positives = 122/297 (41%), Gaps = 35/297 (11%)
Query: 180 LGFGIKEHGAEEGWYEGGSIFVAVFLVI--VVSAFSNFRQARQFDKLSKISNNIKVEVVR 237
L + +++ S + F+++ + + R + KL+K+ + +
Sbjct: 40 LANQVLTGLHVHTFFDA-SAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTD 98
Query: 238 EARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHV--EVDSTN 295
+ ++ + L GDIV + G++IP DG ++G S +VDES +TGES V +V
Sbjct: 99 DGEIEEVPVELLQPGDIVRVLPGEKIPVDGTVIEGES-EVDESLVTGESLPVPKKVGDP- 156
Query: 296 NPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVG 355
+ +G+ G + + G +T +++ + + P+Q DK+ V
Sbjct: 157 ---VIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVV 213
Query: 356 LAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPE 415
+A+A + V+ L D A+ AVT++++A P
Sbjct: 214 IAIALITFVIWLIL---------------------GADFVFALE----VAVTVLIIACPC 248
Query: 416 GLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKF 472
L LA +A + + +++ A E + + DKTGTLT + VT
Sbjct: 249 ALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDV 305
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 87.8 bits (217), Expect = 9e-18
Identities = 58/167 (34%), Positives = 86/167 (51%), Gaps = 33/167 (19%)
Query: 652 EGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQV 711
E +LG++ +KD + G+ + + G+E M TGDN TA IA E G+ R
Sbjct: 428 EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRF---- 483
Query: 712 EKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTND 771
+A P DK+ +++ + KGH+VA+TGDGTND
Sbjct: 484 ----------------------------VAECKPEDKINVIREEQAKGHIVAMTGDGTND 515
Query: 772 APALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQL 818
APAL EA+VGL+M GT AKE+++++ LD + T + V+ G QL
Sbjct: 516 APALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQL 561
|
Length = 673 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 76.1 bits (188), Expect = 7e-17
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 506 SVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVL 565
+ + E G PTE A+L ++G+++++++ +Y + FNSE+KR +
Sbjct: 6 AKFGENEEKNGGEIIGDPTESALLV-FAEKLGIDVEELRARYPRVAEIPFNSERKRMSTV 64
Query: 566 IRRKADNTTHIHWKGAAEIILAMCSHY 592
+ + D+ + KGA E IL CS
Sbjct: 65 HKLEDDDGYRLFVKGAPERILERCSTI 91
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 85.2 bits (211), Expect = 7e-17
Identities = 58/175 (33%), Positives = 80/175 (45%), Gaps = 42/175 (24%)
Query: 647 QRLKEEGLT--LLGIVG-------IKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKA 697
+G T LL + G I+DP R A++ AG + M+TGDN TA A
Sbjct: 623 TAQASQGATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANA 682
Query: 698 IATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKK 757
IA E GI EV+ GV P K ++ L+
Sbjct: 683 IAKEAGI---------DEVIAGV-----------------------LPDGKAEAIKRLQS 710
Query: 758 KGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVL 812
+G VA+ GDG NDAPAL +ADVG++MG G++VA E++ I ++ VA L
Sbjct: 711 QGRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADAL 764
|
Length = 834 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 78.9 bits (195), Expect = 5e-15
Identities = 46/143 (32%), Positives = 71/143 (49%), Gaps = 35/143 (24%)
Query: 655 TLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKG 714
+LG++ ++D R ++A+ ++ G++ M+TGDN A AIA E GI
Sbjct: 558 DVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGI---------- 607
Query: 715 EVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPA 774
+FR A P DK+ V L + +A+ GDG NDAPA
Sbjct: 608 ------DFR-----------------AGLLPEDKVKAVTELNQH-APLAMVGDGINDAPA 643
Query: 775 LKEADVGLSMGIQGTEVAKESSD 797
+K A +G++MG GT+VA E++D
Sbjct: 644 MKAASIGIAMG-SGTDVALETAD 665
|
Length = 741 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 66.8 bits (164), Expect = 7e-14
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 112 GGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILI 171
VE V LGT+ E G+ + + R + +G N + PK L L FKD ++I
Sbjct: 4 LSVEEVLARLGTDLEKGLT--EAEAEERLEKYGPNELPEKKPKSLWKIFLRQFKDPLVII 61
Query: 172 LLVCAALS 179
LL+ A +S
Sbjct: 62 LLIAAIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 60.0 bits (145), Expect = 3e-10
Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 25/125 (20%)
Query: 657 LGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEV 716
LG++ + DP PG ++A++ + AG+++ ++TGDN TA AIA G+
Sbjct: 86 LGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGL------------ 133
Query: 717 VEGVEFRNYTDEERIQKVDKIRVMARSSPFDK--LLMVQCLKKKGHVVAVTGDGTNDAPA 774
+ + D ++ P K L ++ L K V + GDG ND PA
Sbjct: 134 -----------FDALVSADLYGLVGVGKPDPKIFELALEELGVKPEEVLMVGDGVNDIPA 182
Query: 775 LKEAD 779
K A
Sbjct: 183 AKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 61.5 bits (150), Expect = 1e-09
Identities = 63/243 (25%), Positives = 110/243 (45%), Gaps = 41/243 (16%)
Query: 235 VVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDST 294
+R+ R +++I DL GD++ + G ++PADG L DES++TGES + V+
Sbjct: 247 RLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP-FASFDESALTGES--IPVERA 303
Query: 295 NNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKV 354
+ +G+ D + V+S +A ++ I R P++ +D+ +
Sbjct: 304 TGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPA 363
Query: 355 GLAVAFLVLVV---LLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVV 411
+ VA LV++V L A + + I Y G +T++++
Sbjct: 364 IMLVALLVILVPPLLFAAPW------QEWI--YRG-------------------LTLLLI 396
Query: 412 AIPEGL----PLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQM 467
P L P A+T LA + +R A+++ A E +G T + DKTGTLT +
Sbjct: 397 GCPCALVISTPAAITSGLAAAARR----GALIKGGAALEQLGRVTTVAFDKTGTLTEGKP 452
Query: 468 KVT 470
+VT
Sbjct: 453 QVT 455
|
Length = 741 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 61.3 bits (148), Expect = 2e-09
Identities = 67/290 (23%), Positives = 125/290 (43%), Gaps = 51/290 (17%)
Query: 199 IFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVRE------ARRLQ-------IS 245
+F ++++ F+NF +A L++ + +R+ ARR++ I
Sbjct: 65 VFSIFIILLLTLVFANFSEA-----LAEGRGKAQANALRQTQTEMKARRIKQDGSYEMID 119
Query: 246 IFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDST---NNPFLFSG 302
DL G IV + G+QIP DG + G + VDES++TGES V +S +N + G
Sbjct: 120 ASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDN--VIGG 176
Query: 303 SKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLV 362
+ VA + ++ + S ++ +M+ + + ++TP + L L T+ + L V ++
Sbjct: 177 TSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTIIFLVV--IL 234
Query: 363 LVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVT 422
+ LA++ FN ++++ A ++ GL A+
Sbjct: 235 TMYPLAKFLN----------------------FNLSIAMLIALAVCLIPTTIGGLLSAIG 272
Query: 423 LTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKF 472
+ M R+ + + + ET G V+ DKTGT+T F
Sbjct: 273 IA---GMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAF 319
|
Length = 673 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 59.6 bits (145), Expect = 4e-09
Identities = 83/339 (24%), Positives = 141/339 (41%), Gaps = 63/339 (18%)
Query: 153 PKGLLH----FVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIV 208
P+ L+ FV+E +IL + L FG G + +I + ++ ++
Sbjct: 26 PRVLVKNPVMFVVEV---GSILTTFLTIFPDL-FGGT--GGSRLFN--LAITIILWFTVL 77
Query: 209 VSAFSNFRQA-------RQFDKLSKISNNIKVEVVREARRLQ-ISIFDLVVGDIVFLKIG 260
F+NF +A Q D L K ++R ++ + +L GDIV ++ G
Sbjct: 78 ---FANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAG 134
Query: 261 DQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFS----GSKVADGYAQMLVVS 316
+ IP+DG ++G VDES++TGES V +S + FS G++V + ++ + +
Sbjct: 135 EIIPSDGEVIEG-VASVDESAITGESAPVIRESGGD---FSSVTGGTRVLSDWLKIRITA 190
Query: 317 VGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLL---ARYFTG 373
T M++ + ++TP + L TI GL + FL+ V L A Y G
Sbjct: 191 NPGETFLDRMIALVEGAERQKTPNEIAL-----TILLSGLTLIFLLAVATLYPFAIYSGG 245
Query: 374 NTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMM 433
+V +VA V ++ I GL A+ + M R+
Sbjct: 246 GAA--------------------SVTVLVALLVCLIPTTI-GGLLSAIGIA---GMDRVT 281
Query: 434 TDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKF 472
+ A E G + DKTGT+TL + ++F
Sbjct: 282 QFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEF 320
|
Length = 681 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 53.4 bits (129), Expect = 4e-09
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Query: 106 HTLSLLGGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFK 165
H LS +E V L T+ E G++ E+ +RR + +G N P L L F
Sbjct: 5 HALS----LEEVLERLQTDLEKGLS--SEEAARRLERYGPNELPPPKKTSPLLRFLRQFH 58
Query: 166 DTTILILLVCAALSL 180
+ I ILL A LS
Sbjct: 59 NPLIYILLAAAVLSA 73
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 55.3 bits (133), Expect = 1e-07
Identities = 52/215 (24%), Positives = 102/215 (47%), Gaps = 39/215 (18%)
Query: 512 PGSSVAEFSG-SPTEKAVLSWAVLEMG-MEMDKV-----------KQKYSILHVETFNSE 558
P + ++ G SP E+A L +A G M +++ +Q++++L + F+S+
Sbjct: 556 PTVKLMDYQGESPDEQA-LVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSD 614
Query: 559 KKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMA 618
+KR V I D T + KGA + ++ N VI++ + + +H +
Sbjct: 615 RKRMSV-ILGCPDKTVKVFVKGADTSMFSVIDRSLNMN-VIRATEAH--------LHTYS 664
Query: 619 ASSLRCIAFAYKQVSEEE--------TAYNNDVKARQRL-------KEEGLTLLGIVGIK 663
+ LR + +++++ E A + + R L E LT+LG I+
Sbjct: 665 SLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIE 724
Query: 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAI 698
D + GV +A+E+ ++AG+++ ++TGD TA +I
Sbjct: 725 DKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISI 759
|
Length = 1178 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 1e-07
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 727 DEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGI 786
+ RV A + P K +++ LKK+ V + G+G ND AL+EAD+G+ I
Sbjct: 61 QLAEFVGIPVERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGI-CTI 119
Query: 787 QGTEV---AKESSDIVILD 802
Q V ++D+V+ +
Sbjct: 120 QQEGVPERLLLTADVVLKE 138
|
Length = 152 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 53.3 bits (129), Expect = 5e-07
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 21/136 (15%)
Query: 159 FVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQA 218
FV+E +IL ++ A L + +I + ++ ++ F+NF +A
Sbjct: 37 FVVEV---GSILTTILTIAPLLF-----QSGGPAGF-NLAITLWLWFTVL---FANFAEA 84
Query: 219 ----R---QFDKLSKISNNIKVEVVREARRLQ-ISIFDLVVGDIVFLKIGDQIPADGLFL 270
R Q D L + +RE + + +L GDIV ++ G+ IPADG +
Sbjct: 85 LAEGRGKAQADSLRGAKKDTFARKLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVI 144
Query: 271 DGHSLQVDESSMTGES 286
+G VDES++TGES
Sbjct: 145 EG-VASVDESAITGES 159
|
Length = 679 |
| >gnl|CDD|232824 TIGR00099, Cof-subfamily, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 0.001
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 762 VAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVL 812
V GDG ND L+ A G++MG E K +D V ++ VA L
Sbjct: 207 VIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVALAL 256
|
This subfamily of sequences falls within the Class-IIB subfamily (TIGR01484) of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. The use of the name "Cof" as an identifier here is arbitrary and refers to the E. coli Cof protein. This subfamily is notable for the large number of recent paralogs in many species. Listeria, for instance, has 12, Clostridium, Lactococcus and Streptococcus pneumoniae have 8 each, Enterococcus and Salmonella have 7 each, and Bacillus subtilus, Mycoplasma, Staphylococcus and E. coli have 6 each. This high degree of gene duplication is limited to the gamma proteobacteria and low-GC gram positive lineages. The profusion of genes in this subfamily is not coupled with a high degree of divergence, so it is impossible to determine an accurate phylogeny at the equivalog level. Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars. Possibly the diversification of genes in this subfamily represents the diverse sugars and polysaccharides that various bacteria find in their biological niches. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences [Unknown function, Enzymes of unknown specificity]. Length = 256 |
| >gnl|CDD|223635 COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.003
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 757 KKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVL 812
K V+A GD TND L+ A +G++MG E KE +D V +D VA L
Sbjct: 204 KLEEVIAF-GDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEAL 257
|
Length = 264 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 825 | |||
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.92 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.57 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.55 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 99.23 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 99.13 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.13 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.0 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.93 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.91 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.89 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.86 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.82 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.81 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.79 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.78 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.73 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.72 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.69 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.67 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.64 | |
| PLN02887 | 580 | hydrolase family protein | 98.6 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.6 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.54 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.5 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.5 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.48 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.47 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.35 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.27 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.26 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.25 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.19 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.14 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.1 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.09 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.08 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.04 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.0 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.98 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 97.92 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.87 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.81 | |
| PF12515 | 47 | CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory d | 97.76 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.76 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.71 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.71 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.69 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.52 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.48 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.41 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.36 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.35 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.29 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.29 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.21 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.2 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.18 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.07 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 97.0 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.84 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.83 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 96.79 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.72 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.72 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.65 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.64 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.62 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.6 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.5 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.47 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 96.47 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.37 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.29 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.22 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.21 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 95.99 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 95.92 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 95.86 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 95.85 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 95.69 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 95.65 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 95.63 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 95.63 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 95.57 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 95.55 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 95.39 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 95.34 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 95.26 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.2 | |
| PRK06769 | 173 | hypothetical protein; Validated | 95.17 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 95.11 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 94.91 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 94.77 | |
| PLN02940 | 382 | riboflavin kinase | 94.74 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 94.61 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 94.58 | |
| PLN02580 | 384 | trehalose-phosphatase | 94.57 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 94.55 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 94.52 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 93.95 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 93.62 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 93.62 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 93.48 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 93.24 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 93.2 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 93.13 | |
| PLN02811 | 220 | hydrolase | 93.07 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 92.83 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 92.83 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 92.82 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 92.49 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 91.99 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 91.91 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 91.83 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 91.75 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 91.24 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 91.13 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 90.78 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 90.7 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 90.52 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 89.86 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 89.36 | |
| PLN03017 | 366 | trehalose-phosphatase | 89.18 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 88.91 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 87.14 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 86.28 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 84.66 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 83.38 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 83.28 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 81.66 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 80.14 |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-192 Score=1591.90 Aligned_cols=783 Identities=48% Similarity=0.759 Sum_probs=720.0
Q ss_pred ccchHHHHhHHHhhhhhccchhhhhcccccccc----ccccccccc---ccccccCCCCCCCccccccccCCCCCCCCCH
Q 003371 21 STLTKAQKRWRLAYWTIYSFRAMLSVLPKGRLL----SAEILTSHD---YIALDVEPEPSSSHDEANKLVSNSIDPDMDG 93 (825)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (825)
+++.++++|||.|..+++++|||++..+.++.+ ...+.++.. .++..+.++.... .-.-+|++
T Consensus 13 n~~~~~~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~~~r~~~r~~~~~~~a~~~~~~~~~~~----------e~~~~i~~ 82 (1034)
T KOG0204|consen 13 NSSIEALQRWRLAYIVLEASRRFRFGASLKKLRELMEPRRKIRSAVLVSKAAALFIDAGSRT----------EYTLGIGA 82 (1034)
T ss_pred cchhhhhhhhhhhhhhcccchhhccccCHHHHHHHHHHHhhhhhhhcccchhhhhhcccccc----------ccccccCH
Confidence 577899999999999999999999987532111 111333332 3345555443321 01127899
Q ss_pred HHHHHHhcCCChhHHHhhCCHHHHHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHH
Q 003371 94 IRLAEMVKNKDSHTLSLLGGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILL 173 (825)
Q Consensus 94 ~~l~~~~~~~~~~~l~~~ggv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~ 173 (825)
|+|.++++++|.+.|+++||++|||++|+||+..||+++++++.+|++.||+|.||++++|+||+|+||+|+|.+++||+
T Consensus 83 e~l~~i~~~~~~~~L~~~gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~ 162 (1034)
T KOG0204|consen 83 EELVKIVKEHDLKALNAYGGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILM 162 (1034)
T ss_pred HHHHHHhhccchhhhhhccCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccccCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEEEEEEecCcccCe
Q 003371 174 VCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGD 253 (825)
Q Consensus 174 v~a~lsl~~g~~~~g~~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGD 253 (825)
+||++|+++|+.++|.++|||||++|+++++++++|+|++||+|++||++|++++.+.+++|+|||++++|+++||||||
T Consensus 163 vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGD 242 (1034)
T KOG0204|consen 163 VAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGD 242 (1034)
T ss_pred HHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCeeeceEEEEecCcceecCCCCCCCCCeeeecCCCCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCC
Q 003371 254 IVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSD 333 (825)
Q Consensus 254 IV~l~~Gd~VPaDgili~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~ 333 (825)
|++|+.||+|||||++++|++|.||||+|||||++++|+...+|||+|||++++|+|+|+||+||+||+||++|.++..+
T Consensus 243 Iv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~ 322 (1034)
T KOG0204|consen 243 IVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAG 322 (1034)
T ss_pred EEEeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcC
Confidence 99999999999999999999999999999999999999988999999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHh
Q 003371 334 SNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAI 413 (825)
Q Consensus 334 ~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvav 413 (825)
.+++||||.+|+++|..|+++|+++|+++|++++++|+.+++..+.+. ......+.++.++.+|+++++++|||+
T Consensus 323 ~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~-----~~~~~~~~~~~~v~~f~i~VTilVVAV 397 (1034)
T KOG0204|consen 323 GEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGT-----GTTWSDEYIQEFVKFFIIAVTILVVAV 397 (1034)
T ss_pred CCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCC-----CccccHHHHHHHHHHhhheeEEEEEEC
Confidence 989999999999999999999999999999999999999988765432 122344567799999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEecccccccccc--ccCChHH
Q 003371 414 PEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETY--CKIASSI 491 (825)
Q Consensus 414 P~~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~--~~~~~~~ 491 (825)
|||||||||++|||+|+|||+|++|||+++||||||++|+||+|||||||+|+|+|++.|++++.+..+.. ..+++++
T Consensus 398 PEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~ 477 (1034)
T KOG0204|consen 398 PEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSL 477 (1034)
T ss_pred CCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988774333 4699999
Q ss_pred HHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecCC
Q 003371 492 RDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKAD 571 (825)
Q Consensus 492 ~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~ 571 (825)
.+++.+++++|+++++..+......++++|+|||+|||.|+. ++|++++..|.+.++++++||||.||+|||+++.+++
T Consensus 478 ~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~-~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~ 556 (1034)
T KOG0204|consen 478 LDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGL-KLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDG 556 (1034)
T ss_pred HHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHH-HhCcchHhhcchhheeEEeccCcccceeeEEEEcCCC
Confidence 999999999999999987644445899999999999999999 7999999999999999999999999999999998888
Q ss_pred CeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhc
Q 003371 572 NTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKE 651 (825)
Q Consensus 572 ~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e 651 (825)
+.| +|||||+|+||.+|++|++++|+..+++++.+..+++.|+.||++||||+|+|||++....+..+ ....+..++
T Consensus 557 ~~y-~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~--~~~~~~~~~ 633 (1034)
T KOG0204|consen 557 GHY-VHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEP--SWDNEELPE 633 (1034)
T ss_pred CeE-EEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCC--CccccccCC
Confidence 765 99999999999999999999999999999999999999999999999999999999754311111 012245678
Q ss_pred cCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHH
Q 003371 652 EGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERI 731 (825)
Q Consensus 652 ~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~ 731 (825)
.+|+++|++||+||+||||++||+.||+|||+|+|+||||+.||+|||.+|||++++. +..++||++||+++++|++
T Consensus 634 ~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~---d~~~lEG~eFr~~s~ee~~ 710 (1034)
T KOG0204|consen 634 GGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGG---DFLALEGKEFRELSQEERD 710 (1034)
T ss_pred CCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCC---ccceecchhhhhcCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999864 3689999999999999999
Q ss_pred hhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHH
Q 003371 732 QKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATV 811 (825)
Q Consensus 732 ~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~ 811 (825)
+++|+++|+||+||.||+.+|+.|+++||+||+||||+||+||||+||||+|||++|||||||+|||||+||||++||++
T Consensus 711 ~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~ 790 (1034)
T KOG0204|consen 711 KIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKA 790 (1034)
T ss_pred hhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHhhccccCC
Q 003371 812 LSPGDQLHSGCFCW 825 (825)
Q Consensus 812 i~~gR~i~~ni~~~ 825 (825)
++|||++|+||.+|
T Consensus 791 v~WGR~VY~nIqKF 804 (1034)
T KOG0204|consen 791 VKWGRNVYDNIQKF 804 (1034)
T ss_pred HHhhhHHHHHHHHh
Confidence 99999999999654
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-135 Score=1137.56 Aligned_cols=682 Identities=34% Similarity=0.527 Sum_probs=591.5
Q ss_pred CHHHHHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCCCc
Q 003371 113 GVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEG 192 (825)
Q Consensus 113 gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~ 192 (825)
.+++.+..|+|++++||+.+| +.+|++.||.|+++....+++|+++++||.|+.+.+|+++|++||+++ .
T Consensus 8 ~v~e~~~~f~t~~~~GLt~~e--v~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~--------~ 77 (972)
T KOG0202|consen 8 SVSEVLAEFGTDLEEGLTSDE--VTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA--------D 77 (972)
T ss_pred cHHHHHHHhCcCcccCCCHHH--HHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH--------h
Confidence 588999999999999999976 999999999999999999999999999999999999999999999997 3
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEec
Q 003371 193 WYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDG 272 (825)
Q Consensus 193 ~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g 272 (825)
|.|+++|.+++++++.|..+++|+.++..+.|+++ .+..++|+|+|+.+.+.+.||||||||.|+.||+||||.++++.
T Consensus 78 ~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l-~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~ 156 (972)
T KOG0202|consen 78 FDEPFVITLIIVINVTVGFVQEYNAEKALEALKEL-VPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIEA 156 (972)
T ss_pred cccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhc-CCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEee
Confidence 67899999999999999999999999999999866 57789999999999999999999999999999999999999999
Q ss_pred CcceecCCCCCCCCCeeeecCC------------CCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCChh
Q 003371 273 HSLQVDESSMTGESDHVEVDST------------NNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPL 340 (825)
Q Consensus 273 ~~l~VDES~LTGEs~pv~k~~~------------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tpl 340 (825)
.++.||||+|||||.||.|..+ +.+++|+||.|..|.++++|++||.||++|++.+.+.+.++.+|||
T Consensus 157 ~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTPL 236 (972)
T KOG0202|consen 157 KSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTPL 236 (972)
T ss_pred eeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCcH
Confidence 9999999999999999999632 4578999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHH
Q 003371 341 QARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLA 420 (825)
Q Consensus 341 q~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lpla 420 (825)
|++++.+..++.++..++.+.+.++- +.||.. .....+.|....++|..++++.|.|+|||||..
T Consensus 237 qk~ld~~G~qLs~~is~i~v~v~~~n-ig~f~~--------------p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaV 301 (972)
T KOG0202|consen 237 QKKLDEFGKQLSKVISFICVGVWLLN-IGHFLD--------------PVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAV 301 (972)
T ss_pred HHHHHHHHHHHHHHheehhhhHHHhh-hhhhcc--------------ccccccchhchhhhhhHHHHHHHHhccCCCcch
Confidence 99999999999865544433333221 223320 001112234778899999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEecccccccc-------------c----
Q 003371 421 VTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQE-------------T---- 483 (825)
Q Consensus 421 vtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~-------------~---- 483 (825)
+|++||.+.+||+|++++||++.++||||.+++||+|||||||+|+|+|.++|+.+...... .
T Consensus 302 vT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~ 381 (972)
T KOG0202|consen 302 VTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFK 381 (972)
T ss_pred hhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEe
Confidence 99999999999999999999999999999999999999999999999999999865422111 0
Q ss_pred -------cccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCchHH--------------
Q 003371 484 -------YCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDK-------------- 542 (825)
Q Consensus 484 -------~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~-------------- 542 (825)
.....+.+.+++..+ ++|+.+.+... +. +.++..|.|||.||..++. ++|+.-..
T Consensus 382 ~~~~~~~~~~~~~~l~~l~~i~-~lCNda~v~~~-~~-~~~~~~G~pTE~AL~vlae-Km~l~~~~~~~~s~~~~~~c~~ 457 (972)
T KOG0202|consen 382 DGLYEKDKAGDNDLLQELAEIC-ALCNDATVEYN-DA-DCYEKVGEPTEGALIVLAE-KMGLPGTRSTNLSNEEASACNR 457 (972)
T ss_pred cCccccccccccHHHHHHHHHH-HhhhhhhhhcC-ch-hhHHhcCCchHHHHHHHHH-HcCCCcchhhcccccccccchh
Confidence 011233444555444 44545555432 22 5667799999999999998 77765322
Q ss_pred -HhhcceEEEEecCCCCCceeEEEEEecCC-CeEEEEEcCcHHHHHHhcccccccCC-eeecCChhhHHHHHHHHHHHhh
Q 003371 543 -VKQKYSILHVETFNSEKKRSGVLIRRKAD-NTTHIHWKGAAEIILAMCSHYYESNG-VIKSMDGNGRSQMENIIHGMAA 619 (825)
Q Consensus 543 -~~~~~~i~~~~~F~s~~krmsvvv~~~~~-~~~~~~~KGa~e~il~~c~~~~~~~g-~~~~l~~~~~~~~~~~i~~~a~ 619 (825)
..+.++....+||+|+||+|+|.+..+.+ ..+.+|+|||+|.|+++|++++..+| ...||++..|+.+.+...+|++
T Consensus 458 ~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~ 537 (972)
T KOG0202|consen 458 VYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGS 537 (972)
T ss_pred HHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhh
Confidence 33445677999999999999999987655 35789999999999999998888777 5599999999999999999999
Q ss_pred ccCeEEEEEEeecCc-hhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHH
Q 003371 620 SSLRCIAFAYKQVSE-EETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAI 698 (825)
Q Consensus 620 ~glR~l~lA~k~l~~-~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aI 698 (825)
+|||||+||+++.+. ..+....+....+...|.+|+|+|+||+.||+||+|++||+.|++|||+|+|+||||..||.+|
T Consensus 538 ~gLRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI 617 (972)
T KOG0202|consen 538 EGLRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAI 617 (972)
T ss_pred ccceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHH
Confidence 999999999998763 1111111111234457899999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhC
Q 003371 699 ATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEA 778 (825)
Q Consensus 699 A~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~A 778 (825)
|+++||...+.+ ....+++|.+|+.++++++.+...+..||||++|++|.+||+.||++|++|||||||+|||||||.|
T Consensus 618 ~r~iGi~~~~ed-~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~A 696 (972)
T KOG0202|consen 618 AREIGIFSEDED-VSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKA 696 (972)
T ss_pred HHHhCCCcCCcc-ccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhc
Confidence 999999886554 4668999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhccccCC
Q 003371 779 DVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCFCW 825 (825)
Q Consensus 779 dVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~~~ 825 (825)
|||||||++||+|||+|||+||.||||++|+.||++||.+|+||+.|
T Consensus 697 dIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~F 743 (972)
T KOG0202|consen 697 DIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNF 743 (972)
T ss_pred ccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999754
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-127 Score=1177.90 Aligned_cols=716 Identities=42% Similarity=0.678 Sum_probs=628.9
Q ss_pred ccCCCCCCCCCHHHHHHHhcC-CChhHHHhhCCHHHHHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHH
Q 003371 82 LVSNSIDPDMDGIRLAEMVKN-KDSHTLSLLGGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFV 160 (825)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~~~~-~~~~~l~~~ggv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~ 160 (825)
.....++|++...++.++.+. ++.+.|+++||++++++.|+++.++||+++++++++|+++||+|+++.+++++||+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~ 90 (941)
T TIGR01517 11 RDNFTDGFDVGVSILTDLTDIFKRAPIYEKLGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIV 90 (941)
T ss_pred hhccCCCCCCCHHHHHHhcCchhhHHHHHHhCCHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHH
Confidence 344557899999999999976 5788899999999999999999999999555679999999999999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHHHhhhccc-----cCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEE
Q 003371 161 LEAFKDTTILILLVCAALSLGFGIK-----EHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEV 235 (825)
Q Consensus 161 ~~~~~~~~~~il~v~a~lsl~~g~~-----~~g~~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V 235 (825)
+++|+++++++|++++++|+++++. +++..++|++++.|+++++++++++++++|++++++++|++..++.+++|
T Consensus 91 ~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~V 170 (941)
T TIGR01517 91 WAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAV 170 (941)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEE
Confidence 9999999999999999999998742 34455689999999999999999999999999999999987666789999
Q ss_pred EeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCcceecCCCCCCCCCeeeecCCCCceeeeCceeeeceEEEEEE
Q 003371 236 VREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVV 315 (825)
Q Consensus 236 ~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~ 315 (825)
+|||++++|++.||||||||.|++||+|||||++++|+.+.||||+|||||.|+.|.+.+.+++|+||.|.+|.++++|+
T Consensus 171 iRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~ 250 (941)
T TIGR01517 171 IRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVT 250 (941)
T ss_pred EECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEE
Confidence 99999999999999999999999999999999999998889999999999999999877778999999999999999999
Q ss_pred EEcccchHHHHHhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhH
Q 003371 316 SVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVF 395 (825)
Q Consensus 316 ~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (825)
+||.+|++||+++++.+.. +++|+|+++++++.++.++++++++++|+++++.++....... .. + .....
T Consensus 251 ~tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~--~~-~------~~~~~ 320 (941)
T TIGR01517 251 AVGVNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGD--GR-D------TEEDA 320 (941)
T ss_pred EeCCCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc--cc-c------cchhh
Confidence 9999999999999987654 5789999999999999999999888888887655443211100 00 0 00011
Q ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEec
Q 003371 396 NAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLG 475 (825)
Q Consensus 396 ~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~ 475 (825)
..+...|..++++++++||||||+++|+++++++++|+++|++||+++++|+||++|+||||||||||+|+|+|++++..
T Consensus 321 ~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~ 400 (941)
T TIGR01517 321 QTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIG 400 (941)
T ss_pred HHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEe
Confidence 25677889999999999999999999999999999999999999999999999999999999999999999999999976
Q ss_pred cccccccc-cccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEec
Q 003371 476 QESIVQET-YCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVET 554 (825)
Q Consensus 476 ~~~~~~~~-~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~ 554 (825)
+..++.+. ....++...+++..++.+|+.+.... +..+..+..|||+|.|+++|+. +.|.+....+..+++++.+|
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~--~~~~~~~~~g~p~e~All~~~~-~~~~~~~~~~~~~~~~~~~p 477 (941)
T TIGR01517 401 EQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVV--DRGGKRAFIGSKTECALLGFLL-LLGRDYQEVRAEEKVVKIYP 477 (941)
T ss_pred cceEecCcccccCCHHHHHHHHHHHHhCCCCcccc--CCCCccccCCCccHHHHHHHHH-HcCCCHHHHHhhchhccccc
Confidence 54332211 11123445667777787887654321 1123346789999999999997 78888877777888999999
Q ss_pred CCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCc
Q 003371 555 FNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSE 634 (825)
Q Consensus 555 F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~ 634 (825)
|+|++|||+++++.+++ ++++|+|||||.|+++|+++.+.+|...++++ .++.+++.+++|+++|+|++++|||+++.
T Consensus 478 F~s~~k~msvv~~~~~~-~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~ 555 (941)
T TIGR01517 478 FNSERKFMSVVVKHSGG-KVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIEPLASDALRTICLAYRDFAP 555 (941)
T ss_pred cCCCCCeEEEEEEeCCC-cEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHHHHHhcCCEEEEEEEEecCc
Confidence 99999999999986544 48999999999999999988777888888887 78889999999999999999999999864
Q ss_pred hhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccc
Q 003371 635 EETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKG 714 (825)
Q Consensus 635 ~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~ 714 (825)
++. + .....|++|+|+|+++|+||+||+++++|+.|+++||+|+|+||||+.||.+||++|||.++ ..
T Consensus 556 ~~~--~-----~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~-----~~ 623 (941)
T TIGR01517 556 EEF--P-----RKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTF-----GG 623 (941)
T ss_pred ccc--c-----cccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCC-----Cc
Confidence 221 1 11234789999999999999999999999999999999999999999999999999999875 34
Q ss_pred eeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHH
Q 003371 715 EVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKE 794 (825)
Q Consensus 715 ~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~ 794 (825)
.+++|++|++++++++.+.+++..||||++|+||+++|+.||++|++|||||||+||+||||+||||||||++|+|+||+
T Consensus 624 ~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~ 703 (941)
T TIGR01517 624 LAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKE 703 (941)
T ss_pred eEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCeeeccCCchHHHHHHHHhHHhhccccC
Q 003371 795 SSDIVILDDDFTSVATVLSPGDQLHSGCFC 824 (825)
Q Consensus 795 aaDivlldd~f~sIv~~i~~gR~i~~ni~~ 824 (825)
+||+||+||||++|+++++|||++|+||..
T Consensus 704 aADivL~dd~f~~I~~~i~~gR~~~~ni~k 733 (941)
T TIGR01517 704 ASDIILLDDNFASIVRAVKWGRNVYDNIRK 733 (941)
T ss_pred hCCEEEecCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999964
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-123 Score=1137.63 Aligned_cols=670 Identities=29% Similarity=0.467 Sum_probs=573.0
Q ss_pred CHHHHHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCCCc
Q 003371 113 GVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEG 192 (825)
Q Consensus 113 gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~ 192 (825)
.++.+.+.|+|+..+||++++ +.+|+++||+|++++++++++|.+++++|.++++++|++++++|++++ .
T Consensus 11 ~~~~v~~~l~t~~~~GLs~~e--a~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~--------~ 80 (1053)
T TIGR01523 11 IADEAAEFIGTSIPEGLTHDE--AQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH--------D 80 (1053)
T ss_pred CHHHHHHHhCcCcccCCCHHH--HHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh--------h
Confidence 578899999999989998866 999999999999999999999999999999999999999999999886 5
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEec
Q 003371 193 WYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDG 272 (825)
Q Consensus 193 ~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g 272 (825)
|+|++.|++++++..+++.+++|+.++.+++|.+.. ..+++|+|||++++|++.||||||||.|++||+|||||+|+++
T Consensus 81 ~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~-~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~ 159 (1053)
T TIGR01523 81 WIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLA-SPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIET 159 (1053)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccC-CCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEe
Confidence 999999999999999999999999999999998764 5689999999999999999999999999999999999999999
Q ss_pred CcceecCCCCCCCCCeeeecCC-------------CCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCC----
Q 003371 273 HSLQVDESSMTGESDHVEVDST-------------NNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSN---- 335 (825)
Q Consensus 273 ~~l~VDES~LTGEs~pv~k~~~-------------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~---- 335 (825)
++|.||||+|||||.||.|.+. ..+++|+||.|.+|.++++|++||++|++|++.+++.+...
T Consensus 160 ~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~~~ 239 (1053)
T TIGR01523 160 KNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQR 239 (1053)
T ss_pred CceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhcccc
Confidence 9999999999999999999742 24689999999999999999999999999999998854321
Q ss_pred -------------------------------CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccc
Q 003371 336 -------------------------------ERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEY 384 (825)
Q Consensus 336 -------------------------------~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~ 384 (825)
.+||||+++++++.+++.+++++++++|++.. + .
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~---~-~----------- 304 (1053)
T TIGR01523 240 PEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHK---F-D----------- 304 (1053)
T ss_pred ccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh---h-h-----------
Confidence 24999999999999988887777766665321 1 0
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCcccc
Q 003371 385 NGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTL 464 (825)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~ 464 (825)
.....+..+++++|+++|||||+.+|++++++++||++++++||+++++|+||++|+||+|||||||+
T Consensus 305 ------------~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~ 372 (1053)
T TIGR01523 305 ------------VDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQ 372 (1053)
T ss_pred ------------hhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCcccc
Confidence 11245667899999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEEeccc-cc---------ccc--c---------------------c--------c--c-----CChHHHHHHH
Q 003371 465 NQMKVTKFWLGQE-SI---------VQE--T---------------------Y--------C--K-----IASSIRDLFH 496 (825)
Q Consensus 465 n~m~v~~~~~~~~-~~---------~~~--~---------------------~--------~--~-----~~~~~~~~l~ 496 (825)
|+|+|+++|..+. .+ .+. . . . . .++...+++.
T Consensus 373 N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 452 (1053)
T TIGR01523 373 GKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLE 452 (1053)
T ss_pred ceEEEEEEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHH
Confidence 9999999997541 11 000 0 0 0 0 0012233444
Q ss_pred HHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCchH------HH-------------------hhcceEEE
Q 003371 497 QGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMD------KV-------------------KQKYSILH 551 (825)
Q Consensus 497 ~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~------~~-------------------~~~~~i~~ 551 (825)
..++|+.+..... +..+.....|||+|.||+.|+. +.|.+.. .. +..|++++
T Consensus 453 -~~~lcn~a~~~~~-~~~~~~~~~GdptE~ALl~~a~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (1053)
T TIGR01523 453 -TAALANIATVFKD-DATDCWKAHGDPTEIAIHVFAK-KFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIA 529 (1053)
T ss_pred -HHHhccCCeeecc-CCCCceeeCcCccHHHHHHHHH-HcCCCcccccchhhhhhhccccccccccccccccccccceEE
Confidence 4445554444321 1223345679999999999997 7776421 11 23578999
Q ss_pred EecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcccccccCC-eeecCChhhHHHHHHHHHHHhhccCeEEEEEEe
Q 003371 552 VETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNG-VIKSMDGNGRSQMENIIHGMAASSLRCIAFAYK 630 (825)
Q Consensus 552 ~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g-~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k 630 (825)
.+||+|+||||+++++.++++.+++|+|||||.|+++|+++...+| ...+++++.++.+.+.+++|+++|+|||+||||
T Consensus 530 ~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r 609 (1053)
T TIGR01523 530 EFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASK 609 (1053)
T ss_pred EeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEE
Confidence 9999999999999998765555889999999999999998766555 567999999999999999999999999999999
Q ss_pred ecCchhhcccchhH---HhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCccc
Q 003371 631 QVSEEETAYNNDVK---ARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRL 707 (825)
Q Consensus 631 ~l~~~e~~~~~~~~---~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~ 707 (825)
+++.++.... ... ..++..|++|+|+|+++|+||+||+++++|+.|++|||+|+|+|||++.||.+||++|||+..
T Consensus 610 ~l~~~~~~~~-~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~ 688 (1053)
T TIGR01523 610 SFDKADNNDD-QLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPP 688 (1053)
T ss_pred ECCchhccch-hhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCc
Confidence 9865321100 000 112346899999999999999999999999999999999999999999999999999999864
Q ss_pred ccc-----cccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 003371 708 DQQ-----VEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGL 782 (825)
Q Consensus 708 ~~~-----~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGi 782 (825)
+.. .....+++|++++.++++++.+.+.+..||||++|+||+++|+.||++|++|+|||||+||+|||++|||||
T Consensus 689 ~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGI 768 (1053)
T TIGR01523 689 NFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGI 768 (1053)
T ss_pred cccccccccccceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccE
Confidence 211 113579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhccccC
Q 003371 783 SMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCFC 824 (825)
Q Consensus 783 amg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~~ 824 (825)
|||++|+++||++||+||+||||++|+++++|||++|+||..
T Consensus 769 Amg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k 810 (1053)
T TIGR01523 769 AMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMK 810 (1053)
T ss_pred ecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999964
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-122 Score=1118.51 Aligned_cols=657 Identities=36% Similarity=0.576 Sum_probs=580.1
Q ss_pred HHHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCCCcchh
Q 003371 116 GVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYE 195 (825)
Q Consensus 116 ~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~~~d 195 (825)
.+...+.++...||+.++ +.+|++.||.|+++..+..++|..++.+|.+++.++|++++++|++++....+. .+
T Consensus 32 ~~~~~~~~~~~~GLs~~e--~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~----~~ 105 (917)
T COG0474 32 ELLLELFTSPTTGLSEEE--VKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAG----VD 105 (917)
T ss_pred hHHHhhcCCcccCCCHHH--HHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC----cc
Confidence 556677888899999954 999999999999999999999999999999999999999999999887311100 45
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCcc
Q 003371 196 GGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSL 275 (825)
Q Consensus 196 ~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l 275 (825)
...|+..+++..++..+++|+.++..++|.+.. ..+++|+|||++++|+++||||||||.|++||+||||+++++++++
T Consensus 106 ~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~-~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l 184 (917)
T COG0474 106 AIVILLVVVINALLGFVQEYRAEKALEALKKMS-SPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDL 184 (917)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecCc
Confidence 567788888888889999999999999998764 7899999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCCCCeeeecC------------CCCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCChhHHH
Q 003371 276 QVDESSMTGESDHVEVDS------------TNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQAR 343 (825)
Q Consensus 276 ~VDES~LTGEs~pv~k~~------------~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~ 343 (825)
.||||+|||||.|+.|.+ ...+++|+||.|..|.+.++|++||++|+.|++...+.......||+|++
T Consensus 185 ~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~ 264 (917)
T COG0474 185 EVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRK 264 (917)
T ss_pred eEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHHHH
Confidence 999999999999999973 34689999999999999999999999999999999998776789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHH
Q 003371 344 LDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTL 423 (825)
Q Consensus 344 l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl 423 (825)
++++...+..+++++++++|++. ++.+.. .+...|+.++++++.++|+|||+.+++
T Consensus 265 l~~~~~~l~~~~l~~~~~~~~~~---~~~~~~---------------------~~~~~~~~~v~l~va~IPegLp~~vti 320 (917)
T COG0474 265 LNKLGKFLLVLALVLGALVFVVG---LFRGGN---------------------GLLESFLTALALAVAAVPEGLPAVVTI 320 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HHhcCc---------------------cHHHHHHHHHHHHHhccccchHHHHHH
Confidence 99999999998888888777765 222210 256789999999999999999999999
Q ss_pred HHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEecc--ccccccccccCChHHHHHHHHHHhh
Q 003371 424 TLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQ--ESIVQETYCKIASSIRDLFHQGVGL 501 (825)
Q Consensus 424 ~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~i~~ 501 (825)
++++++++|.+++++||+++++|+||++++||||||||||+|+|+|.++|..+ ...+ +.....++...+++ ..+++
T Consensus 321 ~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~-~~~~~~~~~~~~~l-~~~~l 398 (917)
T COG0474 321 ALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDID-DKDLKDSPALLRFL-LAAAL 398 (917)
T ss_pred HHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCccccc-ccccccchHHHHHH-HHHHh
Confidence 99999999999999999999999999999999999999999999999999984 2222 11111222233333 34456
Q ss_pred cCCccccccCCCCCcceecCChhHHHHHHHHHHHcCC--chHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEc
Q 003371 502 NTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGM--EMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWK 579 (825)
Q Consensus 502 n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~--~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~K 579 (825)
|++..... + + ++..|||+|.||++++. +.|. +....+..+++++.+||+|+||||+|+++..+++ +.+++|
T Consensus 399 c~~~~~~~---~-~-~~~~gdptE~Al~~~a~-~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~-~~~~~K 471 (917)
T COG0474 399 CNSVTPEK---N-G-WYQAGDPTEGALVEFAE-KLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGK-YILFVK 471 (917)
T ss_pred cCcccccc---c-C-ceecCCccHHHHHHHHH-hcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCc-EEEEEc
Confidence 66554432 2 2 67899999999999998 8888 8888888899999999999999999999865555 899999
Q ss_pred CcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeee
Q 003371 580 GAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGI 659 (825)
Q Consensus 580 Ga~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~ 659 (825)
||||.|+++|+++ |...+++++.++.++...++|+++|||++++|||.++..+.... . ...|++|+|+|+
T Consensus 472 GApe~il~~~~~~----~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~-----~-~~~E~dl~~lGl 541 (917)
T COG0474 472 GAPEVILERCKSI----GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDE-----V-DEIESDLVFLGL 541 (917)
T ss_pred CChHHHHHHhccc----CcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccch-----h-hhhhccceeehh
Confidence 9999999999987 77889999999999999999999999999999997755222111 1 567899999999
Q ss_pred ecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeE
Q 003371 660 VGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRV 739 (825)
Q Consensus 660 v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V 739 (825)
++|+||+|++|+++|+.|++|||+|||+||||+.||++||++|||...... ..+++|.+++.++++++.+.+++..|
T Consensus 542 ~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~---~~vi~G~el~~l~~~el~~~~~~~~V 618 (917)
T COG0474 542 TGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAES---ALVIDGAELDALSDEELAELVEELSV 618 (917)
T ss_pred hhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCc---eeEeehHHhhhcCHHHHHHHhhhCcE
Confidence 999999999999999999999999999999999999999999999875211 56999999999999999999999999
Q ss_pred EEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhh
Q 003371 740 MARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLH 819 (825)
Q Consensus 740 ~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~ 819 (825)
|||+||+||.++|+.||++|++|||||||+|||||||+||||||||..|||+||++||||++||||++|+.+++|||++|
T Consensus 619 fARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~ 698 (917)
T COG0474 619 FARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVY 698 (917)
T ss_pred EEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCC
Q 003371 820 SGCFCW 825 (825)
Q Consensus 820 ~ni~~~ 825 (825)
+||..|
T Consensus 699 ~ni~k~ 704 (917)
T COG0474 699 VNIKKF 704 (917)
T ss_pred HHHHHH
Confidence 999653
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-118 Score=1095.01 Aligned_cols=680 Identities=27% Similarity=0.417 Sum_probs=579.3
Q ss_pred CHHHHHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhh-cccc----C
Q 003371 113 GVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGF-GIKE----H 187 (825)
Q Consensus 113 gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~-g~~~----~ 187 (825)
.++++.+.|+++..+||++++ +.+|+++||+|++++++++++|++++++|.+++.++|++++++++++ ++.. +
T Consensus 21 ~~~~~~~~l~t~~~~GLs~~e--~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~ 98 (997)
T TIGR01106 21 SLDELERKYGTDLSKGLSAAR--AAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEE 98 (997)
T ss_pred CHHHHHHHhCcCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCC
Confidence 688899999999999999866 99999999999999988999999999999999999999999998765 3321 1
Q ss_pred CCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeeceE
Q 003371 188 GAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADG 267 (825)
Q Consensus 188 g~~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDg 267 (825)
.....|++++.|++.+++..++..+.+++.++..++|.+. .+.+++|+|||++++|++.||||||+|.|++||+|||||
T Consensus 99 ~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~-~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~ 177 (997)
T TIGR01106 99 PQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNM-VPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADL 177 (997)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeE
Confidence 1224689998888877777788888888888888888755 456899999999999999999999999999999999999
Q ss_pred EEEecCcceecCCCCCCCCCeeeecCCC--------CceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCCh
Q 003371 268 LFLDGHSLQVDESSMTGESDHVEVDSTN--------NPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTP 339 (825)
Q Consensus 268 ili~g~~l~VDES~LTGEs~pv~k~~~~--------~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tp 339 (825)
++++|+++.||||+|||||.|+.|.+.. .+++|+||.|.+|.+.++|++||.+|.+|++.+.+.+...+++|
T Consensus 178 ~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~p 257 (997)
T TIGR01106 178 RIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENGKTP 257 (997)
T ss_pred EEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcccCCCc
Confidence 9999988899999999999999997532 25799999999999999999999999999999998877788899
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhH
Q 003371 340 LQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPL 419 (825)
Q Consensus 340 lq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lpl 419 (825)
+|+++++++..+..+++++++++|+++++ .+. .+...+..++++++++||||||+
T Consensus 258 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----------------------~~~~~~~~~i~v~v~~iP~~L~~ 312 (997)
T TIGR01106 258 IAIEIEHFIHIITGVAVFLGVSFFILSLI---LGY----------------------TWLEAVIFLIGIIVANVPEGLLA 312 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcC----------------------CHHHHHHHHHHHHhhcCCccchH
Confidence 99999999999998888777766665422 221 34456778899999999999999
Q ss_pred HHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEecccccccccc-------ccCChHHH
Q 003371 420 AVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETY-------CKIASSIR 492 (825)
Q Consensus 420 avtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~-------~~~~~~~~ 492 (825)
++++++++++++|+++|++||+++++|+||++++||||||||||+|+|+|.++|+++..+..+.. ........
T Consensus 313 ~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (997)
T TIGR01106 313 TVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATW 392 (997)
T ss_pred HHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHH
Confidence 99999999999999999999999999999999999999999999999999999987654432110 00111233
Q ss_pred HHHHHHHhhcCCccccccCCCCC----cceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEe
Q 003371 493 DLFHQGVGLNTTGSVSKLKPGSS----VAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRR 568 (825)
Q Consensus 493 ~~l~~~i~~n~~~~~~~~~~~~~----~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~ 568 (825)
+.+...+++|+++.... +..+ .....|+|+|.||++|+. +.+.+....+..++.++.+||+|+||||++++..
T Consensus 393 ~~ll~~~alcn~~~~~~--~~~~~~~~~~~~~gdp~E~ALl~~a~-~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~ 469 (997)
T TIGR01106 393 LALSRIAGLCNRAVFKA--GQENVPILKRAVAGDASESALLKCIE-LCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHEN 469 (997)
T ss_pred HHHHHHHHHcCCCeecc--ccCCCcccccccCcChHHHHHHHHHH-HhCCCHHHHHhhCceeEEeccCCCCceEEEEEec
Confidence 33445566666554432 1111 235679999999999997 5566677788889999999999999999998764
Q ss_pred c--CCCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhH-H
Q 003371 569 K--ADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVK-A 645 (825)
Q Consensus 569 ~--~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~-~ 645 (825)
. +++.+++|+|||||.|+++|++++ .+|...+++++.++.+++.+++|+++|+||+++|||+++.++........ .
T Consensus 470 ~~~~~~~~~~~~KGApe~Il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~ 548 (997)
T TIGR01106 470 EDPRDPRHLLVMKGAPERILERCSSIL-IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTD 548 (997)
T ss_pred cCCCCceEEEEEeCChHHHHHHhhHHh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccch
Confidence 3 234588999999999999999876 57888999999999999999999999999999999998653211100000 1
Q ss_pred hhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccc---------------
Q 003371 646 RQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQ--------------- 710 (825)
Q Consensus 646 ~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~--------------- 710 (825)
..+..|++|+|+|+++++||+||+++++|++|+++||+|+|+|||++.||.++|+++||+.++..
T Consensus 549 ~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~ 628 (997)
T TIGR01106 549 DVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQ 628 (997)
T ss_pred hhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccc
Confidence 11234889999999999999999999999999999999999999999999999999999865321
Q ss_pred ----cccceeeechhhhcCCHHHHHhhccCee--EEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEec
Q 003371 711 ----VEKGEVVEGVEFRNYTDEERIQKVDKIR--VMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSM 784 (825)
Q Consensus 711 ----~~~~~vi~G~~~~~~~~~~~~~~~~~~~--V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiam 784 (825)
.....+++|++++.++++++.+.+++.. ||||++|+||+++|+.||+.|++|||||||+||+||||+|||||||
T Consensus 629 ~~~~~~~~~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiam 708 (997)
T TIGR01106 629 VNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM 708 (997)
T ss_pred cccccccceEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceec
Confidence 0113799999999999999999998765 9999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhccccC
Q 003371 785 GIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCFC 824 (825)
Q Consensus 785 g~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~~ 824 (825)
|++|+|+||++||+||+||||++|+++++|||++|+||..
T Consensus 709 g~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k 748 (997)
T TIGR01106 709 GIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKK 748 (997)
T ss_pred CCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999964
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-118 Score=1078.91 Aligned_cols=633 Identities=27% Similarity=0.416 Sum_probs=555.6
Q ss_pred CHHHHHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCCCc
Q 003371 113 GVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEG 192 (825)
Q Consensus 113 gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~ 192 (825)
..+.+.+.|+++. +||+++| +++|+++||+|+++.++++++|+++|++|+++++++|++++++|++++ .
T Consensus 53 ~~~~v~~~l~~~~-~GLs~~e--a~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~--------~ 121 (902)
T PRK10517 53 PEEELWKTFDTHP-EGLNEAE--VESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE--------D 121 (902)
T ss_pred CHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc--------c
Confidence 5778888899986 6999865 999999999999999999999999999999999999999999999876 5
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeC------CEEEEEEecCcccCeEEEeCCCCeeece
Q 003371 193 WYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVRE------ARRLQISIFDLVVGDIVFLKIGDQIPAD 266 (825)
Q Consensus 193 ~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~------g~~~~I~~~dLvvGDIV~l~~Gd~VPaD 266 (825)
|++++.|++.+++..+++.+++++.++..++|.+.. +.+++|+|| |++++|+++||||||||.|++||+||||
T Consensus 122 ~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~-~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaD 200 (902)
T PRK10517 122 LFAAGVIALMVAISTLLNFIQEARSTKAADALKAMV-SNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPAD 200 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeee
Confidence 899999999999999999999999999999998764 567999999 7899999999999999999999999999
Q ss_pred EEEEecCcceecCCCCCCCCCeeeecCCC-----------CceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCC
Q 003371 267 GLFLDGHSLQVDESSMTGESDHVEVDSTN-----------NPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSN 335 (825)
Q Consensus 267 gili~g~~l~VDES~LTGEs~pv~k~~~~-----------~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~ 335 (825)
|++++|+++.||||+|||||.||.|.+.. ++.+|+||.|.+|.++++|++||.+|++|++.+.+.+...
T Consensus 201 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~ 280 (902)
T PRK10517 201 LRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDS 280 (902)
T ss_pred EEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCC
Confidence 99999998999999999999999997532 3589999999999999999999999999999999988888
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhcc
Q 003371 336 ERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPE 415 (825)
Q Consensus 336 ~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~ 415 (825)
+++|+|+.+++++.++..++++++.++++++. +.+. .+...+..++++++++|||
T Consensus 281 ~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~---~~~~----------------------~~~~~l~~alsv~V~~~Pe 335 (902)
T PRK10517 281 EPNAFQQGISRVSWLLIRFMLVMAPVVLLING---YTKG----------------------DWWEAALFALSVAVGLTPE 335 (902)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHH---HhcC----------------------CHHHHHHHHHHHHHHHccc
Confidence 89999999999999998887777766655432 2110 3456778899999999999
Q ss_pred chhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccccccccCChHHHHHH
Q 003371 416 GLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLF 495 (825)
Q Consensus 416 ~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l 495 (825)
|||+++++++++++++|+|+|++||+++++|+||++|+||||||||||+|+|+|.+++.... .+ ..+++
T Consensus 336 ~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~---------~~--~~~ll 404 (902)
T PRK10517 336 MLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISG---------KT--SERVL 404 (902)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCC---------CC--HHHHH
Confidence 99999999999999999999999999999999999999999999999999999998642111 00 11222
Q ss_pred HHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEE
Q 003371 496 HQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTH 575 (825)
Q Consensus 496 ~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~ 575 (825)
...++|+... ...|||+|.|++.++. ..+ .......++.++.+||+|++|+|+++++..++. ++
T Consensus 405 -~~a~l~~~~~-----------~~~~~p~d~All~~a~-~~~--~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~-~~ 468 (902)
T PRK10517 405 -HSAWLNSHYQ-----------TGLKNLLDTAVLEGVD-EES--ARSLASRWQKIDEIPFDFERRRMSVVVAENTEH-HQ 468 (902)
T ss_pred -HHHHhcCCcC-----------CCCCCHHHHHHHHHHH-hcc--hhhhhhcCceEEEeeeCCCcceEEEEEEECCCe-EE
Confidence 2233443211 1258999999999886 322 223455688899999999999999998765443 77
Q ss_pred EEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeE
Q 003371 576 IHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLT 655 (825)
Q Consensus 576 ~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~ 655 (825)
+++|||||.|+++|+++.. +|...+++++.++.+.+.+++|+++|+|++++|||+++.++.. .....|+|++
T Consensus 469 ~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~-------~~~~~e~~l~ 540 (902)
T PRK10517 469 LICKGALEEILNVCSQVRH-NGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGD-------YQRADESDLI 540 (902)
T ss_pred EEEeCchHHHHHhchhhhc-CCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccc-------cccccccCce
Confidence 9999999999999998754 6777899999999999999999999999999999988542211 0111367999
Q ss_pred EeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhcc
Q 003371 656 LLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVD 735 (825)
Q Consensus 656 llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~ 735 (825)
|+|+++|+||+||+++++|++|+++||+|+|+||||+.||.+||++|||.. ..+++|++++.++++++.+.++
T Consensus 541 ~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~-------~~v~~G~el~~l~~~el~~~~~ 613 (902)
T PRK10517 541 LEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA-------GEVLIGSDIETLSDDELANLAE 613 (902)
T ss_pred eeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc-------cCceeHHHHHhCCHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999952 3589999999999999999999
Q ss_pred CeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHh
Q 003371 736 KIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPG 815 (825)
Q Consensus 736 ~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~g 815 (825)
+..||||++|+||+++|+.||++|++|||||||+|||||||+|||||||| +|||+||++|||||+||||++|+++++||
T Consensus 614 ~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~~g 692 (902)
T PRK10517 614 RTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEG 692 (902)
T ss_pred hCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHhhccccCC
Q 003371 816 DQLHSGCFCW 825 (825)
Q Consensus 816 R~i~~ni~~~ 825 (825)
|++|+||.+|
T Consensus 693 R~i~~nI~k~ 702 (902)
T PRK10517 693 RRTFANMLKY 702 (902)
T ss_pred HHHHHHHHHH
Confidence 9999999764
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-117 Score=1078.16 Aligned_cols=642 Identities=26% Similarity=0.399 Sum_probs=557.7
Q ss_pred CHHHHHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhhcccc---CCC
Q 003371 113 GVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKE---HGA 189 (825)
Q Consensus 113 gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g~~~---~g~ 189 (825)
..+.+.+.|+++ .+||++++ +++|+++||+|+++.++++++|.+++++|++++.++|++++++|++++... ++.
T Consensus 31 ~~~~v~~~l~~~-~~GLs~~e--a~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~ 107 (903)
T PRK15122 31 SLEETLANLNTH-RQGLTEED--AAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGE 107 (903)
T ss_pred CHHHHHHHhCCC-CCCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCc
Confidence 567788889998 47998866 999999999999999999999999999999999999999999999887432 223
Q ss_pred CCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeC------CEEEEEEecCcccCeEEEeCCCCee
Q 003371 190 EEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVRE------ARRLQISIFDLVVGDIVFLKIGDQI 263 (825)
Q Consensus 190 ~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~------g~~~~I~~~dLvvGDIV~l~~Gd~V 263 (825)
...|++++.|++.+++..+++.+++|+.++..++|.+.. +..++|+|| |++++|+++||||||+|.|++||+|
T Consensus 108 ~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~-~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~I 186 (903)
T PRK15122 108 ETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMV-RTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMI 186 (903)
T ss_pred cccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEE
Confidence 346999999999999999999999999999999998764 567999999 4899999999999999999999999
Q ss_pred eceEEEEecCcceecCCCCCCCCCeeeecCC---------------------CCceeeeCceeeeceEEEEEEEEcccch
Q 003371 264 PADGLFLDGHSLQVDESSMTGESDHVEVDST---------------------NNPFLFSGSKVADGYAQMLVVSVGMNTA 322 (825)
Q Consensus 264 PaDgili~g~~l~VDES~LTGEs~pv~k~~~---------------------~~~~l~sGt~v~~G~~~~~V~~vG~~T~ 322 (825)
||||++++|+++.||||+|||||.||.|.+. .++.+|+||.|.+|.++++|++||.+|+
T Consensus 187 PaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~ 266 (903)
T PRK15122 187 PADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTY 266 (903)
T ss_pred eeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccH
Confidence 9999999999999999999999999999741 1378999999999999999999999999
Q ss_pred HHHHHhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHH
Q 003371 323 WGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIV 402 (825)
Q Consensus 323 ~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (825)
+|++.+++.+ ...++|+|+++++++.++..+++.++.+++++. ++... .+...+
T Consensus 267 ~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~---~~~~~----------------------~~~~~l 320 (903)
T PRK15122 267 FGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLIN---GFTKG----------------------DWLEAL 320 (903)
T ss_pred hhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhh---hhccC----------------------CHHHHH
Confidence 9999999876 667899999999999988887766655444332 11110 345677
Q ss_pred HHHHHHHHHHhccchhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEecccccccc
Q 003371 403 AAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQE 482 (825)
Q Consensus 403 ~~av~ilvvavP~~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 482 (825)
..++++++++||||||++++++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..... .
T Consensus 321 ~~aisl~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~-~-- 397 (903)
T PRK15122 321 LFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR-K-- 397 (903)
T ss_pred HHHHHHHHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC-C--
Confidence 8899999999999999999999999999999999999999999999999999999999999999999998743221 0
Q ss_pred ccccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCcee
Q 003371 483 TYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRS 562 (825)
Q Consensus 483 ~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krm 562 (825)
.+ +++.. .++|+.. . ..+|||+|.|++.|+. +.+.+ ..+..++.++.+||++.+|+|
T Consensus 398 -----~~---~~l~~-a~l~s~~--~---------~~~~~p~e~All~~a~-~~~~~--~~~~~~~~~~~~pF~s~~k~m 454 (903)
T PRK15122 398 -----DE---RVLQL-AWLNSFH--Q---------SGMKNLMDQAVVAFAE-GNPEI--VKPAGYRKVDELPFDFVRRRL 454 (903)
T ss_pred -----hH---HHHHH-HHHhCCC--C---------CCCCChHHHHHHHHHH-HcCch--hhhhcCceEEEeeeCCCcCEE
Confidence 11 22222 2234211 0 1268999999999997 55532 234567889999999999999
Q ss_pred EEEEEecCCCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccch
Q 003371 563 GVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNND 642 (825)
Q Consensus 563 svvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~ 642 (825)
+++++..+++ +++++|||||.|+++|+++.. +|...+++++.++++.+.+++|+.+|+|++++|||+++.++...
T Consensus 455 s~v~~~~~~~-~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~--- 529 (903)
T PRK15122 455 SVVVEDAQGQ-HLLICKGAVEEMLAVATHVRD-GDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRA--- 529 (903)
T ss_pred EEEEEcCCCc-EEEEECCcHHHHHHhchhhhc-CCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCcccccc---
Confidence 9998765554 789999999999999998754 67788999999999999999999999999999999885422100
Q ss_pred hHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhh
Q 003371 643 VKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEF 722 (825)
Q Consensus 643 ~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~ 722 (825)
......|+|++|+|+++|+||+||+++++|++|+++||+|+|+||||+.||.+||++|||.. ..+++|+++
T Consensus 530 --~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~-------~~vi~G~el 600 (903)
T PRK15122 530 --QYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP-------GEPLLGTEI 600 (903)
T ss_pred --ccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC-------CCccchHhh
Confidence 01112467999999999999999999999999999999999999999999999999999953 358999999
Q ss_pred hcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeecc
Q 003371 723 RNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILD 802 (825)
Q Consensus 723 ~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlld 802 (825)
+.++++++.+.+++..||||++|+||+++|+.||++|++|||||||+|||||||+|||||||| +|||+||++|||||+|
T Consensus 601 ~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLld 679 (903)
T PRK15122 601 EAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLE 679 (903)
T ss_pred hhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEec
Confidence 999999999999999999999999999999999999999999999999999999999999999 8999999999999999
Q ss_pred CCchHHHHHHHHhHHhhccccCC
Q 003371 803 DDFTSVATVLSPGDQLHSGCFCW 825 (825)
Q Consensus 803 d~f~sIv~~i~~gR~i~~ni~~~ 825 (825)
|||++|+++++|||++|+||..|
T Consensus 680 d~f~~Iv~ai~~gR~i~~nI~k~ 702 (903)
T PRK15122 680 KSLMVLEEGVIKGRETFGNIIKY 702 (903)
T ss_pred CChHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999754
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-117 Score=1072.74 Aligned_cols=632 Identities=26% Similarity=0.401 Sum_probs=556.1
Q ss_pred CHHHHHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCCCc
Q 003371 113 GVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEG 192 (825)
Q Consensus 113 gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~ 192 (825)
.++++.+.|+++. +||++++ +.+|+++||+|++++++++++|++++++|.++++++|++++++|++++ .
T Consensus 19 ~~~~~~~~l~~~~-~GLs~~e--v~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~--------~ 87 (867)
T TIGR01524 19 GKETLLRKLGVHE-TGLTNVE--VTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD--------D 87 (867)
T ss_pred CHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh--------h
Confidence 6889999999985 6998865 999999999999999988899999999999999999999999999875 5
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEe------CCEEEEEEecCcccCeEEEeCCCCeeece
Q 003371 193 WYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVR------EARRLQISIFDLVVGDIVFLKIGDQIPAD 266 (825)
Q Consensus 193 ~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R------~g~~~~I~~~dLvvGDIV~l~~Gd~VPaD 266 (825)
|++++.|++.+++..++..+.+++.++..++|.+.. +..++|+| ||++++|+++||||||||.|++||+||||
T Consensus 88 ~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~-~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaD 166 (867)
T TIGR01524 88 LEATVIIALMVLASGLLGFIQESRAERAAYALKNMV-KNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPAD 166 (867)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEccc
Confidence 899999999999999999999999999999998764 46899999 99999999999999999999999999999
Q ss_pred EEEEecCcceecCCCCCCCCCeeeecCCC-----------CceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCC
Q 003371 267 GLFLDGHSLQVDESSMTGESDHVEVDSTN-----------NPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSN 335 (825)
Q Consensus 267 gili~g~~l~VDES~LTGEs~pv~k~~~~-----------~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~ 335 (825)
|++++|+++.||||+|||||.|+.|.+.. ++++|+||.|.+|.++++|++||.+|++|++.+.+.+ ..
T Consensus 167 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~-~~ 245 (867)
T TIGR01524 167 ARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATE-RR 245 (867)
T ss_pred EEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhC-CC
Confidence 99999998999999999999999997532 3689999999999999999999999999999999977 67
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhcc
Q 003371 336 ERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPE 415 (825)
Q Consensus 336 ~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~ 415 (825)
.++|+|+++++++.++..+++++++++|+++. +.+. .+...+..++++++++|||
T Consensus 246 ~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~---~~~~----------------------~~~~~~~~al~l~v~~iP~ 300 (867)
T TIGR01524 246 GQTAFDKGVKSVSKLLIRFMLVMVPVVLMING---LMKG----------------------DWLEAFLFALAVAVGLTPE 300 (867)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHheehHH---HhcC----------------------CHHHHHHHHHHHHHHhCcc
Confidence 78999999999999999888887776665532 1110 3456788899999999999
Q ss_pred chhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccccccccCChHHHHHH
Q 003371 416 GLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLF 495 (825)
Q Consensus 416 ~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l 495 (825)
|||++++++++.++++|+|+|++||+++++|+||++|+||||||||||+|+|+|++++..... . ..+++
T Consensus 301 ~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~---------~--~~~~l 369 (867)
T TIGR01524 301 MLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGE---------T--SERVL 369 (867)
T ss_pred hHHHHHHHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCC---------C--HHHHH
Confidence 999999999999999999999999999999999999999999999999999999997632110 0 11222
Q ss_pred HHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEE
Q 003371 496 HQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTH 575 (825)
Q Consensus 496 ~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~ 575 (825)
. .+++|+... ..++||+|+|++.++. +. .....+..++.++.+||+|++|+|+++++..++ .++
T Consensus 370 ~-~a~l~~~~~-----------~~~~~p~~~Al~~~~~-~~--~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~-~~~ 433 (867)
T TIGR01524 370 K-MAWLNSYFQ-----------TGWKNVLDHAVLAKLD-ES--AARQTASRWKKVDEIPFDFDRRRLSVVVENRAE-VTR 433 (867)
T ss_pred H-HHHHhCCCC-----------CCCCChHHHHHHHHHH-hh--chhhHhhcCceEEEeccCCCcCEEEEEEEcCCc-eEE
Confidence 2 223343210 1257999999999986 32 223445678889999999999999999875443 478
Q ss_pred EEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeE
Q 003371 576 IHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLT 655 (825)
Q Consensus 576 ~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~ 655 (825)
+++|||||.++++|+++.. +|...+++++.++.+++.+++|+++|+|++++|||+++.++... ....|++|+
T Consensus 434 ~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~-------~~~~e~~l~ 505 (867)
T TIGR01524 434 LICKGAVEEMLTVCTHKRF-GGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADF-------TKTDEEQLI 505 (867)
T ss_pred EEEeCcHHHHHHhchhhhc-CCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccc-------cccccCCcE
Confidence 9999999999999997754 67778999988999999999999999999999999886522110 111367999
Q ss_pred EeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhcc
Q 003371 656 LLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVD 735 (825)
Q Consensus 656 llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~ 735 (825)
|+|+++|+||+||+++++|++|+++||+|+|+||||+.||.+||+++||.. ..+++|.+++.++++++.+.++
T Consensus 506 ~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~-------~~v~~g~~l~~~~~~el~~~~~ 578 (867)
T TIGR01524 506 IEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA-------NDFLLGADIEELSDEELARELR 578 (867)
T ss_pred EEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC-------CCeeecHhhhhCCHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999963 2589999999999999999999
Q ss_pred CeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHh
Q 003371 736 KIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPG 815 (825)
Q Consensus 736 ~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~g 815 (825)
+..||||++|+||+++|+.||++|++|||||||+||+|||++|||||||| +|||+||++|||||+||||++|+++++||
T Consensus 579 ~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~~g 657 (867)
T TIGR01524 579 KYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEG 657 (867)
T ss_pred hCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 89999999999999999999999999999
Q ss_pred HHhhccccCC
Q 003371 816 DQLHSGCFCW 825 (825)
Q Consensus 816 R~i~~ni~~~ 825 (825)
|++|+||..|
T Consensus 658 R~i~~ni~k~ 667 (867)
T TIGR01524 658 RNTFGNILKY 667 (867)
T ss_pred HHHHHHHHHH
Confidence 9999999753
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-116 Score=1072.12 Aligned_cols=645 Identities=34% Similarity=0.540 Sum_probs=568.3
Q ss_pred CHHHHHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHh-hhHHHHHHHHHHHHHhhhccccCCCCC
Q 003371 113 GVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAF-KDTTILILLVCAALSLGFGIKEHGAEE 191 (825)
Q Consensus 113 gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~-~~~~~~il~v~a~lsl~~g~~~~g~~~ 191 (825)
.++++.+.|+++..+||+++ +++++|++.||+|+++.++++++|++++++| +++++++|++++++|+++|
T Consensus 8 ~~~~v~~~l~t~~~~GLs~~-~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g-------- 78 (884)
T TIGR01522 8 SVEETCSKLQTDLQNGLNSS-QEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG-------- 78 (884)
T ss_pred CHHHHHHHhCcCcccCCCcH-HHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc--------
Confidence 68999999999999999833 3599999999999999998899999999999 9999999999999999887
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEe
Q 003371 192 GWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLD 271 (825)
Q Consensus 192 ~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~ 271 (825)
.|.|++.|+++++++++++.+++|+.++.+++|.+. .+.+++|+|||++++|+++||||||||.|++||+|||||++++
T Consensus 79 ~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l-~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~ 157 (884)
T TIGR01522 79 NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKL-VPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVE 157 (884)
T ss_pred chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEE
Confidence 599999999889999999999999999999999866 4567999999999999999999999999999999999999999
Q ss_pred cCcceecCCCCCCCCCeeeecCCC------------CceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCCh
Q 003371 272 GHSLQVDESSMTGESDHVEVDSTN------------NPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTP 339 (825)
Q Consensus 272 g~~l~VDES~LTGEs~pv~k~~~~------------~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tp 339 (825)
|+.+.||||+|||||.|+.|.+.. ++++|+||.|.+|.++++|++||.+|++|++.+.+.+....++|
T Consensus 158 g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~kt~ 237 (884)
T TIGR01522 158 AVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTP 237 (884)
T ss_pred cCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCCCc
Confidence 988899999999999999998532 36899999999999999999999999999999999888888999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhH
Q 003371 340 LQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPL 419 (825)
Q Consensus 340 lq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lpl 419 (825)
+|+.+++++.++..++++++++++++ .|+.+. .+...+..++++++++||||||+
T Consensus 238 lq~~l~~l~~~~~~~~~~~~~~~~~~---~~~~~~----------------------~~~~~~~~~v~llv~aiP~~Lp~ 292 (884)
T TIGR01522 238 LQKSMDLLGKQLSLVSFGVIGVICLV---GWFQGK----------------------DWLEMFTISVSLAVAAIPEGLPI 292 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhcC----------------------CHHHHHHHHHHHHHHHccchHHH
Confidence 99999999999988776555444333 233221 35567888999999999999999
Q ss_pred HHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccc--------cc--------
Q 003371 420 AVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQ--------ET-------- 483 (825)
Q Consensus 420 avtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~--------~~-------- 483 (825)
++|++++++++||+++|++||+++++|+||++|+||||||||||+|+|+|.++|..+..... ..
T Consensus 293 ~vt~~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (884)
T TIGR01522 293 IVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDV 372 (884)
T ss_pred HHHHHHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccc
Confidence 99999999999999999999999999999999999999999999999999999876532110 00
Q ss_pred -cccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCcee
Q 003371 484 -YCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRS 562 (825)
Q Consensus 484 -~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krm 562 (825)
....++...+++..+..|| .+.... .+ ....|||+|+|+++++. +.|.+ ..+..++.++.+||+|++|||
T Consensus 373 ~~~~~~~~~~~~l~~~~l~~-~~~~~~---~~--~~~~g~p~e~All~~~~-~~~~~--~~~~~~~~~~~~pF~s~~k~m 443 (884)
T TIGR01522 373 LHGFYTVAVSRILEAGNLCN-NAKFRN---EA--DTLLGNPTDVALIELLM-KFGLD--DLRETYIRVAEVPFSSERKWM 443 (884)
T ss_pred cccccCHHHHHHHHHHhhhC-CCeecC---CC--CCcCCChHHHHHHHHHH-HcCcH--hHHhhCcEEeEeCCCCCCCeE
Confidence 0001223344554444333 333221 11 13468999999999997 66653 445568899999999999999
Q ss_pred EEEEEecCCCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccch
Q 003371 563 GVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNND 642 (825)
Q Consensus 563 svvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~ 642 (825)
+++++...++++++|+|||||.|+..|++++..+|...+++++.++.+.+.+++|+.+|+|++++||++++
T Consensus 444 ~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~~--------- 514 (884)
T TIGR01522 444 AVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEK--------- 514 (884)
T ss_pred EEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCC---------
Confidence 99988754556889999999999999999988788888999999999999999999999999999998762
Q ss_pred hHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhh
Q 003371 643 VKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEF 722 (825)
Q Consensus 643 ~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~ 722 (825)
++|+|+|+++++||+|||++++|+.|+++||+|+|+|||+..||.+||++|||... ...+++|+++
T Consensus 515 ---------~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~-----~~~~v~g~~l 580 (884)
T TIGR01522 515 ---------GQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSK-----TSQSVSGEKL 580 (884)
T ss_pred ---------CCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC-----CCceeEhHHh
Confidence 37999999999999999999999999999999999999999999999999999864 3457899999
Q ss_pred hcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeecc
Q 003371 723 RNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILD 802 (825)
Q Consensus 723 ~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlld 802 (825)
+.++++++.+.+++..||||++|+||..+|+.||++|++|+|||||+||+|||++||||||||.+|+++||++||++|+|
T Consensus 581 ~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~d 660 (884)
T TIGR01522 581 DAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTD 660 (884)
T ss_pred HhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999988999999999999999
Q ss_pred CCchHHHHHHHHhHHhhccccC
Q 003371 803 DDFTSVATVLSPGDQLHSGCFC 824 (825)
Q Consensus 803 d~f~sIv~~i~~gR~i~~ni~~ 824 (825)
|||++|+++++|||++|+||..
T Consensus 661 d~~~~i~~~i~~gR~~~~ni~k 682 (884)
T TIGR01522 661 DDFATILSAIEEGKGIFNNIKN 682 (884)
T ss_pred CCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999864
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-113 Score=1023.20 Aligned_cols=599 Identities=26% Similarity=0.405 Sum_probs=526.3
Q ss_pred CCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCCCcchhhhHHHHHHHHHH
Q 003371 128 GINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVI 207 (825)
Q Consensus 128 Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~~~d~~~i~~~v~lv~ 207 (825)
||++++ +++|+++||+|+++++ ++++|..++++|.+++.++|++++++|+++| .|+|++.|++.+++..
T Consensus 1 GLs~~e--a~~r~~~~G~N~~~~~-~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~--------~~~~~~~i~~~~~i~~ 69 (755)
T TIGR01647 1 GLTSAE--AKKRLAKYGPNELPEK-KVSPLLKFLGFFWNPLSWVMEAAAIIAIALE--------NWVDFVIILGLLLLNA 69 (755)
T ss_pred CcCHHH--HHHHHHhcCCCCCCCC-CCCHHHHHHHHHhchHHHHHHHHHHHHHhhc--------chhhhhhhhhhhHHHH
Confidence 787765 9999999999999975 4567899999999999999999999999887 5999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCcceecCCCCCCCCC
Q 003371 208 VVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESD 287 (825)
Q Consensus 208 ~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l~VDES~LTGEs~ 287 (825)
.++.+++|+.++..++|.+. .+.+++|+|||++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.
T Consensus 70 ~i~~~qe~~a~~~~~~L~~~-~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~ 148 (755)
T TIGR01647 70 TIGFIEENKAGNAVEALKQS-LAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESL 148 (755)
T ss_pred HHHHHHHHHHHHHHHHHHhh-CCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCcc
Confidence 99999999999999998755 46789999999999999999999999999999999999999999978999999999999
Q ss_pred eeeecCCCCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003371 288 HVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLL 367 (825)
Q Consensus 288 pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~ 367 (825)
||.|. .++.+|+||.|.+|.++++|++||.+|++|++.+++.+....++|+|+.+++++.++..+.++++++++++++
T Consensus 149 PV~K~--~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~ 226 (755)
T TIGR01647 149 PVTKK--TGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLF 226 (755)
T ss_pred ceEec--cCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998 5789999999999999999999999999999999998888888999999999999998887777776666543
Q ss_pred HHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhccccccccchhhhc
Q 003371 368 ARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACET 447 (825)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~ 447 (825)
.. .+. .+...+..++++++++|||+||+++++++++++++|+|+|++||+++++|+
T Consensus 227 ~~--~~~----------------------~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~ 282 (755)
T TIGR01647 227 FG--RGE----------------------SFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEE 282 (755)
T ss_pred HH--cCC----------------------CHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHh
Confidence 20 110 455678889999999999999999999999999999999999999999999
Q ss_pred ccCeEEEEecCcCccccCceEEEEEEeccccccccccccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHH
Q 003371 448 MGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKA 527 (825)
Q Consensus 448 lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~A 527 (825)
||++|+||||||||||+|+|+|.+++..+..++ + .+++..+. +++. +.++||+|+|
T Consensus 283 lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~--------~--~~~l~~a~-~~~~-------------~~~~~pi~~A 338 (755)
T TIGR01647 283 LAGMDILCSDKTGTLTLNKLSIDEILPFFNGFD--------K--DDVLLYAA-LASR-------------EEDQDAIDTA 338 (755)
T ss_pred ccCCcEEEecCCCccccCceEEEEEEecCCCCC--------H--HHHHHHHH-HhCC-------------CCCCChHHHH
Confidence 999999999999999999999999987542111 1 12333332 2221 1257999999
Q ss_pred HHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhH
Q 003371 528 VLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGR 607 (825)
Q Consensus 528 ll~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~ 607 (825)
+++++. +.+ ..+..+++++.+||++.+|+|+++++..++++.+.++||+||.++++|++. ++.+
T Consensus 339 i~~~~~-~~~----~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-----------~~~~ 402 (755)
T TIGR01647 339 VLGSAK-DLK----EARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-----------KEIE 402 (755)
T ss_pred HHHHHH-HhH----HHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-----------HHHH
Confidence 999886 322 334568889999999999999998876543446678999999999999742 3456
Q ss_pred HHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEE
Q 003371 608 SQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMI 687 (825)
Q Consensus 608 ~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mv 687 (825)
+++++.+++|+.+|+|++++|||+. |++|+|+|+++|+||+||+++++|++||++||+|+|+
T Consensus 403 ~~~~~~~~~~~~~G~rvl~vA~~~~------------------e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~mi 464 (755)
T TIGR01647 403 EKVEEKVDELASRGYRALGVARTDE------------------EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMV 464 (755)
T ss_pred HHHHHHHHHHHhCCCEEEEEEEEcC------------------CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEE
Confidence 7788899999999999999999732 3589999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcC
Q 003371 688 TGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGD 767 (825)
Q Consensus 688 TGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GD 767 (825)
||||+.||++||++|||.... .....+.+|.++..++++++.+.++++.||||++|+||+++|+.||++|++||||||
T Consensus 465 TGD~~~tA~~IA~~lGI~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGD 542 (755)
T TIGR01647 465 TGDHLAIAKETARRLGLGTNI--YTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGD 542 (755)
T ss_pred CCCCHHHHHHHHHHcCCCCCC--cCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcC
Confidence 999999999999999996521 112345667777889999999999999999999999999999999999999999999
Q ss_pred CccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhccccCC
Q 003371 768 GTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCFCW 825 (825)
Q Consensus 768 G~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~~~ 825 (825)
|+||+|||++|||||||| +|||+||++|||||+||||++|+++++|||++|+||.+|
T Consensus 543 GvNDapAL~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~ 599 (755)
T TIGR01647 543 GVNDAPALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSY 599 (755)
T ss_pred CcccHHHHHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 899999999999999999999999999999999999653
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-110 Score=1022.25 Aligned_cols=643 Identities=33% Similarity=0.485 Sum_probs=546.1
Q ss_pred HHHHhhhHHHHHHHHHHHHHhhhccccCCC--CCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEe
Q 003371 160 VLEAFKDTTILILLVCAALSLGFGIKEHGA--EEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVR 237 (825)
Q Consensus 160 ~~~~~~~~~~~il~v~a~lsl~~g~~~~g~--~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R 237 (825)
++++|+++++++|++++++|+++++..++. ...|++++.|++++++..+++.+++++.++.+++|.+. .+.+++|+|
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~-~~~~~~ViR 79 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEY-ESEHAKVLR 79 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCceEEEE
Confidence 478999999999999999999998665333 24799999999999999999999999999999999865 567899999
Q ss_pred CCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCcceecCCCCCCCCCeeeecCC-----------CCceeeeCceee
Q 003371 238 EARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDST-----------NNPFLFSGSKVA 306 (825)
Q Consensus 238 ~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l~VDES~LTGEs~pv~k~~~-----------~~~~l~sGt~v~ 306 (825)
||++++|++.||||||||.|++||+|||||++++|+++.||||+|||||.|+.|.+. .++++|+||.|.
T Consensus 80 dg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~ 159 (917)
T TIGR01116 80 DGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVV 159 (917)
T ss_pred CCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEe
Confidence 999999999999999999999999999999999998889999999999999999742 238899999999
Q ss_pred eceEEEEEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccC
Q 003371 307 DGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNG 386 (825)
Q Consensus 307 ~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~ 386 (825)
+|.+.++|++||.+|+.|++.+++.....++||+|+++++++.++..+.+++++++|++++.+|.... +.
T Consensus 160 ~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~---------~~- 229 (917)
T TIGR01116 160 AGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPA---------LG- 229 (917)
T ss_pred cceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---------cc-
Confidence 99999999999999999999999988888899999999999999988887777776665533221100 00
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCc
Q 003371 387 SNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQ 466 (825)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~ 466 (825)
...+..+...+..++++++++||||||+++++++++++++|++++++||+++++|+||++|+||||||||||+|+
T Consensus 230 -----~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~ 304 (917)
T TIGR01116 230 -----GGWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQ 304 (917)
T ss_pred -----chhHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCe
Confidence 011225566777889999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEeccccc-------------ccccc--c------cCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhH
Q 003371 467 MKVTKFWLGQESI-------------VQETY--C------KIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTE 525 (825)
Q Consensus 467 m~v~~~~~~~~~~-------------~~~~~--~------~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e 525 (825)
|+|.+++..+... .+... . .......+.+....++|+++..... +.++..+..|+|+|
T Consensus 305 m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~-~~~~~~~~~gdp~E 383 (917)
T TIGR01116 305 MSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFN-ERKGVYEKVGEATE 383 (917)
T ss_pred EEEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeecc-ccCCceeeccChhH
Confidence 9999998765211 00000 0 0011223334455667766654321 12223345799999
Q ss_pred HHHHHHHHHHcCCchHH----------------HhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhc
Q 003371 526 KAVLSWAVLEMGMEMDK----------------VKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMC 589 (825)
Q Consensus 526 ~All~~a~~~~g~~~~~----------------~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c 589 (825)
.||++|+. +.|.+... .++.+++++.+||+|+||||+|+++.. + ++++|+|||||.|+++|
T Consensus 384 ~ALl~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~-~-~~~~~~KGApe~il~~c 460 (917)
T TIGR01116 384 AALKVLVE-KMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPS-T-GNKLFVKGAPEGVLERC 460 (917)
T ss_pred HHHHHHHH-HcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeC-C-cEEEEEcCChHHHHHhc
Confidence 99999998 78766432 345688999999999999999999753 3 38899999999999999
Q ss_pred ccccccCCeeecCChhhHHHHHHHHHHHhh-ccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcc
Q 003371 590 SHYYESNGVIKSMDGNGRSQMENIIHGMAA-SSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRP 668 (825)
Q Consensus 590 ~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~-~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~ 668 (825)
++++..+|...+++++.++++++.+++|++ +|+||+++|||+++.++...........+..|++|+|+|+++++||+||
T Consensus 461 ~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~ 540 (917)
T TIGR01116 461 THILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRP 540 (917)
T ss_pred cceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCch
Confidence 999887888999999999999999999999 9999999999998652211100001122446889999999999999999
Q ss_pred cHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHH
Q 003371 669 GVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDK 748 (825)
Q Consensus 669 ~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK 748 (825)
+++++|+.||++||+++|+|||+..||.+||+++||..++.. ....+++|+++..++++++.+..++..||||++|+||
T Consensus 541 ~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~-v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K 619 (917)
T TIGR01116 541 EVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDED-VTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHK 619 (917)
T ss_pred hHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCcc-ccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHH
Confidence 999999999999999999999999999999999999864321 1235799999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhccccC
Q 003371 749 LLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCFC 824 (825)
Q Consensus 749 ~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~~ 824 (825)
.++|+.||+.|++|+|+|||+||+|||++|||||||| +|+++||++||++++||||++|+++++|||++|+||.+
T Consensus 620 ~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k 694 (917)
T TIGR01116 620 SELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQ 694 (917)
T ss_pred HHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 89999999999999999999999999999999999964
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-108 Score=1019.09 Aligned_cols=635 Identities=23% Similarity=0.321 Sum_probs=515.7
Q ss_pred CCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCCCcchhhhHHHHHHHH
Q 003371 126 EYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFL 205 (825)
Q Consensus 126 ~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~~~d~~~i~~~v~l 205 (825)
..||+.++ +.+|++.||.|+++.|+ ++||+++++++.+|+++++++|+++++..+ .|++++.|++++++
T Consensus 137 ~~GLs~~e--~~~r~~~yG~N~i~~~~-~s~~~ll~~~~~~p~~i~~i~~~~l~~~~~--------~~~~~~~i~~i~~~ 205 (1054)
T TIGR01657 137 SNGLTTGD--IAQRKAKYGKNEIEIPV-PSFLELLKEEVLHPFYVFQVFSVILWLLDE--------YYYYSLCIVFMSST 205 (1054)
T ss_pred ccCCCHHH--HHHHHHhcCCCeeecCC-CCHHHHHHHHHhchHHHHHHHHHHHHHhhh--------hHHHHHHHHHHHHH
Confidence 46998865 99999999999999864 799999999999999999999877776432 58898888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEEEEEEecCcccCeEEEeC--CCCeeeceEEEEecCcceecCCCCC
Q 003371 206 VIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLK--IGDQIPADGLFLDGHSLQVDESSMT 283 (825)
Q Consensus 206 v~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~--~Gd~VPaDgili~g~~l~VDES~LT 283 (825)
..+++.+.+++..++++++.. ++..++|+|||++++|++.||||||||.|+ +||+|||||++++|+ +.||||+||
T Consensus 206 ~~~~~~~~~~k~~~~L~~~~~--~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LT 282 (1054)
T TIGR01657 206 SISLSVYQIRKQMQRLRDMVH--KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLT 282 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHhhc--CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEeccccc
Confidence 777766666666555555432 357899999999999999999999999999 999999999999996 699999999
Q ss_pred CCCCeeeecCC----------------CCceeeeCceeee-------ceEEEEEEEEcccchHHHHHhhccCCCCCCChh
Q 003371 284 GESDHVEVDST----------------NNPFLFSGSKVAD-------GYAQMLVVSVGMNTAWGEMMSSISSDSNERTPL 340 (825)
Q Consensus 284 GEs~pv~k~~~----------------~~~~l~sGt~v~~-------G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tpl 340 (825)
|||.|+.|.+. +++++|+||.|.+ |.+.++|++||.+|..|++.+++.......+++
T Consensus 283 GES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~ 362 (1054)
T TIGR01657 283 GESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKF 362 (1054)
T ss_pred CCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCch
Confidence 99999999752 2357999999995 889999999999999999999998888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHH
Q 003371 341 QARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLA 420 (825)
Q Consensus 341 q~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lpla 420 (825)
++.+.++...+. ++|++.++++++.++... . .+...+..++++++++|||+||++
T Consensus 363 ~~~~~~~~~~l~----~~a~i~~i~~~~~~~~~~------~---------------~~~~~~l~~l~iiv~~vP~~LP~~ 417 (1054)
T TIGR01657 363 YKDSFKFILFLA----VLALIGFIYTIIELIKDG------R---------------PLGKIILRSLDIITIVVPPALPAE 417 (1054)
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHHcC------C---------------cHHHHHHHHHHHHHhhcCchHHHH
Confidence 988877755443 333333333222222110 0 456778889999999999999999
Q ss_pred HHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccc-cccccCChHHHHHHHHHH
Q 003371 421 VTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQ-ETYCKIASSIRDLFHQGV 499 (825)
Q Consensus 421 vtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~i 499 (825)
++++++++++||+|++++||++.++|++|++|+||||||||||+|+|+|.+++..+..... .............+...+
T Consensus 418 ~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (1054)
T TIGR01657 418 LSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKAL 497 (1054)
T ss_pred HHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999875432110 000000001122334455
Q ss_pred hhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCc----hHH----------HhhcceEEEEecCCCCCceeEEE
Q 003371 500 GLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGME----MDK----------VKQKYSILHVETFNSEKKRSGVL 565 (825)
Q Consensus 500 ~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~----~~~----------~~~~~~i~~~~~F~s~~krmsvv 565 (825)
++|++.... + + +..|||+|.|+++++.+....+ ... ....+++++.+||+|++|||||+
T Consensus 498 a~C~~~~~~---~--~--~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvv 570 (1054)
T TIGR01657 498 ATCHSLTKL---E--G--KLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVI 570 (1054)
T ss_pred HhCCeeEEE---C--C--EEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEE
Confidence 566654322 1 1 5789999999999764222110 000 02468899999999999999999
Q ss_pred EEecCCCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHH
Q 003371 566 IRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKA 645 (825)
Q Consensus 566 v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~ 645 (825)
++..+++++++|+|||||.|+++|++. ..++.+.+.+++|+++|+||||+|||++++.+ .......
T Consensus 571 v~~~~~~~~~~~~KGApE~Il~~c~~~------------~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~--~~~~~~~ 636 (1054)
T TIGR01657 571 VSTNDERSPDAFVKGAPETIQSLCSPE------------TVPSDYQEVLKSYTREGYRVLALAYKELPKLT--LQKAQDL 636 (1054)
T ss_pred EEEcCCCeEEEEEECCHHHHHHHcCCc------------CCChhHHHHHHHHHhcCCEEEEEEEeecCccc--hhhhhhc
Confidence 987665568899999999999999841 23567888999999999999999999986411 1100112
Q ss_pred hhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccc---------------
Q 003371 646 RQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQ--------------- 710 (825)
Q Consensus 646 ~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~--------------- 710 (825)
.++..|+||+|+|+++|+||+||+++++|+.|++|||+|+|+||||+.||.+||++|||+.++..
T Consensus 637 ~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~ 716 (1054)
T TIGR01657 637 SRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPN 716 (1054)
T ss_pred cHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCc
Confidence 34567899999999999999999999999999999999999999999999999999999865421
Q ss_pred ---------------------------------cccceeeechhhhc---CCHHHHHhhccCeeEEEecCHHHHHHHHHH
Q 003371 711 ---------------------------------VEKGEVVEGVEFRN---YTDEERIQKVDKIRVMARSSPFDKLLMVQC 754 (825)
Q Consensus 711 ---------------------------------~~~~~vi~G~~~~~---~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~ 754 (825)
.....+++|++|+. +.++++.+.+++..||||++|+||.++|+.
T Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~ 796 (1054)
T TIGR01657 717 QIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVEL 796 (1054)
T ss_pred eEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHH
Confidence 01137999999876 466789999999999999999999999999
Q ss_pred HHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhcccc
Q 003371 755 LKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCF 823 (825)
Q Consensus 755 Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~ 823 (825)
||+.|++|||||||+||+||||+||||||||. +|++ .+||+++++|||++|+++|+|||++|.|++
T Consensus 797 lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~--~das-~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~ 862 (1054)
T TIGR01657 797 LQKLDYTVGMCGDGANDCGALKQADVGISLSE--AEAS-VAAPFTSKLASISCVPNVIREGRCALVTSF 862 (1054)
T ss_pred HHhCCCeEEEEeCChHHHHHHHhcCcceeecc--ccce-eecccccCCCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999984 3554 899999999999999999999999999975
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-106 Score=898.35 Aligned_cols=675 Identities=27% Similarity=0.447 Sum_probs=569.4
Q ss_pred CHHHHHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhh-hcccc---CC
Q 003371 113 GVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLG-FGIKE---HG 188 (825)
Q Consensus 113 gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~-~g~~~---~g 188 (825)
.+++|+++|.++..+||+..+ +.+++.+-|+|.+++|+..+=|..+.+++...+-++++++|+++++ +++.. +.
T Consensus 43 ~~~eL~~r~~t~~~~Glt~~~--A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~ 120 (1019)
T KOG0203|consen 43 SVDELCERYGTSVSQGLTSQE--AAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDD 120 (1019)
T ss_pred CHHHHHHHhcCChhhcccHHH--HHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCC
Confidence 799999999999999999866 9999999999999999988899999999999999999999999975 33311 11
Q ss_pred -CCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hchh--CCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeee
Q 003371 189 -AEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKL-SKIS--NNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIP 264 (825)
Q Consensus 189 -~~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l-~~~~--~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VP 264 (825)
..+..|-|.. +..+++++.+..|.|+++..+. +..+ -+..++|+|||+.+.+...||||||+|.++-||+||
T Consensus 121 ~~~~nly~gii----L~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVP 196 (1019)
T KOG0203|consen 121 PSDDNLYLGIV----LAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVP 196 (1019)
T ss_pred CCCcceEEEEE----EEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCCccc
Confidence 1222333322 2234455555666555554444 2222 356899999999999999999999999999999999
Q ss_pred ceEEEEecCcceecCCCCCCCCCeeeecCC--------CCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCC
Q 003371 265 ADGLFLDGHSLQVDESSMTGESDHVEVDST--------NNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNE 336 (825)
Q Consensus 265 aDgili~g~~l~VDES~LTGEs~pv~k~~~--------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~ 336 (825)
||.++++++.+++|+|+|||||+|.+..+. ..++-|.+|.+.+|.++++|++||.+|.+|++..+.......
T Consensus 197 ADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~~~~ 276 (1019)
T KOG0203|consen 197 ADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGLEDG 276 (1019)
T ss_pred ceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccCCCC
Confidence 999999999999999999999999988752 346789999999999999999999999999999998887889
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccc
Q 003371 337 RTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEG 416 (825)
Q Consensus 337 ~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~ 416 (825)
++|++..++++..++..+++++++++|++.++ .+. .++.++.+.+.+++..+|+|
T Consensus 277 ~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~---~gy----------------------~~l~avv~~i~iivAnvPeG 331 (1019)
T KOG0203|consen 277 KTPIAKEIEHFIHIITGVAIFLGISFFILALI---LGY----------------------EWLRAVVFLIGIIVANVPEG 331 (1019)
T ss_pred CCcchhhhhchHHHHHHHHHHHHHHHHHHHHh---hcc----------------------hhHHHhhhhheeEEecCcCC
Confidence 99999999999999988888887777765432 121 55667777889999999999
Q ss_pred hhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccccc--------cccCC
Q 003371 417 LPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQET--------YCKIA 488 (825)
Q Consensus 417 Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~--------~~~~~ 488 (825)
||..+|.+|+.-.+||++++.+||++.+.|++|+.++||+|||||||+|+|+|.++|.+......+. ....+
T Consensus 332 L~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~ 411 (1019)
T KOG0203|consen 332 LLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSS 411 (1019)
T ss_pred ccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccC
Confidence 9999999999999999999999999999999999999999999999999999999999875433211 11123
Q ss_pred hHHHHHHHHHHhhcCCccccccCCCC--CcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEE
Q 003371 489 SSIRDLFHQGVGLNTTGSVSKLKPGS--SVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLI 566 (825)
Q Consensus 489 ~~~~~~l~~~i~~n~~~~~~~~~~~~--~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv 566 (825)
+. ..-+...+.+|+.+.....+.+- .+....|++.|.||++|+. ..-.+...+|+.++.+...||||.+|..-.+.
T Consensus 412 ~~-~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e-~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih 489 (1019)
T KOG0203|consen 412 AT-FIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIE-LILGSVMELRERNPKVAEIPFNSTNKYQLSIH 489 (1019)
T ss_pred ch-HHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHH-HhcchHHHHHHhhHHhhcCCcccccceEEEEE
Confidence 33 33444556677666654321111 1335689999999999997 44445578899999999999999999997777
Q ss_pred EecC--CCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccch--
Q 003371 567 RRKA--DNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNND-- 642 (825)
Q Consensus 567 ~~~~--~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~-- 642 (825)
...+ +.++.+.+|||||.++++|+.+.- +|+..|+++..++.+.....++...|-|+++|+++.+++++ ++..
T Consensus 490 ~~~d~~~~~~~l~mKGape~il~~CSTi~i-~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~--~p~~~~ 566 (1019)
T KOG0203|consen 490 ETEDPSDPRFLLVMKGAPERILDRCSTILI-NGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEK--FPRGFQ 566 (1019)
T ss_pred ecCCCCCccceeeecCChHHHHhhccceee-cCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhc--CCCceE
Confidence 6554 234778899999999999998776 89999999999999999999999999999999999998642 2211
Q ss_pred h-HHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCccccccc----------
Q 003371 643 V-KARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQV---------- 711 (825)
Q Consensus 643 ~-~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~---------- 711 (825)
. ....+++.++|.|+|++.+-||+|+.+++||..||.|||+|+|+|||++.||+|||++.||+..+.+.
T Consensus 567 f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~ 646 (1019)
T KOG0203|consen 567 FDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNI 646 (1019)
T ss_pred eecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCC
Confidence 1 12345677899999999999999999999999999999999999999999999999999998755432
Q ss_pred ---------ccceeeechhhhcCCHHHHHhhccCee--EEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc
Q 003371 712 ---------EKGEVVEGVEFRNYTDEERIQKVDKIR--VMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADV 780 (825)
Q Consensus 712 ---------~~~~vi~G~~~~~~~~~~~~~~~~~~~--V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdV 780 (825)
....|++|.|+..++.+++++++.+.. ||||.||+||+.||+.+|++|.+|++||||+||+||||+|||
T Consensus 647 ~v~~vn~~~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADI 726 (1019)
T KOG0203|consen 647 PVEQVNSRDAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADI 726 (1019)
T ss_pred cccccCccccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhccccc
Confidence 256799999999999999999987654 999999999999999999999999999999999999999999
Q ss_pred cEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhcccc
Q 003371 781 GLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCF 823 (825)
Q Consensus 781 Giamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~ 823 (825)
|||||++|++++|+|||+|||||||+|||..|++||-+|+|+.
T Consensus 727 GVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLK 769 (1019)
T KOG0203|consen 727 GVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLK 769 (1019)
T ss_pred ceeeccccchHHHhhcceEEecCcchhheeecccceehhhhHH
Confidence 9999999999999999999999999999999999999999985
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-96 Score=855.40 Aligned_cols=531 Identities=25% Similarity=0.356 Sum_probs=440.9
Q ss_pred HHHhhhHHHHHHHHHHHHHhhhccccC------CCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeE
Q 003371 161 LEAFKDTTILILLVCAALSLGFGIKEH------GAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVE 234 (825)
Q Consensus 161 ~~~~~~~~~~il~v~a~lsl~~g~~~~------g~~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~ 234 (825)
..+|+++++++|++++++|+++++... .+..+|..++.+++.+++..+++++.+++.+++++.|.+...+..++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 357889999999999999999885421 11234555566666666777778889999999999998876666899
Q ss_pred EEeCCE-EEEEEecCcccCeEEEeCCCCeeeceEEEEecCcceecCCCCCCCCCeeeecCCC-CceeeeCceeeeceEEE
Q 003371 235 VVREAR-RLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTN-NPFLFSGSKVADGYAQM 312 (825)
Q Consensus 235 V~R~g~-~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l~VDES~LTGEs~pv~k~~~~-~~~l~sGt~v~~G~~~~ 312 (825)
|+|+|. +++|++++|+|||+|.+++||+|||||++++|.. .||||+|||||.||.|.+.. .+.+|+||.|.+|.+.+
T Consensus 108 vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~a-~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i 186 (679)
T PRK01122 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVI 186 (679)
T ss_pred EEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEccE-EEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEE
Confidence 999987 8999999999999999999999999999999975 99999999999999998532 24599999999999999
Q ss_pred EEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCch
Q 003371 313 LVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDID 392 (825)
Q Consensus 313 ~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (825)
+|+++|.+|++|++++++++.+.++||+|..++.+...+..+.+++++.++ .+.++.+.
T Consensus 187 ~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~---~~~~~~g~------------------ 245 (679)
T PRK01122 187 RITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLP---PFAAYSGG------------------ 245 (679)
T ss_pred EEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHH---HHHHHhCc------------------
Confidence 999999999999999999998889999999888876555433222211111 11122110
Q ss_pred hhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEE
Q 003371 393 DVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKF 472 (825)
Q Consensus 393 ~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~ 472 (825)
. ..+..+++++|++|||+|+.+++++...+++||+++|+++|++.++|+||++|+||||||||||+|+|+++++
T Consensus 246 ----~--~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~ 319 (679)
T PRK01122 246 ----A--LSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEF 319 (679)
T ss_pred ----h--HHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEE
Confidence 1 1467789999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EeccccccccccccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEE
Q 003371 473 WLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHV 552 (825)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~ 552 (825)
+..+.. +. .++ ...+++++.+ +.||..+||++++....+.+.. +..++..+.
T Consensus 320 ~~~~~~---------~~--~~l-l~~a~~~s~~--------------s~hP~~~AIv~~a~~~~~~~~~--~~~~~~~~~ 371 (679)
T PRK01122 320 LPVPGV---------TE--EEL-ADAAQLSSLA--------------DETPEGRSIVVLAKQRFNLRER--DLQSLHATF 371 (679)
T ss_pred EeCCCC---------CH--HHH-HHHHHHhcCC--------------CCCchHHHHHHHHHhhcCCCch--hhcccccee
Confidence 753221 11 122 2223333221 2368899999998732343322 223566788
Q ss_pred ecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeec
Q 003371 553 ETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQV 632 (825)
Q Consensus 553 ~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l 632 (825)
+||++.+|+|++.+ ++ +.++||++|.+++.|.. +|. +.++++++.+++++++|+|++++|+
T Consensus 372 ~pF~s~~~~~gv~~---~g---~~~~kGa~e~il~~~~~----~g~------~~~~~~~~~~~~~a~~G~~~l~va~--- 432 (679)
T PRK01122 372 VPFSAQTRMSGVDL---DG---REIRKGAVDAIRRYVES----NGG------HFPAELDAAVDEVARKGGTPLVVAE--- 432 (679)
T ss_pred EeecCcCceEEEEE---CC---EEEEECCHHHHHHHHHh----cCC------cChHHHHHHHHHHHhCCCcEEEEEE---
Confidence 99999999898854 23 46899999999999963 222 1235677888999999999999996
Q ss_pred CchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccc
Q 003371 633 SEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVE 712 (825)
Q Consensus 633 ~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~ 712 (825)
|++++|+++++||+|||++++|++||++||+++|+||||+.||.+||++|||.+
T Consensus 433 --------------------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~------ 486 (679)
T PRK01122 433 --------------------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD------ 486 (679)
T ss_pred --------------------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE------
Confidence 567999999999999999999999999999999999999999999999999964
Q ss_pred cceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHH
Q 003371 713 KGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVA 792 (825)
Q Consensus 713 ~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vA 792 (825)
++||++|+||+++|+.||++|++|||||||+||||||++|||||||| +||++|
T Consensus 487 --------------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvA 539 (679)
T PRK01122 487 --------------------------FLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAA 539 (679)
T ss_pred --------------------------EEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHH
Confidence 89999999999999999999999999999999999999999999999 999999
Q ss_pred HHhcCeeeccCCchHHHHHHHHhHHhh
Q 003371 793 KESSDIVILDDDFTSVATVLSPGDQLH 819 (825)
Q Consensus 793 k~aaDivlldd~f~sIv~~i~~gR~i~ 819 (825)
||+||+||+||||++|+++++|||++.
T Consensus 540 keAADiVLldd~~s~Iv~av~~GR~~~ 566 (679)
T PRK01122 540 KEAGNMVDLDSNPTKLIEVVEIGKQLL 566 (679)
T ss_pred HHhCCEEEeCCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999976
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-96 Score=853.02 Aligned_cols=531 Identities=27% Similarity=0.376 Sum_probs=430.4
Q ss_pred HHhhhHHHHHHHHHHHHHhhhccccC--CCCC-cchhhhHHHHHHHHHHHHHHHH----HHHHHHHHHHHhchhCCCeeE
Q 003371 162 EAFKDTTILILLVCAALSLGFGIKEH--GAEE-GWYEGGSIFVAVFLVIVVSAFS----NFRQARQFDKLSKISNNIKVE 234 (825)
Q Consensus 162 ~~~~~~~~~il~v~a~lsl~~g~~~~--g~~~-~~~d~~~i~~~v~lv~~v~~~~----~~~~~~~~~~l~~~~~~~~v~ 234 (825)
..|++|+.++|+++++++++++...+ +... .+++++.|++.+++.+++..+. +++.+++.+.|.+...+.+++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 45678999999999999998886422 1111 2367778888888887777777 566666777777665544565
Q ss_pred -EEeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCcceecCCCCCCCCCeeeecCC-CCceeeeCceeeeceEEE
Q 003371 235 -VVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDST-NNPFLFSGSKVADGYAQM 312 (825)
Q Consensus 235 -V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l~VDES~LTGEs~pv~k~~~-~~~~l~sGt~v~~G~~~~ 312 (825)
|.|||++++|++++|+|||+|.+++||+|||||++++|+. .||||+|||||.||.|.+. +.+.+|+||.|.+|++.+
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i 186 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEV 186 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCccCeeecCceeecceEEE
Confidence 7799999999999999999999999999999999999976 9999999999999999853 115599999999999999
Q ss_pred EEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCch
Q 003371 313 LVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDID 392 (825)
Q Consensus 313 ~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (825)
+|+++|.+|++||+.+++++...++||+|..+..+...+ .++++++++++..+.. |.
T Consensus 187 ~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l-----~ii~l~~~~~~~~~~~-----------~~------- 243 (673)
T PRK14010 187 EITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTL-----TIIFLVVILTMYPLAK-----------FL------- 243 (673)
T ss_pred EEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHh-----------hc-------
Confidence 999999999999999999988889999997776654322 2222222222111100 00
Q ss_pred hhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEE
Q 003371 393 DVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKF 472 (825)
Q Consensus 393 ~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~ 472 (825)
.+...+..+++++|++|||+||.+++++++.+++||+|+|+++|+++++|+||++|+||||||||||+|++.++++
T Consensus 244 ----~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~ 319 (673)
T PRK14010 244 ----NFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAF 319 (673)
T ss_pred ----cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEE
Confidence 1223456778888899999999999999999999999999999999999999999999999999999987777765
Q ss_pred EeccccccccccccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEE
Q 003371 473 WLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHV 552 (825)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~ 552 (825)
..... ....+++..+. +++. .+.||+++|+++++. +.+.+....+ .+.
T Consensus 320 ~~~~~-----------~~~~~ll~~a~-~~~~--------------~s~~P~~~AIv~~a~-~~~~~~~~~~-----~~~ 367 (673)
T PRK14010 320 IPVKS-----------SSFERLVKAAY-ESSI--------------ADDTPEGRSIVKLAY-KQHIDLPQEV-----GEY 367 (673)
T ss_pred EeCCC-----------ccHHHHHHHHH-HhcC--------------CCCChHHHHHHHHHH-HcCCCchhhh-----cce
Confidence 43211 01123333222 2221 134899999999987 6655433221 234
Q ss_pred ecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeec
Q 003371 553 ETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQV 632 (825)
Q Consensus 553 ~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l 632 (825)
+||++++|+|++.+. +. .+.|||++.++++|+. +|...+ ..+++.+++++++|+|+++++.
T Consensus 368 ~pF~~~~k~~gv~~~---g~---~i~kGa~~~il~~~~~----~g~~~~------~~~~~~~~~~a~~G~~~l~v~~--- 428 (673)
T PRK14010 368 IPFTAETRMSGVKFT---TR---EVYKGAPNSMVKRVKE----AGGHIP------VDLDALVKGVSKKGGTPLVVLE--- 428 (673)
T ss_pred eccccccceeEEEEC---CE---EEEECCHHHHHHHhhh----cCCCCc------hHHHHHHHHHHhCCCeEEEEEE---
Confidence 799999999998752 32 4569999999999984 222111 2356677889999999998763
Q ss_pred CchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccc
Q 003371 633 SEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVE 712 (825)
Q Consensus 633 ~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~ 712 (825)
|++++|+++++||+|||++++|++||++||+++|+||||+.||.+||+++||..
T Consensus 429 --------------------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~------ 482 (673)
T PRK14010 429 --------------------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR------ 482 (673)
T ss_pred --------------------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce------
Confidence 568999999999999999999999999999999999999999999999999964
Q ss_pred cceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHH
Q 003371 713 KGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVA 792 (825)
Q Consensus 713 ~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vA 792 (825)
++||++|+||+++|+.||++|++|||||||+||||||++|||||||| +||++|
T Consensus 483 --------------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvA 535 (673)
T PRK14010 483 --------------------------FVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSA 535 (673)
T ss_pred --------------------------EEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHH
Confidence 89999999999999999999999999999999999999999999999 999999
Q ss_pred HHhcCeeeccCCchHHHHHHHHhHHhhccccC
Q 003371 793 KESSDIVILDDDFTSVATVLSPGDQLHSGCFC 824 (825)
Q Consensus 793 k~aaDivlldd~f~sIv~~i~~gR~i~~ni~~ 824 (825)
||+||+||+||||++|++++++||++|+|+.+
T Consensus 536 keAADiVLldd~ls~Iv~av~~gR~i~~n~~~ 567 (673)
T PRK14010 536 KEAANLIDLDSNPTKLMEVVLIGKQLLMTRGS 567 (673)
T ss_pred HHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999854
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-95 Score=898.58 Aligned_cols=649 Identities=26% Similarity=0.307 Sum_probs=504.5
Q ss_pred cCCCcCCCCCCccH---HHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 003371 143 FGANTYHKPPPKGL---LHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQAR 219 (825)
Q Consensus 143 ~G~N~~~~~~~~s~---~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~ 219 (825)
|.+|.+...+-..| +..+|+||+++.++++++.+++++++.+++.+ ....+++++++++++++.++.++.
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~-------~~t~~~pL~~v~~~~~~~~~~ed~ 73 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTY-------RGTSIVPLAFVLIVTAIKEAIEDI 73 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCC-------ccHhHHhHHHHHHHHHHHHHHHHH
Confidence 56788876654333 57899999999999999999999998765433 223445666666677778887777
Q ss_pred HHHHHhchhCCCeeEEEeC-CEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCc----ceecCCCCCCCCCeeeecCC
Q 003371 220 QFDKLSKISNNIKVEVVRE-ARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHS----LQVDESSMTGESDHVEVDST 294 (825)
Q Consensus 220 ~~~~l~~~~~~~~v~V~R~-g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~----l~VDES~LTGEs~pv~k~~~ 294 (825)
+.++.++..++..++|+|+ |++++|++.||+|||||.|++||+|||||++++++. +.||||+|||||.|+.|.+.
T Consensus 74 ~r~~~d~~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~ 153 (1057)
T TIGR01652 74 RRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQAL 153 (1057)
T ss_pred HHHHhHHHHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecc
Confidence 7777777778899999997 899999999999999999999999999999998654 79999999999999988631
Q ss_pred ----------------------------------------------CCceeeeCceeee-ceEEEEEEEEcccchHHHHH
Q 003371 295 ----------------------------------------------NNPFLFSGSKVAD-GYAQMLVVSVGMNTAWGEMM 327 (825)
Q Consensus 295 ----------------------------------------------~~~~l~sGt~v~~-G~~~~~V~~vG~~T~~g~i~ 327 (825)
.++++++||.+.+ |++.++|++||.+|.+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~-- 231 (1057)
T TIGR01652 154 EETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMR-- 231 (1057)
T ss_pred hhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhh--
Confidence 1267899999998 999999999999996544
Q ss_pred hhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccC-CCCCchhhHHHHHHHHHHHH
Q 003371 328 SSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNG-SNTDIDDVFNAVVSIVAAAV 406 (825)
Q Consensus 328 ~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~av 406 (825)
+....+.++++++++++++..++..+.++++++++++.. ++..... ...|.. ...........++..|..++
T Consensus 232 -n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~--~~~~~~~----~~~~yl~~~~~~~~~~~~~~~~~~~~~ 304 (1057)
T TIGR01652 232 -NATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAG--IWNDAHG----KDLWYIRLDVSERNAAANGFFSFLTFL 304 (1057)
T ss_pred -cCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHH--heecccC----CCccceecCcccccchhHHHHHHHHHH
Confidence 555667788999999999988776666655554444321 1111100 011210 00001111223455677888
Q ss_pred HHHHHHhccchhHHHHHHHHHHH------HHHhcc----ccccccchhhhcccCeEEEEecCcCccccCceEEEEEEecc
Q 003371 407 TIVVVAIPEGLPLAVTLTLAYSM------KRMMTD----QAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQ 476 (825)
Q Consensus 407 ~ilvvavP~~Lplavtl~la~~~------~~m~k~----~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~ 476 (825)
.+++.++|++||..++++++..+ ++|.++ +++||+++++|+||++++||+|||||||+|+|+++++++++
T Consensus 305 ~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g 384 (1057)
T TIGR01652 305 ILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAG 384 (1057)
T ss_pred HHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECC
Confidence 99999999999999999999998 788875 49999999999999999999999999999999999999887
Q ss_pred cccccccc----------c-----------c--------------------CChHHHHHHHHHHhhcCCccccccCCCCC
Q 003371 477 ESIVQETY----------C-----------K--------------------IASSIRDLFHQGVGLNTTGSVSKLKPGSS 515 (825)
Q Consensus 477 ~~~~~~~~----------~-----------~--------------------~~~~~~~~l~~~i~~n~~~~~~~~~~~~~ 515 (825)
..+..... . . ..+...+ +..++++|++.......++.+
T Consensus 385 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~l~lC~~v~~~~~~~~~~ 463 (1057)
T TIGR01652 385 VSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINE-FFLALALCHTVVPEFNDDGPE 463 (1057)
T ss_pred EEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHH-HHHHHHhcCcccccccCCCCC
Confidence 65432100 0 0 0011222 334566676655432101111
Q ss_pred -cceecCChhHHHHHHHHHHHcCCchHH--------------HhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcC
Q 003371 516 -VAEFSGSPTEKAVLSWAVLEMGMEMDK--------------VKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKG 580 (825)
Q Consensus 516 -~~~~~g~p~e~All~~a~~~~g~~~~~--------------~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KG 580 (825)
..+..|||+|.||+++|. .+|+.+.. ....|++++++||+|+||||||+++.+++ ++.+|+||
T Consensus 464 ~~~y~~~sp~E~ALl~~a~-~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~-~~~l~~KG 541 (1057)
T TIGR01652 464 EITYQAASPDEAALVKAAR-DVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDG-RIKLLCKG 541 (1057)
T ss_pred ceEEEccCCcHHHHHHHHH-HCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCC-eEEEEEeC
Confidence 224469999999999998 88876531 22468999999999999999999988665 48899999
Q ss_pred cHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccc---------------hhHH
Q 003371 581 AAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNN---------------DVKA 645 (825)
Q Consensus 581 a~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~---------------~~~~ 645 (825)
|||.|+++|++. +++.++.+++.+++|+.+|+||+++|||++++++..... ....
T Consensus 542 A~e~il~~~~~~----------~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~ 611 (1057)
T TIGR01652 542 ADTVIFKRLSSG----------GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDV 611 (1057)
T ss_pred cHHHHHHHhhcc----------chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 999999999741 234577889999999999999999999999875421100 0011
Q ss_pred hhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCccccccc--------------
Q 003371 646 RQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQV-------------- 711 (825)
Q Consensus 646 ~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~-------------- 711 (825)
..+..|+||+|+|+++++||+||||+++|+.|++|||+|||+|||+++||.+||++|||++.+...
T Consensus 612 ~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~ 691 (1057)
T TIGR01652 612 VAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSV 691 (1057)
T ss_pred HHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHH
Confidence 124568999999999999999999999999999999999999999999999999999999764320
Q ss_pred ----------------------ccceeeechhhhcCCHHH----HHhhccCe--eEEEecCHHHHHHHHHHHHhC-CCEE
Q 003371 712 ----------------------EKGEVVEGVEFRNYTDEE----RIQKVDKI--RVMARSSPFDKLLMVQCLKKK-GHVV 762 (825)
Q Consensus 712 ----------------------~~~~vi~G~~~~~~~~~~----~~~~~~~~--~V~ar~sP~dK~~lV~~Lq~~-g~vV 762 (825)
...++++|+++..+.+++ +.+.+.+. .|+||++|+||.++|+.+|+. |++|
T Consensus 692 ~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~v 771 (1057)
T TIGR01652 692 EAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTT 771 (1057)
T ss_pred HHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeE
Confidence 123689999998665543 44555554 499999999999999999998 9999
Q ss_pred EEEcCCccCHHHhhhCCccEecCCCchH--HHHHhcCeeeccCCchHHHHHH-HHhHHhhccccC
Q 003371 763 AVTGDGTNDAPALKEADVGLSMGIQGTE--VAKESSDIVILDDDFTSVATVL-SPGDQLHSGCFC 824 (825)
Q Consensus 763 a~~GDG~NDapALk~AdVGiamg~~gt~--vAk~aaDivlldd~f~sIv~~i-~~gR~i~~ni~~ 824 (825)
+|||||+||+|||++|||||+ +.|+| .|+++||++|. +|+.|.+++ .+||++|+|+..
T Consensus 772 l~iGDG~ND~~mlk~AdVGIg--i~g~eg~qA~~aaD~~i~--~F~~L~~lll~~GR~~~~r~~~ 832 (1057)
T TIGR01652 772 LAIGDGANDVSMIQEADVGVG--ISGKEGMQAVMASDFAIG--QFRFLTKLLLVHGRWSYKRISK 832 (1057)
T ss_pred EEEeCCCccHHHHhhcCeeeE--ecChHHHHHHHhhhhhhh--hHHHHHHHHHhhCHHHHHHHHH
Confidence 999999999999999999995 46777 69999999998 499999998 779999999843
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-92 Score=815.50 Aligned_cols=534 Identities=26% Similarity=0.372 Sum_probs=439.3
Q ss_pred HHHhhhHHHHHHHHHHHHHhhhcccc--C---CCCCcchhh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCe
Q 003371 161 LEAFKDTTILILLVCAALSLGFGIKE--H---GAEEGWYEG---GSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIK 232 (825)
Q Consensus 161 ~~~~~~~~~~il~v~a~lsl~~g~~~--~---g~~~~~~d~---~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~ 232 (825)
..+|+|+++++|++++++|+++++.+ . +...+||++ +.+++.+++..+++++.+++.++++++|.+...+..
T Consensus 27 ~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~ 106 (675)
T TIGR01497 27 KAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTF 106 (675)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 34789999999999999999987632 1 222358875 445566777778888999999999999988766667
Q ss_pred eEEEe-CCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCcceecCCCCCCCCCeeeecCCCC-ceeeeCceeeeceE
Q 003371 233 VEVVR-EARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNN-PFLFSGSKVADGYA 310 (825)
Q Consensus 233 v~V~R-~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l~VDES~LTGEs~pv~k~~~~~-~~l~sGt~v~~G~~ 310 (825)
++|+| ||++++|++++|+|||+|.+++||+|||||++++|+ +.||||+|||||.||.|.+... +.+|+||.|.+|++
T Consensus 107 a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~ 185 (675)
T TIGR01497 107 AKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-ASVDESAITGESAPVIKESGGDFASVTGGTRILSDWL 185 (675)
T ss_pred EEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-EEEEcccccCCCCceeecCCCCcceeecCcEEEeeEE
Confidence 88886 899999999999999999999999999999999996 5999999999999999985432 24999999999999
Q ss_pred EEEEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCC
Q 003371 311 QMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTD 390 (825)
Q Consensus 311 ~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (825)
.++|+++|.+|++|++++++++.+.++||+|..++.+...+..+.++ ++++++....+.+
T Consensus 186 ~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li---~~~~~~~~~~~~~----------------- 245 (675)
T TIGR01497 186 VVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLL---VTATLWPFAAYGG----------------- 245 (675)
T ss_pred EEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHH---HHHHHHHHHHhcC-----------------
Confidence 99999999999999999999988888999998888776544322221 1122221111100
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEE
Q 003371 391 IDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVT 470 (825)
Q Consensus 391 ~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~ 470 (825)
. ...+..+++++|++|||+|+...+.....+++||+++|+++|++.+||+||++|+||||||||||+|+|+++
T Consensus 246 ------~-~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~ 318 (675)
T TIGR01497 246 ------N-AISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLAS 318 (675)
T ss_pred ------h-hHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEE
Confidence 0 113566788999999998887777777789999999999999999999999999999999999999999999
Q ss_pred EEEeccccccccccccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEE
Q 003371 471 KFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSIL 550 (825)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~ 550 (825)
+++..+.. + ..+++ ..+++++. .+.||.++|+++++. +.|.+.... .++..
T Consensus 319 ~~~~~~~~---------~--~~~ll-~~aa~~~~--------------~s~hP~a~Aiv~~a~-~~~~~~~~~--~~~~~ 369 (675)
T TIGR01497 319 EFIPAQGV---------D--EKTLA-DAAQLASL--------------ADDTPEGKSIVILAK-QLGIREDDV--QSLHA 369 (675)
T ss_pred EEEecCCC---------c--HHHHH-HHHHHhcC--------------CCCCcHHHHHHHHHH-HcCCCcccc--ccccc
Confidence 98753211 1 11222 22323321 135799999999997 666544321 23456
Q ss_pred EEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEe
Q 003371 551 HVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYK 630 (825)
Q Consensus 551 ~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k 630 (825)
+..||++.+|+|++.+. ++ +.++||++|.+++.|.. +|.. .+..+++.+++++++|+|++++|+
T Consensus 370 ~~~pf~~~~~~sg~~~~--~g---~~~~kGa~e~i~~~~~~----~g~~------~~~~~~~~~~~~a~~G~r~l~va~- 433 (675)
T TIGR01497 370 TFVEFTAQTRMSGINLD--NG---RMIRKGAVDAIKRHVEA----NGGH------IPTDLDQAVDQVARQGGTPLVVCE- 433 (675)
T ss_pred eEEEEcCCCcEEEEEEe--CC---eEEEECCHHHHHHHHHh----cCCC------CcHHHHHHHHHHHhCCCeEEEEEE-
Confidence 78999999888877543 23 46899999999998852 2221 224577788999999999999997
Q ss_pred ecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccc
Q 003371 631 QVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQ 710 (825)
Q Consensus 631 ~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~ 710 (825)
+.+++|+++++||+|||++++|++||++||+++|+||||..||.++|+++||..
T Consensus 434 ----------------------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~---- 487 (675)
T TIGR01497 434 ----------------------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD---- 487 (675)
T ss_pred ----------------------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE----
Confidence 347999999999999999999999999999999999999999999999999964
Q ss_pred cccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchH
Q 003371 711 VEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTE 790 (825)
Q Consensus 711 ~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~ 790 (825)
++||++|+||..+|+.+|++|+.|+|+|||+||+|||++|||||||| +|++
T Consensus 488 ----------------------------v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~ 538 (675)
T TIGR01497 488 ----------------------------FIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQ 538 (675)
T ss_pred ----------------------------EEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCH
Confidence 89999999999999999999999999999999999999999999999 8999
Q ss_pred HHHHhcCeeeccCCchHHHHHHHHhHHhhccc
Q 003371 791 VAKESSDIVILDDDFTSVATVLSPGDQLHSGC 822 (825)
Q Consensus 791 vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni 822 (825)
+||++||+|++||||++|+++++|||+++-+.
T Consensus 539 ~akeaadivLldd~~s~Iv~av~~GR~~~~t~ 570 (675)
T TIGR01497 539 AAKEAANMVDLDSDPTKLIEVVHIGKQLLITR 570 (675)
T ss_pred HHHHhCCEEECCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998653
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-88 Score=832.60 Aligned_cols=653 Identities=21% Similarity=0.285 Sum_probs=502.3
Q ss_pred hcCCCcCCCCCCccHHH----HHHHHhhhHHHHHHHHHHHHHhhhccccCCCCCcchhhhHHHHHHHHHHHHHHHHHHHH
Q 003371 142 LFGANTYHKPPPKGLLH----FVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQ 217 (825)
Q Consensus 142 ~~G~N~~~~~~~~s~~~----~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~~~d~~~i~~~v~lv~~v~~~~~~~~ 217 (825)
.|..|.+...+ .++|. .+|+||+.+.++++++.++++++..++..+ ..+.+++++++++++++.++.+
T Consensus 86 ~f~~N~i~TsK-Yt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~-------~~t~~~PL~~vl~v~~ike~~E 157 (1178)
T PLN03190 86 EFAGNSIRTAK-YSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFG-------RGASILPLAFVLLVTAVKDAYE 157 (1178)
T ss_pred cCCCCeeeccc-cccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCC-------cchHHHHHHHHHHHHHHHHHHH
Confidence 58889988664 34444 488999999999999999999988765432 2345677888888888888888
Q ss_pred HHHHHHHhchhCCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCc----ceecCCCCCCCCCeeeecC
Q 003371 218 ARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHS----LQVDESSMTGESDHVEVDS 293 (825)
Q Consensus 218 ~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~----l~VDES~LTGEs~pv~k~~ 293 (825)
+.+.++.++..|+..++|+|+|.+++++|.||+|||+|.|++||+|||||++++++. +.||||+|||||.|+.|.+
T Consensus 158 d~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~ 237 (1178)
T PLN03190 158 DWRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYA 237 (1178)
T ss_pred HHHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecc
Confidence 888888887788899999999999999999999999999999999999999998433 5999999999999998863
Q ss_pred C-------------------------------------------CCceeeeCceeee-ceEEEEEEEEcccchHHHHHhh
Q 003371 294 T-------------------------------------------NNPFLFSGSKVAD-GYAQMLVVSVGMNTAWGEMMSS 329 (825)
Q Consensus 294 ~-------------------------------------------~~~~l~sGt~v~~-G~~~~~V~~vG~~T~~g~i~~~ 329 (825)
. .+++++.||.+.. .++.++|++||.+| |++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dT---K~~~N 314 (1178)
T PLN03190 238 KQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRET---KAMLN 314 (1178)
T ss_pred cchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhh---hHhhc
Confidence 1 1245666666665 37999999999999 56767
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCC---------CCchhhHHHHHH
Q 003371 330 ISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSN---------TDIDDVFNAVVS 400 (825)
Q Consensus 330 ~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~ 400 (825)
......+.+++++++|++..++..+.+++++++.++.. ++.....+......|.... ..........+.
T Consensus 315 ~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~--~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (1178)
T PLN03190 315 NSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAA--VWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFF 392 (1178)
T ss_pred CCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHH--hhhccccccccccccccccccccccccccccchhhHHHHH
Confidence 66677889999999999987776666555554444321 1111111111111121100 000000001122
Q ss_pred HHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhccc----------cccccchhhhcccCeEEEEecCcCccccCceEEE
Q 003371 401 IVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQ----------AMVRKLPACETMGSATVICTDKTGTLTLNQMKVT 470 (825)
Q Consensus 401 ~~~~av~ilvvavP~~Lplavtl~la~~~~~m~k~~----------~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~ 470 (825)
.|..++.++...||++|+..++++....+..|.+|. +.||+.+..|+||++++||+|||||||+|+|+++
T Consensus 393 ~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk 472 (1178)
T PLN03190 393 TFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQ 472 (1178)
T ss_pred HHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEE
Confidence 334445566689999999999999988788888776 6799999999999999999999999999999999
Q ss_pred EEEeccccccccc---------------------ccc--C------------C-h--HHHHHHHHHHhhcCCccccccCC
Q 003371 471 KFWLGQESIVQET---------------------YCK--I------------A-S--SIRDLFHQGVGLNTTGSVSKLKP 512 (825)
Q Consensus 471 ~~~~~~~~~~~~~---------------------~~~--~------------~-~--~~~~~l~~~i~~n~~~~~~~~~~ 512 (825)
++++++..|..+. ... . . + ....-+..++++|++.......+
T Consensus 473 ~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~ 552 (1178)
T PLN03190 473 CASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDD 552 (1178)
T ss_pred EEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCC
Confidence 9999765543110 000 0 0 0 01122344667777765431101
Q ss_pred C-C---Ccc-eecCChhHHHHHHHHHHHcCC------------chHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEE
Q 003371 513 G-S---SVA-EFSGSPTEKAVLSWAVLEMGM------------EMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTH 575 (825)
Q Consensus 513 ~-~---~~~-~~~g~p~e~All~~a~~~~g~------------~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~ 575 (825)
. + ... +..+||+|.||+.+|. ++|+ +....+..|++++++||+|+||||||+++.+++. +.
T Consensus 553 ~~~~~~~~~~Y~a~SPdE~ALv~~a~-~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~-~~ 630 (1178)
T PLN03190 553 TSDPTVKLMDYQGESPDEQALVYAAA-AYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKT-VK 630 (1178)
T ss_pred CCCccccceEEecCCCcHHHHHHHHH-HCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCc-EE
Confidence 1 1 112 3445999999999998 8887 4445677899999999999999999999876554 88
Q ss_pred EEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccc-h------------
Q 003371 576 IHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNN-D------------ 642 (825)
Q Consensus 576 ~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~-~------------ 642 (825)
+|+|||+|.|+++|++..+ ++.++.+++.+++||++|+|||++|||++++++..... .
T Consensus 631 l~~KGA~e~il~~~~~~~~---------~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~ 701 (1178)
T PLN03190 631 VFVKGADTSMFSVIDRSLN---------MNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRA 701 (1178)
T ss_pred EEEecCcHHHHHhhccccc---------chhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhH
Confidence 9999999999999985432 34567788999999999999999999999764322100 0
Q ss_pred --hHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCccccccc---------
Q 003371 643 --VKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQV--------- 711 (825)
Q Consensus 643 --~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~--------- 711 (825)
.....+..|+||+++|+++++||+|++++++|+.|++|||+|||+|||+..||.+||++|||++++...
T Consensus 702 ~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~ 781 (1178)
T PLN03190 702 ALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKE 781 (1178)
T ss_pred HHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchh
Confidence 011124568999999999999999999999999999999999999999999999999999998764210
Q ss_pred -----------------------------------ccceeeechhhhcCCH----HHHHhhccCee--EEEecCHHHHHH
Q 003371 712 -----------------------------------EKGEVVEGVEFRNYTD----EERIQKVDKIR--VMARSSPFDKLL 750 (825)
Q Consensus 712 -----------------------------------~~~~vi~G~~~~~~~~----~~~~~~~~~~~--V~ar~sP~dK~~ 750 (825)
...++++|..+..+.+ +++.+...++. |+||++|.||++
T Consensus 782 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~ 861 (1178)
T PLN03190 782 SCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAG 861 (1178)
T ss_pred hHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHH
Confidence 1237899999998875 45666665554 799999999999
Q ss_pred HHHHHHhC-CCEEEEEcCCccCHHHhhhCCccEecCCCchH--HHHHhcCeeeccCCchHHHHHH-HHhHHhhccc
Q 003371 751 MVQCLKKK-GHVVAVTGDGTNDAPALKEADVGLSMGIQGTE--VAKESSDIVILDDDFTSVATVL-SPGDQLHSGC 822 (825)
Q Consensus 751 lV~~Lq~~-g~vVa~~GDG~NDapALk~AdVGiamg~~gt~--vAk~aaDivlldd~f~sIv~~i-~~gR~i~~ni 822 (825)
+|+.+|+. +++|+|+|||+||+|||++||||| |++|+| .|+.+||+.|. .|..+.+++ -+||+.|.|+
T Consensus 862 IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGI--GIsG~EG~qA~~aSDfaI~--~Fr~L~rLLlvHGr~~y~R~ 933 (1178)
T PLN03190 862 IVALVKNRTSDMTLAIGDGANDVSMIQMADVGV--GISGQEGRQAVMASDFAMG--QFRFLVPLLLVHGHWNYQRM 933 (1178)
T ss_pred HHHHHHhcCCcEEEEECCCcchHHHHHhcCeee--eecCchhHHHHHhhccchh--hhHHHHHHHHHhCHHHHHHH
Confidence 99999997 689999999999999999999999 778999 89999999999 899999997 5899999986
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-87 Score=756.59 Aligned_cols=633 Identities=22% Similarity=0.328 Sum_probs=493.7
Q ss_pred CCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCCCcchhhhHHHHHHHH
Q 003371 126 EYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFL 205 (825)
Q Consensus 126 ~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~~~d~~~i~~~v~l 205 (825)
..||+..+ +.+|+..||+|.+..+ .++.+.++.+..-+|+.++..++.++++.-. ++|.+..|++.-+.
T Consensus 158 ~~gL~~~~--~~~r~~iyG~N~i~l~-ik~i~~iLv~EvL~PfYlFQ~fSv~lW~~d~--------Y~~YA~cI~iisv~ 226 (1140)
T KOG0208|consen 158 SNGLERQE--IIDRRIIYGRNVISLP-IKSISQILVKEVLNPFYLFQAFSVALWLADS--------YYYYAFCIVIISVY 226 (1140)
T ss_pred cCCccHHH--HHhHHhhcCCceeeee-cccHHHHHHHhccchHHHHHhHHhhhhhccc--------chhhhhHHHHHHHH
Confidence 56887754 9999999999999876 5799999999999999999988877776543 34455566555555
Q ss_pred HHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEEEEEEecCcccCeEEEeCC-CCeeeceEEEEecCcceecCCCCCC
Q 003371 206 VIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKI-GDQIPADGLFLDGHSLQVDESSMTG 284 (825)
Q Consensus 206 v~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~-Gd~VPaDgili~g~~l~VDES~LTG 284 (825)
.++++.+....|++..+++-+ ....|+|+|+|.+++|.+.|||||||+.+.+ |-..|||+++++|++ .||||+|||
T Consensus 227 Si~~sv~e~r~qs~rlr~mv~--~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~c-ivNEsmLTG 303 (1140)
T KOG0208|consen 227 SIVLSVYETRKQSIRLRSMVK--FTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGDC-IVNESMLTG 303 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHhc--CCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCcE-EeecccccC
Confidence 555555555555555555543 2468999999999999999999999999988 999999999999987 899999999
Q ss_pred CCCeeeecCC-----------------CCceeeeCceeee------ceEEEEEEEEcccchHHHHHhhccCCCCCCChhH
Q 003371 285 ESDHVEVDST-----------------NNPFLFSGSKVAD------GYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQ 341 (825)
Q Consensus 285 Es~pv~k~~~-----------------~~~~l~sGt~v~~------G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq 341 (825)
||.||.|.+. ..+++|+||++++ |.+.+.|++||.+|..|++.+++..++.. +++
T Consensus 304 ESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~--~fk 381 (1140)
T KOG0208|consen 304 ESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPV--NFK 381 (1140)
T ss_pred CcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCc--ccH
Confidence 9999999863 3468999999986 67899999999999999999999876543 333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHH
Q 003371 342 ARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAV 421 (825)
Q Consensus 342 ~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplav 421 (825)
-..|.+ .+.....++|++.|+...+.+.... . .+-.+++.++-++.+.+|++||.++
T Consensus 382 fyrds~--~fi~~l~~ia~~gfiy~~i~l~~~g------~---------------~~~~iiirsLDliTi~VPPALPAal 438 (1140)
T KOG0208|consen 382 FYRDSF--KFILFLVIIALIGFIYTAIVLNLLG------V---------------PLKTIIIRSLDLITIVVPPALPAAL 438 (1140)
T ss_pred HHHHHH--HHHHHHHHHHHHHHHHHhHhHHHcC------C---------------CHHHHhhhhhcEEEEecCCCchhhh
Confidence 333322 2333333444444544433332211 0 4556788899999999999999999
Q ss_pred HHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEecccccccc--------cc----ccC--
Q 003371 422 TLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQE--------TY----CKI-- 487 (825)
Q Consensus 422 tl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~--------~~----~~~-- 487 (825)
++...++.+||.|+|++|-++..+...|+++++|||||||||++.+.+-.+..-....+.. .. ..+
T Consensus 439 tvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 518 (1140)
T KOG0208|consen 439 TVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSL 518 (1140)
T ss_pred hHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccc
Confidence 9999999999999999999999999999999999999999999999998877532211100 00 000
Q ss_pred Ch--HHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHc------CCc-------------h-----H
Q 003371 488 AS--SIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEM------GME-------------M-----D 541 (825)
Q Consensus 488 ~~--~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~------g~~-------------~-----~ 541 (825)
.. .....+..+++.|+ ++... ..+..|+|.|.-+.+...+.+ +.. + +
T Consensus 519 ~~~~~~~~~~~~a~atCH--SL~~v-----~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~ 591 (1140)
T KOG0208|consen 519 RSSSLPMGNLVAAMATCH--SLTLV-----DGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFN 591 (1140)
T ss_pred cccCCchHHHHHHHhhhc--eeEEe-----CCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCccccc
Confidence 00 01223444555555 33221 124577787776665432211 000 0 0
Q ss_pred HHh----hcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHH
Q 003371 542 KVK----QKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGM 617 (825)
Q Consensus 542 ~~~----~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~ 617 (825)
... +.+.+++.+||+|..+||||++..++.++..+|+|||||.|.+.|.+ +..+..+++.++.|
T Consensus 592 ~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p------------~tvP~dy~evl~~Y 659 (1140)
T KOG0208|consen 592 QSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKP------------ETVPADYQEVLKEY 659 (1140)
T ss_pred CCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCc------------ccCCccHHHHHHHH
Confidence 000 14789999999999999999999987788999999999999999984 23456789999999
Q ss_pred hhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHH
Q 003371 618 AASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKA 697 (825)
Q Consensus 618 a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~a 697 (825)
+.+|+|+||+|+|+++.. .........++..|.||+|+|++.+++++|++++.+|+.|++|.|+++|+||||..||..
T Consensus 660 t~~GfRVIAlA~K~L~~~--~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTais 737 (1140)
T KOG0208|consen 660 THQGFRVIALASKELETS--TLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAIS 737 (1140)
T ss_pred HhCCeEEEEEecCccCcc--hHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeee
Confidence 999999999999999762 111122245778899999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCccccccc--------------------------------------------------ccceeeechhhhcCC-
Q 003371 698 IATECGILRLDQQV--------------------------------------------------EKGEVVEGVEFRNYT- 726 (825)
Q Consensus 698 IA~~~GI~~~~~~~--------------------------------------------------~~~~vi~G~~~~~~~- 726 (825)
+||+||++.+.... ....+++|+.|+-+.
T Consensus 738 VakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~ 817 (1140)
T KOG0208|consen 738 VAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILE 817 (1140)
T ss_pred hhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHh
Confidence 99999999754320 245789999988664
Q ss_pred --HHHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCC
Q 003371 727 --DEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDD 804 (825)
Q Consensus 727 --~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~ 804 (825)
.+.+..++.+..|||||+|.||.++|+.||+.|+.|+|+|||.||+.|||+||||||++.+... -||.+.---.+
T Consensus 818 ~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSeaEAS---vAApFTSk~~~ 894 (1140)
T KOG0208|consen 818 HFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSEAEAS---VAAPFTSKTPS 894 (1140)
T ss_pred hcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhhhhHh---hcCccccCCCc
Confidence 4667778889999999999999999999999999999999999999999999999999855444 45888877789
Q ss_pred chHHHHHHHHhHHhhcc
Q 003371 805 FTSVATVLSPGDQLHSG 821 (825)
Q Consensus 805 f~sIv~~i~~gR~i~~n 821 (825)
.+.++++|++||+....
T Consensus 895 I~cVp~vIrEGRaALVT 911 (1140)
T KOG0208|consen 895 ISCVPDVIREGRAALVT 911 (1140)
T ss_pred hhhHhHHHhhhhhhhhh
Confidence 99999999999997654
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-86 Score=716.51 Aligned_cols=624 Identities=25% Similarity=0.375 Sum_probs=499.7
Q ss_pred hCCHHHHHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCC
Q 003371 111 LGGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAE 190 (825)
Q Consensus 111 ~ggv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~ 190 (825)
-|-++.+-..|.+..+ ||+++| +.+|++.||.|++.+++...|++| +.-|-+|.-++.-.+|++..++. ...|.+
T Consensus 20 ~~p~eeVfeeL~~t~~-GLt~~E--~~eRlk~fG~NkleEkken~~lKF-l~Fm~~PlswVMEaAAimA~~La-ng~~~~ 94 (942)
T KOG0205|consen 20 AIPIEEVFEELLCTRE-GLTSDE--VEERLKIFGPNKLEEKKESKFLKF-LGFMWNPLSWVMEAAAIMAIGLA-NGGGRP 94 (942)
T ss_pred cCchhhhHHHHhcCCC-CCchHH--HHHHHHhhCchhhhhhhhhHHHHH-HHHHhchHHHHHHHHHHHHHHHh-cCCCCC
Confidence 3467888887777644 999977 999999999999998876655554 33334456677777777765553 224556
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEE
Q 003371 191 EGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFL 270 (825)
Q Consensus 191 ~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili 270 (825)
..|.|.+.|...+++...++.+.+|+.......|.+- -..+.+|+|||+|.++...+||||||+.++.||+|||||+++
T Consensus 95 ~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~-LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl 173 (942)
T KOG0205|consen 95 PDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAG-LAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARLL 173 (942)
T ss_pred cchhhhhhhheeeeecceeeeeeccccchHHHHHHhc-cCcccEEeecCeeeeeeccccccCceeeeccCCEecCcccee
Confidence 6899999998888888888889999888887777543 246788999999999999999999999999999999999999
Q ss_pred ecCcceecCCCCCCCCCeeeecCCCCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHHHH
Q 003371 271 DGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTST 350 (825)
Q Consensus 271 ~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~ 350 (825)
+|+-|+||+|+|||||.||.|. +++.+||||.|.+|.+.|+|++||.+|..||...++.. .+..-.+|+-|+.+.++
T Consensus 174 ~gD~LkiDQSAlTGESLpvtKh--~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkVLt~IGn~ 250 (942)
T KOG0205|consen 174 EGDPLKIDQSALTGESLPVTKH--PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTGIGNF 250 (942)
T ss_pred cCCccccchhhhcCCccccccC--CCCceecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHHHHhhhhH
Confidence 9999999999999999999998 68889999999999999999999999999999999876 66678889988887765
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHH-HhccchhHHHHHHHHHHH
Q 003371 351 IGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVV-AIPEGLPLAVTLTLAYSM 429 (825)
Q Consensus 351 i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvv-avP~~Lplavtl~la~~~ 429 (825)
.... +++-+++.+.+.|...+ ...+....-+.++++ .+|.|||..++.++|.+.
T Consensus 251 ci~s---i~~g~lie~~vmy~~q~----------------------R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs 305 (942)
T KOG0205|consen 251 CICS---IALGMLIEITVMYPIQH----------------------RLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 305 (942)
T ss_pred HHHH---HHHHHHHHHHhhhhhhh----------------------hhhhhhhhheheeeecccccccceeeeehhhHHH
Confidence 5322 12222222233333321 111222223334444 499999999999999999
Q ss_pred HHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEE--E--EeccccccccccccCChHHHHHHHHHHhhcCCc
Q 003371 430 KRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTK--F--WLGQESIVQETYCKIASSIRDLFHQGVGLNTTG 505 (825)
Q Consensus 430 ~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~--~--~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~ 505 (825)
.+|.++|+++++++|+|.|+.++++|+|||||||.|+++|.+ + +..+ ++++..-++ .+..+
T Consensus 306 ~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~g----------v~~D~~~L~---A~rAs-- 370 (942)
T KOG0205|consen 306 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKG----------VDKDDVLLT---AARAS-- 370 (942)
T ss_pred HHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecC----------CChHHHHHH---HHHHh--
Confidence 999999999999999999999999999999999999999987 3 3222 122222111 11111
Q ss_pred cccccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHH
Q 003371 506 SVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEII 585 (825)
Q Consensus 506 ~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~i 585 (825)
..+ --+..+.|++.... |+.+.+..++.++..|||+..||-+..+..++|+ .+..+|||||.|
T Consensus 371 r~e-----------n~DAID~A~v~~L~-----dPKeara~ikevhF~PFnPV~Krta~ty~d~dG~-~~r~sKGAPeqi 433 (942)
T KOG0205|consen 371 RKE-----------NQDAIDAAIVGMLA-----DPKEARAGIKEVHFLPFNPVDKRTALTYIDPDGN-WHRVSKGAPEQI 433 (942)
T ss_pred hhc-----------ChhhHHHHHHHhhc-----CHHHHhhCceEEeeccCCccccceEEEEECCCCC-EEEecCCChHHH
Confidence 111 12578889887443 3678889999999999999999999999888887 677899999999
Q ss_pred HHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCC
Q 003371 586 LAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDP 665 (825)
Q Consensus 586 l~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~Dp 665 (825)
++.|.. +.+.++.+.+.+++||++|+|.+++|++..++.. .+.......|+|+.-+-||
T Consensus 434 l~l~~~-----------~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~----------~~~~g~pw~~~gllp~fdp 492 (942)
T KOG0205|consen 434 LKLCNE-----------DHDIPERVHSIIDKFAERGLRSLAVARQEVPEKT----------KESPGGPWEFVGLLPLFDP 492 (942)
T ss_pred HHHhhc-----------cCcchHHHHHHHHHHHHhcchhhhhhhhcccccc----------ccCCCCCcccccccccCCC
Confidence 999973 3467888999999999999999999999886622 2234456789999999999
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhh-hcCCHHHHHhhccCeeEEEecC
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEF-RNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~-~~~~~~~~~~~~~~~~V~ar~s 744 (825)
+|.+..++|+.....|++|.|+|||....++..++++|.-+.-.. +..+-|..- .++...+..+.+.+..=||.+.
T Consensus 493 prhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmyp---ss~llG~~~~~~~~~~~v~elie~adgfAgVf 569 (942)
T KOG0205|consen 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP---SSALLGLGKDGSMPGSPVDELIEKADGFAGVF 569 (942)
T ss_pred CccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCC---chhhccCCCCCCCCCCcHHHHhhhccCccccC
Confidence 999999999999999999999999999999999999998653211 111111111 1122223444555556799999
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhccccC
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCFC 824 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~~ 824 (825)
|+||+.+|+.||++||.|+|||||+||+||||+||+|||+. .+|+.|+.+|||||+...++.|+.++..+|.+|+++.+
T Consensus 570 pehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfqrmkn 648 (942)
T KOG0205|consen 570 PEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKN 648 (942)
T ss_pred HHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999998 89999999999999999999999999999999999987
Q ss_pred C
Q 003371 825 W 825 (825)
Q Consensus 825 ~ 825 (825)
|
T Consensus 649 y 649 (942)
T KOG0205|consen 649 Y 649 (942)
T ss_pred h
Confidence 6
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-80 Score=717.49 Aligned_cols=526 Identities=27% Similarity=0.389 Sum_probs=417.0
Q ss_pred CccHHHHHHHHhhhHH-HH--HHHHHHHHHhhhccccCCCCCcchhhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHhchh
Q 003371 153 PKGLLHFVLEAFKDTT-IL--ILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLV-IVVSAFSNFRQARQFDKLSKIS 228 (825)
Q Consensus 153 ~~s~~~~~~~~~~~~~-~~--il~v~a~lsl~~g~~~~g~~~~~~d~~~i~~~v~lv-~~v~~~~~~~~~~~~~~l~~~~ 228 (825)
..+|++-.|+.++... .+ +..++++.+++++....-.. .||+..++++.++++ -.++....-+..+..++|.++
T Consensus 131 g~~f~~~a~~~l~~~~~~md~Lv~la~~~A~~~s~~~~~~~-~yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l- 208 (713)
T COG2217 131 GWPFYRGAWRALRRGRLNMDTLVALATIGAYAYSLYATLFP-VYFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDL- 208 (713)
T ss_pred hHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-
Confidence 4566667777777642 22 22223333344443211011 456655544443332 233333333444445555544
Q ss_pred CCCeeEEEe-CCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCcceecCCCCCCCCCeeeecCCCCceeeeCceeee
Q 003371 229 NNIKVEVVR-EARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVAD 307 (825)
Q Consensus 229 ~~~~v~V~R-~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~ 307 (825)
.+..+++++ ||+.++|++++|+|||+|.++|||+||+||++++|++ .||||+|||||.||.|. .++.+++||.+.+
T Consensus 209 ~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~s-~vDeS~iTGEs~PV~k~--~Gd~V~aGtiN~~ 285 (713)
T COG2217 209 APKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSS-SVDESMLTGESLPVEKK--PGDEVFAGTVNLD 285 (713)
T ss_pred CCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCcE-EeecchhhCCCCCEecC--CCCEEeeeEEECC
Confidence 355676666 5669999999999999999999999999999999999 99999999999999998 6889999999999
Q ss_pred ceEEEEEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCC
Q 003371 308 GYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGS 387 (825)
Q Consensus 308 G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~ 387 (825)
|..++.|+++|.+|.+++|++++++++..++|.|+..|+++.++.++++++++++|++|. +.+. .
T Consensus 286 G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~---~~~~-------~----- 350 (713)
T COG2217 286 GSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWP---LFGG-------G----- 350 (713)
T ss_pred ccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHH---HhcC-------C-----
Confidence 999999999999999999999999999999999999999999999999999999998653 2221 0
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCce
Q 003371 388 NTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQM 467 (825)
Q Consensus 388 ~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m 467 (825)
.+...|..++++++++|||+|.+++|+++..++.+.++.|+|+|+..++|+++++++|+||||||||+|+|
T Consensus 351 ---------~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p 421 (713)
T COG2217 351 ---------DWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKP 421 (713)
T ss_pred ---------cHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCce
Confidence 34457889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeccccccccccccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCC-chHHHhhc
Q 003371 468 KVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGM-EMDKVKQK 546 (825)
Q Consensus 468 ~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~-~~~~~~~~ 546 (825)
+|+++...+. + ..++|....++ +..+.||..+||.+++. +.+. +.+
T Consensus 422 ~v~~v~~~~~--~----------e~~~L~laAal---------------E~~S~HPiA~AIv~~a~-~~~~~~~~----- 468 (713)
T COG2217 422 EVTDVVALDG--D----------EDELLALAAAL---------------EQHSEHPLAKAIVKAAA-ERGLPDVE----- 468 (713)
T ss_pred EEEEEecCCC--C----------HHHHHHHHHHH---------------HhcCCChHHHHHHHHHH-hcCCCCcc-----
Confidence 9999876543 1 11222222211 12477999999999887 4441 111
Q ss_pred ceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEE
Q 003371 547 YSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIA 626 (825)
Q Consensus 547 ~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~ 626 (825)
.|.... ..|+.... +|..++ -|++..+.+.-. ..+ . ....++.+..+|..++.
T Consensus 469 -------~~~~i~-G~Gv~~~v-~g~~v~---vG~~~~~~~~~~----------~~~----~-~~~~~~~~~~~G~t~v~ 521 (713)
T COG2217 469 -------DFEEIP-GRGVEAEV-DGERVL---VGNARLLGEEGI----------DLP----L-LSERIEALESEGKTVVF 521 (713)
T ss_pred -------ceeeec-cCcEEEEE-CCEEEE---EcCHHHHhhcCC----------Ccc----c-hhhhHHHHHhcCCeEEE
Confidence 121111 33443322 444344 498888754211 011 0 44567778889988888
Q ss_pred EEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcc
Q 003371 627 FAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILR 706 (825)
Q Consensus 627 lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~ 706 (825)
++. |-.++|++.+.|++||+++++|++||+.|+++.|+||||..+|++||+++||.+
T Consensus 522 va~-----------------------dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~ 578 (713)
T COG2217 522 VAV-----------------------DGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE 578 (713)
T ss_pred EEE-----------------------CCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh
Confidence 876 337999999999999999999999999999999999999999999999999964
Q ss_pred cccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCC
Q 003371 707 LDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGI 786 (825)
Q Consensus 707 ~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~ 786 (825)
|+|.+.|+||.++|+.||++|++|+|+|||+||||||++||||||||
T Consensus 579 --------------------------------v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG- 625 (713)
T COG2217 579 --------------------------------VRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMG- 625 (713)
T ss_pred --------------------------------heccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeec-
Confidence 89999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHhcCeeeccCCchHHHHHHHHhHHhhcccc
Q 003371 787 QGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCF 823 (825)
Q Consensus 787 ~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~ 823 (825)
+|||+|+|+||++|++|++..++++++.+|+.+.||.
T Consensus 626 ~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~Ik 662 (713)
T COG2217 626 SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIK 662 (713)
T ss_pred CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHH
Confidence 6999999999999999999999999999999888774
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-77 Score=714.88 Aligned_cols=515 Identities=23% Similarity=0.322 Sum_probs=422.2
Q ss_pred ccHHHHHHHHhhhHH--HH--HHHHHHHHHhhhccccCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhC
Q 003371 154 KGLLHFVLEAFKDTT--IL--ILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISN 229 (825)
Q Consensus 154 ~s~~~~~~~~~~~~~--~~--il~v~a~lsl~~g~~~~g~~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~ 229 (825)
.+|++-.|+.++... .+ +..++++.++++| .|.+++.+++.+++--.++.+.+++.++..++|.+. .
T Consensus 171 ~~~~~~a~~~l~~~~~~~~~~L~~~a~~~a~~~~--------~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l-~ 241 (741)
T PRK11033 171 YPIARKALRLIRSGSPFAIETLMSVAAIGALFIG--------ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMAL-V 241 (741)
T ss_pred HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHc--------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-C
Confidence 456666677665422 22 2334455555554 366666666555555666666666667777777654 4
Q ss_pred CCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCcceecCCCCCCCCCeeeecCCCCceeeeCceeeece
Q 003371 230 NIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGY 309 (825)
Q Consensus 230 ~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~ 309 (825)
+..++|+|||++++|++++|+|||+|.+++||+|||||++++|+. .||||+|||||.|+.|. .++.+|+||.+.+|.
T Consensus 242 p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~~-~vdes~lTGEs~Pv~k~--~Gd~V~aGt~~~~G~ 318 (741)
T PRK11033 242 PETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFA-SFDESALTGESIPVERA--TGEKVPAGATSVDRL 318 (741)
T ss_pred CCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEECcE-EeecccccCCCCCEecC--CCCeeccCCEEcCce
Confidence 678999999999999999999999999999999999999999986 89999999999999998 578999999999999
Q ss_pred EEEEEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCC
Q 003371 310 AQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNT 389 (825)
Q Consensus 310 ~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~ 389 (825)
+++.|+++|.+|.+|+|.+++++.+.+++|+|+.+++++.++.++++++++++|++|.. +.+.
T Consensus 319 ~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~--~~~~--------------- 381 (741)
T PRK11033 319 VTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPL--LFAA--------------- 381 (741)
T ss_pred EEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HccC---------------
Confidence 99999999999999999999999899999999999999999999999999999887632 1110
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEE
Q 003371 390 DIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKV 469 (825)
Q Consensus 390 ~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v 469 (825)
.+...+..++++++++|||+|.+++|+++..++.+++|+|+++|+++++|+|+++++||||||||||+|+|+|
T Consensus 382 -------~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v 454 (741)
T PRK11033 382 -------PWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQV 454 (741)
T ss_pred -------CHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEE
Confidence 2334567889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeccccccccccccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceE
Q 003371 470 TKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSI 549 (825)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i 549 (825)
++++..+.. +++ +++..+.+. + ..+.||.++|+++++. +.+.+
T Consensus 455 ~~~~~~~~~---------~~~--~~l~~aa~~------e---------~~s~hPia~Ai~~~a~-~~~~~---------- 497 (741)
T PRK11033 455 TDIHPATGI---------SES--ELLALAAAV------E---------QGSTHPLAQAIVREAQ-VRGLA---------- 497 (741)
T ss_pred EEEEecCCC---------CHH--HHHHHHHHH------h---------cCCCCHHHHHHHHHHH-hcCCC----------
Confidence 998754321 111 222222111 1 1257999999999987 44432
Q ss_pred EEEecCCCCCceeE-EEEE-ecCCCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEE
Q 003371 550 LHVETFNSEKKRSG-VLIR-RKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAF 627 (825)
Q Consensus 550 ~~~~~F~s~~krms-vvv~-~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~l 627 (825)
+||.++.+.+. .-++ ..+|..++ -|+++.+.+ ++ ..+.+.++.+..+|+|++++
T Consensus 498 ---~~~~~~~~~~~g~Gv~~~~~g~~~~---ig~~~~~~~--------------~~----~~~~~~~~~~~~~g~~~v~v 553 (741)
T PRK11033 498 ---IPEAESQRALAGSGIEGQVNGERVL---ICAPGKLPP--------------LA----DAFAGQINELESAGKTVVLV 553 (741)
T ss_pred ---CCCCcceEEEeeEEEEEEECCEEEE---Eecchhhhh--------------cc----HHHHHHHHHHHhCCCEEEEE
Confidence 46666666552 2122 12343333 388877632 11 23445567889999999999
Q ss_pred EEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCccc
Q 003371 628 AYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRL 707 (825)
Q Consensus 628 A~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~ 707 (825)
|+ |.+++|+++++||+|||++++|++|+++|++++|+|||+..+|.++|+++||.
T Consensus 554 a~-----------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-- 608 (741)
T PRK11033 554 LR-----------------------NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-- 608 (741)
T ss_pred EE-----------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--
Confidence 97 44799999999999999999999999999999999999999999999999994
Q ss_pred ccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCC
Q 003371 708 DQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQ 787 (825)
Q Consensus 708 ~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~ 787 (825)
++++.+|+||..+|+.||+. +.|+|+|||+||+|||++|||||||| +
T Consensus 609 -------------------------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g-~ 655 (741)
T PRK11033 609 -------------------------------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMG-S 655 (741)
T ss_pred -------------------------------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEec-C
Confidence 46789999999999999965 68999999999999999999999999 8
Q ss_pred chHHHHHhcCeeeccCCchHHHHHHHHhHHhhcccc
Q 003371 788 GTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCF 823 (825)
Q Consensus 788 gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~ 823 (825)
|+++++++||+++++|++..|+.++++||+++.||.
T Consensus 656 ~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~ 691 (741)
T PRK11033 656 GTDVALETADAALTHNRLRGLAQMIELSRATHANIR 691 (741)
T ss_pred CCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999985
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-76 Score=685.34 Aligned_cols=459 Identities=39% Similarity=0.574 Sum_probs=404.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-hhCCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCcceecC
Q 003371 201 VAVFLVIVVSAFSNFRQARQFDKLSK-ISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDE 279 (825)
Q Consensus 201 ~~v~lv~~v~~~~~~~~~~~~~~l~~-~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l~VDE 279 (825)
+++++..+++.+.+++.++..++|.+ ..++..++|+|+| +++|++.+|+|||+|.+++||+|||||++++|+. .|||
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~~-~vde 81 (499)
T TIGR01494 4 ILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGSC-FVDE 81 (499)
T ss_pred EhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEccE-EEEc
Confidence 34556667778888888888888865 3567899999999 9999999999999999999999999999999965 9999
Q ss_pred CCCCCCCCeeeecCCCCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHH-HHHHHHHHHH
Q 003371 280 SSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLT-STIGKVGLAV 358 (825)
Q Consensus 280 S~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a-~~i~~~~l~~ 358 (825)
|+|||||.|+.|. .++.+++||.+.+|..++.|+.+|.+|..+++...+......++|+|+++++++ .++..+.+++
T Consensus 82 s~LTGEs~pv~k~--~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~l 159 (499)
T TIGR01494 82 SNLTGESVPVLKT--AGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLI 159 (499)
T ss_pred ccccCCCCCeeec--cCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998 477899999999999999999999999999999999877777899999999999 7888888888
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhccccc
Q 003371 359 AFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAM 438 (825)
Q Consensus 359 a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~m~k~~~l 438 (825)
++++++.|+..+... . .+...|..++++++++|||+||++++++++++..+|.++|++
T Consensus 160 a~~~~~~~~~~~~~~--------~--------------~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gil 217 (499)
T TIGR01494 160 ALAVFLFWAIGLWDP--------N--------------SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIV 217 (499)
T ss_pred HHHHHHHHHHHHccc--------c--------------cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcE
Confidence 777777664321100 0 245678889999999999999999999999999999999999
Q ss_pred cccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccccccccCChHHHHHHHHHHhhcCCccccccCCCCCcce
Q 003371 439 VRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAE 518 (825)
Q Consensus 439 vr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~ 518 (825)
+|+++++|+||++++||||||||||+|+|+|++++..+. .+
T Consensus 218 vk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~---------------------------------------~~ 258 (499)
T TIGR01494 218 VRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG---------------------------------------EY 258 (499)
T ss_pred EechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC---------------------------------------Cc
Confidence 999999999999999999999999999999999875421 02
Q ss_pred ecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcccccccCCe
Q 003371 519 FSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGV 598 (825)
Q Consensus 519 ~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~ 598 (825)
.++||.|.|+++++. .. .+...||++.+++|+++++..+ + .|+||+++.+++.|.+
T Consensus 259 ~s~hp~~~ai~~~~~-~~------------~~~~~~f~~~~~~~~~~~~~~~-~---~~~~G~~~~i~~~~~~------- 314 (499)
T TIGR01494 259 LSGHPDERALVKSAK-WK------------ILNVFEFSSVRKRMSVIVRGPD-G---TYVKGAPEFVLSRVKD------- 314 (499)
T ss_pred CCCChHHHHHHHHhh-hc------------CcceeccCCCCceEEEEEecCC-c---EEEeCCHHHHHHhhHH-------
Confidence 367999999999886 21 2356899999999999887522 2 4689999999998852
Q ss_pred eecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHH
Q 003371 599 IKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQ 678 (825)
Q Consensus 599 ~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~ 678 (825)
+.+.+++++.+|+|++++|++. +++|+++++|++||+++++|+.|+
T Consensus 315 -----------~~~~~~~~~~~g~~~~~~a~~~-----------------------~~~g~i~l~d~lr~~~~~~i~~l~ 360 (499)
T TIGR01494 315 -----------LEEKVKELAQSGLRVLAVASKE-----------------------TLLGLLGLEDPLRDDAKETISELR 360 (499)
T ss_pred -----------HHHHHHHHHhCCCEEEEEEECC-----------------------eEEEEEEecCCCchhHHHHHHHHH
Confidence 1234456788999999999832 589999999999999999999999
Q ss_pred hCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhC
Q 003371 679 SAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKK 758 (825)
Q Consensus 679 ~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~ 758 (825)
++|++++|+|||+..+|..+|+++|| ++|++|+||..+|+.+|+.
T Consensus 361 ~~gi~~~~ltGD~~~~a~~ia~~lgi-----------------------------------~~~~~p~~K~~~v~~l~~~ 405 (499)
T TIGR01494 361 EAGIRVIMLTGDNVLTAKAIAKELGI-----------------------------------FARVTPEEKAALVEALQKK 405 (499)
T ss_pred HCCCeEEEEcCCCHHHHHHHHHHcCc-----------------------------------eeccCHHHHHHHHHHHHHC
Confidence 99999999999999999999999986 5889999999999999999
Q ss_pred CCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhcccc
Q 003371 759 GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCF 823 (825)
Q Consensus 759 g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~ 823 (825)
|+.|+|+|||+||+|||++|||||||| |+++||++|++|++..++.++++||+++.||.
T Consensus 406 g~~v~~vGDg~nD~~al~~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~ 464 (499)
T TIGR01494 406 GRVVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIK 464 (499)
T ss_pred CCEEEEECCChhhHHHHHhCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999997 79999999999999999999999999999884
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-74 Score=675.54 Aligned_cols=504 Identities=28% Similarity=0.420 Sum_probs=413.2
Q ss_pred HHHHHHHHhhhccccCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCC-EEEEEEecCcc
Q 003371 172 LLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREA-RRLQISIFDLV 250 (825)
Q Consensus 172 l~v~a~lsl~~g~~~~g~~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g-~~~~I~~~dLv 250 (825)
+.++++++++++ .|.++..|++.+++..+++.+.+++.++..++|.+. .+..++|+|+| ++++|+.++|+
T Consensus 5 ~~~~~~~~~~~~--------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~-~~~~~~v~r~~g~~~~i~~~~l~ 75 (556)
T TIGR01525 5 MALATIAAYAMG--------LVLEGALLLFLFLLGETLEERAKGRASDALSALLAL-APSTARVLQGDGSEEEVPVEELQ 75 (556)
T ss_pred HHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEECCCeEEEEEHHHCC
Confidence 344555566665 377777777777777777777777777777777644 45689999995 99999999999
Q ss_pred cCeEEEeCCCCeeeceEEEEecCcceecCCCCCCCCCeeeecCCCCceeeeCceeeeceEEEEEEEEcccchHHHHHhhc
Q 003371 251 VGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSI 330 (825)
Q Consensus 251 vGDIV~l~~Gd~VPaDgili~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~ 330 (825)
|||+|.+++||+|||||++++|+. .||||+|||||.|+.|. .++.+|+||.+.+|.++++|+++|.+|++|++.+.+
T Consensus 76 ~GDiv~v~~G~~iP~Dg~vi~g~~-~vdes~lTGEs~pv~k~--~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~ 152 (556)
T TIGR01525 76 VGDIVIVRPGERIPVDGVVISGES-EVDESALTGESMPVEKK--EGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLV 152 (556)
T ss_pred CCCEEEECCCCEeccceEEEecce-EEeehhccCCCCCEecC--CcCEEeeceEECCceEEEEEEEecccCHHHHHHHHH
Confidence 999999999999999999999986 89999999999999998 578999999999999999999999999999999999
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHH
Q 003371 331 SSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVV 410 (825)
Q Consensus 331 ~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilv 410 (825)
.+...+++|+|+.+++++.++.++++++++++|++|+. .+. . ..+..++++++
T Consensus 153 ~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~---~~~----------------------~--~~~~~~~~vlv 205 (556)
T TIGR01525 153 EEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLA---LGA----------------------L--GALYRALAVLV 205 (556)
T ss_pred HHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcc----------------------c--hHHHHHHHHHh
Confidence 88888899999999999999999999999888887642 110 1 45778899999
Q ss_pred HHhccchhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccccccccCChH
Q 003371 411 VAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASS 490 (825)
Q Consensus 411 vavP~~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~ 490 (825)
++|||+||+++++++++++++|.++|+++|+++++|+||++++||||||||||+|+|+|.+++..+... .+
T Consensus 206 ~~~P~al~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-------~~-- 276 (556)
T TIGR01525 206 VACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS-------IS-- 276 (556)
T ss_pred hccccchhehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC-------cc--
Confidence 999999999999999999999999999999999999999999999999999999999999987653311 00
Q ss_pred HHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecC
Q 003371 491 IRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKA 570 (825)
Q Consensus 491 ~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~ 570 (825)
..+++..+..+ . ..+.||+++|+++++. +.+.+... . ++ ...+ .
T Consensus 277 ~~~~l~~a~~~------e---------~~~~hp~~~Ai~~~~~-~~~~~~~~--~-~~-~~~~----------------~ 320 (556)
T TIGR01525 277 EEELLALAAAL------E---------QSSSHPLARAIVRYAK-KRGLELPK--Q-ED-VEEV----------------P 320 (556)
T ss_pred HHHHHHHHHHH------h---------ccCCChHHHHHHHHHH-hcCCCccc--c-cC-eeEe----------------c
Confidence 11122111111 1 1257999999999997 55544221 0 00 0000 1
Q ss_pred CCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhh
Q 003371 571 DNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLK 650 (825)
Q Consensus 571 ~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~ 650 (825)
+..+..+++|+++..+..|+.. ..++. ....++..++.++.+|+|++.++.
T Consensus 321 ~~gi~~~~~g~~~~~lg~~~~~-~~~~~-------~~~~~~~~~~~~~~~g~~~~~v~~--------------------- 371 (556)
T TIGR01525 321 GKGVEATVDGQEEVRIGNPRLL-ELAAE-------PISASPDLLNEGESQGKTVVFVAV--------------------- 371 (556)
T ss_pred CCeEEEEECCeeEEEEecHHHH-hhcCC-------CchhhHHHHHHHhhCCcEEEEEEE---------------------
Confidence 1113334444444444444321 11111 111233556778899999999986
Q ss_pred ccCeEEeeeecccCCCcccHHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHH
Q 003371 651 EEGLTLLGIVGIKDPCRPGVQKAVEACQSAG-VEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEE 729 (825)
Q Consensus 651 e~~l~llG~v~i~DplR~~v~~aI~~l~~aG-I~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~ 729 (825)
|.+++|.+.++|++|||++++|+.|+++| +++.|+|||+..++.++++++||..
T Consensus 372 --~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~----------------------- 426 (556)
T TIGR01525 372 --DGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE----------------------- 426 (556)
T ss_pred --CCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe-----------------------
Confidence 34799999999999999999999999999 9999999999999999999999954
Q ss_pred HHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHH
Q 003371 730 RIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVA 809 (825)
Q Consensus 730 ~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv 809 (825)
+|++..|+||..+++.+++.++.|+|+|||.||+||+++||||++|| .+++.+++.||+++.+|+++.|+
T Consensus 427 ---------~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~ 496 (556)
T TIGR01525 427 ---------VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLP 496 (556)
T ss_pred ---------eeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHH
Confidence 79999999999999999999999999999999999999999999999 89999999999999999999999
Q ss_pred HHHHHhHHhhcccc
Q 003371 810 TVLSPGDQLHSGCF 823 (825)
Q Consensus 810 ~~i~~gR~i~~ni~ 823 (825)
.++++||+++.||.
T Consensus 497 ~~i~~~r~~~~~i~ 510 (556)
T TIGR01525 497 TAIDLSRKTRRIIK 510 (556)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999985
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-73 Score=661.97 Aligned_cols=483 Identities=26% Similarity=0.378 Sum_probs=403.5
Q ss_pred HHHHHHHHHhhhccccCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEEEEEEecCcc
Q 003371 171 ILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLV 250 (825)
Q Consensus 171 il~v~a~lsl~~g~~~~g~~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLv 250 (825)
++.++++++++++ .|+|+..|++.+++..+++.+.+++.++..++|.+. .+.+++|+|+|++++|++++|+
T Consensus 4 l~~~a~~~~~~~~--------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~-~~~~~~v~r~g~~~~i~~~~l~ 74 (536)
T TIGR01512 4 LMALAALGAVAIG--------EYLEGALLLLLFSIGETLEEYASGRARRALKALMEL-APDTARVLRGGSLEEVAVEELK 74 (536)
T ss_pred HHHHHHHHHHHHh--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEECCEEEEEEHHHCC
Confidence 3455666677665 489998777777777777777777777777777654 4678999999999999999999
Q ss_pred cCeEEEeCCCCeeeceEEEEecCcceecCCCCCCCCCeeeecCCCCceeeeCceeeeceEEEEEEEEcccchHHHHHhhc
Q 003371 251 VGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSI 330 (825)
Q Consensus 251 vGDIV~l~~Gd~VPaDgili~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~ 330 (825)
|||+|.+++||+|||||++++|+. .||||+|||||.|+.|. .++.+|+||.+.+|.++++|+++|.+|.+|++.+++
T Consensus 75 ~GDiv~v~~G~~iP~Dg~ii~g~~-~vdes~lTGEs~pv~k~--~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~ 151 (536)
T TIGR01512 75 VGDVVVVKPGERVPVDGVVLSGTS-TVDESALTGESVPVEKA--PGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLV 151 (536)
T ss_pred CCCEEEEcCCCEeecceEEEeCcE-EEEecccCCCCCcEEeC--CCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHH
Confidence 999999999999999999999986 89999999999999998 578999999999999999999999999999999999
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHH
Q 003371 331 SSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVV 410 (825)
Q Consensus 331 ~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilv 410 (825)
.+...+++|+|+.+++++.++.++.+++++++++++. +... | . ..+..++++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---------~------------~--~~~~~~~svlv 205 (536)
T TIGR01512 152 EEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPG---LLKR---------W------------P--FWVYRALVLLV 205 (536)
T ss_pred HHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH---Hhcc---------c------------H--HHHHHHHHHHh
Confidence 8888889999999999999999998888877776642 2110 0 1 15777899999
Q ss_pred HHhccchhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccccccccCChH
Q 003371 411 VAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASS 490 (825)
Q Consensus 411 vavP~~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~ 490 (825)
++|||+||++++++++.++++|.++|+++|+++++|++|+++++|||||||||+|+|+|.+++..
T Consensus 206 ~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~--------------- 270 (536)
T TIGR01512 206 VASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA--------------- 270 (536)
T ss_pred hcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH---------------
Confidence 99999999999999999999999999999999999999999999999999999999999987531
Q ss_pred HHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCc--eeEEEEEe
Q 003371 491 IRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKK--RSGVLIRR 568 (825)
Q Consensus 491 ~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~k--rmsvvv~~ 568 (825)
+++....++. ..+.||.++|+++++. +.+ ||++.+. ..++....
T Consensus 271 --~~l~~a~~~e---------------~~~~hp~~~Ai~~~~~-~~~----------------~~~~~~~~~g~gi~~~~ 316 (536)
T TIGR01512 271 --EVLRLAAAAE---------------QASSHPLARAIVDYAR-KRE----------------NVESVEEVPGEGVRAVV 316 (536)
T ss_pred --HHHHHHHHHh---------------ccCCCcHHHHHHHHHH-hcC----------------CCcceEEecCCeEEEEE
Confidence 2222221111 1256999999999987 432 1222111 12222222
Q ss_pred cCCCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhh
Q 003371 569 KADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQR 648 (825)
Q Consensus 569 ~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~ 648 (825)
+|.+++ .|+++.+.+.. + ..+..+|.+++.++.
T Consensus 317 -~g~~~~---ig~~~~~~~~~------------~------------~~~~~~~~~~~~v~~------------------- 349 (536)
T TIGR01512 317 -DGGEVR---IGNPRSLEAAV------------G------------ARPESAGKTIVHVAR------------------- 349 (536)
T ss_pred -CCeEEE---EcCHHHHhhcC------------C------------cchhhCCCeEEEEEE-------------------
Confidence 333333 48876553211 0 034566777766654
Q ss_pred hhccCeEEeeeecccCCCcccHHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCH
Q 003371 649 LKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGV-EIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTD 727 (825)
Q Consensus 649 ~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI-~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~ 727 (825)
|..++|.+.++|++|||++++|+.|+++|+ ++.|+|||+..+|..+++++||..
T Consensus 350 ----~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~--------------------- 404 (536)
T TIGR01512 350 ----DGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE--------------------- 404 (536)
T ss_pred ----CCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh---------------------
Confidence 457999999999999999999999999999 999999999999999999999964
Q ss_pred HHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchH
Q 003371 728 EERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTS 807 (825)
Q Consensus 728 ~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~s 807 (825)
+|++..|++|..+++.+++.++.|+|+|||.||+||+++||+|++||.+|++.++++||+++++|+++.
T Consensus 405 -----------~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~ 473 (536)
T TIGR01512 405 -----------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSR 473 (536)
T ss_pred -----------hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHH
Confidence 688999999999999999999999999999999999999999999997789999999999999999999
Q ss_pred HHHHHHHhHHhhcccc
Q 003371 808 VATVLSPGDQLHSGCF 823 (825)
Q Consensus 808 Iv~~i~~gR~i~~ni~ 823 (825)
|.+++++||+++.||.
T Consensus 474 l~~~i~~~r~~~~~i~ 489 (536)
T TIGR01512 474 LPQAIRLARRTRRIVK 489 (536)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999884
|
. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-74 Score=657.04 Aligned_cols=539 Identities=24% Similarity=0.342 Sum_probs=426.2
Q ss_pred CccHHHHHHHHhhhHHHH---HHHHHHHHHhhhcc-------ccCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH--
Q 003371 153 PKGLLHFVLEAFKDTTIL---ILLVCAALSLGFGI-------KEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQ-- 220 (825)
Q Consensus 153 ~~s~~~~~~~~~~~~~~~---il~v~a~lsl~~g~-------~~~g~~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~-- 220 (825)
.++|+.-.|.++++...- +..++...++++++ .. ..+..+||.-.|++.++.+ .+|.+.+.
T Consensus 291 G~~fy~~A~ksL~~g~~nMdvLv~L~t~aay~~S~~~~~~~~~~-~~~~tfFdt~~MLi~fi~l------gr~LE~~Ak~ 363 (951)
T KOG0207|consen 291 GRPFYLAAYKSLKRGSANMDVLVVLGTTAAYFYSIFSLLAAVVF-DSPPTFFDTSPMLITFITL------GRWLESLAKG 363 (951)
T ss_pred ceeeHHHHHHHHhcCCCCceeehhhHHHHHHHHHHHHHHHHHHc-cCcchhccccHHHHHHHHH------HHHHHHHhhc
Confidence 567777777777764211 11122222222221 11 2244577777776665554 56654443
Q ss_pred -----HHHHhchhCCCeeEEEeCCE-EEEEEecCcccCeEEEeCCCCeeeceEEEEecCcceecCCCCCCCCCeeeecCC
Q 003371 221 -----FDKLSKISNNIKVEVVREAR-RLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDST 294 (825)
Q Consensus 221 -----~~~l~~~~~~~~v~V~R~g~-~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l~VDES~LTGEs~pv~k~~~ 294 (825)
..+|-.+ .+.++.++-+|+ .++|++..|.+||+|.+.||++||+||++++|++ .||||.+|||+.||.|.
T Consensus 364 kts~alskLmsl-~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss-~VDEs~iTGEs~PV~Kk-- 439 (951)
T KOG0207|consen 364 KTSEALSKLMSL-APSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSS-EVDESLITGESMPVPKK-- 439 (951)
T ss_pred cchHHHHHHhhc-CcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEeCce-eechhhccCCceecccC--
Confidence 3344333 456788888886 8999999999999999999999999999999998 99999999999999998
Q ss_pred CCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 003371 295 NNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGN 374 (825)
Q Consensus 295 ~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~ 374 (825)
.+..+.+||.+.+|+..+.+|++|.+|.+++|.+++++++..++|+|+.+|+++.+|.++.+++++++|++|++..++..
T Consensus 440 ~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~ 519 (951)
T KOG0207|consen 440 KGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVF 519 (951)
T ss_pred CCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccc
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999865333211
Q ss_pred CCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEE
Q 003371 375 TKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVI 454 (825)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~I 454 (825)
.. ... ++..+...|..+++++++||||+|.||+|++...+....+++|+|+|..+++|.+.++++|
T Consensus 520 ~~----~~~----------~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tV 585 (951)
T KOG0207|consen 520 KY----PRS----------FFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTV 585 (951)
T ss_pred cC----cch----------hhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEE
Confidence 00 111 1236778889999999999999999999999999999999999999999999999999999
Q ss_pred EecCcCccccCceEEEEEEeccccccccccccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHH
Q 003371 455 CTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVL 534 (825)
Q Consensus 455 c~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~ 534 (825)
.||||||||+|+++|+++....+.... .+.+.+. .+. +..+.||..+|+.+|+.
T Consensus 586 vFDKTGTLT~G~~~V~~~~~~~~~~~~-------~e~l~~v-~a~-----------------Es~SeHPig~AIv~yak- 639 (951)
T KOG0207|consen 586 VFDKTGTLTEGKPTVVDFKSLSNPISL-------KEALALV-AAM-----------------ESGSEHPIGKAIVDYAK- 639 (951)
T ss_pred EEcCCCceecceEEEEEEEecCCcccH-------HHHHHHH-HHH-----------------hcCCcCchHHHHHHHHH-
Confidence 999999999999999998776543110 0111111 111 11256999999999998
Q ss_pred HcCCchHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHH
Q 003371 535 EMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENII 614 (825)
Q Consensus 535 ~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i 614 (825)
+.... .....++....|..+.+...+.+ +++++ .-|.-+++... |... .+.+++..
T Consensus 640 ~~~~~----~~~~~~~~~~~~pg~g~~~~~~~---~~~~i---~iGN~~~~~r~--------~~~~------~~~i~~~~ 695 (951)
T KOG0207|consen 640 EKLVE----PNPEGVLSFEYFPGEGIYVTVTV---DGNEV---LIGNKEWMSRN--------GCSI------PDDILDAL 695 (951)
T ss_pred hcccc----cCccccceeecccCCCcccceEE---eeeEE---eechHHHHHhc--------CCCC------chhHHHhh
Confidence 44311 11112223333433332212222 23333 34887777542 2211 23367777
Q ss_pred HHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHH
Q 003371 615 HGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFT 694 (825)
Q Consensus 615 ~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~t 694 (825)
++....|..+.+++. |-++.|+++++|++|||+..+|+.||+.||+|.|+||||..|
T Consensus 696 ~~~e~~g~tvv~v~v-----------------------n~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~a 752 (951)
T KOG0207|consen 696 TESERKGQTVVYVAV-----------------------NGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAA 752 (951)
T ss_pred hhHhhcCceEEEEEE-----------------------CCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHH
Confidence 777889999998887 457999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHH
Q 003371 695 AKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPA 774 (825)
Q Consensus 695 A~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapA 774 (825)
|+++|+++||.. |+|...|+||.+.|+.||++++.|||+|||+||+||
T Consensus 753 A~svA~~VGi~~--------------------------------V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPA 800 (951)
T KOG0207|consen 753 ARSVAQQVGIDN--------------------------------VYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPA 800 (951)
T ss_pred HHHHHHhhCcce--------------------------------EEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHH
Confidence 999999999654 999999999999999999999999999999999999
Q ss_pred hhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhccc
Q 003371 775 LKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGC 822 (825)
Q Consensus 775 Lk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni 822 (825)
|.+|||||+|| .|+++|.|+|||||+.+|+..++.+++.+|+...+|
T Consensus 801 LA~AdVGIaig-~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rI 847 (951)
T KOG0207|consen 801 LAQADVGIAIG-AGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRI 847 (951)
T ss_pred HHhhccceeec-cccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhH
Confidence 99999999999 789999999999999999999999999999988877
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-72 Score=653.76 Aligned_cols=477 Identities=28% Similarity=0.415 Sum_probs=393.1
Q ss_pred CcchhhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHhchhCCCeeEEEeC-CEEEEEEecCcccCeEEEeCCCCeeeceEE
Q 003371 191 EGWYEGGSIFVAVFLV-IVVSAFSNFRQARQFDKLSKISNNIKVEVVRE-ARRLQISIFDLVVGDIVFLKIGDQIPADGL 268 (825)
Q Consensus 191 ~~~~d~~~i~~~v~lv-~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~-g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgi 268 (825)
.+||+..+++++++++ -.++....++.++..++|.+. .+..++|+|+ |++++|++++|+|||+|.+++||+|||||+
T Consensus 51 ~~~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~-~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~ 129 (562)
T TIGR01511 51 HTFFDASAMLITFILLGRWLEMLAKGRASDALSKLAKL-QPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGT 129 (562)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceE
Confidence 4688888776555444 355555555666666666544 4567888885 677999999999999999999999999999
Q ss_pred EEecCcceecCCCCCCCCCeeeecCCCCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHH
Q 003371 269 FLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLT 348 (825)
Q Consensus 269 li~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a 348 (825)
+++|++ .||||+|||||.|+.|. .++.+|+||.+.+|.+.++|+++|.+|.+|++.+++.+....++|+|+.+++++
T Consensus 130 v~~g~~-~vdes~lTGEs~pv~k~--~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a 206 (562)
T TIGR01511 130 VIEGES-EVDESLVTGESLPVPKK--VGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVA 206 (562)
T ss_pred EEECce-EEehHhhcCCCCcEEcC--CCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHH
Confidence 999987 89999999999999998 578999999999999999999999999999999999998889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHH
Q 003371 349 STIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYS 428 (825)
Q Consensus 349 ~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~ 428 (825)
.++.++++++++++|++|. ..+..++++++++|||+|++++|+++..+
T Consensus 207 ~~~~~~v~~~a~~~~~~~~--------------------------------~~~~~~~svlvvacPcaL~la~p~a~~~~ 254 (562)
T TIGR01511 207 GYFVPVVIAIALITFVIWL--------------------------------FALEFAVTVLIIACPCALGLATPTVIAVA 254 (562)
T ss_pred HHHHHHHHHHHHHHHHHHH--------------------------------HHHHHHHHHHHHhccchhhhHHHHHHHHH
Confidence 9999998888888777652 13567899999999999999999999999
Q ss_pred HHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccccccccCChHHHHHHHHHHhhcCCcccc
Q 003371 429 MKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVS 508 (825)
Q Consensus 429 ~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~ 508 (825)
+.+++++|+++|+++++|+|+++++||||||||||+|+|+|++++..+... .++++.+ ..++.
T Consensus 255 ~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~--------~~~~l~~---aa~~e------ 317 (562)
T TIGR01511 255 TGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDRD--------RTELLAL---AAALE------ 317 (562)
T ss_pred HHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCCC--------HHHHHHH---HHHHh------
Confidence 999999999999999999999999999999999999999999987543210 0122222 11111
Q ss_pred ccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHh
Q 003371 509 KLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAM 588 (825)
Q Consensus 509 ~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~ 588 (825)
..+.||.++|+++++. +.+.+.... .+|... ...++.... ++.++ ..|+++.+.+.
T Consensus 318 ---------~~s~HPia~Ai~~~~~-~~~~~~~~~---------~~~~~~-~g~Gi~~~~-~g~~~---~iG~~~~~~~~ 373 (562)
T TIGR01511 318 ---------AGSEHPLAKAIVSYAK-EKGITLVEV---------SDFKAI-PGIGVEGTV-EGTKI---QLGNEKLLGEN 373 (562)
T ss_pred ---------ccCCChHHHHHHHHHH-hcCCCcCCC---------CCeEEE-CCceEEEEE-CCEEE---EEECHHHHHhC
Confidence 1256999999999987 555432111 111111 112333322 33333 45888876431
Q ss_pred cccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcc
Q 003371 589 CSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRP 668 (825)
Q Consensus 589 c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~ 668 (825)
|. .++ ++..+|.+++.++. |.+++|++.++|++||
T Consensus 374 --------~~--~~~------------~~~~~g~~~~~~~~-----------------------~~~~~g~~~~~d~l~~ 408 (562)
T TIGR01511 374 --------AI--KID------------GKAEQGSTSVLVAV-----------------------NGELAGVFALEDQLRP 408 (562)
T ss_pred --------CC--CCC------------hhhhCCCEEEEEEE-----------------------CCEEEEEEEecccccH
Confidence 11 011 13467888887765 5579999999999999
Q ss_pred cHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHH
Q 003371 669 GVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDK 748 (825)
Q Consensus 669 ~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK 748 (825)
|++++|+.|++.|+++.|+|||+..+|.++|+++||. ++++..|++|
T Consensus 409 ~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~---------------------------------~~~~~~p~~K 455 (562)
T TIGR01511 409 EAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN---------------------------------VRAEVLPDDK 455 (562)
T ss_pred HHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc---------------------------------EEccCChHHH
Confidence 9999999999999999999999999999999999993 5888999999
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhcccc
Q 003371 749 LLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCF 823 (825)
Q Consensus 749 ~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~ 823 (825)
..+++.++++++.|+|+|||.||+||+++|||||+|| .|+++++++||+++++|+++.|+.++++||+++.||.
T Consensus 456 ~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~ 529 (562)
T TIGR01511 456 AALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIK 529 (562)
T ss_pred HHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 7999999999999999999999999999999998874
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-72 Score=680.99 Aligned_cols=491 Identities=25% Similarity=0.355 Sum_probs=403.2
Q ss_pred cchhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEE
Q 003371 192 GWYEGGSIFVAV-FLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFL 270 (825)
Q Consensus 192 ~~~d~~~i~~~v-~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili 270 (825)
.|||..++++.+ ++--+++.....+..+..++|.+. .+..++|+|+|++++|+.++|+|||+|.+++||+|||||+++
T Consensus 284 ~~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l-~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~ 362 (834)
T PRK10671 284 LYYEASAMIIGLINLGHMLEARARQRSSKALEKLLDL-TPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEIT 362 (834)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEE
Confidence 477765554433 333444444444555555555544 457889999999999999999999999999999999999999
Q ss_pred ecCcceecCCCCCCCCCeeeecCCCCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHHHH
Q 003371 271 DGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTST 350 (825)
Q Consensus 271 ~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~ 350 (825)
+|+. .||||+|||||.|+.|. .++.+|+||.+.+|.+.++|+++|.+|.+|++.+++++.+..++|+|+..++++.+
T Consensus 363 ~g~~-~vdeS~lTGEs~pv~k~--~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~ 439 (834)
T PRK10671 363 QGEA-WLDEAMLTGEPIPQQKG--EGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAV 439 (834)
T ss_pred EceE-EEeehhhcCCCCCEecC--CCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHH
Confidence 9975 99999999999999998 57899999999999999999999999999999999998888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHH
Q 003371 351 IGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMK 430 (825)
Q Consensus 351 i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~ 430 (825)
+.+++++++++++++|+. .+.. ..+...+..++++++++|||+|++++|++++.++.
T Consensus 440 ~v~~v~~~a~~~~~~~~~---~~~~--------------------~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~ 496 (834)
T PRK10671 440 FVPVVVVIALVSAAIWYF---FGPA--------------------PQIVYTLVIATTVLIIACPCALGLATPMSIISGVG 496 (834)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCc--------------------hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHH
Confidence 999999999888887632 2210 02445677899999999999999999999999999
Q ss_pred HHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccccccccCChHHHHHHHHHHhhcCCcccccc
Q 003371 431 RMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKL 510 (825)
Q Consensus 431 ~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~ 510 (825)
+++++|+|+|+++++|+|++++++|||||||||+|+|+|.+++..+.. ++ .+++....++.+
T Consensus 497 ~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~---------~~--~~~l~~a~~~e~------- 558 (834)
T PRK10671 497 RAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGV---------DE--AQALRLAAALEQ------- 558 (834)
T ss_pred HHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCC---------CH--HHHHHHHHHHhC-------
Confidence 999999999999999999999999999999999999999988653321 11 122222222221
Q ss_pred CCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcc
Q 003371 511 KPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCS 590 (825)
Q Consensus 511 ~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~ 590 (825)
.+.||.++|+++++. ..... ...+|..... .++.... +|. .+++|+++.+....
T Consensus 559 --------~s~hp~a~Ai~~~~~-~~~~~-----------~~~~~~~~~g-~Gv~~~~-~g~---~~~~G~~~~~~~~~- 612 (834)
T PRK10671 559 --------GSSHPLARAILDKAG-DMTLP-----------QVNGFRTLRG-LGVSGEA-EGH---ALLLGNQALLNEQQ- 612 (834)
T ss_pred --------CCCCHHHHHHHHHHh-hCCCC-----------CcccceEecc-eEEEEEE-CCE---EEEEeCHHHHHHcC-
Confidence 256999999999875 22110 1122332221 2332222 333 24569999775321
Q ss_pred cccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcccH
Q 003371 591 HYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGV 670 (825)
Q Consensus 591 ~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v 670 (825)
++ +..+.+.++.++.+|.+++.+|+ +..++|++++.|++||++
T Consensus 613 -----------~~---~~~~~~~~~~~~~~g~~~v~va~-----------------------~~~~~g~~~l~d~~r~~a 655 (834)
T PRK10671 613 -----------VD---TKALEAEITAQASQGATPVLLAV-----------------------DGKAAALLAIRDPLRSDS 655 (834)
T ss_pred -----------CC---hHHHHHHHHHHHhCCCeEEEEEE-----------------------CCEEEEEEEccCcchhhH
Confidence 11 23456667788899999999987 335899999999999999
Q ss_pred HHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHH
Q 003371 671 QKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLL 750 (825)
Q Consensus 671 ~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~ 750 (825)
+++|+.|++.|+++.|+|||+..+|.++|+++||.. ++++..|++|..
T Consensus 656 ~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~--------------------------------~~~~~~p~~K~~ 703 (834)
T PRK10671 656 VAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE--------------------------------VIAGVLPDGKAE 703 (834)
T ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE--------------------------------EEeCCCHHHHHH
Confidence 999999999999999999999999999999999964 799999999999
Q ss_pred HHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhcccc
Q 003371 751 MVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCF 823 (825)
Q Consensus 751 lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~ 823 (825)
+++.++.+++.|+|+|||.||+|||+.||+||+|| +|++.++++||+++++|++..|+.++++||.++.||.
T Consensus 704 ~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~ 775 (834)
T PRK10671 704 AIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMK 775 (834)
T ss_pred HHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 8999999999999999999999999999999988763
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-74 Score=638.41 Aligned_cols=598 Identities=22% Similarity=0.317 Sum_probs=460.7
Q ss_pred CCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCCCcchhhhHHHHHHHHH
Q 003371 127 YGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLV 206 (825)
Q Consensus 127 ~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~~~d~~~i~~~v~lv 206 (825)
+|+. .+.++..-.+.||.|++..+. .+|-+++.|.-..|++.+..+|..+++.= +.||.++ +.++..
T Consensus 161 ~G~~-~~~~i~~a~~~~G~N~fdi~v-PtF~eLFkE~A~aPfFVFQVFcvgLWCLD--------eyWYySl---FtLfMl 227 (1160)
T KOG0209|consen 161 TGHE-EESEIKLAKHKYGKNKFDIVV-PTFSELFKEHAVAPFFVFQVFCVGLWCLD--------EYWYYSL---FTLFML 227 (1160)
T ss_pred cCcc-hHHHHHHHHHHhcCCccccCC-ccHHHHHHHhccCceeeHhHHhHHHHHhH--------HHHHHHH---HHHHHH
Confidence 5776 455777777789999999875 48999999999999999999998888643 4688754 334445
Q ss_pred HHHHHHHHHHHHHHHHHHhchhC-CCeeEEEeCCEEEEEEecCcccCeEEEeCC---CCeeeceEEEEecCcceecCCCC
Q 003371 207 IVVSAFSNFRQARQFDKLSKISN-NIKVEVVREARRLQISIFDLVVGDIVFLKI---GDQIPADGLFLDGHSLQVDESSM 282 (825)
Q Consensus 207 ~~v~~~~~~~~~~~~~~l~~~~~-~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~---Gd~VPaDgili~g~~l~VDES~L 282 (825)
+.+++.--++|.+...++.+..+ +..+.|+|+++|+.+...||+|||+|.+.. ...||||.+++.|++ .|||++|
T Consensus 228 i~fE~tlV~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gsc-iVnEaML 306 (1160)
T KOG0209|consen 228 IAFEATLVKQRMRTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGSC-IVNEAML 306 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecce-eechhhh
Confidence 55666666777777777766644 468999999999999999999999999976 558999999999987 8999999
Q ss_pred CCCCCeeeecCC---------------CCceeeeCceee-------------eceEEEEEEEEcccchHHHHHhhccCCC
Q 003371 283 TGESDHVEVDST---------------NNPFLFSGSKVA-------------DGYAQMLVVSVGMNTAWGEMMSSISSDS 334 (825)
Q Consensus 283 TGEs~pv~k~~~---------------~~~~l~sGt~v~-------------~G~~~~~V~~vG~~T~~g~i~~~~~~~~ 334 (825)
||||.|..|.+- +...||.||+++ ||-+.+.|++||.+|..|++++.+....
T Consensus 307 tGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~a 386 (1160)
T KOG0209|consen 307 TGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSA 386 (1160)
T ss_pred cCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecc
Confidence 999999998741 456899999997 4788999999999999999999998766
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhc
Q 003371 335 NERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIP 414 (825)
Q Consensus 335 ~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP 414 (825)
++-|.-... . +.+++.+++|.+....|.+.....+... +-...|.-++.|+...+|
T Consensus 387 ervTaNn~E--t-------f~FILFLlVFAiaAa~Yvwv~Gskd~~R---------------srYKL~LeC~LIlTSVvP 442 (1160)
T KOG0209|consen 387 ERVTANNRE--T-------FIFILFLLVFAIAAAGYVWVEGSKDPTR---------------SRYKLFLECTLILTSVVP 442 (1160)
T ss_pred eeeeeccHH--H-------HHHHHHHHHHHHHhhheEEEecccCcch---------------hhhheeeeeeEEEeccCC
Confidence 665532221 1 1123333444444444433221111101 222345667778888899
Q ss_pred cchhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEeccc-cccccccccCChHHHH
Q 003371 415 EGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQE-SIVQETYCKIASSIRD 493 (825)
Q Consensus 415 ~~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~-~~~~~~~~~~~~~~~~ 493 (825)
.-||+-++++..-+...+.|.+++|..+-.+.-.|+++..|||||||||+..|.|..+.-... .......+..+.+...
T Consensus 443 pELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~ 522 (1160)
T KOG0209|consen 443 PELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVL 522 (1160)
T ss_pred CCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHH
Confidence 999999999999999999999999999999999999999999999999999999998754221 1111122233333433
Q ss_pred HHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCc-h----HHHhhcceEEEEecCCCCCceeEEEEEe
Q 003371 494 LFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGME-M----DKVKQKYSILHVETFNSEKKRSGVLIRR 568 (825)
Q Consensus 494 ~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~-~----~~~~~~~~i~~~~~F~s~~krmsvvv~~ 568 (825)
.+. .|+ +.... ++ ...|+|.|+|.+++..+.+..+ . +..-...+|.+.+.|+|..|||+|++..
T Consensus 523 vlA----scH--sLv~l-e~----~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~ 591 (1160)
T KOG0209|consen 523 VLA----SCH--SLVLL-ED----KLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASH 591 (1160)
T ss_pred HHH----HHH--HHHHh-cC----cccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhc
Confidence 332 222 22221 11 2799999999999663222111 0 1111246789999999999999999876
Q ss_pred cCC---CeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHH
Q 003371 569 KAD---NTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKA 645 (825)
Q Consensus 569 ~~~---~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~ 645 (825)
... .++.+.+|||||.|..+-. +.+..++++..+++.+|.||+|++||++.. -......+.
T Consensus 592 ~~~g~s~k~~~aVKGAPEvi~~ml~--------------dvP~dY~~iYk~ytR~GsRVLALg~K~l~~--~~~~q~rd~ 655 (1160)
T KOG0209|consen 592 QGPGSSEKYFVAVKGAPEVIQEMLR--------------DVPKDYDEIYKRYTRQGSRVLALGYKPLGD--MMVSQVRDL 655 (1160)
T ss_pred ccCCCceEEEEEecCCHHHHHHHHH--------------hCchhHHHHHHHHhhccceEEEEecccccc--cchhhhhhh
Confidence 432 2578899999999987754 345678889999999999999999999963 111112224
Q ss_pred hhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCccccc-----------c----
Q 003371 646 RQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQ-----------Q---- 710 (825)
Q Consensus 646 ~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~-----------~---- 710 (825)
+++..|++|+|.|++.|.-|+||+++++|+.+++.+.+|+|+||||+.||.++|+++||....- .
T Consensus 656 ~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w 735 (1160)
T KOG0209|consen 656 KREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEW 735 (1160)
T ss_pred hhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeE
Confidence 5777899999999999999999999999999999999999999999999999999999986410 0
Q ss_pred ---------------------cccceeeechhhhcCCH-HHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCC
Q 003371 711 ---------------------VEKGEVVEGVEFRNYTD-EERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDG 768 (825)
Q Consensus 711 ---------------------~~~~~vi~G~~~~~~~~-~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG 768 (825)
....++++|..+..+.. +++.+.++.+.||||++|.||..++..||+.|++++|+|||
T Consensus 736 ~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDG 815 (1160)
T KOG0209|consen 736 VSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDG 815 (1160)
T ss_pred ecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCC
Confidence 02346788888887765 45778899999999999999999999999999999999999
Q ss_pred ccCHHHhhhCCccEecCCCchH
Q 003371 769 TNDAPALKEADVGLSMGIQGTE 790 (825)
Q Consensus 769 ~NDapALk~AdVGiamg~~gt~ 790 (825)
+||+.|||+||||+|+= ++++
T Consensus 816 TNDVGALK~AhVGVALL-~~~~ 836 (1160)
T KOG0209|consen 816 TNDVGALKQAHVGVALL-NNPE 836 (1160)
T ss_pred Ccchhhhhhcccceehh-cCCh
Confidence 99999999999999997 4444
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-71 Score=602.16 Aligned_cols=628 Identities=25% Similarity=0.331 Sum_probs=472.5
Q ss_pred HHHhhcCCCcCCCCCC--ccH-HHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCCCcchhhhHHHHHHHHHHHHHHHHH
Q 003371 138 RRSQLFGANTYHKPPP--KGL-LHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSN 214 (825)
Q Consensus 138 ~r~~~~G~N~~~~~~~--~s~-~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~~~d~~~i~~~v~lv~~v~~~~~ 214 (825)
.++++|-+|.+...+- -+| ...++++|+...++++++.+...++..+.-......|.. ..+.+++..+-.++.|
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~p---l~fvl~itl~keavdd 150 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGP---LGFVLTITLIKEAVDD 150 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHH---HHHHHHHHHHHHHHHH
Confidence 3566788888776542 244 345788999988888888887777665432222222222 1122233334456666
Q ss_pred HHHHHHHHHHhchhCCCeeEEE-eCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecC----cceecCCCCCCCCCee
Q 003371 215 FRQARQFDKLSKISNNIKVEVV-REARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGH----SLQVDESSMTGESDHV 289 (825)
Q Consensus 215 ~~~~~~~~~l~~~~~~~~v~V~-R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~----~l~VDES~LTGEs~pv 289 (825)
+++.+.-+. .|+...+++ |+|-... ++++|.|||+|.+..+++||||.+++..+ ++.|-+-.|+||++..
T Consensus 151 ~~r~~rd~~----~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWK 225 (1051)
T KOG0210|consen 151 LKRRRRDRE----LNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWK 225 (1051)
T ss_pred HHHHHhhhh----hhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCcccce
Confidence 655544433 344444444 7776555 99999999999999999999999999643 3589999999999854
Q ss_pred eecCC---------------------------------------------CCceeeeCceeeeceEEEEEEEEcccchHH
Q 003371 290 EVDST---------------------------------------------NNPFLFSGSKVADGYAQMLVVSVGMNTAWG 324 (825)
Q Consensus 290 ~k~~~---------------------------------------------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g 324 (825)
-|-+- -.+.|+++|.|.+|.+.++|++||.+|
T Consensus 226 Lrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dt--- 302 (1051)
T KOG0210|consen 226 LRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDT--- 302 (1051)
T ss_pred eeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccH---
Confidence 33210 136799999999999999999999999
Q ss_pred HHHhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHH
Q 003371 325 EMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAA 404 (825)
Q Consensus 325 ~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (825)
+-+.+.+.++.+---++..+|.+.+++....+.++++... ..|.. . .+..+++.
T Consensus 303 RsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~------~~g~~------~--------------~wyi~~~R 356 (1051)
T KOG0210|consen 303 RSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVA------MKGFG------S--------------DWYIYIIR 356 (1051)
T ss_pred HHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHH------hhcCC------C--------------chHHHHHH
Confidence 4445556677777788889999988776655554443221 12211 0 33455667
Q ss_pred HHHHHHHHhccchhHHHHHHHHHHHHHHhcc----ccccccchhhhcccCeEEEEecCcCccccCceEEEEEEecccccc
Q 003371 405 AVTIVVVAIPEGLPLAVTLTLAYSMKRMMTD----QAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIV 480 (825)
Q Consensus 405 av~ilvvavP~~Lplavtl~la~~~~~m~k~----~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~ 480 (825)
++.++...+|..|-..+.++..+-...+..| |.+||....-|.||++.++.+|||||||+|+|.+++++++.-.+.
T Consensus 357 fllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s 436 (1051)
T KOG0210|consen 357 FLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYS 436 (1051)
T ss_pred HHHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeecc
Confidence 7777888899999999999999988888887 456999999999999999999999999999999999998765443
Q ss_pred ccc--------------------------cccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHH
Q 003371 481 QET--------------------------YCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVL 534 (825)
Q Consensus 481 ~~~--------------------------~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~ 534 (825)
.+. ...++..+.+ +.+++++|++...... +++...+...+|.|.||++|..
T Consensus 437 ~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~-~V~alalCHNVTPv~e-~~ge~sYQAaSPDEVAiVkwTe- 513 (1051)
T KOG0210|consen 437 AETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRN-AVLALALCHNVTPVFE-DDGEVSYQAASPDEVAIVKWTE- 513 (1051)
T ss_pred HhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHH-HHHHHHHhccCCcccC-CCceEEeecCCCCeEEEEEeee-
Confidence 321 0112223333 3456677776554432 3334567788999999999986
Q ss_pred HcCCchH-------------HHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcccccccCCeeec
Q 003371 535 EMGMEMD-------------KVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKS 601 (825)
Q Consensus 535 ~~g~~~~-------------~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~ 601 (825)
..|+..- ....+|+|++++||+|+.||||++++.+..+++..|.|||.-.+-..-.
T Consensus 514 ~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq----------- 582 (1051)
T KOG0210|consen 514 TVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQ----------- 582 (1051)
T ss_pred ecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccc-----------
Confidence 6665421 2224799999999999999999999998778899999999887754321
Q ss_pred CChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccc-----------hhHH-----hhhhhccCeEEeeeecccCC
Q 003371 602 MDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNN-----------DVKA-----RQRLKEEGLTLLGIVGIKDP 665 (825)
Q Consensus 602 l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~-----------~~~~-----~~~~~e~~l~llG~v~i~Dp 665 (825)
..+.+++...+||.+||||+.+|.|.++++|.+..+ +-.+ -....|.||.++|+.|.+|.
T Consensus 583 ----~NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDk 658 (1051)
T KOG0210|consen 583 ----YNDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDK 658 (1051)
T ss_pred ----cchhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHH
Confidence 235678889999999999999999999886632110 0000 12357899999999999999
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCccccccc-----------------------ccceeeechhh
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQV-----------------------EKGEVVEGVEF 722 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~-----------------------~~~~vi~G~~~ 722 (825)
++++|+.+++.||+|||+|||+|||..+||..||+..++...++.. ...++|+|+.+
T Consensus 659 LQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl 738 (1051)
T KOG0210|consen 659 LQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESL 738 (1051)
T ss_pred HhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchH
Confidence 9999999999999999999999999999999999999999866542 35689999877
Q ss_pred hc---CCHHHHHhhccC--eeEEEecCHHHHHHHHHHHHhC-CCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhc
Q 003371 723 RN---YTDEERIQKVDK--IRVMARSSPFDKLLMVQCLKKK-GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESS 796 (825)
Q Consensus 723 ~~---~~~~~~~~~~~~--~~V~ar~sP~dK~~lV~~Lq~~-g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aa 796 (825)
.- +-++|+.+.... ..|+|||+|.||+++++.||++ |..|+.+|||.||+.|+++||+||.+-...-..|.-||
T Consensus 739 ~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAA 818 (1051)
T KOG0210|consen 739 EFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAA 818 (1051)
T ss_pred HHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhc
Confidence 63 445777776654 4699999999999999999986 99999999999999999999999954323333678899
Q ss_pred CeeeccCCchHHHHHHHH-hHHhhccc
Q 003371 797 DIVILDDDFTSVATVLSP-GDQLHSGC 822 (825)
Q Consensus 797 Divlldd~f~sIv~~i~~-gR~i~~ni 822 (825)
|+.|. .|+.+-+++.| ||+-|.+-
T Consensus 819 DfSIt--qF~Hv~rLLl~HGR~SYkrs 843 (1051)
T KOG0210|consen 819 DFSIT--QFSHVSRLLLWHGRNSYKRS 843 (1051)
T ss_pred cccHH--HHHHHHHHhhccccchHHHH
Confidence 99999 89999999866 99999763
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-70 Score=647.28 Aligned_cols=654 Identities=24% Similarity=0.296 Sum_probs=504.3
Q ss_pred HHhhcCCCcCCCCCC--ccH-HHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCCCcchhhhHHHHHHHHHHHHHHHHHH
Q 003371 139 RSQLFGANTYHKPPP--KGL-LHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNF 215 (825)
Q Consensus 139 r~~~~G~N~~~~~~~--~s~-~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~~~d~~~i~~~v~lv~~v~~~~~~ 215 (825)
++..|-.|.+...+- -+| .+.+|+||++..++++++.++++++. +.+.+ ++ ..++++++++.+++++|.
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~~~----~~---~~~~pl~~vl~~t~iKd~ 99 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSPFN----PY---TTLVPLLFVLGITAIKDA 99 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-ccccC----cc---ceeeceeeeehHHHHHHH
Confidence 555788898876542 233 45699999999999999999999887 54322 22 345667778888899999
Q ss_pred HHHHHHHHHhchhCCCeeEEEeCCE-EEEEEecCcccCeEEEeCCCCeeeceEEEEecCc----ceecCCCCCCCCCeee
Q 003371 216 RQARQFDKLSKISNNIKVEVVREAR-RLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHS----LQVDESSMTGESDHVE 290 (825)
Q Consensus 216 ~~~~~~~~l~~~~~~~~v~V~R~g~-~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~----l~VDES~LTGEs~pv~ 290 (825)
.++.+..+.+++.|+.++.|.|++. ..+..|.+|+|||+|++..++.+|||.++++++. |+|+++.|+||+....
T Consensus 100 ~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~ 179 (1151)
T KOG0206|consen 100 IEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKV 179 (1151)
T ss_pred HhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccce
Confidence 8888888899899999999999644 7999999999999999999999999999997654 7999999999998766
Q ss_pred ecCC---------------------------------------------CCceeeeCceeee-ceEEEEEEEEcccchHH
Q 003371 291 VDST---------------------------------------------NNPFLFSGSKVAD-GYAQMLVVSVGMNTAWG 324 (825)
Q Consensus 291 k~~~---------------------------------------------~~~~l~sGt~v~~-G~~~~~V~~vG~~T~~g 324 (825)
|... .++.++.|+++.+ -++.+.|+.+|++|
T Consensus 180 k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dt--- 256 (1151)
T KOG0206|consen 180 KQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDT--- 256 (1151)
T ss_pred eeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcc---
Confidence 5420 1235778888876 46899999999999
Q ss_pred HHHhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHH
Q 003371 325 EMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAA 404 (825)
Q Consensus 325 ~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (825)
|+|.+...+..+++++++.+|.....+..+.++++++..+.. .++........+ ..|.... .+........|..
T Consensus 257 K~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~--~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~f~t 330 (1151)
T KOG0206|consen 257 KLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGF--AIWTRQDGRHNG-EWWYLSP---SEAAYAGFVHFLT 330 (1151)
T ss_pred hHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhh--heeeeecccccC-chhhhcC---chHHHHHHHHHHH
Confidence 667777778889999999999876555444333333222221 111111111111 1111111 1122244555677
Q ss_pred HHHHHHHHhccchhHHHHHHHHHHHHHHhc----------cccccccchhhhcccCeEEEEecCcCccccCceEEEEEEe
Q 003371 405 AVTIVVVAIPEGLPLAVTLTLAYSMKRMMT----------DQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWL 474 (825)
Q Consensus 405 av~ilvvavP~~Lplavtl~la~~~~~m~k----------~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~ 474 (825)
++.++...+|..|...+.+.-.+.+.-+.+ ..+.+|..+.-|.||++++|++|||||||+|.|.+.++.+
T Consensus 331 ~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi 410 (1151)
T KOG0206|consen 331 FIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSI 410 (1151)
T ss_pred HHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccc
Confidence 788899999999999998888776654443 3567899999999999999999999999999999999999
Q ss_pred ccccccccccc-----------------------------------cCChHHHHHHHHHHhhcCCccccccCCCCCccee
Q 003371 475 GQESIVQETYC-----------------------------------KIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEF 519 (825)
Q Consensus 475 ~~~~~~~~~~~-----------------------------------~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~ 519 (825)
++..|...... ...+.....+....++|++...+...+.....+.
T Consensus 411 ~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~ 490 (1151)
T KOG0206|consen 411 NGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYE 490 (1151)
T ss_pred cCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeee
Confidence 88765432100 0111223344566778887766542122245677
Q ss_pred cCChhHHHHHHHHHHHcCCchH------------HHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHH
Q 003371 520 SGSPTEKAVLSWAVLEMGMEMD------------KVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILA 587 (825)
Q Consensus 520 ~g~p~e~All~~a~~~~g~~~~------------~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~ 587 (825)
..+|.|.|++..|. ++|..+- .....|+++++.+|+|.||||||+++.++|. +++|||||+..|.+
T Consensus 491 A~SPDE~AlV~aAr-~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~-i~LycKGADsvI~e 568 (1151)
T KOG0206|consen 491 AESPDEAALVEAAR-ELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGR-ILLYCKGADSVIFE 568 (1151)
T ss_pred cCCCcHHHHHHHHH-hcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCc-EEEEEcCcchhhHh
Confidence 88999999999998 8887652 1235799999999999999999999998875 99999999999999
Q ss_pred hcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccc---------------hhHHhhhhhcc
Q 003371 588 MCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNN---------------DVKARQRLKEE 652 (825)
Q Consensus 588 ~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~---------------~~~~~~~~~e~ 652 (825)
+++. -....++...+++++||.+||||+|+|||+++++|+.... .++...+.+|+
T Consensus 569 rL~~----------~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk 638 (1151)
T KOG0206|consen 569 RLSK----------NGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEK 638 (1151)
T ss_pred hhhh----------cchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHh
Confidence 9985 1235677788899999999999999999999987743221 11223456799
Q ss_pred CeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccc----------------------
Q 003371 653 GLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQ---------------------- 710 (825)
Q Consensus 653 ~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~---------------------- 710 (825)
||+++|..+|||++++||+++|+.|++||||+||+|||..+||.+||..|+++.++..
T Consensus 639 ~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~ 718 (1151)
T KOG0206|consen 639 DLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALK 718 (1151)
T ss_pred cchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHH
Confidence 9999999999999999999999999999999999999999999999999999976322
Q ss_pred --------------------cccceeeechhhhcCCHHHHH----hh--ccCeeEEEecCHHHHHHHHHHHHh-CCCEEE
Q 003371 711 --------------------VEKGEVVEGVEFRNYTDEERI----QK--VDKIRVMARSSPFDKLLMVQCLKK-KGHVVA 763 (825)
Q Consensus 711 --------------------~~~~~vi~G~~~~~~~~~~~~----~~--~~~~~V~ar~sP~dK~~lV~~Lq~-~g~vVa 763 (825)
...+++++|+.+....+++.. +. -++..++||+||.||+.+|+..++ .+.+++
T Consensus 719 ~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TL 798 (1151)
T KOG0206|consen 719 ETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTL 798 (1151)
T ss_pred HHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEE
Confidence 036789999988866554322 22 356779999999999999999985 489999
Q ss_pred EEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHH-HHHhHHhhcccc
Q 003371 764 VTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATV-LSPGDQLHSGCF 823 (825)
Q Consensus 764 ~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~-i~~gR~i~~ni~ 823 (825)
++|||.||.+|+++|||||.++..+-..|..+||+-|. .|.-+-++ +-+||+.|.|+-
T Consensus 799 AIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIa--qFrfL~rLLLVHGhW~Y~R~a 857 (1151)
T KOG0206|consen 799 AIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIA--QFRFLERLLLVHGHWSYIRLA 857 (1151)
T ss_pred EeeCCCccchheeeCCcCeeeccchhhhhhhcccchHH--HHHHHhhhheeecceeHHHHH
Confidence 99999999999999999996655555579999999999 79988888 489999998874
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-62 Score=518.32 Aligned_cols=492 Identities=27% Similarity=0.416 Sum_probs=387.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeC-CEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCcceecC
Q 003371 201 VAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVRE-ARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDE 279 (825)
Q Consensus 201 ~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~-g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l~VDE 279 (825)
+.+++..+-+++.+-+-..|...|.+.+.....+++++ |..+.|++.+|..||+|.+..||+||+||.+++|.. .|||
T Consensus 74 fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdE 152 (681)
T COG2216 74 FTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDE 152 (681)
T ss_pred HHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecch
Confidence 33444445556666676677777776666667777776 899999999999999999999999999999999987 9999
Q ss_pred CCCCCCCCeeeecCC-CCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 003371 280 SSMTGESDHVEVDST-NNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAV 358 (825)
Q Consensus 280 S~LTGEs~pv~k~~~-~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~ 358 (825)
|++||||.||.|.+. +-.-+-.||.|++.+.+..+++.-.+|.+-||+.+++.++.++||-+--|+-+ ..++.+
T Consensus 153 SAITGESaPViresGgD~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iL-----L~~LTl 227 (681)
T COG2216 153 SAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTIL-----LSGLTL 227 (681)
T ss_pred hhccCCCcceeeccCCCcccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHH-----HHHHHH
Confidence 999999999999853 11348899999999999999999999999999999999999999977655543 333333
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCccccc-CCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhcccc
Q 003371 359 AFLVLVVLLARYFTGNTKGENGIKEYN-GSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQA 437 (825)
Q Consensus 359 a~l~~iv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~m~k~~~ 437 (825)
.+++.++.+..| . .|. +... .+...++++|+.+|-.+.--++-.=..+|.|+.+-|+
T Consensus 228 iFL~~~~Tl~p~--a---------~y~~g~~~-----------~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NV 285 (681)
T COG2216 228 IFLLAVATLYPF--A---------IYSGGGAA-----------SVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNV 285 (681)
T ss_pred HHHHHHHhhhhH--H---------HHcCCCCc-----------CHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhce
Confidence 333322222111 1 111 1111 1345567888999987766666555679999999999
Q ss_pred ccccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccccccccCChHHHHHHHHHHhhcCCccccccCCCCCcc
Q 003371 438 MVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVA 517 (825)
Q Consensus 438 lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~ 517 (825)
+-++..|+|..|.+|++..|||||+|.|+-.-.+++....... .+ +.....+.+ +.
T Consensus 286 iA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~gv~~-----------~~-la~aa~lsS---l~--------- 341 (681)
T COG2216 286 IATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPGVSE-----------EE-LADAAQLAS---LA--------- 341 (681)
T ss_pred eecCcchhhhcCCccEEEecccCceeecchhhhheecCCCCCH-----------HH-HHHHHHHhh---hc---------
Confidence 9999999999999999999999999998877777765443211 11 112222221 11
Q ss_pred eecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcccccccCC
Q 003371 518 EFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNG 597 (825)
Q Consensus 518 ~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g 597 (825)
-..|.-+.++..|. +.+.+.+...... .....||+.+.|++++-.. ++ +-.-|||.+.+...-.. .|
T Consensus 342 --DeTpEGrSIV~LA~-~~~~~~~~~~~~~-~~~fvpFtA~TRmSGvd~~--~~---~~irKGA~dai~~~v~~----~~ 408 (681)
T COG2216 342 --DETPEGRSIVELAK-KLGIELREDDLQS-HAEFVPFTAQTRMSGVDLP--GG---REIRKGAVDAIRRYVRE----RG 408 (681)
T ss_pred --cCCCCcccHHHHHH-HhccCCCcccccc-cceeeecceecccccccCC--CC---ceeecccHHHHHHHHHh----cC
Confidence 12466678888888 6665443222111 2456799999988887542 22 34579999999876541 11
Q ss_pred eeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHH
Q 003371 598 VIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEAC 677 (825)
Q Consensus 598 ~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l 677 (825)
......++...++.+..|-..++++. |-.++|++.++|-++||.+|-+.++
T Consensus 409 ------g~~p~~l~~~~~~vs~~GGTPL~V~~-----------------------~~~~~GVI~LkDivK~Gi~ERf~el 459 (681)
T COG2216 409 ------GHIPEDLDAAVDEVSRLGGTPLVVVE-----------------------NGRILGVIYLKDIVKPGIKERFAEL 459 (681)
T ss_pred ------CCCCHHHHHHHHHHHhcCCCceEEEE-----------------------CCEEEEEEEehhhcchhHHHHHHHH
Confidence 12345678888999999999999875 4469999999999999999999999
Q ss_pred HhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHh
Q 003371 678 QSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKK 757 (825)
Q Consensus 678 ~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~ 757 (825)
|+.||+.+|+||||+.||.+||+|.|+.. ..|.++|+||..+|+.-|.
T Consensus 460 R~MgIkTvM~TGDN~~TAa~IA~EAGVDd--------------------------------fiAeatPEdK~~~I~~eQ~ 507 (681)
T COG2216 460 RKMGIKTVMITGDNPLTAAAIAAEAGVDD--------------------------------FIAEATPEDKLALIRQEQA 507 (681)
T ss_pred HhcCCeEEEEeCCCHHHHHHHHHHhCchh--------------------------------hhhcCChHHHHHHHHHHHh
Confidence 99999999999999999999999999976 5899999999999999999
Q ss_pred CCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhh
Q 003371 758 KGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLH 819 (825)
Q Consensus 758 ~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~ 819 (825)
+|+.|||||||+||||||.+||||+||. +||.+|||++.+|=+|.|...+.+++..|+...
T Consensus 508 ~grlVAMtGDGTNDAPALAqAdVg~AMN-sGTqAAkEAaNMVDLDS~PTKlievV~IGKqlL 568 (681)
T COG2216 508 EGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLL 568 (681)
T ss_pred cCcEEEEcCCCCCcchhhhhcchhhhhc-cccHHHHHhhcccccCCCccceehHhhhhhhhe
Confidence 9999999999999999999999999999 999999999999999999999999999998754
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=308.17 Aligned_cols=226 Identities=31% Similarity=0.562 Sum_probs=192.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCcceec
Q 003371 199 IFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVD 278 (825)
Q Consensus 199 i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l~VD 278 (825)
+++.+++..++..+.+++.+++.+++++...+..++|+|||+++++++.||+|||||.|++||++||||++++...+.||
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~~vd 81 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSAYVD 81 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEEEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceeccccccc
Confidence 45566677788888999999999998776555559999999999999999999999999999999999999993345999
Q ss_pred CCCCCCCCCeeeec---CCCCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHHHHHHHHH
Q 003371 279 ESSMTGESDHVEVD---STNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVG 355 (825)
Q Consensus 279 ES~LTGEs~pv~k~---~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~ 355 (825)
||.+|||+.|+.|. ...++++|+||.+.+|++.++|++||.+|..|++.+.......+++++++.+++++.++.++.
T Consensus 82 ~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (230)
T PF00122_consen 82 ESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIII 161 (230)
T ss_dssp CHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcc
Confidence 99999999999997 236899999999999999999999999999999999998888888999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhcc
Q 003371 356 LAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTD 435 (825)
Q Consensus 356 l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~m~k~ 435 (825)
++++++++++++.. .. .. .+...+..++++++++||++||+++++++.+++++|.++
T Consensus 162 ~~~~~~~~~~~~~~---~~------~~--------------~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~ 218 (230)
T PF00122_consen 162 LAIAILVFIIWFFN---DS------GI--------------SFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKN 218 (230)
T ss_dssp HHHHHHHHHHCHTG---ST------TC--------------HCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHT
T ss_pred cccchhhhccceec---cc------cc--------------ccccccccccceeeeecccceeehHHHHHHHHHHHHHHC
Confidence 77777666543221 00 01 445678888999999999999999999999999999999
Q ss_pred ccccccchhhhc
Q 003371 436 QAMVRKLPACET 447 (825)
Q Consensus 436 ~~lvr~l~a~E~ 447 (825)
|+++|+++++|+
T Consensus 219 ~i~v~~~~a~E~ 230 (230)
T PF00122_consen 219 GIIVKNLSALEA 230 (230)
T ss_dssp TEEESSTTHHHH
T ss_pred CEEEeCcccccC
Confidence 999999999996
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-24 Score=223.90 Aligned_cols=97 Identities=45% Similarity=0.714 Sum_probs=91.5
Q ss_pred CeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHh
Q 003371 653 GLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQ 732 (825)
Q Consensus 653 ~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~ 732 (825)
++.++|.+.+.||+||+++++|+.|+++|++++|+|||+..+|.++|+++||..
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------- 168 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------- 168 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS--------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc--------------------------
Confidence 578999999999999999999999999999999999999999999999999943
Q ss_pred hccCeeEEEec--CHHHH--HHHHHHHHhCCCEEEEEcCCccCHHHhhhCC
Q 003371 733 KVDKIRVMARS--SPFDK--LLMVQCLKKKGHVVAVTGDGTNDAPALKEAD 779 (825)
Q Consensus 733 ~~~~~~V~ar~--sP~dK--~~lV~~Lq~~g~vVa~~GDG~NDapALk~Ad 779 (825)
..|+|+. +|++| ..+++.|+..++.|+|+|||.||++||++||
T Consensus 169 ----~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 169 ----SIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp ----EEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred ----ccccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 2389999 99999 9999999977779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.57 E-value=8.4e-15 Score=129.07 Aligned_cols=72 Identities=40% Similarity=0.725 Sum_probs=64.1
Q ss_pred eecCChhHHHHHHHHHHHc--CCchHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcccc
Q 003371 518 EFSGSPTEKAVLSWAVLEM--GMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHY 592 (825)
Q Consensus 518 ~~~g~p~e~All~~a~~~~--g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~ 592 (825)
+..|+|+|.||+.|+. ++ +.+....+..+++++.+||||++|||+|+++ +++.+.+|+|||||.||++|+++
T Consensus 18 ~~~G~ptE~ALl~~~~-~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~--~~~~~~~~~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 18 EIIGDPTEKALLRFAK-KLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR--NDGKYILYVKGAPEVILDRCTHI 91 (91)
T ss_pred cccCCcCHHHHHHHHH-HcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe--CCCEEEEEcCCChHHHHHhcCCC
Confidence 4899999999999998 78 4567889999999999999999999999998 33357779999999999999864
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.6e-14 Score=128.27 Aligned_cols=125 Identities=26% Similarity=0.322 Sum_probs=107.1
Q ss_pred EEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhc
Q 003371 655 TLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKV 734 (825)
Q Consensus 655 ~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~ 734 (825)
...+.+.---.+=++++++|++|++. ++|++.|||..-+....|+-.||...
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 34566666677789999999999999 99999999999999999999998653
Q ss_pred cCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCC--CchHHHHHhcCeeeccCCchHHHHHH
Q 003371 735 DKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGI--QGTEVAKESSDIVILDDDFTSVATVL 812 (825)
Q Consensus 735 ~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~--~gt~vAk~aaDivlldd~f~sIv~~i 812 (825)
+|||...|+.|..+++.|++.++.|.|+|||.||.+||++||+||..=. ...+-+.++||+++- |...++.+.
T Consensus 72 ---rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik--~i~e~ldl~ 146 (152)
T COG4087 72 ---RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK--EIAEILDLL 146 (152)
T ss_pred ---eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhh--hHHHHHHHh
Confidence 4899999999999999999999999999999999999999999986522 234456799999988 566666554
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.7e-11 Score=102.38 Aligned_cols=66 Identities=33% Similarity=0.549 Sum_probs=62.3
Q ss_pred CCHHHHHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHH
Q 003371 112 GGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALS 179 (825)
Q Consensus 112 ggv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls 179 (825)
.+++++++.|+|+...||++++ +.+|+++||+|.+++++++++|+.++++|.++++++|++++++|
T Consensus 4 ~~~~~v~~~l~t~~~~GLs~~e--v~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 4 LSVEEVLKRLNTSSSQGLSSEE--VEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp SSHHHHHHHHTTBTSSBBTHHH--HHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHCcCCCCCCCHHH--HHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 3789999999999999998855 99999999999999999999999999999999999999999987
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=99.13 E-value=7.7e-11 Score=96.85 Aligned_cols=62 Identities=32% Similarity=0.478 Sum_probs=57.2
Q ss_pred HhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhhc
Q 003371 120 ALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFG 183 (825)
Q Consensus 120 ~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g 183 (825)
.|+++...||+.++ +.+|+++||.|++++++++++|+.++++|.++++++|++++++|+++|
T Consensus 2 ~l~~~~~~GLs~~~--v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEE--AARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 47888888998865 999999999999999988999999999999999999999999998775
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.5e-08 Score=111.19 Aligned_cols=203 Identities=18% Similarity=0.323 Sum_probs=143.1
Q ss_pred CcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchh-----------------hc----
Q 003371 580 GAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEE-----------------TA---- 638 (825)
Q Consensus 580 Ga~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e-----------------~~---- 638 (825)
|-.+.+...|+.++| ...+.||+...|+++++....-...| .|++||||+....- ..
T Consensus 698 g~ad~~~eACTdfWd-Gadi~PlSg~dkkkV~DFY~RaclsG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWD-GADIIPLSGRDKKKVKDFYLRACLSG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcC-CceeeecCcchHHHHHHHHHHHhhcc-cchheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 778899999999998 34678999999999988887766666 69999999753110 00
Q ss_pred ------ccchhHHh------------------hhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHH
Q 003371 639 ------YNNDVKAR------------------QRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFT 694 (825)
Q Consensus 639 ------~~~~~~~~------------------~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~t 694 (825)
.+-..+.. -...-.+.+|.|+|....+.|++....|+.|-++-|+.+..+-.+...
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 00000000 011235678999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCccccccc---------------------------------------ccceeeech-------hhhcCCHH
Q 003371 695 AKAIATECGILRLDQQV---------------------------------------EKGEVVEGV-------EFRNYTDE 728 (825)
Q Consensus 695 A~aIA~~~GI~~~~~~~---------------------------------------~~~~vi~G~-------~~~~~~~~ 728 (825)
.+-.|+++||-...... ..+..+.-+ .|+.++..
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 99999999997532210 000111111 11111110
Q ss_pred --HH-----Hhh-----------------cc-CeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccC--HHHhhhCCcc
Q 003371 729 --ER-----IQK-----------------VD-KIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTND--APALKEADVG 781 (825)
Q Consensus 729 --~~-----~~~-----------------~~-~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~ND--apALk~AdVG 781 (825)
.+ ..+ +| -+-.|..++|+.--++++.+|+.|++|+++|...|- .-..-+|||+
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadIS 1015 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADIS 1015 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEcccee
Confidence 00 000 11 123789999999999999999999999999998884 3356789999
Q ss_pred Eec
Q 003371 782 LSM 784 (825)
Q Consensus 782 iam 784 (825)
|++
T Consensus 1016 ial 1018 (1354)
T KOG4383|consen 1016 IAL 1018 (1354)
T ss_pred EEe
Confidence 987
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.2e-09 Score=109.49 Aligned_cols=130 Identities=13% Similarity=0.059 Sum_probs=97.3
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeec-hhhhcCCHHHHHhhccCeeEEEec
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEG-VEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G-~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
+++|++++.|+.+++.| ++.++||-....+..+++++||..-.. ..+.+++ ..+ +. . .. .
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~a---n~l~~~~~g~~---tG--------~--~~--~ 128 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLC---HKLEIDDSDRV---VG--------Y--QL--R 128 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhc---eeeEEecCCee---EC--------e--ee--c
Confidence 67999999999999975 999999999999999999999964211 0111111 000 00 0 11 3
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHh
Q 003371 744 SPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPG 815 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~g 815 (825)
.|.+|...++.+++.|..+.++|||.||.||++.|++|+++. +.+..+++||=.=.--+.+.+..++.+.
T Consensus 129 ~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 129 QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred CcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 577999999999988878899999999999999999999996 5666666665444445677777777664
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.93 E-value=4.5e-09 Score=108.77 Aligned_cols=129 Identities=22% Similarity=0.304 Sum_probs=94.7
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEe-c
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMAR-S 743 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar-~ 743 (825)
+++|++++.++.|++.|+++.++||.....+..+.+.+|+..-... ....++..+.. .+.+. .
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~---~~~~~~~~~~~-------------~~~~~~~ 148 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFAN---RLEVEDGKLTG-------------LVEGPIV 148 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEee---EEEEECCEEEE-------------EecCccc
Confidence 5899999999999999999999999999999999999998642100 00000000000 01111 1
Q ss_pred CHHHHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHH
Q 003371 744 SPFDKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATV 811 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~ 811 (825)
.+..|..+++.+.++ | +.+.++||+.||.+|++.|+++++++ +.+..+++||.+|.++||..+..+
T Consensus 149 ~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 149 DASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred CCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 123466677665544 2 34778999999999999999999985 678899999999999999988754
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.91 E-value=5.9e-09 Score=107.69 Aligned_cols=146 Identities=21% Similarity=0.256 Sum_probs=99.7
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechh--hhc------CC----------
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVE--FRN------YT---------- 726 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~--~~~------~~---------- 726 (825)
.+.|++.++|++|++.|+++.++||.+...+..+++++++..+....+++.+....+ +.. +.
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 488999999999999999999999999999999999999864321111222221100 000 00
Q ss_pred --------------------HHHHHhhcc--CeeEE-----Ee--cCHHHHHHHHHHHHhC-C---CEEEEEcCCccCHH
Q 003371 727 --------------------DEERIQKVD--KIRVM-----AR--SSPFDKLLMVQCLKKK-G---HVVAVTGDGTNDAP 773 (825)
Q Consensus 727 --------------------~~~~~~~~~--~~~V~-----ar--~sP~dK~~lV~~Lq~~-g---~vVa~~GDG~NDap 773 (825)
.+.+.+.+. .+.+. .. ....+|...++.+.+. | ..++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 001111111 11111 11 2234788878777654 2 35899999999999
Q ss_pred HhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHH
Q 003371 774 ALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATV 811 (825)
Q Consensus 774 ALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~ 811 (825)
|++.|++|+||+ ++.+.+|+.||+|..+++=..|.++
T Consensus 178 ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhh
Confidence 999999999999 8999999999999987666666544
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=7.9e-09 Score=112.52 Aligned_cols=131 Identities=21% Similarity=0.320 Sum_probs=99.4
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEe-c
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMAR-S 743 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar-~ 743 (825)
|+.||+++.++.|+++|+++.++||.....+..+.+++|+..-... .-.+.+|..-. .+... +
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an--~lei~dg~ltg--------------~v~g~iv 244 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVAN--ELEIMDGKLTG--------------NVLGDIV 244 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEe--EEEEECCEEEe--------------EecCccC
Confidence 5789999999999999999999999998889999999998531100 00011111000 01100 1
Q ss_pred CHHHHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 744 SPFDKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
....|...++.+.++ | +.+.++|||.||.+|++.|++|+|| ++.+..|+.||.++-..++..+..++-
T Consensus 245 ~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 245 DAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred CcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 236788888887654 3 5688999999999999999999999 678889999999999999999987764
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.4e-08 Score=106.50 Aligned_cols=149 Identities=27% Similarity=0.269 Sum_probs=107.4
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccce------------------------------
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGE------------------------------ 715 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~------------------------------ 715 (825)
+.+.++++|+++++.|++|.++||.....++.+.+++|+..+-...+++.
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~ 100 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQG 100 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhccC
Confidence 89999999999999999999999999999999999999974211100000
Q ss_pred ---eeech---------------------------hhhcCC----------H---HHH----Hhhcc-CeeEEEecCH--
Q 003371 716 ---VVEGV---------------------------EFRNYT----------D---EER----IQKVD-KIRVMARSSP-- 745 (825)
Q Consensus 716 ---vi~G~---------------------------~~~~~~----------~---~~~----~~~~~-~~~V~ar~sP-- 745 (825)
..... ++.... . ++. .+.++ ...++.++.|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~ 180 (264)
T COG0561 101 IALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPIS 180 (264)
T ss_pred ceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCce
Confidence 00000 000000 0 111 11111 2234444444
Q ss_pred -------HHHHHHHHHHHhC-CC---EEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHH
Q 003371 746 -------FDKLLMVQCLKKK-GH---VVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSP 814 (825)
Q Consensus 746 -------~dK~~lV~~Lq~~-g~---vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~ 814 (825)
.+|..-++.|.+. |- -|+++||+.||.+||+.|+.|+||| ++.+.+|+.||++....+-..|..++++
T Consensus 181 lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 181 LDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred EEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHHHHHH
Confidence 2788888888773 43 3999999999999999999999999 7899999999988899999999999875
Q ss_pred h
Q 003371 815 G 815 (825)
Q Consensus 815 g 815 (825)
-
T Consensus 260 ~ 260 (264)
T COG0561 260 L 260 (264)
T ss_pred H
Confidence 3
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.9e-08 Score=106.24 Aligned_cols=66 Identities=29% Similarity=0.353 Sum_probs=55.1
Q ss_pred HHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 747 DKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 747 dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
.|..-++.|.+. | +.|+++|||.||.+||+.|++|+||| ++.+.+|+.||+|..+++=..|..+++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHH
Confidence 455555555443 2 45899999999999999999999999 899999999999998888888888875
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=3.7e-08 Score=102.71 Aligned_cols=147 Identities=20% Similarity=0.193 Sum_probs=102.0
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeee---chhhh-------------------
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVE---GVEFR------------------- 723 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~---G~~~~------------------- 723 (825)
+.|.+.++|+++++.|+++.++||.....+..+++++|+..+-...+++.+.. ++.+.
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRFP 100 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhcc
Confidence 78999999999999999999999999999999999999853211111222211 11000
Q ss_pred ----------------------cCCHHHHHhhcc----CeeE-----EEecCHH--HHHHHHHHHHhC----CCEEEEEc
Q 003371 724 ----------------------NYTDEERIQKVD----KIRV-----MARSSPF--DKLLMVQCLKKK----GHVVAVTG 766 (825)
Q Consensus 724 ----------------------~~~~~~~~~~~~----~~~V-----~ar~sP~--dK~~lV~~Lq~~----g~vVa~~G 766 (825)
....++..+.+. ...+ +....|. .|..-++.+.+. ...++++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~G 180 (230)
T PRK01158 101 EASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIG 180 (230)
T ss_pred ccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEC
Confidence 000011111111 1111 1223333 377777777654 24589999
Q ss_pred CCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 767 DGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 767 DG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
|+.||.+|++.|++|+||| ++.+.+|+.||+|..+++=.++.++++
T Consensus 181 D~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 181 DSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 9999999999999999999 899999999999998888888888875
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=6.1e-08 Score=103.52 Aligned_cols=66 Identities=30% Similarity=0.304 Sum_probs=53.4
Q ss_pred HHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcC--eeeccCCchHHHHHHH
Q 003371 747 DKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSD--IVILDDDFTSVATVLS 813 (825)
Q Consensus 747 dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaD--ivlldd~f~sIv~~i~ 813 (825)
.|..-++.|.+. | +-|+++|||.||.+||+.|+.|+||| ++.+.+|+.|| .|..+++=.++..+++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 355555555443 2 45899999999999999999999999 89999999988 6777777788888875
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=4.8e-08 Score=104.69 Aligned_cols=66 Identities=23% Similarity=0.233 Sum_probs=55.3
Q ss_pred HHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCe--eeccCCchHHHHHHH
Q 003371 747 DKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDI--VILDDDFTSVATVLS 813 (825)
Q Consensus 747 dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDi--vlldd~f~sIv~~i~ 813 (825)
.|..-++.|.+. | ..|+++|||.||.+||+.|+.|+||| ++.+.+|++||. |..+++-.+|..+|+
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 466666666554 2 45899999999999999999999999 899999999996 666778888888885
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.73 E-value=6.5e-08 Score=101.57 Aligned_cols=148 Identities=21% Similarity=0.206 Sum_probs=101.8
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCccccccccccee---------------------------
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEV--------------------------- 716 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~v--------------------------- 716 (825)
..+-|.+.+++++++++|+++.+.||.....+..+..++++..+....+++.+
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 45779999999999999999999999999999999999998632111111111
Q ss_pred --------------eech---hhh------c-----------------------CCH-------HHHHhhccCeeEEEec
Q 003371 717 --------------VEGV---EFR------N-----------------------YTD-------EERIQKVDKIRVMARS 743 (825)
Q Consensus 717 --------------i~G~---~~~------~-----------------------~~~-------~~~~~~~~~~~V~ar~ 743 (825)
.... ... . ... +++.+.++....+.+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 0000 000 0 000 1122222221122222
Q ss_pred -------C--HHHHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHH
Q 003371 744 -------S--PFDKLLMVQCLKKK----GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVAT 810 (825)
Q Consensus 744 -------s--P~dK~~lV~~Lq~~----g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~ 810 (825)
+ ..+|..-++.|.+. .+.++++||+.||.+||+.|+.|+||+ ++++..|+.||.+..+.|=..|.+
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~~ 252 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVAK 252 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHHH
Confidence 2 24788888888753 357889999999999999999999999 899999999999998776688877
Q ss_pred HH
Q 003371 811 VL 812 (825)
Q Consensus 811 ~i 812 (825)
+|
T Consensus 253 ~i 254 (254)
T PF08282_consen 253 AI 254 (254)
T ss_dssp HH
T ss_pred hC
Confidence 64
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.72 E-value=6e-08 Score=95.63 Aligned_cols=100 Identities=19% Similarity=0.218 Sum_probs=80.8
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEe--cCHHHHH
Q 003371 672 KAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMAR--SSPFDKL 749 (825)
Q Consensus 672 ~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar--~sP~dK~ 749 (825)
.+|+.|+++|+++.++|+.+...+..+.+.+|+... |.. -.|+--.
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~--------------------------------f~~~kpkp~~~~ 88 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF--------------------------------HEGIKKKTEPYA 88 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE--------------------------------EecCCCCHHHHH
Confidence 689999999999999999999999999999999641 211 2344444
Q ss_pred HHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCC
Q 003371 750 LMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDD 804 (825)
Q Consensus 750 ~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~ 804 (825)
.+++.+.-....++++||+.||.+|++.|++++||+ ++.+.+|+.|+.|..+.+
T Consensus 89 ~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~ 142 (169)
T TIGR02726 89 QMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARG 142 (169)
T ss_pred HHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCC
Confidence 444444333456999999999999999999999999 899999999999986443
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.1e-07 Score=98.72 Aligned_cols=148 Identities=21% Similarity=0.254 Sum_probs=99.8
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechh----hh-cCC-------------
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVE----FR-NYT------------- 726 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~----~~-~~~------------- 726 (825)
.+.+.++++|+++++.|+.+.++||.+...+..+++++|+..+....++..+..... +. .+.
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 477899999999999999999999999999999999999543211111111111000 00 000
Q ss_pred -----------------------HHHHHhhccC----eeE-----EEecCH--HHHHHHHHHHHhC-C---CEEEEEcCC
Q 003371 727 -----------------------DEERIQKVDK----IRV-----MARSSP--FDKLLMVQCLKKK-G---HVVAVTGDG 768 (825)
Q Consensus 727 -----------------------~~~~~~~~~~----~~V-----~ar~sP--~dK~~lV~~Lq~~-g---~vVa~~GDG 768 (825)
.+........ ..+ +....| .+|..-++.+.++ | +.|+++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0111111111 111 112222 3687777777654 3 468999999
Q ss_pred ccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchH----HHHHHH
Q 003371 769 TNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTS----VATVLS 813 (825)
Q Consensus 769 ~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~s----Iv~~i~ 813 (825)
.||.+||+.|++|+||| ++.+.+|+.||.|..+++-.. |..+++
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999 899999999999988777777 666654
|
catalyze the same reaction as SPP. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.5e-07 Score=96.47 Aligned_cols=117 Identities=24% Similarity=0.327 Sum_probs=87.8
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCccccccc---ccceeeechhhhcCCHHHHHhhccCeeEE
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQV---EKGEVVEGVEFRNYTDEERIQKVDKIRVM 740 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~---~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ 740 (825)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|+...-... ..+ +++|. |.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG-~ltG~------------------v~ 136 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG-KLTGR------------------VV 136 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC-EEece------------------ee
Confidence 789999999999999999999999999999999999999997532210 011 23333 44
Q ss_pred Eec-CHHHHHHHHHHHHh-CCC---EEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeec
Q 003371 741 ARS-SPFDKLLMVQCLKK-KGH---VVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVIL 801 (825)
Q Consensus 741 ar~-sP~dK~~lV~~Lq~-~g~---vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivll 801 (825)
... ..+.|...++.+.+ .|. .+.++|||.||.|||+.|+.+++.+ +....+..|+..+-
T Consensus 137 g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~~ 200 (212)
T COG0560 137 GPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRIW 200 (212)
T ss_pred eeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhcC
Confidence 443 34788888866655 354 4888999999999999999999996 34444555555443
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.7e-07 Score=91.50 Aligned_cols=106 Identities=19% Similarity=0.275 Sum_probs=82.8
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHH
Q 003371 673 AVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMV 752 (825)
Q Consensus 673 aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV 752 (825)
+|+.|++.|+++.++||+....+..+.++.|+... +... ..|...+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~--------------------------------~~~~--~~k~~~~ 81 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL--------------------------------YQGQ--SNKLIAF 81 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE--------------------------------Eecc--cchHHHH
Confidence 99999999999999999999999999999998641 1111 2344444
Q ss_pred HHHHh----CCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCC----chHHHHHHH
Q 003371 753 QCLKK----KGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDD----FTSVATVLS 813 (825)
Q Consensus 753 ~~Lq~----~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~----f~sIv~~i~ 813 (825)
+.+.+ ..+.+.|+||+.||.+|++.|+++++|. .+.+..+..||.++..+. |.-+...+.
T Consensus 82 ~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~~~g~~~~~~~~~~ 149 (154)
T TIGR01670 82 SDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCELLL 149 (154)
T ss_pred HHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCCCCcHHHHHHHHHH
Confidence 44432 2357999999999999999999999998 778889999999997443 555555443
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.60 E-value=3e-07 Score=107.22 Aligned_cols=52 Identities=29% Similarity=0.495 Sum_probs=48.7
Q ss_pred EEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 761 VVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 761 vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
-|+++|||.||.+||+.|+.|+||| +|.+.+|+.||+|..+++=.+|..+|+
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 4889999999999999999999999 899999999999998888888988886
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=4.5e-07 Score=97.06 Aligned_cols=66 Identities=29% Similarity=0.398 Sum_probs=54.5
Q ss_pred HHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 747 DKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 747 dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
+|..-++.+.++ | +-|+++||+.||.+|++.|++|+||| ++.+..|+.||.|..+++=.+|..+++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 355555554433 3 35889999999999999999999999 788888999999998888888988885
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.54 E-value=5.1e-07 Score=95.85 Aligned_cols=64 Identities=31% Similarity=0.328 Sum_probs=53.8
Q ss_pred HHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHH
Q 003371 747 DKLLMVQCLKKK----GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATV 811 (825)
Q Consensus 747 dK~~lV~~Lq~~----g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~ 811 (825)
.|..-++.+.+. .+.++++||+.||.+||+.|+.|+||| ++.+.+|+.||++..+++-..|..+
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhhh
Confidence 577777777654 246899999999999999999999999 8899999999999988777766654
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=7.3e-07 Score=91.20 Aligned_cols=127 Identities=19% Similarity=0.208 Sum_probs=92.4
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEE--e
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMA--R 742 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~a--r 742 (825)
++.||+++.++.|+++ +++.++|+-....+..+.+++||..... ......+.. .+.. -
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~---~~~~~~~~~----------------~i~~~~~ 127 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFC---HSLEVDEDG----------------MITGYDL 127 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhc---ceEEECCCC----------------eEECccc
Confidence 4689999999999999 9999999999999999999999853110 000110000 0000 1
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 743 SSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 743 ~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
..|..|...++.++..+..+.|+|||.||.+|.+.|++|+..+ .+.++....++..+. +++..+...+.
T Consensus 128 ~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~-~~~~el~~~l~ 196 (205)
T PRK13582 128 RQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAV-HTYDELLAAID 196 (205)
T ss_pred cccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCccccc-CCHHHHHHHHH
Confidence 2477888889999888889999999999999999999999987 344444455666332 36777766653
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=4.9e-07 Score=90.90 Aligned_cols=111 Identities=20% Similarity=0.259 Sum_probs=85.9
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHH
Q 003371 672 KAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLM 751 (825)
Q Consensus 672 ~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~l 751 (825)
.+|+.|+++|+++.++||.....+..+++++|+.. +|. ...+|...
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~--------------------------------~f~--g~~~k~~~ 100 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH--------------------------------LYQ--GQSNKLIA 100 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce--------------------------------eec--CCCcHHHH
Confidence 69999999999999999999999999999999854 122 12345555
Q ss_pred HHHHH-hCC---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeecc----CCchHHHHHHHHhHH
Q 003371 752 VQCLK-KKG---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILD----DDFTSVATVLSPGDQ 817 (825)
Q Consensus 752 V~~Lq-~~g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlld----d~f~sIv~~i~~gR~ 817 (825)
++.+. +.| ..|+|+||+.||.+|++.|+++++++ .+.+..+..||+++-. ..+..+.+.+...|-
T Consensus 101 l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~ 173 (183)
T PRK09484 101 FSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQG 173 (183)
T ss_pred HHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhcC
Confidence 55443 333 46999999999999999999999998 7888899999999863 234556666654443
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.48 E-value=5.2e-07 Score=91.78 Aligned_cols=117 Identities=20% Similarity=0.177 Sum_probs=82.9
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
+++|++.+.++.|++.|+++.++|+-....+..+++.+|+..-. ...+...+-.... +. .+-...
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~-----~~~~~~~~~g~~~--------p~--~~~~~~ 144 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVY-----SNELVFDEKGFIQ--------PD--GIVRVT 144 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEE-----EEEEEEcCCCeEe--------cc--eeeEEc
Confidence 68999999999999999999999999999999999999975310 0111110000000 11 112234
Q ss_pred HHHHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcC
Q 003371 745 PFDKLLMVQCLKKK----GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSD 797 (825)
Q Consensus 745 P~dK~~lV~~Lq~~----g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaD 797 (825)
|..|...++.+.++ .+.+.++||+.||.+|++.|+++++++ .+....+.++|
T Consensus 145 ~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 145 FDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred cccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 56687777766543 235899999999999999999999998 44555666665
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.9e-06 Score=91.51 Aligned_cols=147 Identities=16% Similarity=0.084 Sum_probs=93.7
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechh--------h--hcCCHHH------
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVE--------F--RNYTDEE------ 729 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~--------~--~~~~~~~------ 729 (825)
.-+.++++|+.++++|+++.++||.....+..+.+++|+.......+++.+..... + ..++.+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 44568999999999999999999999999999999999853211112222222110 0 0011000
Q ss_pred -----------------------------------------------------HHhhccC--eeE-----EEecC--HHH
Q 003371 730 -----------------------------------------------------RIQKVDK--IRV-----MARSS--PFD 747 (825)
Q Consensus 730 -----------------------------------------------------~~~~~~~--~~V-----~ar~s--P~d 747 (825)
+.+.+.+ +.+ +-... -..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 0000000 110 00011 124
Q ss_pred HHHHHHHHHhC------CCEEEEEcCCccCHHHhhhCCccEecCCCch---HHHHHh--c-CeeeccCCchHHHHHHH
Q 003371 748 KLLMVQCLKKK------GHVVAVTGDGTNDAPALKEADVGLSMGIQGT---EVAKES--S-DIVILDDDFTSVATVLS 813 (825)
Q Consensus 748 K~~lV~~Lq~~------g~vVa~~GDG~NDapALk~AdVGiamg~~gt---~vAk~a--a-Divlldd~f~sIv~~i~ 813 (825)
|..-++.|.+. .+.|.++||+.||.+||+.|++|+||| ++. +..|+. | ++|-.+++=..|..+++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 55555555433 345999999999999999999999999 676 467876 4 57777888888888875
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.35 E-value=2.6e-06 Score=87.87 Aligned_cols=139 Identities=15% Similarity=0.032 Sum_probs=91.0
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEE--E
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVM--A 741 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~--a 741 (825)
-+++||+++.++.|++.|+++.++||.....+..+.+.++..... ......++|..+.... |.-..+ .
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i--~~n~~~~~~~~~~~~~--------p~~~~~~~~ 138 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRI--YCNEADFSNEYIHIDW--------PHPCDGTCQ 138 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccE--EeceeEeeCCeeEEeC--------CCCCccccc
Confidence 578999999999999999999999999999999999887543210 0011233333222110 100010 0
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 742 RSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 742 r~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
......|..+++.++...+.+.|+|||.||.+|++.||+.+|=+ .-.+-.++.---...=++|..|...++
T Consensus 139 ~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~~~f~di~~~l~ 209 (214)
T TIGR03333 139 NQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPFQDFYDVRKELE 209 (214)
T ss_pred cCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCcCCHHHHHHHHH
Confidence 11135799999999887788899999999999999999988754 211212211111222257888887774
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.1e-05 Score=86.44 Aligned_cols=148 Identities=11% Similarity=0.019 Sum_probs=92.0
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcc-cccccccceeeechh--------h-h-cCCHHH-----
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILR-LDQQVEKGEVVEGVE--------F-R-NYTDEE----- 729 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~-~~~~~~~~~vi~G~~--------~-~-~~~~~~----- 729 (825)
+-+.++++|++|+++|+++++.||.....+..+++++|+.. +-...+++.+..... . . .++.+.
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 104 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQVL 104 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHHH
Confidence 45779999999999999999999999999999999999842 111112222221100 0 0 011100
Q ss_pred --------------------------------------------------------HHhhcc--CeeE-----EEecCH-
Q 003371 730 --------------------------------------------------------RIQKVD--KIRV-----MARSSP- 745 (825)
Q Consensus 730 --------------------------------------------------------~~~~~~--~~~V-----~ar~sP- 745 (825)
+.+.+. .+.+ +-...|
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi~~~ 184 (271)
T PRK03669 105 NTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHVLDA 184 (271)
T ss_pred HHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEEecC
Confidence 000000 0111 011122
Q ss_pred -HHHHHHHHHHHh-------CCCEEEEEcCCccCHHHhhhCCccEecCCCchH---H--HHHhcCeeeccCCchHHHHHH
Q 003371 746 -FDKLLMVQCLKK-------KGHVVAVTGDGTNDAPALKEADVGLSMGIQGTE---V--AKESSDIVILDDDFTSVATVL 812 (825)
Q Consensus 746 -~dK~~lV~~Lq~-------~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~---v--Ak~aaDivlldd~f~sIv~~i 812 (825)
-+|..-++.|.+ ....|+++|||.||.+||+.|++|+|||....+ + .+..+|++.-...-..+..++
T Consensus 185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l 264 (271)
T PRK03669 185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGL 264 (271)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHH
Confidence 245555555543 235689999999999999999999999943312 1 344788888877777888877
Q ss_pred H
Q 003371 813 S 813 (825)
Q Consensus 813 ~ 813 (825)
+
T Consensus 265 ~ 265 (271)
T PRK03669 265 D 265 (271)
T ss_pred H
Confidence 5
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.26 E-value=2.4e-06 Score=86.13 Aligned_cols=92 Identities=21% Similarity=0.260 Sum_probs=70.4
Q ss_pred ccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHH-
Q 003371 668 PGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPF- 746 (825)
Q Consensus 668 ~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~- 746 (825)
|++++.|+.++++|++++++||+....+.++|+.+|+..... .-+.. +.+ ......+|.+|.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v------~~~~~-~~~----------~~~~~~~~~~~~~ 154 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNV------IGNEL-FDN----------GGGIFTGRITGSN 154 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGE------EEEEE-ECT----------TCCEEEEEEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEE------EEEee-eec----------ccceeeeeECCCC
Confidence 888899999999999999999999999999999999975311 00000 100 012245566555
Q ss_pred H--HHHHHHHH------HhCCCEEEEEcCCccCHHHhh
Q 003371 747 D--KLLMVQCL------KKKGHVVAVTGDGTNDAPALK 776 (825)
Q Consensus 747 d--K~~lV~~L------q~~g~vVa~~GDG~NDapALk 776 (825)
+ |...++.+ +.....+.++|||.||.||||
T Consensus 155 ~~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 155 CGGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp ESHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred CCcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 3 99999999 345789999999999999996
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.25 E-value=1e-05 Score=86.77 Aligned_cols=149 Identities=16% Similarity=0.094 Sum_probs=95.8
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechh----------------hh--cC
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVE----------------FR--NY 725 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~----------------~~--~~ 725 (825)
..+.++++++|+.|++.|+++.++||.....+..+++++|+..+....++..+..... +. .+
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYFPFQPDGERLKGDYWVIELGP 99 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccccccCCccccccCCceEEEcCC
Confidence 4567889999999999999999999999999999999999864322222232321100 00 00
Q ss_pred CHHHH-------------------------------------Hh----hccC----------------------eeE---
Q 003371 726 TDEER-------------------------------------IQ----KVDK----------------------IRV--- 739 (825)
Q Consensus 726 ~~~~~-------------------------------------~~----~~~~----------------------~~V--- 739 (825)
+.+.. .. .+.. +.+
T Consensus 100 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 179 (273)
T PRK00192 100 PYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLWNGSEAAKERFEEALKRLGLKVTRG 179 (273)
T ss_pred CHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceeecCchHHHHHHHHHHHHcCCEEEEC
Confidence 00000 00 0000 000
Q ss_pred --EEecC-HHHHHHHHHHHHhC----C-CEEEEEcCCccCHHHhhhCCccEecCCCchHHHH----Hhc-Ceee--ccCC
Q 003371 740 --MARSS-PFDKLLMVQCLKKK----G-HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAK----ESS-DIVI--LDDD 804 (825)
Q Consensus 740 --~ar~s-P~dK~~lV~~Lq~~----g-~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk----~aa-Divl--ldd~ 804 (825)
+-... +.+|..-++.|.+. . +.|+++||+.||.+|++.|++|++|+ +|.+..| .+| +.|. ...+
T Consensus 180 ~~~~ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~ 258 (273)
T PRK00192 180 GRFLHLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPG 258 (273)
T ss_pred CeEEEEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCC
Confidence 00111 11565556555532 4 78999999999999999999999999 8999889 666 6776 3445
Q ss_pred chHHHHHHH
Q 003371 805 FTSVATVLS 813 (825)
Q Consensus 805 f~sIv~~i~ 813 (825)
=..+..+++
T Consensus 259 ~~Gv~~~l~ 267 (273)
T PRK00192 259 PEGWAEAIN 267 (273)
T ss_pred cHHHHHHHH
Confidence 667777764
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.3e-05 Score=83.14 Aligned_cols=128 Identities=24% Similarity=0.315 Sum_probs=84.9
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCccccccccccee------eechhhhcCCHHHHHhhccCee
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEV------VEGVEFRNYTDEERIQKVDKIR 738 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~v------i~G~~~~~~~~~~~~~~~~~~~ 738 (825)
+++||+++.++.|++.|+++.++||.....+..+++.+|+...... ...+. +.|.....
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~-~~~~~~~~~g~~~g~~~~~-------------- 148 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIF-ANQILFGDSGEYAGFDENE-------------- 148 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEE-EeEEEEcCCCcEECccCCC--------------
Confidence 4789999999999999999999999999999999999999631100 00000 11110000
Q ss_pred EEEecCHHHHHHHHHHHHhC-C-CEEEEEcCCccCHHHhhh--CCccEecCCCc-hHHHHHhcCeeeccCCchHHHHH
Q 003371 739 VMARSSPFDKLLMVQCLKKK-G-HVVAVTGDGTNDAPALKE--ADVGLSMGIQG-TEVAKESSDIVILDDDFTSVATV 811 (825)
Q Consensus 739 V~ar~sP~dK~~lV~~Lq~~-g-~vVa~~GDG~NDapALk~--AdVGiamg~~g-t~vAk~aaDivlldd~f~sIv~~ 811 (825)
.. ..+..|...++.+.++ | +.+.|+||+.||..|.+. ++++++.|... .+.....+|.++- ++..+...
T Consensus 149 ~~--~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~~ 222 (224)
T PLN02954 149 PT--SRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIEV 222 (224)
T ss_pred cc--cCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHHh
Confidence 00 1123476777766654 2 568899999999999888 57777666322 2334456899885 67666554
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.14 E-value=3.7e-06 Score=81.60 Aligned_cols=110 Identities=20% Similarity=0.282 Sum_probs=77.9
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
.+-||+++.++.|++.|.+|.++||--..-+..+|.++||...+..- ..+.-...-++.. ++...-.+|
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yA---N~l~fd~~Gk~~g------fd~~~ptsd-- 156 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYA---NELLFDKDGKYLG------FDTNEPTSD-- 156 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhh---heeeeccCCcccc------cccCCcccc--
Confidence 35699999999999999999999999999999999999998643321 1110000000000 000001122
Q ss_pred HHHHHHHHHHHHhC--CCEEEEEcCCccCHHHhhhCCccEecC
Q 003371 745 PFDKLLMVQCLKKK--GHVVAVTGDGTNDAPALKEADVGLSMG 785 (825)
Q Consensus 745 P~dK~~lV~~Lq~~--g~vVa~~GDG~NDapALk~AdVGiamg 785 (825)
..-|...++.|++. -..++|+|||.||.+|+..||-=|+.|
T Consensus 157 sggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 157 SGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred CCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 24789999999885 467899999999999999988777665
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.10 E-value=9.9e-06 Score=81.33 Aligned_cols=113 Identities=17% Similarity=0.174 Sum_probs=77.9
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccC-eeEEEe
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDK-IRVMAR 742 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~-~~V~ar 742 (825)
-+++|++.+.++.|++.|+++.++|+.+......+.+..|+.... ..++..+..-+ . +.+....+. ..++..
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-----~~i~~~~~~~~-~-~g~~~~~~~~~~~~~~ 143 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF-----IEIYSNPASFD-N-DGRHIVWPHHCHGCCS 143 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe-----eEEeccCceEC-C-CCcEEEecCCCCccCc
Confidence 478999999999999999999999999999999999999986421 11221111000 0 000000000 001111
Q ss_pred -cCHHHHHHHHHHHHhC-CCEEEEEcCCccCHHHhhhCCccEe
Q 003371 743 -SSPFDKLLMVQCLKKK-GHVVAVTGDGTNDAPALKEADVGLS 783 (825)
Q Consensus 743 -~sP~dK~~lV~~Lq~~-g~vVa~~GDG~NDapALk~AdVGia 783 (825)
.....|..+++.++++ ...+.++|||.||..|.++||+-+|
T Consensus 144 ~~~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 144 CPCGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 1123599999999887 8889999999999999999998775
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.09 E-value=7.1e-06 Score=81.64 Aligned_cols=97 Identities=22% Similarity=0.301 Sum_probs=70.7
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCccccccc----ccceeeechhhhcCCHHHHHhhccCeeEE
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQV----EKGEVVEGVEFRNYTDEERIQKVDKIRVM 740 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~----~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ 740 (825)
+++|++++.++.|++.|+++.++||.....+..+++.+|+..-.... ..+ .+.|+... +
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g-~~~g~~~~------------~---- 135 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNG-LLTGPIEG------------Q---- 135 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCC-EEeCccCC------------c----
Confidence 36899999999999999999999999999999999999986311000 000 11121000 0
Q ss_pred EecCHHHHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhC
Q 003371 741 ARSSPFDKLLMVQCLKKK----GHVVAVTGDGTNDAPALKEA 778 (825)
Q Consensus 741 ar~sP~dK~~lV~~Lq~~----g~vVa~~GDG~NDapALk~A 778 (825)
....+..|...++.+++. .+.+.++|||.||.+|++.|
T Consensus 136 ~~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 136 VNPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred ccCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 124567899999887654 34689999999999999876
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.6e-05 Score=82.35 Aligned_cols=135 Identities=17% Similarity=0.120 Sum_probs=86.6
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEE---E
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVM---A 741 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~---a 741 (825)
+++||+.+.++.|++.|+++.++||-....+..+.+.+ +.... .......++|..+..-. |.-... .
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~-i~~n~~~~~~~~~~~~k--------p~p~~~~~~~ 143 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQ-IYCNGSDFSGEYITITW--------PHPCDEHCQN 143 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCc-EEEeEEEecCCeeEEec--------cCCccccccc
Confidence 68999999999999999999999999999999999998 64310 00001122332221000 000000 0
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHh--cCeeeccCCchHHHHHHH
Q 003371 742 RSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKES--SDIVILDDDFTSVATVLS 813 (825)
Q Consensus 742 r~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~a--aDivlldd~f~sIv~~i~ 813 (825)
++ ...|..+++.++.....+.|+|||.||.+|.+.||+.++-+ .-.+.+++. +.+.+ ++|..|...++
T Consensus 144 ~~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~-~l~~~~~~~~~~~~~~--~~f~ei~~~l~ 213 (219)
T PRK09552 144 HC-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARD-FLITKCEELGIPYTPF--ETFHDVQTELK 213 (219)
T ss_pred cC-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHH-HHHHHHHHcCCCcccc--CCHHHHHHHHH
Confidence 01 13488888888777778899999999999999999977632 111222221 33332 57888877763
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=2.6e-05 Score=80.83 Aligned_cols=126 Identities=24% Similarity=0.355 Sum_probs=89.1
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
-++.||+.++++.|++.|+++.++||.....+..+.+..|+.... ..++.+... .+.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~------------------~~~ 148 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF-----SVVIGGDSL------------------PNK 148 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc-----cEEEcCCCC------------------CCC
Confidence 457899999999999999999999999999999999999985421 122222211 112
Q ss_pred C--HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc-cEe--cCCC-chHHHHHhcCeeeccCCchHHHHHHHH
Q 003371 744 S--PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADV-GLS--MGIQ-GTEVAKESSDIVILDDDFTSVATVLSP 814 (825)
Q Consensus 744 s--P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdV-Gia--mg~~-gt~vAk~aaDivlldd~f~sIv~~i~~ 814 (825)
. |+--..+.+.++-....+.++||+.||..|.+.|++ +|. .|.. ..+.....+|.++ +++..+..++..
T Consensus 149 kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 149 KPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred CcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 2 222233444444445678899999999999999988 444 3322 3455556788887 589999988764
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.00 E-value=2.4e-05 Score=79.81 Aligned_cols=106 Identities=15% Similarity=0.110 Sum_probs=77.3
Q ss_pred cCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccc-cc--cceeeechhhhcCCHHHHHhhccCeeE
Q 003371 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQ-VE--KGEVVEGVEFRNYTDEERIQKVDKIRV 739 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~-~~--~~~vi~G~~~~~~~~~~~~~~~~~~~V 739 (825)
..+++|++.+.++.+++.|+++.++||-....+..+++.+|+..--.. .. ..-..+|+..
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~----------------- 147 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNID----------------- 147 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCcc-----------------
Confidence 457899999999999999999999999999999999999998542110 00 0001111100
Q ss_pred EEecCHHHHHHHHHHHHh-CC---CEEEEEcCCccCHHHhhhCCccEecC
Q 003371 740 MARSSPFDKLLMVQCLKK-KG---HVVAVTGDGTNDAPALKEADVGLSMG 785 (825)
Q Consensus 740 ~ar~sP~dK~~lV~~Lq~-~g---~vVa~~GDG~NDapALk~AdVGiamg 785 (825)
--.+.+..|...++.+.+ .+ +.+.++||+.+|.|+++.|+.++++.
T Consensus 148 ~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 148 GNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred CCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 012345788887776654 33 25788999999999999999999886
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.98 E-value=8.7e-05 Score=77.78 Aligned_cols=66 Identities=18% Similarity=0.261 Sum_probs=53.1
Q ss_pred HHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcC----eeeccCCchHHHHHHH
Q 003371 747 DKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSD----IVILDDDFTSVATVLS 813 (825)
Q Consensus 747 dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaD----ivlldd~f~sIv~~i~ 813 (825)
.|...++.|.++ | ..|+++||+.||.+||+.|++|++|+ ++.+..|+.|| +|.-.++=..+.++|.
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 677777777654 3 24788999999999999999999999 78888999999 6655556667777774
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.92 E-value=2.2e-05 Score=73.96 Aligned_cols=113 Identities=20% Similarity=0.300 Sum_probs=90.3
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHH
Q 003371 672 KAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLM 751 (825)
Q Consensus 672 ~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~l 751 (825)
..|+.+.++||+|-++||.+...++.=|+++||-. ++- --.+|...
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~--------------------------------~~q--G~~dK~~a 87 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH--------------------------------LYQ--GISDKLAA 87 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce--------------------------------eee--chHhHHHH
Confidence 68999999999999999999999999999999964 221 23688888
Q ss_pred HHHHHhC----CCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccC----CchHHHHHHHHhHHhh
Q 003371 752 VQCLKKK----GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDD----DFTSVATVLSPGDQLH 819 (825)
Q Consensus 752 V~~Lq~~----g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd----~f~sIv~~i~~gR~i~ 819 (825)
.+.|.++ -+-||++||..||-|+|+...+++|.. .+..-.++.||+|+-.. -+.-+..+|..++.-+
T Consensus 88 ~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~ 162 (170)
T COG1778 88 FEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKL 162 (170)
T ss_pred HHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcH
Confidence 8777665 356999999999999999999999997 78888888888887644 2455555555555443
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.87 E-value=7.3e-05 Score=77.49 Aligned_cols=128 Identities=24% Similarity=0.351 Sum_probs=96.1
Q ss_pred cCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEe
Q 003371 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMAR 742 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar 742 (825)
..++-||++++++.|+++|++..++|+.+...+..+.+..|+..... .++.+..+. ...
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~-----~i~g~~~~~----------------~~K 145 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFD-----VIVGGDDVP----------------PPK 145 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccc-----eEEcCCCCC----------------CCC
Confidence 45678999999999999999999999999999999999999986421 111112111 112
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCC---ccEecCCC-chHHHHHhcCeeeccCCchHHHHHHH
Q 003371 743 SSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEAD---VGLSMGIQ-GTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 743 ~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~Ad---VGiamg~~-gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
-.|.....+.+.+.-..+.+.||||..+|..|=+.|+ ||+..|.. +.......+|.++- ++..+...+.
T Consensus 146 P~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~--~~~el~~~l~ 218 (220)
T COG0546 146 PDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVID--SLAELLALLA 218 (220)
T ss_pred cCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEEC--CHHHHHHHHh
Confidence 2455555555555544347999999999999999998 88988853 56777788999987 7777776653
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.81 E-value=5.6e-05 Score=70.77 Aligned_cols=113 Identities=19% Similarity=0.170 Sum_probs=75.7
Q ss_pred cccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEE
Q 003371 661 GIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVM 740 (825)
Q Consensus 661 ~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ 740 (825)
....++++++++.+++|++.|++++++||.....+....+++|+..... .++......................+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~~~~~~~~~~~~~~ 94 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFD-----PVITSNGAAIYYPKEGLFLGGGPFDI 94 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhh-----heeccchhhhhccccccccccccccc
Confidence 4456899999999999999999999999999999999999999843211 11111100000000000001111234
Q ss_pred EecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhC
Q 003371 741 ARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEA 778 (825)
Q Consensus 741 ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~A 778 (825)
.+-.|..+..+.+.+......+.++||+.||..|++.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~ 132 (139)
T cd01427 95 GKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAA 132 (139)
T ss_pred CCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHc
Confidence 45667677777777665567799999999999999984
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PF12515 CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory domain; InterPro: IPR024750 This entry represents the N-terminal autoinhibitory calmodulin-binding domain characteristic of certain calcium-transporting ATPases [] | Back alignment and domain information |
|---|
Probab=97.76 E-value=1.1e-05 Score=59.82 Aligned_cols=27 Identities=22% Similarity=0.257 Sum_probs=25.4
Q ss_pred cchHHHHhHHHhh-hhhccchhhhhccc
Q 003371 22 TLTKAQKRWRLAY-WTIYSFRAMLSVLP 48 (825)
Q Consensus 22 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 48 (825)
+++++++|||+|+ +|+|++||||++++
T Consensus 13 ~s~e~l~rWR~a~~lv~N~~RRFR~~~d 40 (47)
T PF12515_consen 13 SSEEALRRWRQAVGLVKNARRRFRYTAD 40 (47)
T ss_pred CCHHHHHHHHHHhHHhccccceeeeccc
Confidence 6799999999999 99999999999986
|
This domain binds calmodulin in a calcium-dependent fashion and has a conserved RRFR sequence motif. There are two completely conserved residues (F and W) that may be functionally important.; GO: 0005516 calmodulin binding |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00017 Score=75.00 Aligned_cols=44 Identities=14% Similarity=0.126 Sum_probs=39.4
Q ss_pred cCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcc
Q 003371 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILR 706 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~ 706 (825)
.+..-++++++|++|+++|+.++++||.....+..+.+++|+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 35566789999999999999999999999999999999999843
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00018 Score=73.56 Aligned_cols=126 Identities=18% Similarity=0.228 Sum_probs=85.1
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.+.++.|++.|+++.++|+.....+..+-+..|+.... ..++...++. ..+-.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f-----~~i~~~~~~~----------------~~KP~ 133 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF-----DHVIGSDEVP----------------RPKPA 133 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe-----eeEEecCcCC----------------CCCCC
Confidence 67899999999999999999999999999999999999986421 1111111110 11112
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEe---cCC-CchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLS---MGI-QGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGia---mg~-~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
|+-=..+++.++-..+.++|+||+.+|..+-++|++... -|. +..+..++.+|+++- ++..+..+++
T Consensus 134 ~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~--~~~~l~~~~~ 204 (205)
T TIGR01454 134 PDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLR--KPQSLLALCR 204 (205)
T ss_pred hHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeC--CHHHHHHHhh
Confidence 222223333333234669999999999999999988643 331 233456778999874 6777766553
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00035 Score=73.83 Aligned_cols=150 Identities=15% Similarity=0.122 Sum_probs=95.1
Q ss_pred cCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccc--cccccceeeechhh------------------
Q 003371 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLD--QQVEKGEVVEGVEF------------------ 722 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~--~~~~~~~vi~G~~~------------------ 722 (825)
..+..|...++++++++.|+.++.+||......+.+.+++++..+. ...++..+..+...
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 3567799999999999999999999999999999999999986542 11122222211100
Q ss_pred --------hcC-----------------CHHH-------HHhhcc----CeeEEE------ecCH--HHHHHHHHHHHhC
Q 003371 723 --------RNY-----------------TDEE-------RIQKVD----KIRVMA------RSSP--FDKLLMVQCLKKK 758 (825)
Q Consensus 723 --------~~~-----------------~~~~-------~~~~~~----~~~V~a------r~sP--~dK~~lV~~Lq~~ 758 (825)
..+ ..+. +.+.+. ++.+.. ...| ..|..-++.|.++
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 000 0000 111111 111111 1233 3688888887664
Q ss_pred ----CCEEEEEcCCccCHHHhhh-CCccEecCCCchHHHHHhcC-------eeeccCCchHHHHHHH
Q 003371 759 ----GHVVAVTGDGTNDAPALKE-ADVGLSMGIQGTEVAKESSD-------IVILDDDFTSVATVLS 813 (825)
Q Consensus 759 ----g~vVa~~GDG~NDapALk~-AdVGiamg~~gt~vAk~aaD-------ivlldd~f~sIv~~i~ 813 (825)
...|+++||+.||.+||+. ++.|++|+ ++.+..|+.++ ++--.-.-+.|.++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3568999999999999998 77999999 78887776543 3222223455665553
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0004 Score=71.88 Aligned_cols=39 Identities=13% Similarity=0.165 Sum_probs=36.1
Q ss_pred cccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 003371 667 RPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGIL 705 (825)
Q Consensus 667 R~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~ 705 (825)
-+.++++|+.++++|+.+.++||.....+..+.+++|+.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 344899999999999999999999999999999999975
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00042 Score=79.68 Aligned_cols=101 Identities=19% Similarity=0.205 Sum_probs=75.2
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
|++|++.+.+++++++|+++.++|+-+...+..+++..|+.+. ++.+++ ..++.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~--------Vigsd~------------------~~~~k 125 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG--------VFASDG------------------TTNLK 125 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE--------EEeCCC------------------ccccC
Confidence 5789999999999999999999999999999999999998321 222211 11355
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAK 793 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk 793 (825)
|+.|...++.....+. ..++||..||.|+++.|+-.++++ .+..+++
T Consensus 126 g~~K~~~l~~~l~~~~-~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~l~~ 172 (479)
T PRK08238 126 GAAKAAALVEAFGERG-FDYAGNSAADLPVWAAARRAIVVG-ASPGVAR 172 (479)
T ss_pred CchHHHHHHHHhCccC-eeEecCCHHHHHHHHhCCCeEEEC-CCHHHHH
Confidence 6667654442222222 567899999999999999999998 4544433
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00053 Score=73.47 Aligned_cols=127 Identities=24% Similarity=0.293 Sum_probs=82.9
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
.++.|++.++++.|++.|+++.++|+-+...+..+..+.|+.... ..++.+.+.. ...-
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f-----~~i~~~d~~~----------------~~Kp 158 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF-----RWIIGGDTLP----------------QKKP 158 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC-----eEEEecCCCC----------------CCCC
Confidence 478899999999999999999999999999999999998885421 1122221110 0011
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc---EecCC-CchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 744 SPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVG---LSMGI-QGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVG---iamg~-~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
.|+-=..+.+.+.-..+.+.|+||+.||..|.+.|++- +..|. ...+..+..+|.++. ++..+..++.
T Consensus 159 ~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~~~ 230 (272)
T PRK13223 159 DPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPGCA 230 (272)
T ss_pred CcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHHHh
Confidence 11111222222222245688999999999999999973 33332 122344567898873 7888876644
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00074 Score=69.54 Aligned_cols=125 Identities=17% Similarity=0.191 Sum_probs=84.0
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.++++.|+++|+++.++|+.....+..+-+..|+.... ..++.+.+.. .....
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f-----~~i~~~~~~~----------------~~Kp~ 140 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF-----DVVITLDDVE----------------HAKPD 140 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce-----eEEEecCcCC----------------CCCCC
Confidence 36799999999999999999999999999999999999986521 1122222111 01122
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc---cEecCCCch-HHHHHhcCeeeccCCchHHHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADV---GLSMGIQGT-EVAKESSDIVILDDDFTSVATVL 812 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdV---Giamg~~gt-~vAk~aaDivlldd~f~sIv~~i 812 (825)
|+-=..+.+.+.-....+.|+||+.+|..|-++|++ |+.-|.... +.....+|.++- ++..+..++
T Consensus 141 p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 141 PEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred cHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHHHH
Confidence 332233333333334568899999999999999998 444442222 244456888765 788887765
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0016 Score=73.86 Aligned_cols=147 Identities=19% Similarity=0.180 Sum_probs=92.1
Q ss_pred CcccHHHHH-HHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccc--cccceeeechhh--------------------
Q 003371 666 CRPGVQKAV-EACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQ--VEKGEVVEGVEF-------------------- 722 (825)
Q Consensus 666 lR~~v~~aI-~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~--~~~~~vi~G~~~-------------------- 722 (825)
+.+....++ +++++.|+..+..||..+..+..+.++.++..+... .++..+..+..+
T Consensus 29 ~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~ 108 (413)
T PLN02382 29 LSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVV 108 (413)
T ss_pred hhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHH
Confidence 333445555 889999999999999999999999999998876310 011111111100
Q ss_pred ---hcC--------------------CH-------HHHHhhcc----CeeE------EEecCHH--HHHHHHHHHHhC--
Q 003371 723 ---RNY--------------------TD-------EERIQKVD----KIRV------MARSSPF--DKLLMVQCLKKK-- 758 (825)
Q Consensus 723 ---~~~--------------------~~-------~~~~~~~~----~~~V------~ar~sP~--dK~~lV~~Lq~~-- 758 (825)
..+ .+ +++.+.+. .+.+ +-...|. .|..-++.|.++
T Consensus 109 ~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~ 188 (413)
T PLN02382 109 EETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLK 188 (413)
T ss_pred HHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhh
Confidence 000 00 01111111 1121 1223333 588888877664
Q ss_pred --C---CEEEEEcCCccCHHHhhhCC-ccEecCCCchHHHHHhc--------Ceeec-cCCchHHHHHHH
Q 003371 759 --G---HVVAVTGDGTNDAPALKEAD-VGLSMGIQGTEVAKESS--------DIVIL-DDDFTSVATVLS 813 (825)
Q Consensus 759 --g---~vVa~~GDG~NDapALk~Ad-VGiamg~~gt~vAk~aa--------Divll-dd~f~sIv~~i~ 813 (825)
| ..|.++||+.||.+||+.|+ .||+|| ++.+..|+.+ +++.. +.+-..|..+++
T Consensus 189 ~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~ 257 (413)
T PLN02382 189 AEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIG 257 (413)
T ss_pred hcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHH
Confidence 2 46889999999999999999 699999 7888888643 55544 335566777774
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00099 Score=70.58 Aligned_cols=42 Identities=5% Similarity=0.055 Sum_probs=38.5
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcc
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILR 706 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~ 706 (825)
..-+.++++|++|+++||.|++.||-.......+.+++|+..
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 455779999999999999999999999999999999999864
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00088 Score=68.72 Aligned_cols=120 Identities=15% Similarity=0.249 Sum_probs=80.4
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.++++.|++.|+++.++|+-+...+..+.+..|+.... ..++.+.+. .+..
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~------------------~~~K 141 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF-----SVLIGGDSL------------------AQRK 141 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC-----cEEEecCCC------------------CCCC
Confidence 57899999999999999999999999999999999999986421 112221111 1122
Q ss_pred HHHHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCccEec---CCCc-hHHHHHhcCeeeccCCchHHHH
Q 003371 745 PFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVGLSM---GIQG-TEVAKESSDIVILDDDFTSVAT 810 (825)
Q Consensus 745 P~dK~~lV~~Lq~~---g~vVa~~GDG~NDapALk~AdVGiam---g~~g-t~vAk~aaDivlldd~f~sIv~ 810 (825)
|. ...+.+.+++. .+.+.|+||..+|..|.++|++-... |-.. .+.....+|.++- ++..+..
T Consensus 142 p~-p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~--~~~~l~~ 211 (213)
T TIGR01449 142 PH-PDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYD--SLNELPP 211 (213)
T ss_pred CC-hHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeC--CHHHHHh
Confidence 31 12333334433 35688999999999999999986542 2111 2333456888774 5666544
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0015 Score=76.68 Aligned_cols=40 Identities=10% Similarity=0.089 Sum_probs=36.3
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGIL 705 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~ 705 (825)
.-+.++++|+.++++|+.+++.||.....+..+++++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 3356899999999999999999999999999999999974
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0013 Score=68.09 Aligned_cols=121 Identities=18% Similarity=0.273 Sum_probs=81.7
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
-++.||+.++++.|++.|+++.++|+........+.++.||.... ..++.+.++. ..
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~------------------~~ 147 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF-----DALASAEKLP------------------YS 147 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc-----cEEEEcccCC------------------CC
Confidence 467899999999999999999999999999999999999986532 1222222111 11
Q ss_pred CHHHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEecCCCc---hHHHHHhcCeeeccCCchHHHH
Q 003371 744 SPFDKLLMVQCLKKKG---HVVAVTGDGTNDAPALKEADVGLSMGIQG---TEVAKESSDIVILDDDFTSVAT 810 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~g---~vVa~~GDG~NDapALk~AdVGiamg~~g---t~vAk~aaDivlldd~f~sIv~ 810 (825)
.|.-. -+...+++.| +.+.|+||..||..|.+.|++....=..+ .+.-...+|+++. +|..+..
T Consensus 148 Kp~~~-~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~--~~~dl~~ 217 (222)
T PRK10826 148 KPHPE-VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLE--SLTELTA 217 (222)
T ss_pred CCCHH-HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheecc--CHHHHhh
Confidence 22221 3344444443 45889999999999999999765432122 2222345788775 6776654
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.003 Score=67.00 Aligned_cols=132 Identities=17% Similarity=0.251 Sum_probs=84.4
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCccccccc-------ccceeeechhhhcCCHHHHHhhccC
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQV-------EKGEVVEGVEFRNYTDEERIQKVDK 736 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~-------~~~~vi~G~~~~~~~~~~~~~~~~~ 736 (825)
-++|||+.+.++.|++.|+++.++||-....+..+.++.|+..++... ...-++.|.. . |-
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~--~----------P~ 187 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFK--G----------PL 187 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCC--C----------Cc
Confidence 578999999999999999999999999999999999999986443221 0011222210 0 00
Q ss_pred eeEEEecCHHHHHHHHHH-----HH--hCCCEEEEEcCCccCHHHhhhC---CccEecCC--Cc----hHHHHHhcCeee
Q 003371 737 IRVMARSSPFDKLLMVQC-----LK--KKGHVVAVTGDGTNDAPALKEA---DVGLSMGI--QG----TEVAKESSDIVI 800 (825)
Q Consensus 737 ~~V~ar~sP~dK~~lV~~-----Lq--~~g~vVa~~GDG~NDapALk~A---dVGiamg~--~g----t~vAk~aaDivl 800 (825)
+. ...|...+.. ++ .....|.|+|||.||++|..-. .-=|..|- .- -+-=+++-||||
T Consensus 188 --i~----~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl 261 (277)
T TIGR01544 188 --IH----TFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVL 261 (277)
T ss_pred --cc----ccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEE
Confidence 11 1345443331 22 1235688999999999995433 11122221 11 123457899999
Q ss_pred ccCCchHHHHHHH
Q 003371 801 LDDDFTSVATVLS 813 (825)
Q Consensus 801 ldd~f~sIv~~i~ 813 (825)
.+|.=-.++.+|.
T Consensus 262 ~~D~t~~v~~~il 274 (277)
T TIGR01544 262 VQDETLEVANSIL 274 (277)
T ss_pred ECCCCchHHHHHH
Confidence 9998777777653
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.001 Score=70.95 Aligned_cols=140 Identities=12% Similarity=0.223 Sum_probs=84.6
Q ss_pred CCcccHHHHHHHHHh-CCCeEEEEcCCCHHHHHHHHHHcCCc--cccccc----cc------------------------
Q 003371 665 PCRPGVQKAVEACQS-AGVEIKMITGDNVFTAKAIATECGIL--RLDQQV----EK------------------------ 713 (825)
Q Consensus 665 plR~~v~~aI~~l~~-aGI~V~mvTGD~~~tA~aIA~~~GI~--~~~~~~----~~------------------------ 713 (825)
.+-++++++|+.|++ .|+.|.++||.....+..+.+.+++. ..+... ..
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 455899999999998 79999999999999999988877642 111000 00
Q ss_pred ---ceeeech------hhhcCCH--HH---H----HhhccCeeE-----EEecCH--HHHHHHHHHHHhC----CCEEEE
Q 003371 714 ---GEVVEGV------EFRNYTD--EE---R----IQKVDKIRV-----MARSSP--FDKLLMVQCLKKK----GHVVAV 764 (825)
Q Consensus 714 ---~~vi~G~------~~~~~~~--~~---~----~~~~~~~~V-----~ar~sP--~dK~~lV~~Lq~~----g~vVa~ 764 (825)
+..++-+ .++...+ +. + .+..+...+ +-...| .+|..-|+.+.+. ...|.+
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 0001000 0111111 11 1 111121111 112223 3788888776654 356888
Q ss_pred EcCCccCHHHhhhC----CccEecCCCchHHHHHhcCeeeccCCchHHHHH
Q 003371 765 TGDGTNDAPALKEA----DVGLSMGIQGTEVAKESSDIVILDDDFTSVATV 811 (825)
Q Consensus 765 ~GDG~NDapALk~A----dVGiamg~~gt~vAk~aaDivlldd~f~sIv~~ 811 (825)
+||+.||.+|++.+ +.||+|| ++. ..|++.|. +...+...
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~--~~~~v~~~ 239 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLA--GVPDVWSW 239 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCC--CHHHHHHH
Confidence 99999999999999 9999999 443 33677666 44444433
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.003 Score=65.82 Aligned_cols=127 Identities=14% Similarity=0.146 Sum_probs=85.8
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.+.++.|++.|+++.++|+.+...+..+-+..|+.... ..++.+.... ...-.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f-----~~i~~~~~~~----------------~~KP~ 153 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC-----AVLIGGDTLA----------------ERKPH 153 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc-----cEEEecCcCC----------------CCCCC
Confidence 57899999999999999999999999999998888889886421 1222222110 11222
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEe---cCCC-c-hHHHHHhcCeeeccCCchHHHHHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLS---MGIQ-G-TEVAKESSDIVILDDDFTSVATVLSP 814 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGia---mg~~-g-t~vAk~aaDivlldd~f~sIv~~i~~ 814 (825)
|+-=..+.+.+.-..+.+.|+||+.||..|-+.|++-.. -|.. . .+.....+|+++- ++..|...+.|
T Consensus 154 p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~--~~~el~~~~~~ 226 (229)
T PRK13226 154 PLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVE--QPQLLWNPATW 226 (229)
T ss_pred HHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeC--CHHHHHHHhcC
Confidence 322233444444335668999999999999999987642 2321 1 1233456899885 78888877766
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.004 Score=65.76 Aligned_cols=54 Identities=20% Similarity=0.343 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHhCCCEEEEEcC----CccCHHHhhhC-CccEecCCCchHHHHHhcCeee
Q 003371 746 FDKLLMVQCLKKKGHVVAVTGD----GTNDAPALKEA-DVGLSMGIQGTEVAKESSDIVI 800 (825)
Q Consensus 746 ~dK~~lV~~Lq~~g~vVa~~GD----G~NDapALk~A-dVGiamg~~gt~vAk~aaDivl 800 (825)
-+|..-++.|.++.+-|+++|| |-||.+||+.| -.|++++ ++.+..|..+.+++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHhc
Confidence 3688888888777678999999 99999999976 6788887 88998888877654
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0055 Score=63.24 Aligned_cols=122 Identities=24% Similarity=0.352 Sum_probs=82.1
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc--ccccccccceeeechhhhcCCHHHHHhhccCeeEEE
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGIL--RLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMA 741 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~--~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~a 741 (825)
.++.||+++.++.|++.|+++.++|+-....+..+.+..|+. .. ...++.+.+..
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~-----f~~i~~~~~~~------------------ 142 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDD-----VDAVVCPSDVA------------------ 142 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhcc-----CCEEEcCCcCC------------------
Confidence 478999999999999999999999999999999999999986 32 11222222211
Q ss_pred ecCHHHHHHHHHHHHhCC----CEEEEEcCCccCHHHhhhCCccEecC-CCch----HHHHHhcCeeeccCCchHHHHH
Q 003371 742 RSSPFDKLLMVQCLKKKG----HVVAVTGDGTNDAPALKEADVGLSMG-IQGT----EVAKESSDIVILDDDFTSVATV 811 (825)
Q Consensus 742 r~sP~dK~~lV~~Lq~~g----~vVa~~GDG~NDapALk~AdVGiamg-~~gt----~vAk~aaDivlldd~f~sIv~~ 811 (825)
+..|.. ..+-..+++.| ..+.|+||+.+|..|-+.|++..+++ ..|. +.....+|.++- +++.+..+
T Consensus 143 ~~KP~p-~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~--~~~~l~~~ 218 (220)
T TIGR03351 143 AGRPAP-DLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLD--SVADLPAL 218 (220)
T ss_pred CCCCCH-HHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeec--CHHHHHHh
Confidence 122322 12333444432 56899999999999999999986321 1222 222345777764 67766554
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0079 Score=64.41 Aligned_cols=119 Identities=15% Similarity=0.220 Sum_probs=81.9
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.+.++.|++.|+++.++|+.+...+..+-+.+|+.... ..++.+.+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F-----~~vi~~~~~---------------------- 194 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF-----SVVQAGTPI---------------------- 194 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhhe-----EEEEecCCC----------------------
Confidence 56799999999999999999999999999999999999986531 122222211
Q ss_pred HHHHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCccEe---cCCCc-hHHHHHhcCeeeccCCchHHHHHH
Q 003371 745 PFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVGLS---MGIQG-TEVAKESSDIVILDDDFTSVATVL 812 (825)
Q Consensus 745 P~dK~~lV~~Lq~~---g~vVa~~GDG~NDapALk~AdVGia---mg~~g-t~vAk~aaDivlldd~f~sIv~~i 812 (825)
+..+..+.+.+++. .+.++|+||+.+|..|-+.|++-.. -|... .+.....+|+++ +++..|...+
T Consensus 195 ~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 195 LSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred CCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 00112233333332 3568999999999999999987543 33211 123344689887 4788887765
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.006 Score=62.70 Aligned_cols=107 Identities=13% Similarity=0.107 Sum_probs=73.6
Q ss_pred CCcccHHHHHH-HHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 665 PCRPGVQKAVE-ACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 665 plR~~v~~aI~-~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
.++|++.+.|+ .+++.|+++.++|+=....++.+|+..|+..... ++ |.++..-.. .+ ..-..|
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~------~i-~t~le~~~g-------g~-~~g~~c 158 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLN------LI-ASQIERGNG-------GW-VLPLRC 158 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCc------EE-EEEeEEeCC-------ce-EcCccC
Confidence 46899999996 7888999999999999999999999966643211 11 111110000 00 011346
Q ss_pred CHHHHHHHHHHHH-hCCCEEEEEcCCccCHHHhhhCCccEecCC
Q 003371 744 SPFDKLLMVQCLK-KKGHVVAVTGDGTNDAPALKEADVGLSMGI 786 (825)
Q Consensus 744 sP~dK~~lV~~Lq-~~g~vVa~~GDG~NDapALk~AdVGiamg~ 786 (825)
.-+.|..-++..- ......-+=||+.||.|+|+.||-.++++.
T Consensus 159 ~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 159 LGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred CChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 6788987666432 222344578999999999999999999863
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0072 Score=61.62 Aligned_cols=39 Identities=23% Similarity=0.377 Sum_probs=36.0
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECG 703 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~G 703 (825)
++.+++.+++++|++.|+.+.++||.....+..+.++++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477999999999999999999999999999999998854
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0084 Score=61.67 Aligned_cols=104 Identities=15% Similarity=0.125 Sum_probs=73.4
Q ss_pred CCcccHHHHH-HHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhc-CCHHHHHhhccCeeE-EE
Q 003371 665 PCRPGVQKAV-EACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRN-YTDEERIQKVDKIRV-MA 741 (825)
Q Consensus 665 plR~~v~~aI-~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~-~~~~~~~~~~~~~~V-~a 741 (825)
+++|++.+.| +.+++.|+++.++|+-....+..+++.+|+.... . ++ |.++.. ++ -++ -.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-----~-~i-~t~l~~~~t----------g~~~g~ 157 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-----N-LI-ASQMQRRYG----------GWVLTL 157 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-----c-eE-EEEEEEEEc----------cEECCc
Confidence 4589999999 5788899999999999999999999999963211 0 11 111110 00 001 12
Q ss_pred ecCHHHHHHHHHHH-HhCCCEEEEEcCCccCHHHhhhCCccEecC
Q 003371 742 RSSPFDKLLMVQCL-KKKGHVVAVTGDGTNDAPALKEADVGLSMG 785 (825)
Q Consensus 742 r~sP~dK~~lV~~L-q~~g~vVa~~GDG~NDapALk~AdVGiamg 785 (825)
.|..+.|..-++.. .......-+=||..||.|+|+.|+-.++++
T Consensus 158 ~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 158 RCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred cCCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 36678898776644 223344456799999999999999999986
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.011 Score=62.88 Aligned_cols=124 Identities=13% Similarity=0.140 Sum_probs=80.3
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+++.++.|++.|+++.++|+-....+..+-+.+||... ...++.+.+... ..-.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~-----Fd~ii~~~d~~~----------------~KP~ 167 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGF-----FSVVLAAEDVYR----------------GKPD 167 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhh-----CcEEEecccCCC----------------CCCC
Confidence 5689999999999999999999999999999999999998653 223444433221 1112
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE-ecCCCchHHHHHhcCeeeccCCchHHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGL-SMGIQGTEVAKESSDIVILDDDFTSVATV 811 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGi-amg~~gt~vAk~aaDivlldd~f~sIv~~ 811 (825)
|+-=....+.+.-....+.|+||..+|..|-+.|++-. ++...+.......+|.++- +++.+...
T Consensus 168 Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~--~~~el~~~ 233 (260)
T PLN03243 168 PEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVR--RLDDLSVV 233 (260)
T ss_pred HHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeC--CHHHHHHH
Confidence 22112223333323455889999999999999999843 2211222222234787755 66665444
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0095 Score=63.02 Aligned_cols=94 Identities=17% Similarity=0.192 Sum_probs=67.4
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.+.++.|++.|+++.++|+.....+..+-++.|+.... ...++.+.+. .+..
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f----~d~ii~~~~~------------------~~~K 156 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYR----PDYNVTTDDV------------------PAGR 156 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCC----CceEEccccC------------------CCCC
Confidence 46799999999999999999999999999999999999986521 0122222211 1122
Q ss_pred HHHHHHHHHHHHhCC----CEEEEEcCCccCHHHhhhCCcc
Q 003371 745 PFDKLLMVQCLKKKG----HVVAVTGDGTNDAPALKEADVG 781 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g----~vVa~~GDG~NDapALk~AdVG 781 (825)
| +...+.+.+++.| +.+.|+||..+|..|-+.|++-
T Consensus 157 P-~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 157 P-APWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred C-CHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 3 2234445555544 3488999999999999999864
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.011 Score=63.27 Aligned_cols=123 Identities=15% Similarity=0.172 Sum_probs=82.2
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++-||+.+.++.|++.|+++.++||.....+..+-+..|+.... ...++.+.+. .+..
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~----~d~i~~~~~~------------------~~~K 158 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYR----PDHVVTTDDV------------------PAGR 158 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCC----ceEEEcCCcC------------------CCCC
Confidence 46799999999999999999999999999988888888765421 0112222111 1112
Q ss_pred HHHHHHHHHHHHhCC----CEEEEEcCCccCHHHhhhCCc---cEecCCCc------------------------hHHHH
Q 003371 745 PFDKLLMVQCLKKKG----HVVAVTGDGTNDAPALKEADV---GLSMGIQG------------------------TEVAK 793 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g----~vVa~~GDG~NDapALk~AdV---Giamg~~g------------------------t~vAk 793 (825)
| +..-+.+.+++.| +.+.|+||+.+|..|-+.|++ |+.-|... .+...
T Consensus 159 P-~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 237 (267)
T PRK13478 159 P-YPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRA 237 (267)
T ss_pred C-ChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 3 2233455555543 458999999999999999996 55555220 22334
Q ss_pred HhcCeeeccCCchHHHHHH
Q 003371 794 ESSDIVILDDDFTSVATVL 812 (825)
Q Consensus 794 ~aaDivlldd~f~sIv~~i 812 (825)
..+|+++- ++..+...+
T Consensus 238 ~~a~~vi~--~~~~l~~~l 254 (267)
T PRK13478 238 AGAHYVID--TIADLPAVI 254 (267)
T ss_pred cCCCeehh--hHHHHHHHH
Confidence 45788774 677777655
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.013 Score=61.91 Aligned_cols=120 Identities=17% Similarity=0.148 Sum_probs=80.1
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.+.++.|++.|+++.++|+-....+..+-+..||... ...++.+.+... ..-.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~-----Fd~iv~~~~~~~----------------~KP~ 166 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDF-----FQAVIIGSECEH----------------AKPH 166 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhh-----CcEEEecCcCCC----------------CCCC
Confidence 5679999999999999999999999999999999999998753 122333332221 1122
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE---ecCCCchHHHHHhcCeeeccCCchH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGL---SMGIQGTEVAKESSDIVILDDDFTS 807 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGi---amg~~gt~vAk~aaDivlldd~f~s 807 (825)
|+-=....+.+.-..+.+.|+||..+|..|-++|++-. .-|....+.....+|.++- ++..
T Consensus 167 p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~--~~~e 230 (248)
T PLN02770 167 PDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIK--DYED 230 (248)
T ss_pred hHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEec--cchh
Confidence 32223333333333456899999999999999998743 2231222233446888875 4554
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.015 Score=58.35 Aligned_cols=144 Identities=18% Similarity=0.232 Sum_probs=93.0
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCccccccc----------------------ccceeeechhhh
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQV----------------------EKGEVVEGVEFR 723 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~----------------------~~~~vi~G~~~~ 723 (825)
+-||+.++.+.++.. ...+++|---.+-++++|..+|+......- .....++|+++-
T Consensus 84 lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geelf 162 (315)
T COG4030 84 LVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEELF 162 (315)
T ss_pred cCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHHH
Confidence 449999999999866 566777777888899999999996432110 001122333211
Q ss_pred --------cCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCC-c-cEecCCCchH
Q 003371 724 --------NYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEAD-V-GLSMGIQGTE 790 (825)
Q Consensus 724 --------~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~---g~vVa~~GDG~NDapALk~Ad-V-Giamg~~gt~ 790 (825)
.+.+.|.-+++.++.+... ..|.++++.+-+. ....+++||.+.|..||+.+. - |+|+.-+|.+
T Consensus 163 e~lDe~F~rLip~E~gki~~~vk~VGg---g~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNe 239 (315)
T COG4030 163 EKLDELFSRLIPSEVGKIVESVKAVGG---GEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNE 239 (315)
T ss_pred HHHHHHHhhcCHHHHHHHHHhhhhccC---cchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCc
Confidence 1122222233333333222 2455555554443 234678999999999999984 2 3666668999
Q ss_pred HHHHhcCeeeccCCchHHHHHHH
Q 003371 791 VAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 791 vAk~aaDivlldd~f~sIv~~i~ 813 (825)
-|...||+.+...+..+...+|.
T Consensus 240 Yal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 240 YALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred ccccccceEEeccchhhhhHHHH
Confidence 99999999999888888877764
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.01 Score=60.27 Aligned_cols=94 Identities=17% Similarity=0.124 Sum_probs=67.2
Q ss_pred cCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEe
Q 003371 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMAR 742 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar 742 (825)
.+++.++++++++.|++.|+++.++||-....+..+-+.+|+.... ..++.+.+ +..+
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f-----~~~~~~~~-----------------~~~K 161 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF-----PVQIWMED-----------------CPPK 161 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC-----CEEEeecC-----------------CCCC
Confidence 3556788899999999999999999999999999999999986431 12222221 1113
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhC
Q 003371 743 SSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEA 778 (825)
Q Consensus 743 ~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~A 778 (825)
-.|+--..+.+.+.-..+.+.|+||+.+|..|-+.|
T Consensus 162 P~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 162 PNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred cCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 345444445555544456789999999999987765
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.024 Score=69.39 Aligned_cols=170 Identities=19% Similarity=0.218 Sum_probs=101.3
Q ss_pred HHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecc--cCCCcccHHHHHHHHHh-CCCeEEE
Q 003371 610 MENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGI--KDPCRPGVQKAVEACQS-AGVEIKM 686 (825)
Q Consensus 610 ~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i--~DplR~~v~~aI~~l~~-aGI~V~m 686 (825)
++.....|.....|.+++-| |-|++..... ...+-+++.++++.|.+ .|+.|++
T Consensus 480 ~~~~~~~y~~~~~rLi~~D~-----------------------DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~i 536 (726)
T PRK14501 480 AEEIIARYRAASRRLLLLDY-----------------------DGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAI 536 (726)
T ss_pred HHHHHHHHHhccceEEEEec-----------------------CccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEE
Confidence 44555666555567777655 3355543211 12367899999999999 6999999
Q ss_pred EcCCCHHHHHHHHHHcCC--cccccccccceee-echhhh----------------------------------------
Q 003371 687 ITGDNVFTAKAIATECGI--LRLDQQVEKGEVV-EGVEFR---------------------------------------- 723 (825)
Q Consensus 687 vTGD~~~tA~aIA~~~GI--~~~~~~~~~~~vi-~G~~~~---------------------------------------- 723 (825)
+||.............++ +..+ +..+. .|.++.
T Consensus 537 vSGR~~~~l~~~~~~~~l~liaen----G~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~ 612 (726)
T PRK14501 537 ISGRDRDTLERWFGDLPIHLVAEH----GAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHY 612 (726)
T ss_pred EeCCCHHHHHHHhCCCCeEEEEeC----CEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEc
Confidence 999999999887765553 1111 11000 011100
Q ss_pred -cCCH-------HHHH----hhcc--CeeEE-------EecCHHHHHHHHHHHHhC--CCEEEEEcCCccCHHHhhhC--
Q 003371 724 -NYTD-------EERI----QKVD--KIRVM-------ARSSPFDKLLMVQCLKKK--GHVVAVTGDGTNDAPALKEA-- 778 (825)
Q Consensus 724 -~~~~-------~~~~----~~~~--~~~V~-------ar~sP~dK~~lV~~Lq~~--g~vVa~~GDG~NDapALk~A-- 778 (825)
+... +++. ..+. .+.+. -+..--+|...++.+.+. -..|+++||+.||.+|++.+
T Consensus 613 r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~ 692 (726)
T PRK14501 613 RNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPE 692 (726)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhccc
Confidence 0000 0111 1111 11111 122224788888888764 35799999999999999997
Q ss_pred -CccEecCCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 779 -DVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 779 -dVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
..+++|| ++ +.+|+..|-+. ..+.+.++
T Consensus 693 ~~~~v~vG-~~----~s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 693 TAITVKVG-PG----ESRARYRLPSQ--REVRELLR 721 (726)
T ss_pred CceEEEEC-CC----CCcceEeCCCH--HHHHHHHH
Confidence 5889998 43 56678887743 55665554
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0089 Score=62.35 Aligned_cols=88 Identities=25% Similarity=0.305 Sum_probs=63.2
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeE
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGD----NVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRV 739 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD----~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V 739 (825)
-.+.|++++.++.+++.|+++.++||. ...|+..+.+..||..... ... +
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~---f~v-----------------------i 166 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNM---NPV-----------------------I 166 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccc---eeE-----------------------E
Confidence 346688999999999999999999995 4679999999999942110 112 2
Q ss_pred EEecCH--HHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc
Q 003371 740 MARSSP--FDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVG 781 (825)
Q Consensus 740 ~ar~sP--~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVG 781 (825)
++..++ .+|.. .+++.| ++.|+||..+|..|-++|++-
T Consensus 167 l~gd~~~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 167 FAGDKPGQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred EcCCCCCCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCc
Confidence 222221 34443 444554 488999999999999999775
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.023 Score=58.61 Aligned_cols=112 Identities=14% Similarity=0.136 Sum_probs=72.1
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.+.++.|+++|+++.++|+.....+..+-+..|+... ..++.+.+.. +..
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~------~~i~~~~~~~------------------~~K 138 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP------EVFVTAERVK------------------RGK 138 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc------cEEEEHHHhc------------------CCC
Confidence 5689999999999999999999999887777776677776321 1233332221 122
Q ss_pred HHHHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCcc-EecCCCchHHHHHhcCeeec
Q 003371 745 PFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVG-LSMGIQGTEVAKESSDIVIL 801 (825)
Q Consensus 745 P~dK~~lV~~Lq~~---g~vVa~~GDG~NDapALk~AdVG-iamg~~gt~vAk~aaDivll 801 (825)
|. -.-+...+++. .+.+.|+||..+|..|-+.|++- +++...........+|.++-
T Consensus 139 P~-p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 139 PE-PDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLH 198 (218)
T ss_pred CC-cHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEec
Confidence 32 12233333333 46789999999999999999974 44431112223345677654
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.01 Score=61.92 Aligned_cols=88 Identities=23% Similarity=0.242 Sum_probs=62.4
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEE
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGD----NVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMA 741 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD----~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~a 741 (825)
+.+++++.++.+++.|+++.++|+- ...++..+.+.+||... ...++.|.....
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~-----f~~i~~~d~~~~----------------- 172 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM-----NPVIFAGDKPGQ----------------- 172 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh-----eeEEECCCCCCC-----------------
Confidence 4455999999999999999999997 67799999999999642 122232222110
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc
Q 003371 742 RSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVG 781 (825)
Q Consensus 742 r~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVG 781 (825)
..| +|. ..+++.| ++.|+||..||..|-++|.+-
T Consensus 173 -~Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 173 -YQY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred -CCC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 112 232 2445555 478999999999999999754
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.012 Score=57.19 Aligned_cols=107 Identities=18% Similarity=0.183 Sum_probs=74.8
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC----Ccccccc-cccceeeechhhhcCCHHHHHhhccCeeE
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECG----ILRLDQQ-VEKGEVVEGVEFRNYTDEERIQKVDKIRV 739 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~G----I~~~~~~-~~~~~vi~G~~~~~~~~~~~~~~~~~~~V 739 (825)
.++|+-++.++.|++.++.++++|+-...-...+-...+ |..-... ....+..+|+-+-...++ ..
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~d---------s~ 143 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDD---------SQ 143 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCc---------cc
Confidence 578999999999999999999999988777777777665 3211000 001112222211111110 12
Q ss_pred EEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEec
Q 003371 740 MARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSM 784 (825)
Q Consensus 740 ~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiam 784 (825)
| --||...|+.|++..+.+-++|||+.|..|-+.+|+=+|-
T Consensus 144 f----G~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 144 F----GHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred c----CCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 2 2489999999999999999999999999999999988864
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.027 Score=57.07 Aligned_cols=93 Identities=14% Similarity=0.152 Sum_probs=65.2
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.++++.|++.|+++.++|+-+...+..+.+.+||.... ..++...+. ....
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f-----d~i~~s~~~------------------~~~K 148 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF-----DAVLSADAV------------------RAYK 148 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh-----heeEehhhc------------------CCCC
Confidence 57899999999999999999999999999999999999985421 122222211 1123
Q ss_pred HHHHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCcc
Q 003371 745 PFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVG 781 (825)
Q Consensus 745 P~dK~~lV~~Lq~~---g~vVa~~GDG~NDapALk~AdVG 781 (825)
|. ...+-..+++. -+.+.++||+.+|..+-+.|++-
T Consensus 149 P~-~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 149 PA-PQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred CC-HHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 32 12223333333 35688999999999999988764
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.05 Score=53.17 Aligned_cols=101 Identities=20% Similarity=0.228 Sum_probs=68.4
Q ss_pred cCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHH---HHHHHc---C--Cccccccccccee-eechhhhcCCHHHHHhh
Q 003371 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAK---AIATEC---G--ILRLDQQVEKGEV-VEGVEFRNYTDEERIQK 733 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~---aIA~~~---G--I~~~~~~~~~~~v-i~G~~~~~~~~~~~~~~ 733 (825)
+|.+.|+++++++++++.|+++..+||.....+. ....++ | +.. ..++ -.|..+..+..
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~------g~li~~~g~~~~~~~~------ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH------GPVLLSPDRLFAALHR------ 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC------ceEEEcCCcchhhhhc------
Confidence 5788999999999999999999999999998884 455552 3 321 1111 12222211100
Q ss_pred ccCeeEEEecCHHH-HHHHHHHHHh-----CCCEEEEEcCCccCHHHhhhCCc
Q 003371 734 VDKIRVMARSSPFD-KLLMVQCLKK-----KGHVVAVTGDGTNDAPALKEADV 780 (825)
Q Consensus 734 ~~~~~V~ar~sP~d-K~~lV~~Lq~-----~g~vVa~~GDG~NDapALk~AdV 780 (825)
.+. ...|+. |...++.+++ ....++..|++.+|+.|-++++|
T Consensus 93 ----e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 93 ----EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred ----ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCC
Confidence 122 223444 8888888877 45788899999999999998854
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.017 Score=57.62 Aligned_cols=91 Identities=14% Similarity=0.269 Sum_probs=61.0
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.++++.|+++|+++.++|+.. .+..+.+.+|+.... ..++.+.+. .+..
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~~f-----~~~~~~~~~------------------~~~k 141 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLIDYF-----DAIVDPAEI------------------KKGK 141 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHhhC-----cEEEehhhc------------------CCCC
Confidence 578999999999999999999999743 245677888875431 122322221 1223
Q ss_pred HHHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc
Q 003371 745 PFDKLLMVQCLKKKG---HVVAVTGDGTNDAPALKEADVG 781 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g---~vVa~~GDG~NDapALk~AdVG 781 (825)
|. ...+-..+++.+ ..+.|+||..+|..|-+.|++-
T Consensus 142 p~-p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 142 PD-PEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred CC-hHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 32 223334444433 4588999999999999999874
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.056 Score=54.04 Aligned_cols=127 Identities=17% Similarity=0.116 Sum_probs=70.1
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCcccccccccceeeechhhhcCCHHHH
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNV---------------FTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEER 730 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~---------------~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~ 730 (825)
+.||+.+++++|++.|+++.++|..+. .....+-+..|+.-. . ++.......
T Consensus 30 ~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~------~-i~~~~~~~~------ 96 (181)
T PRK08942 30 PIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD------G-IYYCPHHPE------ 96 (181)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc------e-EEECCCCCC------
Confidence 579999999999999999999998762 111223334555210 0 110000000
Q ss_pred HhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCC-CchH---HHHHhc--CeeeccCC
Q 003371 731 IQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGI-QGTE---VAKESS--DIVILDDD 804 (825)
Q Consensus 731 ~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~-~gt~---vAk~aa--Divlldd~ 804 (825)
...-..+-.|+-=....+.+.-..+.+.|+||..+|..+-+.|++. +++. .|.. .....+ |.++- +
T Consensus 97 -----~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~-~i~v~~g~~~~~~~~~~~~~~~ii~--~ 168 (181)
T PRK08942 97 -----DGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVT-PVLVRTGKGVTTLAEGAAPGTWVLD--S 168 (181)
T ss_pred -----CCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCe-EEEEcCCCCchhhhcccCCCceeec--C
Confidence 0000111223322333344433346789999999999999999863 2222 2221 122235 77764 6
Q ss_pred chHHHHHHH
Q 003371 805 FTSVATVLS 813 (825)
Q Consensus 805 f~sIv~~i~ 813 (825)
+..+...+.
T Consensus 169 l~el~~~l~ 177 (181)
T PRK08942 169 LADLPQALK 177 (181)
T ss_pred HHHHHHHHH
Confidence 777777654
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.04 Score=54.71 Aligned_cols=94 Identities=21% Similarity=0.215 Sum_probs=61.7
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.+.++.|++.|+++.++|+-.... ..+..++|+.... ..++.+.+.. ...-.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f-----~~i~~~~~~~----------------~~KP~ 142 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF-----DVVIFSGDVG----------------RGKPD 142 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC-----CEEEEcCCCC----------------CCCCC
Confidence 678999999999999999999999988877 6666668886421 1222222111 01111
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADV 780 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdV 780 (825)
|+-=..+.+.+.-....+.|+||...|..|-++|++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 143 PDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 222222333333234678899999999999888866
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.068 Score=59.54 Aligned_cols=120 Identities=15% Similarity=0.188 Sum_probs=81.1
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.+.++.|+++|+++.++|+-....+..+-+..||... ...++.+.++. +..
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~y-----Fd~Iv~sddv~------------------~~K 272 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGF-----FSVIVAAEDVY------------------RGK 272 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHH-----ceEEEecCcCC------------------CCC
Confidence 4679999999999999999999999999999999999998653 12233333221 122
Q ss_pred HHH--HHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCc-hHHHH-HhcCeeeccCCchHHHH
Q 003371 745 PFD--KLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQG-TEVAK-ESSDIVILDDDFTSVAT 810 (825)
Q Consensus 745 P~d--K~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~g-t~vAk-~aaDivlldd~f~sIv~ 810 (825)
|.. =....+.+.-....+.|+||..+|..|-+.|++-. .+..+ ....+ ..+|+++- +|..+..
T Consensus 273 P~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~-IgV~~~~~~~~l~~Ad~iI~--s~~EL~~ 339 (381)
T PLN02575 273 PDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKC-VAVASKHPIYELGAADLVVR--RLDELSI 339 (381)
T ss_pred CCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEE-EEECCCCChhHhcCCCEEEC--CHHHHHH
Confidence 321 12233333333567999999999999999998843 33322 22222 34787764 7777643
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.036 Score=57.15 Aligned_cols=93 Identities=18% Similarity=0.241 Sum_probs=66.3
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.++++.|++.|+++.++|+-+...+....+.+|+.... ..++.+.++ .+..
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f-----~~i~~~~~~------------------~~~K 150 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF-----DAVITSEEE------------------GVEK 150 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc-----cEEEEeccC------------------CCCC
Confidence 57899999999999999999999999988888888999986421 112222211 1223
Q ss_pred HHHHHHHHHHHHhC---CCEEEEEcCCc-cCHHHhhhCCcc
Q 003371 745 PFDKLLMVQCLKKK---GHVVAVTGDGT-NDAPALKEADVG 781 (825)
Q Consensus 745 P~dK~~lV~~Lq~~---g~vVa~~GDG~-NDapALk~AdVG 781 (825)
|... .+...+++. ...+.|+||.. +|..+-+.|++-
T Consensus 151 P~~~-~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~ 190 (221)
T TIGR02253 151 PHPK-IFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMK 190 (221)
T ss_pred CCHH-HHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCE
Confidence 3222 233444444 35689999998 999999999873
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.029 Score=60.95 Aligned_cols=107 Identities=15% Similarity=0.040 Sum_probs=75.2
Q ss_pred ccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcc-cccccccceeeechhhhcCCHHHHHhhccCeeEE
Q 003371 662 IKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILR-LDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVM 740 (825)
Q Consensus 662 i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~-~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ 740 (825)
..+++.|++.++++.|++.|+++.++||....++..+.+.+|+.. ... .+.|.+- ...+..... -
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~------~i~~~~~----~~~~~~~~~----~ 249 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFD------DLIGRPP----DMHFQREQG----D 249 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchh------hhhCCcc----hhhhcccCC----C
Confidence 568899999999999999999999999999999999999999864 110 1111110 000000000 1
Q ss_pred EecCHHHHHHHHHHHHh-CCCEEEEEcCCccCHHHhhhCCccE
Q 003371 741 ARSSPFDKLLMVQCLKK-KGHVVAVTGDGTNDAPALKEADVGL 782 (825)
Q Consensus 741 ar~sP~dK~~lV~~Lq~-~g~vVa~~GDG~NDapALk~AdVGi 782 (825)
-+-.|+-+...++.+-. .-..+.|+||..+|+.|-+.|++-.
T Consensus 250 ~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 250 KRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred CCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 24456677766665533 2377899999999999999998764
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.041 Score=58.05 Aligned_cols=45 Identities=29% Similarity=0.407 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHH
Q 003371 746 FDKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEV 791 (825)
Q Consensus 746 ~dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~v 791 (825)
..|..-|+.|+++ + +.|.++||+.||.+||..++-||.+| ++.+.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e 212 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPE 212 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHH
Confidence 4688888888876 2 34667899999999999999999999 55554
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.055 Score=53.72 Aligned_cols=112 Identities=14% Similarity=0.070 Sum_probs=72.8
Q ss_pred EEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhh
Q 003371 655 TLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGD-NVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQK 733 (825)
Q Consensus 655 ~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD-~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~ 733 (825)
......+-+-+++||+.+.++.|+++|+++.++|+- ....+..+-..+||....... -+...
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~-----------------~~~~~ 97 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTV-----------------PMHSL 97 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcc-----------------cHHHh
Confidence 355566666788999999999999999999999965 899999999999985211000 00000
Q ss_pred ccCeeEEEecCHHHH--HHHHHHHHhC------CCEEEEEcCCccCHHHhhhCCccEec
Q 003371 734 VDKIRVMARSSPFDK--LLMVQCLKKK------GHVVAVTGDGTNDAPALKEADVGLSM 784 (825)
Q Consensus 734 ~~~~~V~ar~sP~dK--~~lV~~Lq~~------g~vVa~~GDG~NDapALk~AdVGiam 784 (825)
++. .+.+...+..| ..+.+.+.+. -..+.|+||...|+.|-++|.+-...
T Consensus 98 Fd~-iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 98 FDD-RIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred cee-eeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 000 01121111122 2334444432 35689999999999999999875543
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.088 Score=49.53 Aligned_cols=92 Identities=17% Similarity=0.106 Sum_probs=62.2
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCC--------HHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhcc
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDN--------VFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVD 735 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~--------~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~ 735 (825)
-++.|++.++++.|+++|+++.++|+.. .....++.+.+|+... .....+ .
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~------~~~~~~-~-------------- 82 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPID------VLYACP-H-------------- 82 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEE------EEEECC-C--------------
Confidence 3678999999999999999999999998 7778888898888521 111111 0
Q ss_pred CeeEEEecCHHHHHHHHHHHH-hCCCEEEEEcC-CccCHHHhhhCCc
Q 003371 736 KIRVMARSSPFDKLLMVQCLK-KKGHVVAVTGD-GTNDAPALKEADV 780 (825)
Q Consensus 736 ~~~V~ar~sP~dK~~lV~~Lq-~~g~vVa~~GD-G~NDapALk~AdV 780 (825)
..+-.|+-=..+.+.++ -..+.++|+|| -.+|..+-+.|++
T Consensus 83 ----~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 83 ----CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred ----CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCC
Confidence 00111221123333331 23466999999 5899999998865
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.054 Score=62.70 Aligned_cols=122 Identities=20% Similarity=0.170 Sum_probs=82.3
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.+.++.|++.|+++.++|+-....+..+-+.+|+.... ..++.+.+.. ....
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f-----~~i~~~d~v~-----------------~~~k 387 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV-----TETFSIEQIN-----------------SLNK 387 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc-----ceeEecCCCC-----------------CCCC
Confidence 67899999999999999999999999999999999999986531 2233333221 1122
Q ss_pred HHHHHHHHHHHHh-CCCEEEEEcCCccCHHHhhhCCcc-EecCC-CchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 745 PFDKLLMVQCLKK-KGHVVAVTGDGTNDAPALKEADVG-LSMGI-QGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 745 P~dK~~lV~~Lq~-~g~vVa~~GDG~NDapALk~AdVG-iamg~-~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
|+ .+...+++ .-+.+.|+||..+|..|-+.|++- |.+.. .+.+-....+|+++- ++..+...+.
T Consensus 388 P~---~~~~al~~l~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l~ 454 (459)
T PRK06698 388 SD---LVKSILNKYDIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGILS 454 (459)
T ss_pred cH---HHHHHHHhcCcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHHH
Confidence 32 12222222 135689999999999999999973 32221 122212345788874 7888777664
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.04 Score=54.97 Aligned_cols=92 Identities=14% Similarity=0.203 Sum_probs=61.9
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
-++.||+.++++.|++.|+++.++|+- ..+..+-+.+|+.... ..++.+.+. .+.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f-----~~v~~~~~~------------------~~~ 141 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF-----DAIVDADEV------------------KEG 141 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC-----CEeeehhhC------------------CCC
Confidence 468899999999999999999999986 6677888888886421 112222111 112
Q ss_pred CHHHHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCcc
Q 003371 744 SPFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVG 781 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~---g~vVa~~GDG~NDapALk~AdVG 781 (825)
.|... .+-+.+++. .+.+.|+||..+|..+-+.|++-
T Consensus 142 kp~~~-~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 142 KPHPE-TFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred CCChH-HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 23221 122333333 35578999999999999999764
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.035 Score=54.26 Aligned_cols=97 Identities=16% Similarity=0.230 Sum_probs=67.8
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
.++.|++.+.++.|++.|+++.++|+-.........+++|+.... ..++...+.... .-
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f-----~~i~~~~~~~~~----------------Kp 134 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYF-----DEIISSDDVGSR----------------KP 134 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGC-----SEEEEGGGSSSS----------------TT
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCccccccccccccccccc-----ccccccchhhhh----------------hh
Confidence 467899999999999999999999999999999999999987421 122222222211 11
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc
Q 003371 744 SPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVG 781 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVG 781 (825)
.|+-=..+.+.+.-..+.+.++||...|..+-++|++-
T Consensus 135 ~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 135 DPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp SHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 11211233333433456799999999999999998753
|
... |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.083 Score=52.49 Aligned_cols=124 Identities=13% Similarity=0.019 Sum_probs=67.7
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCHH--------HHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCe
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNVF--------TAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKI 737 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~~--------tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~ 737 (825)
+-||++++++.|++.|+++.++|+.... .+...-+..|+..-.. .....+.+..
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~----~~~~~~~~~~-------------- 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYL----CPHKHGDGCE-------------- 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEE----CcCCCCCCCC--------------
Confidence 6799999999999999999999987631 1222333455432000 0000000000
Q ss_pred eEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCc--hH--------HHHHhcCeeeccCCchH
Q 003371 738 RVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQG--TE--------VAKESSDIVILDDDFTS 807 (825)
Q Consensus 738 ~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~g--t~--------vAk~aaDivlldd~f~s 807 (825)
..+-.|+-=..+.+.+.-.-+-+.|+||..+|..|-+.|++-...-..| .+ ..+..+|.++- ++..
T Consensus 91 --~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~--~~~e 166 (173)
T PRK06769 91 --CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAE--NFED 166 (173)
T ss_pred --CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhh--CHHH
Confidence 0111222212333333322356899999999999999998755432222 22 11234666653 5666
Q ss_pred HHHH
Q 003371 808 VATV 811 (825)
Q Consensus 808 Iv~~ 811 (825)
+...
T Consensus 167 l~~~ 170 (173)
T PRK06769 167 AVNW 170 (173)
T ss_pred HHHH
Confidence 6554
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.058 Score=55.57 Aligned_cols=119 Identities=13% Similarity=0.140 Sum_probs=75.0
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
+++||+.+.++.|++. +++.++|+-....+..+.++.|+.... ..++.+.+. ....
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f-----d~i~~~~~~------------------~~~K 152 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF-----DDIFVSEDA------------------GIQK 152 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc-----CEEEEcCcc------------------CCCC
Confidence 5789999999999999 999999999999999999999986531 112221111 1112
Q ss_pred HHHHHHHHHHHHhC----CCEEEEEcCCc-cCHHHhhhCCc---cEecCCCchHHHHHhcCeeeccCCchHHHHH
Q 003371 745 PFDKLLMVQCLKKK----GHVVAVTGDGT-NDAPALKEADV---GLSMGIQGTEVAKESSDIVILDDDFTSVATV 811 (825)
Q Consensus 745 P~dK~~lV~~Lq~~----g~vVa~~GDG~-NDapALk~AdV---Giamg~~gt~vAk~aaDivlldd~f~sIv~~ 811 (825)
|... .+-+.+++. -+.+.|+||.. +|..+-+.+++ ++..|. .++.....+|.++- +++.|..+
T Consensus 153 P~~~-~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~-~~~~~~~~~~~~~~--~~~el~~~ 223 (224)
T TIGR02254 153 PDKE-IFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDM-HPNPDDIIPTYEIR--SLEELYEI 223 (224)
T ss_pred CCHH-HHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCC-CCCCCCCCCceEEC--CHHHHHhh
Confidence 3222 122333333 34588999998 89999999986 333331 22112234565553 56655543
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.11 Score=53.79 Aligned_cols=122 Identities=16% Similarity=0.168 Sum_probs=77.5
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.++++.|+ +|+++.++|......+...-+..|+.... ..++.+.+.. ...
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f-----d~v~~~~~~~------------------~~K 150 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF-----DLLVISEQVG------------------VAK 150 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc-----CEEEEECccC------------------CCC
Confidence 46899999999999 68999999999988888888888886421 1122221110 123
Q ss_pred HHHHHHHHHHHHhCC----CEEEEEcCCc-cCHHHhhhCCccE-ecCCCchH-HHHHhcCeeeccCCchHHHHHHH
Q 003371 745 PFDKLLMVQCLKKKG----HVVAVTGDGT-NDAPALKEADVGL-SMGIQGTE-VAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g----~vVa~~GDG~-NDapALk~AdVGi-amg~~gt~-vAk~aaDivlldd~f~sIv~~i~ 813 (825)
|. ..-+-..+++.| +.+.|+||.. +|..+-+.|++-. .....+.. .....+|.++. ++..+..+++
T Consensus 151 P~-p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~--~~~el~~~l~ 223 (224)
T PRK09449 151 PD-VAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVS--SLSELEQLLC 223 (224)
T ss_pred CC-HHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEEC--CHHHHHHHHh
Confidence 32 223334444443 4689999998 7999999999753 32211211 11124677764 6777776553
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.24 Score=47.94 Aligned_cols=107 Identities=16% Similarity=0.243 Sum_probs=78.1
Q ss_pred HHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHH
Q 003371 614 IHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVF 693 (825)
Q Consensus 614 i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~ 693 (825)
.+.+...|.|.+.+-. + -|+++.= ....-|++++=+..++.+|+++.++|--+..
T Consensus 20 ~~~L~~~Gikgvi~Dl---D--------------------NTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~ 74 (175)
T COG2179 20 PDILKAHGIKGVILDL---D--------------------NTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKES 74 (175)
T ss_pred HHHHHHcCCcEEEEec---c--------------------Cceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHH
Confidence 4567889999887643 1 1333322 2345688999999999999999999999999
Q ss_pred HHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhC---CCEEEEEcCCc-
Q 003371 694 TAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKK---GHVVAVTGDGT- 769 (825)
Q Consensus 694 tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~---g~vVa~~GDG~- 769 (825)
.+..+|..+|+.- ++--..|.-+ .+-++|++. -+.|+|+||-.
T Consensus 75 RV~~~~~~l~v~f--------------------------------i~~A~KP~~~-~fr~Al~~m~l~~~~vvmVGDqL~ 121 (175)
T COG2179 75 RVARAAEKLGVPF--------------------------------IYRAKKPFGR-AFRRALKEMNLPPEEVVMVGDQLF 121 (175)
T ss_pred HHHhhhhhcCCce--------------------------------eecccCccHH-HHHHHHHHcCCChhHEEEEcchhh
Confidence 9999999999964 3333455554 677888876 46799999974
Q ss_pred cCHHHhhhC
Q 003371 770 NDAPALKEA 778 (825)
Q Consensus 770 NDapALk~A 778 (825)
-|.-+=+.|
T Consensus 122 TDVlggnr~ 130 (175)
T COG2179 122 TDVLGGNRA 130 (175)
T ss_pred hhhhccccc
Confidence 476655544
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.099 Score=58.88 Aligned_cols=118 Identities=18% Similarity=0.151 Sum_probs=75.3
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH-HcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIAT-ECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~-~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
++.||+.+.++.|++.|+++.++|+-....+...-+ ..|+... ...++.+.+. .+.
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~-----Fd~ii~~d~v------------------~~~ 149 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKES-----FSVIVGGDEV------------------EKG 149 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhh-----CCEEEehhhc------------------CCC
Confidence 467999999999999999999999999888877665 6787542 1223332221 122
Q ss_pred CHHHHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCccEecCCCc--hHHHHHhcCeeeccCCchHH
Q 003371 744 SPFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVGLSMGIQG--TEVAKESSDIVILDDDFTSV 808 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~---g~vVa~~GDG~NDapALk~AdVGiamg~~g--t~vAk~aaDivlldd~f~sI 808 (825)
.|. ...+.+.+++. .+.+.|+||+.+|..|-+.|++....=..+ .+.....+|.++- ++..+
T Consensus 150 KP~-p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~--sl~el 216 (382)
T PLN02940 150 KPS-PDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVIN--SLLDL 216 (382)
T ss_pred CCC-HHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeC--CHhHc
Confidence 331 12333444443 466889999999999999999763221122 2333345677654 45544
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.34 Score=50.91 Aligned_cols=93 Identities=13% Similarity=0.203 Sum_probs=60.2
Q ss_pred eeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHH--HHHHHcCCcc-cccccccceeeechhhhcCCHHHHHhhc
Q 003371 658 GIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAK--AIATECGILR-LDQQVEKGEVVEGVEFRNYTDEERIQKV 734 (825)
Q Consensus 658 G~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~--aIA~~~GI~~-~~~~~~~~~vi~G~~~~~~~~~~~~~~~ 734 (825)
|.+.-...+-|+++++++.|+++|+++.++|.-....+. ...+++|+.. .. ..
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~-----~~------------------- 72 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLP-----EM------------------- 72 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCcccc-----ce-------------------
Confidence 455556778899999999999999999999996554444 5667888854 21 11
Q ss_pred cCeeEEEecCHHHHHHHHHHHHh---CCCEEEEEcCCccCHHHhhhCC
Q 003371 735 DKIRVMARSSPFDKLLMVQCLKK---KGHVVAVTGDGTNDAPALKEAD 779 (825)
Q Consensus 735 ~~~~V~ar~sP~dK~~lV~~Lq~---~g~vVa~~GDG~NDapALk~Ad 779 (825)
|+... .....-+.+.+++ .+..+.++||+.+|...+..++
T Consensus 73 ----Ii~s~-~~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 73 ----IISSG-EIAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred ----EEccH-HHHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 11110 1111222233333 2466999999999998886543
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.13 Score=55.58 Aligned_cols=121 Identities=19% Similarity=0.176 Sum_probs=73.2
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.+.++.|++.|+++.++|+-+......+-+..++..... ...++.+.+. .+..
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~---~~~~v~~~~~------------------~~~K 202 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQ---GLDVFAGDDV------------------PKKK 202 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccC---ceEEEecccc------------------CCCC
Confidence 578999999999999999999999998888877766553321100 0011122211 1112
Q ss_pred HHHH--HHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHH--HHHhcCeeeccCCchHH
Q 003371 745 PFDK--LLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEV--AKESSDIVILDDDFTSV 808 (825)
Q Consensus 745 P~dK--~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~v--Ak~aaDivlldd~f~sI 808 (825)
|.-. ..+.+.+.-....+.|+||+.+|..|-++|++....-..|..- ....+|+++- ++..+
T Consensus 203 P~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~--~~~~l 268 (286)
T PLN02779 203 PDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFD--CLGDV 268 (286)
T ss_pred CCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEEC--Chhhc
Confidence 2211 2223333323456899999999999999999765543233211 1134788763 45444
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.44 Score=53.17 Aligned_cols=66 Identities=21% Similarity=0.262 Sum_probs=45.7
Q ss_pred ecCHH---HHHHHHHHHHhC-C-----C-EEEEEcCCccCHHHhhh-----CCccEecCCCchHHHHHhcCeeeccCCch
Q 003371 742 RSSPF---DKLLMVQCLKKK-G-----H-VVAVTGDGTNDAPALKE-----ADVGLSMGIQGTEVAKESSDIVILDDDFT 806 (825)
Q Consensus 742 r~sP~---dK~~lV~~Lq~~-g-----~-vVa~~GDG~NDapALk~-----AdVGiamg~~gt~vAk~aaDivlldd~f~ 806 (825)
...|. +|..-|+.|.+. | . .+.++||+.||-.|++. +++||+|| +|.. .-.|++-|- +..
T Consensus 293 EVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~--~t~A~y~L~--dp~ 367 (384)
T PLN02580 293 EVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPK--ESNAFYSLR--DPS 367 (384)
T ss_pred EEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCC--CccceEEcC--CHH
Confidence 44553 899888888764 2 1 25899999999999996 68999999 4433 124677665 455
Q ss_pred HHHHHH
Q 003371 807 SVATVL 812 (825)
Q Consensus 807 sIv~~i 812 (825)
.+...+
T Consensus 368 eV~~~L 373 (384)
T PLN02580 368 EVMEFL 373 (384)
T ss_pred HHHHHH
Confidence 555444
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.11 Score=51.35 Aligned_cols=83 Identities=20% Similarity=0.237 Sum_probs=61.0
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDN-VFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~-~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
.+-|+++++++.|++.|+++.++|+-+ ...+..+++.+|+... +...
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~--------------------------------~~~~ 90 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL--------------------------------PHAV 90 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE--------------------------------cCCC
Confidence 577999999999999999999999988 6778888888887421 1112
Q ss_pred CHHHHHHHHHHHHhC---CCEEEEEcCCc-cCHHHhhhCCc
Q 003371 744 SPFDKLLMVQCLKKK---GHVVAVTGDGT-NDAPALKEADV 780 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~---g~vVa~~GDG~-NDapALk~AdV 780 (825)
.|.-. .+-..+++. .+.+.|+||.. .|..+-+.|++
T Consensus 91 KP~p~-~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi 130 (170)
T TIGR01668 91 KPPGC-AFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGS 130 (170)
T ss_pred CCChH-HHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCC
Confidence 33221 233344443 35599999998 79999999986
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.095 Score=54.40 Aligned_cols=94 Identities=11% Similarity=0.030 Sum_probs=65.8
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.+.++.|++.|+++.++|.-+...+...-+..|+.... ..++.+.++ .+..
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f-----d~iv~s~~~------------------~~~K 149 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL-----DLLLSTHTF------------------GYPK 149 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC-----CEEEEeeeC------------------CCCC
Confidence 57899999999999999999999999999888888888886521 112222211 1223
Q ss_pred HHHHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCccE
Q 003371 745 PFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVGL 782 (825)
Q Consensus 745 P~dK~~lV~~Lq~~---g~vVa~~GDG~NDapALk~AdVGi 782 (825)
|. -.-+...+++. .+.+.|+||..+|..|-+.|++..
T Consensus 150 P~-p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 150 ED-QRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred CC-HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeE
Confidence 32 11222333333 345899999999999999999863
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=93.95 E-value=0.25 Score=52.52 Aligned_cols=87 Identities=16% Similarity=0.136 Sum_probs=60.4
Q ss_pred cCCCcccHHHHHHHHHhCCCeEEEEcCCCHH---HHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeE
Q 003371 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVF---TAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRV 739 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~---tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V 739 (825)
..++-||+.+.++.+++.|+++.++|+-... .+...-+..|+..... .. +
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~---d~------------------------l 168 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE---EH------------------------L 168 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc---ce------------------------E
Confidence 4567799999999999999999999997643 3445556788854210 01 3
Q ss_pred EEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhh
Q 003371 740 MARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALK 776 (825)
Q Consensus 740 ~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk 776 (825)
+.|-....|..-.+.+.+.-.+|+++||-.+|.....
T Consensus 169 llr~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 169 LLKKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred EeCCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 3332223455556666666678999999999986543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.62 E-value=0.7 Score=46.65 Aligned_cols=38 Identities=11% Similarity=0.131 Sum_probs=33.3
Q ss_pred ccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 003371 668 PGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGIL 705 (825)
Q Consensus 668 ~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~ 705 (825)
..+.+.+..++++|+.|+.+|.-....-...-+++|+.
T Consensus 26 ~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 26 QPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred CccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 34678899999999999999998888888888889886
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=93.62 E-value=0.2 Score=50.79 Aligned_cols=91 Identities=18% Similarity=0.211 Sum_probs=59.3
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++-||+.++++.|++.|+++.++|+-... ...+.+.+|+.... ..++...+.. ...
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f-----d~i~~s~~~~------------------~~K 160 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF-----DFVVTSYEVG------------------AEK 160 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc-----ceEEeecccC------------------CCC
Confidence 56799999999999999999999976543 46777788875421 1121111111 112
Q ss_pred HHHHHHHHHHHHhC---CCEEEEEcCCc-cCHHHhhhCCc
Q 003371 745 PFDKLLMVQCLKKK---GHVVAVTGDGT-NDAPALKEADV 780 (825)
Q Consensus 745 P~dK~~lV~~Lq~~---g~vVa~~GDG~-NDapALk~AdV 780 (825)
|. ...+-..+++. ...+.|+||+. +|..+-++|++
T Consensus 161 P~-~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 161 PD-PKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred CC-HHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCC
Confidence 32 12333344443 35689999997 89998888864
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=93.48 E-value=0.23 Score=47.91 Aligned_cols=89 Identities=17% Similarity=0.247 Sum_probs=57.6
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
+..||+.+.++.|++.|+++.++|+-....+....+.. +.... ..++...+ + . ..
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f-----~~i~~~~~-----------------~-~-~K 118 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYF-----DLILGSDE-----------------F-G-AK 118 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcC-----cEEEecCC-----------------C-C-CC
Confidence 34589999999999999999999999999998888775 33211 11111000 1 1 12
Q ss_pred HHHHHHHHHHHHhCCC--EEEEEcCCccCHHHhhhCC
Q 003371 745 PFDKLLMVQCLKKKGH--VVAVTGDGTNDAPALKEAD 779 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~--vVa~~GDG~NDapALk~Ad 779 (825)
|. ...+.+.+++.|- .+.++||..+|..|-+.|+
T Consensus 119 p~-~~~~~~~~~~~~~~~~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 119 PE-PEIFLAALESLGLPPEVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred cC-HHHHHHHHHHcCCCCCEEEEeCCHHHHHHHHHcc
Confidence 31 2223333333322 6899999999999887763
|
HAD subfamilies caused by an overly broad single model. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.13 Score=53.52 Aligned_cols=110 Identities=23% Similarity=0.325 Sum_probs=71.2
Q ss_pred CCcccHHHHHHHH--HhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeech-hhhcCCHHHHHhhccC-eeEE
Q 003371 665 PCRPGVQKAVEAC--QSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGV-EFRNYTDEERIQKVDK-IRVM 740 (825)
Q Consensus 665 plR~~v~~aI~~l--~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~-~~~~~~~~~~~~~~~~-~~V~ 740 (825)
|+.|+.+++++.| ++.|+.++++|--|..--..|=+.-|+...... +.+-+ .|.. . -...+.|. ..-+
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~-----I~TNpa~~~~-~--G~l~v~pyh~h~C 142 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSE-----IFTNPACFDA-D--GRLRVRPYHSHGC 142 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccce-----EEeCCceecC-C--ceEEEeCccCCCC
Confidence 6779999999999 568999999999999999999999998643211 11111 0100 0 00000000 0123
Q ss_pred EecCH-HHHHHHHHHHHhC----C---CEEEEEcCCccCHH-Hh--hhCCccE
Q 003371 741 ARSSP-FDKLLMVQCLKKK----G---HVVAVTGDGTNDAP-AL--KEADVGL 782 (825)
Q Consensus 741 ar~sP-~dK~~lV~~Lq~~----g---~vVa~~GDG~NDap-AL--k~AdVGi 782 (825)
.++.| .=|..+++.+++. | ..|.++|||.||-. ++ +.+|+-+
T Consensus 143 ~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~ 195 (234)
T PF06888_consen 143 SLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVF 195 (234)
T ss_pred CcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEe
Confidence 35555 4799999888765 4 78999999999964 43 3455544
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.20 E-value=0.23 Score=54.98 Aligned_cols=98 Identities=21% Similarity=0.153 Sum_probs=59.7
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHcCCcccccccccceeeechhhhcCCHH
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGD---------------NVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDE 728 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD---------------~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~ 728 (825)
=++.|++.++++.|+++|+++.++|.- ....+..+.+..|+.-. ...+.. .+. .+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd------~i~i~~-~~~--sd- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFD------EVLICP-HFP--ED- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCcee------eEEEeC-CcC--cc-
Confidence 367899999999999999999999982 23345566777776310 111110 000 00
Q ss_pred HHHhhccCeeEEEecCHHHHHHHHHHH-HhC---CCEEEEEcCCccCHHHhhhCCccEe
Q 003371 729 ERIQKVDKIRVMARSSPFDKLLMVQCL-KKK---GHVVAVTGDGTNDAPALKEADVGLS 783 (825)
Q Consensus 729 ~~~~~~~~~~V~ar~sP~dK~~lV~~L-q~~---g~vVa~~GDG~NDapALk~AdVGia 783 (825)
...+| .|. -.++..+ ++. ...+.|+||+.+|..+-+.|++-..
T Consensus 99 ---------~~~~r-KP~--p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 99 ---------NCSCR-KPK--TGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred ---------cCCCC-CCC--HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 00011 232 2233332 222 3678999999999999999987643
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=93.13 E-value=0.26 Score=47.42 Aligned_cols=96 Identities=20% Similarity=0.227 Sum_probs=59.1
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCcccccccccceeeechhhhcCCHHH
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNV---------------FTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEE 729 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~---------------~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~ 729 (825)
++.||+.++++.|++.|+++.++|.... ..+..+.+.+|+.... ......+..
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~----- 94 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG-------VLFCPHHPA----- 94 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE-------EEECCCCCC-----
Confidence 4689999999999999999999998762 4556677788875210 000000000
Q ss_pred HHhhccCeeEEEecCHHHHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCcc
Q 003371 730 RIQKVDKIRVMARSSPFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVG 781 (825)
Q Consensus 730 ~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~---g~vVa~~GDG~NDapALk~AdVG 781 (825)
.......|.-+ .+-..+++. -+-+.|+||...|..+-+.|++-
T Consensus 95 --------~~~~~~KP~~~-~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 95 --------DNCSCRKPKPG-LILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred --------CCCCCCCCCHH-HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 00000133221 233333333 35689999999999999888764
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=93.07 E-value=0.25 Score=51.00 Aligned_cols=95 Identities=20% Similarity=0.270 Sum_probs=58.2
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHH-HHHHcCCcccccccccceeeech--hhhcCCHHHHHhhccCeeEE
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKA-IATECGILRLDQQVEKGEVVEGV--EFRNYTDEERIQKVDKIRVM 740 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~a-IA~~~GI~~~~~~~~~~~vi~G~--~~~~~~~~~~~~~~~~~~V~ 740 (825)
-++.||+.+.++.|++.|+++.++||-....... ..+..|+... ...++.+. +.
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~-----f~~i~~~~~~~~------------------ 133 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSL-----MHHVVTGDDPEV------------------ 133 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhh-----CCEEEECChhhc------------------
Confidence 3578999999999999999999999987654432 2222233221 11122221 11
Q ss_pred EecCHHHHHHHHHHHHhC------CCEEEEEcCCccCHHHhhhCCccE
Q 003371 741 ARSSPFDKLLMVQCLKKK------GHVVAVTGDGTNDAPALKEADVGL 782 (825)
Q Consensus 741 ar~sP~dK~~lV~~Lq~~------g~vVa~~GDG~NDapALk~AdVGi 782 (825)
.+..|.- ..+...+++. .+-+.|+||...|+.|-+.|++-.
T Consensus 134 ~~~KP~p-~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 134 KQGKPAP-DIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred cCCCCCc-HHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeE
Confidence 1112221 1233333333 356999999999999999998754
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=92.83 E-value=0.45 Score=47.31 Aligned_cols=27 Identities=19% Similarity=0.281 Sum_probs=24.3
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCH
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNV 692 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~ 692 (825)
+.||+.++++.|+++|+++.++|.-+.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 469999999999999999999997663
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=92.83 E-value=0.4 Score=61.04 Aligned_cols=132 Identities=14% Similarity=0.263 Sum_probs=85.5
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc-ccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGIL-RLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~-~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
+.||+.+.++.|+++|+++.++|+-....+..+-+..|+. .. ...++.+.++ .+..
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~-----Fd~iv~~~~~------------------~~~K 218 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSM-----FDAIVSADAF------------------ENLK 218 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhH-----CCEEEECccc------------------ccCC
Confidence 5699999999999999999999999999999998999985 21 1123333222 1223
Q ss_pred HHHH--HHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc---cEecCCCchHHHHHhcCeeeccCCchH--HHHHHHHhHH
Q 003371 745 PFDK--LLMVQCLKKKGHVVAVTGDGTNDAPALKEADV---GLSMGIQGTEVAKESSDIVILDDDFTS--VATVLSPGDQ 817 (825)
Q Consensus 745 P~dK--~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdV---Giamg~~gt~vAk~aaDivlldd~f~s--Iv~~i~~gR~ 817 (825)
|... ....+.+.-..+.+.|+||..+|+.|-+.|++ ++.-+....+.....+|+++- ++.. +..++.-|-.
T Consensus 219 P~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~--~l~el~~~~~~~~~~~ 296 (1057)
T PLN02919 219 PAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRK--DIGNISLSDILTGGSD 296 (1057)
T ss_pred CCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEEC--ChHHCCHHHHHhcCCC
Confidence 3222 22233333234568899999999999999987 232232223444556777775 5554 5555555555
Q ss_pred hhccc
Q 003371 818 LHSGC 822 (825)
Q Consensus 818 i~~ni 822 (825)
.++|.
T Consensus 297 ~~~~~ 301 (1057)
T PLN02919 297 ATPNV 301 (1057)
T ss_pred CCCCc
Confidence 55554
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=92.82 E-value=0.11 Score=50.20 Aligned_cols=92 Identities=15% Similarity=0.016 Sum_probs=64.7
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
-++|||+.+.++.|+ .++++.++|.-+...+..+-+.+|+.... ...++.+.+.. +.
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~----f~~i~~~~d~~------------------~~ 100 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYF----GYRRLFRDECV------------------FV 100 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCE----eeeEEECcccc------------------cc
Confidence 357999999999999 57999999999999999999999874310 11223222221 11
Q ss_pred CHHHHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCccE
Q 003371 744 SPFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVGL 782 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~---g~vVa~~GDG~NDapALk~AdVGi 782 (825)
.|. +.+.++.. -+.+.|+||..+|..|-++|.|-|
T Consensus 101 KP~----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 101 KGK----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPI 138 (148)
T ss_pred CCe----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEe
Confidence 222 44444433 467899999999999888885554
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=92.49 E-value=0.65 Score=57.52 Aligned_cols=38 Identities=5% Similarity=0.042 Sum_probs=32.6
Q ss_pred CCcccHHHHHHHH-HhCCCeEEEEcCCCHHHHHHHHHHc
Q 003371 665 PCRPGVQKAVEAC-QSAGVEIKMITGDNVFTAKAIATEC 702 (825)
Q Consensus 665 plR~~v~~aI~~l-~~aGI~V~mvTGD~~~tA~aIA~~~ 702 (825)
.+-|++.+++++| ++.|+.|.++||....+....-..+
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 5668999999996 7789999999999999998877543
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=91.99 E-value=0.45 Score=44.70 Aligned_cols=39 Identities=5% Similarity=0.075 Sum_probs=35.0
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHcC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGD-NVFTAKAIATECG 703 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD-~~~tA~aIA~~~G 703 (825)
++.||+.+.++.|+++|+++.++|+- ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999999 7777777777776
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=91.91 E-value=0.49 Score=42.48 Aligned_cols=49 Identities=20% Similarity=0.305 Sum_probs=36.9
Q ss_pred eeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHcCCcc
Q 003371 658 GIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIA---TECGILR 706 (825)
Q Consensus 658 G~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA---~~~GI~~ 706 (825)
|++..-+.+=||+.++|+.|+++|++++++|-....+...++ +.+||..
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~ 58 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV 58 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC
Confidence 556667778899999999999999999999998866655555 5577754
|
... |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=91.83 E-value=0.84 Score=47.27 Aligned_cols=89 Identities=18% Similarity=0.180 Sum_probs=56.6
Q ss_pred cCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHH---HHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeE
Q 003371 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAK---AIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRV 739 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~---aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V 739 (825)
+-|.-|++.++++.+++.|++|+++||....... .--++.|+..- ..+++-+..-.
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-----~~LiLR~~~d~---------------- 176 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-----KHLILRGLEDS---------------- 176 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-----CeeeecCCCCC----------------
Confidence 4588899999999999999999999999976532 33345676431 11222211000
Q ss_pred EEecCHHHHHHHHHHHHhCC-CEEEEEcCCccCHH
Q 003371 740 MARSSPFDKLLMVQCLKKKG-HVVAVTGDGTNDAP 773 (825)
Q Consensus 740 ~ar~sP~dK~~lV~~Lq~~g-~vVa~~GDG~NDap 773 (825)
....-.-|...-+.+.+.| .+|+++||-.+|..
T Consensus 177 -~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 177 -NKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred -CchHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 0001112666666676665 57788999999863
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=91.75 E-value=0.55 Score=46.20 Aligned_cols=80 Identities=18% Similarity=0.144 Sum_probs=61.8
Q ss_pred cCCCcccHHHHHHHHHhCCC--eEEEEcCC-------CHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhh
Q 003371 663 KDPCRPGVQKAVEACQSAGV--EIKMITGD-------NVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQK 733 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI--~V~mvTGD-------~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~ 733 (825)
++.+-|+..+.+++|++.+. +|.++|-- +...|.++++.+||.--
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpvl-------------------------- 110 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPVL-------------------------- 110 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcEE--------------------------
Confidence 57788999999999999987 49999986 48899999999998520
Q ss_pred ccCeeEEEecCHHHHHHHHHHHHhC-----CCEEEEEcCC-ccCHH
Q 003371 734 VDKIRVMARSSPFDKLLMVQCLKKK-----GHVVAVTGDG-TNDAP 773 (825)
Q Consensus 734 ~~~~~V~ar~sP~dK~~lV~~Lq~~-----g~vVa~~GDG-~NDap 773 (825)
.+....|.-...+.+.++.+ -+-++|+||- .-|.-
T Consensus 111 -----~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 111 -----RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred -----EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 13335786667888888765 5569999996 23444
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=91.24 E-value=0.61 Score=48.22 Aligned_cols=98 Identities=15% Similarity=0.153 Sum_probs=63.1
Q ss_pred ccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC---CcccccccccceeeechhhhcCCHHHHHhhccCee
Q 003371 662 IKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECG---ILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIR 738 (825)
Q Consensus 662 i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~G---I~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~ 738 (825)
++-++.||+.++++.|+++|+++.++|..+....+.+-+..+ +... ++ ..+. ..
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~---------f~-------------~~fd-~~ 148 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY---------FS-------------GYFD-TT 148 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh---------cc-------------eEEE-eC
Confidence 345789999999999999999999999998887777766653 2110 00 0000 00
Q ss_pred EEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 003371 739 VMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGL 782 (825)
Q Consensus 739 V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGi 782 (825)
+...-.|+-=..+.+.+.-..+.+.|+||...|+.|-++|++-.
T Consensus 149 ~g~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~t 192 (220)
T TIGR01691 149 VGLKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHT 192 (220)
T ss_pred cccCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEE
Confidence 11111222112333333222356899999999999999998854
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.13 E-value=0.35 Score=49.81 Aligned_cols=127 Identities=12% Similarity=0.093 Sum_probs=77.2
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||++++++.| ++++.++|+.....+...=+..|+..... ..++.+.+.. +..
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~----~~v~~~~~~~------------------~~K 142 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFP----DKLFSGYDIQ------------------RWK 142 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCc----ceEeeHHhcC------------------CCC
Confidence 4568999999998 49999999999888888878888865310 1233333221 112
Q ss_pred HHHHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCccEecCC--CchHHHHHhcCeeeccCCchHHHHHHHHhHHhh
Q 003371 745 PFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVGLSMGI--QGTEVAKESSDIVILDDDFTSVATVLSPGDQLH 819 (825)
Q Consensus 745 P~dK~~lV~~Lq~~---g~vVa~~GDG~NDapALk~AdVGiamg~--~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~ 819 (825)
|.- ..+...+++. .+.++|+||..+|..+=++|++....-. ...+.-+..++.++ +++..++..+..+-+.+
T Consensus 143 P~p-~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~ 219 (221)
T PRK10563 143 PDP-ALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPIDHPLVTTF--TDLAQLPELWKARGWDI 219 (221)
T ss_pred CCh-HHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEEECCCCCCcchhhhhhHHH--HHHHHHHHHHHHhcccc
Confidence 211 1222233333 3558999999999999999997764321 12222233344443 36777777666554443
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=90.78 E-value=0.26 Score=51.92 Aligned_cols=70 Identities=20% Similarity=0.197 Sum_probs=51.3
Q ss_pred EEEecCHHHHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhC--------CccEecCCCchHHHHHhcCeeeccCCch
Q 003371 739 VMARSSPFDKLLMVQCLKKK----GHVVAVTGDGTNDAPALKEA--------DVGLSMGIQGTEVAKESSDIVILDDDFT 806 (825)
Q Consensus 739 V~ar~sP~dK~~lV~~Lq~~----g~vVa~~GDG~NDapALk~A--------dVGiamg~~gt~vAk~aaDivlldd~f~ 806 (825)
+-.+..+.+|...++.+.+. ...++++||+.||.+|++.+ ..|++|+ .|. .+..|++++- +..
T Consensus 159 ~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g~--~~~~A~~~~~--~~~ 233 (244)
T TIGR00685 159 VELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SGS--KKTVAKFHLT--GPQ 233 (244)
T ss_pred EEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cCC--cCCCceEeCC--CHH
Confidence 34455677898888887654 34689999999999999999 4788885 332 3556888776 677
Q ss_pred HHHHHHH
Q 003371 807 SVATVLS 813 (825)
Q Consensus 807 sIv~~i~ 813 (825)
.+...+.
T Consensus 234 ~v~~~L~ 240 (244)
T TIGR00685 234 QVLEFLG 240 (244)
T ss_pred HHHHHHH
Confidence 7766654
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=90.70 E-value=0.55 Score=46.08 Aligned_cols=98 Identities=21% Similarity=0.157 Sum_probs=58.6
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHH
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGD---------------NVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEE 729 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD---------------~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~ 729 (825)
++-||+.+++++|++.|+++.++|-- ....+..+-++.|+.- ...++ +..+..
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f------d~ii~-~~~~~~----- 96 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF------DDVLI-CPHFPD----- 96 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce------eEEEE-CCCCCC-----
Confidence 35699999999999999999999974 2345666777777741 01111 100000
Q ss_pred HHhhccCeeEEEecCHHHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEe
Q 003371 730 RIQKVDKIRVMARSSPFDKLLMVQCLKKKG---HVVAVTGDGTNDAPALKEADVGLS 783 (825)
Q Consensus 730 ~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g---~vVa~~GDG~NDapALk~AdVGia 783 (825)
-.+. ...|... .+-..+++.| ..+.|+||+.+|..+-+.|.+-..
T Consensus 97 -------~~~~-~~KP~~~-~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 97 -------DNCD-CRKPKIK-LLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred -------CCCC-CCCCCHH-HHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 0000 1123221 1122233332 458899999999999999987643
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=90.52 E-value=0.37 Score=49.20 Aligned_cols=94 Identities=16% Similarity=0.145 Sum_probs=55.9
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHH--HHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEE
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFT--AKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMA 741 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~t--A~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~a 741 (825)
-++.|++.+.++.|++.|+++.++|...... ........|+.... ..++...+ + .
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f-----d~v~~s~~-----------------~-~ 149 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF-----DAVVESCL-----------------E-G 149 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC-----CEEEEeee-----------------c-C
Confidence 3578999999999999999999999875433 22223334443211 01111100 0 0
Q ss_pred ecCHHHHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCcc
Q 003371 742 RSSPFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVG 781 (825)
Q Consensus 742 r~sP~dK~~lV~~Lq~~---g~vVa~~GDG~NDapALk~AdVG 781 (825)
...|.-. .+-..+++. ...++|+||...|..+-++|++-
T Consensus 150 ~~KP~p~-~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 150 LRKPDPR-IYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred CCCCCHH-HHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 1123322 222333333 35578889999999999999874
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=89.86 E-value=0.96 Score=44.59 Aligned_cols=40 Identities=13% Similarity=0.184 Sum_probs=32.0
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCH------------HHHHHHHHHcCCc
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNV------------FTAKAIATECGIL 705 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~------------~tA~aIA~~~GI~ 705 (825)
+-||+.++++.|+++|+++.++|.-.. ..+..+-+.+|+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 349999999999999999999997543 2456677888874
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=89.36 E-value=1 Score=49.40 Aligned_cols=90 Identities=11% Similarity=0.001 Sum_probs=67.1
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH----cCCcccccccccceeeechhhhcCCHHHHHhhccCeeEE
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATE----CGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVM 740 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~----~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ 740 (825)
++.+++.++++.|++.|+.+.++|.-+...|..+-++ +|+.... ..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f------------------------------~~ 80 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF------------------------------DA 80 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe------------------------------eE
Confidence 4579999999999999999999999999999999988 7775421 01
Q ss_pred EecCHHHHHHHHHHH-HhC---CCEEEEEcCCccCHHHhhhCCccEec
Q 003371 741 ARSSPFDKLLMVQCL-KKK---GHVVAVTGDGTNDAPALKEADVGLSM 784 (825)
Q Consensus 741 ar~sP~dK~~lV~~L-q~~---g~vVa~~GDG~NDapALk~AdVGiam 784 (825)
....+..|...++.+ ++. -.-++|+||...|..+.+.+...+.+
T Consensus 81 ~~~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 81 RSINWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTL 128 (320)
T ss_pred EEEecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCcc
Confidence 112233344444433 333 36789999999999999998887644
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=89.18 E-value=7.2 Score=43.34 Aligned_cols=46 Identities=17% Similarity=0.117 Sum_probs=36.9
Q ss_pred CeEEeeeecccC--CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 003371 653 GLTLLGIVGIKD--PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIA 699 (825)
Q Consensus 653 ~l~llG~v~i~D--plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA 699 (825)
|.||+-++.-.| .+-++.+++|++|. .|+.|.++||........+.
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 456665554333 47799999999999 78999999999999999884
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=88.91 E-value=0.75 Score=50.28 Aligned_cols=48 Identities=17% Similarity=0.292 Sum_probs=39.1
Q ss_pred eeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHcCCc
Q 003371 658 GIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIA---TECGIL 705 (825)
Q Consensus 658 G~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA---~~~GI~ 705 (825)
|++.-.+.+=|++.++|+.|++.|++++++|+....+...++ +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 444444566699999999999999999999999988877777 567764
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=87.14 E-value=1.3 Score=44.73 Aligned_cols=94 Identities=11% Similarity=0.144 Sum_probs=56.6
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-cCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATE-CGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~-~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
++.||+.++++.|++.|+++.++|.-+.......-.. .|+... ...++...++ ...
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~-----fd~v~~s~~~------------------~~~ 140 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA-----ADHIYLSQDL------------------GMR 140 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh-----cCEEEEeccc------------------CCC
Confidence 4789999999999999999999999776654433222 233221 0111111111 111
Q ss_pred CHHHHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCccE
Q 003371 744 SPFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVGL 782 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~---g~vVa~~GDG~NDapALk~AdVGi 782 (825)
.|. ..-+-..+++. .+-+.++||...|..+-++|++-.
T Consensus 141 KP~-p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 141 KPE-ARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred CCC-HHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 232 11222333333 355889999999999999987743
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=86.28 E-value=2.5 Score=42.61 Aligned_cols=94 Identities=15% Similarity=0.140 Sum_probs=55.6
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.++++.|++.+ +..++|.-+..+....-+.+|+...... ....+ +.++..
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~-~f~~i----------------------~~~~~~ 129 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPG-AFSEV----------------------LMCGHD 129 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCC-cccEE----------------------EEeccC
Confidence 46899999999999985 5666676544444445566666421100 00111 122222
Q ss_pred HHHHHHHHHHHHhCC-CEEEEEcCCccCHHHhhhC--CccE
Q 003371 745 PFDKLLMVQCLKKKG-HVVAVTGDGTNDAPALKEA--DVGL 782 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g-~vVa~~GDG~NDapALk~A--dVGi 782 (825)
...+..+...+++.| +.++|+||..+|..|-++| ++-.
T Consensus 130 ~~kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 130 ESKEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred cccHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 212223333444444 4577999999999999999 8853
|
2 hypothetical protein; Provisional |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=84.66 E-value=2 Score=42.82 Aligned_cols=95 Identities=9% Similarity=-0.041 Sum_probs=60.5
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.+++++|+ .++.++|.-+...+..+.+..|+.... ..++.+.+.... .....
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f-----d~i~~~~~~~~~--------------~~~~K 141 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF-----DGIFCFDTANPD--------------YLLPK 141 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh-----CeEEEeecccCc--------------cCCCC
Confidence 46799999999997 478999999999999999999985421 112222111100 00023
Q ss_pred HHHH--HHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc
Q 003371 745 PFDK--LLMVQCLKKKGHVVAVTGDGTNDAPALKEADVG 781 (825)
Q Consensus 745 P~dK--~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVG 781 (825)
|... ..+++.+....+.+.|+||...|..+=++|++-
T Consensus 142 P~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 142 PSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred CCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCE
Confidence 4222 222333333345688999999999998888654
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=83.38 E-value=3 Score=41.50 Aligned_cols=89 Identities=19% Similarity=0.219 Sum_probs=58.9
Q ss_pred cccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHH
Q 003371 667 RPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPF 746 (825)
Q Consensus 667 R~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~ 746 (825)
-|+ .+.++.+++. +++.++||.....+..+-+..|+.... ..++.+.+.. +..|.
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f-----d~i~~~~~~~------------------~~KP~ 144 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF-----DAVVAADDVQ------------------HHKPA 144 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc-----eEEEehhhcc------------------CCCCC
Confidence 354 5889999865 899999999999999999999986521 2233322221 11222
Q ss_pred HHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCcc
Q 003371 747 DKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVG 781 (825)
Q Consensus 747 dK~~lV~~Lq~~---g~vVa~~GDG~NDapALk~AdVG 781 (825)
.. -+...+++. ...+.|+||..+|+.+-++|++-
T Consensus 145 p~-~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 145 PD-TFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred hH-HHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 21 122333333 34477899999999999999764
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=83.28 E-value=1.7 Score=44.09 Aligned_cols=114 Identities=22% Similarity=0.311 Sum_probs=71.2
Q ss_pred CCcccHHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHcCCcccccc---------cccceeeechhhhcCCHHHHHhhc
Q 003371 665 PCRPGVQKAVEACQSAGV-EIKMITGDNVFTAKAIATECGILRLDQQ---------VEKGEVVEGVEFRNYTDEERIQKV 734 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI-~V~mvTGD~~~tA~aIA~~~GI~~~~~~---------~~~~~vi~G~~~~~~~~~~~~~~~ 734 (825)
|+-|+..++|+.+++.|- .++++|--|..--..+-+..||..-... ..+.+.+.- +
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~p-----y--------- 149 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRP-----Y--------- 149 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeec-----C---------
Confidence 667999999999999997 9999999999888888888887531100 000111100 0
Q ss_pred cCeeEEEecCHH-HHHHHHHHHHhC-------CCEEEEEcCCccC-HHHhhhCCccEecCCCchHHH
Q 003371 735 DKIRVMARSSPF-DKLLMVQCLKKK-------GHVVAVTGDGTND-APALKEADVGLSMGIQGTEVA 792 (825)
Q Consensus 735 ~~~~V~ar~sP~-dK~~lV~~Lq~~-------g~vVa~~GDG~ND-apALk~AdVGiamg~~gt~vA 792 (825)
..-.=+.||-|. =|..++..++.. -+.+..+|||.|| +|.++...--+||-..|=++=
T Consensus 150 H~~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl~ 216 (256)
T KOG3120|consen 150 HTQHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPLW 216 (256)
T ss_pred CCCCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCchH
Confidence 000112333332 366666555433 2378899999999 466666665666655555543
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=81.66 E-value=14 Score=39.57 Aligned_cols=49 Identities=14% Similarity=0.247 Sum_probs=35.8
Q ss_pred eeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHH---HHHHcCCcc
Q 003371 658 GIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKA---IATECGILR 706 (825)
Q Consensus 658 G~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~a---IA~~~GI~~ 706 (825)
|++.-.+.+=|++.++|+.|++.|++++.+|+....+... --+++|+..
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~ 62 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNG 62 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 3444456677899999999999999999999976443333 335578753
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=80.14 E-value=13 Score=36.22 Aligned_cols=103 Identities=17% Similarity=0.180 Sum_probs=69.0
Q ss_pred cCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHc-----CCcccccccccceeee-chhhhcCCHHHHHhh
Q 003371 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIA---TEC-----GILRLDQQVEKGEVVE-GVEFRNYTDEERIQK 733 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA---~~~-----GI~~~~~~~~~~~vi~-G~~~~~~~~~~~~~~ 733 (825)
+|-.++|+.+.++..++.|.++.-+|+...--|...- .+. ++.. +.+.++ ...+..+..
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~------Gpv~~sP~~l~~al~r------ 92 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPD------GPVLLSPDSLFSALHR------ 92 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCC------CCEEECCcchhhhhhc------
Confidence 3799999999999999999999999999865554332 222 3221 112221 111111111
Q ss_pred ccCeeEEEecCHHHHHHHHHHHHhC-----CCEEEEEcCCccCHHHhhhCCcc
Q 003371 734 VDKIRVMARSSPFDKLLMVQCLKKK-----GHVVAVTGDGTNDAPALKEADVG 781 (825)
Q Consensus 734 ~~~~~V~ar~sP~dK~~lV~~Lq~~-----g~vVa~~GDG~NDapALk~AdVG 781 (825)
.|..+-.-+.|....+.|+.. ...+|..|...+|+.|.++++|-
T Consensus 93 ----Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 93 ----EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ----cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 145555567898888888864 56778899999999999987553
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 825 | ||||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 2e-60 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 2e-60 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 3e-60 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 4e-60 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 2e-59 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 5e-57 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 3e-56 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 1e-42 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 2e-33 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 3e-32 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 1e-15 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 3e-15 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 3e-15 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 3e-13 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 3e-13 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 3e-13 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 3e-13 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 2e-12 | ||
| 2voy_I | 128 | Cryoem Model Of Copa, The Copper Transporting Atpas | 3e-07 | ||
| 2hc8_A | 113 | Structure Of The A. Fulgidus Copa A-Domain Length = | 4e-05 | ||
| 2yj4_A | 263 | Conformational Changes In The Catalytic Domain Of T | 1e-04 | ||
| 2yj3_A | 263 | Conformational Changes In The Catalytic Domain Of T | 1e-04 | ||
| 2iye_A | 263 | Structure Of Catalytic Cpx-atpase Domain Copb-b Len | 2e-04 |
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 128 | Back alignment and structure |
|
| >pdb|2HC8|A Chain A, Structure Of The A. Fulgidus Copa A-Domain Length = 113 | Back alignment and structure |
|
| >pdb|2YJ4|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2YJ3|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2IYE|A Chain A, Structure Of Catalytic Cpx-atpase Domain Copb-b Length = 263 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 825 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-180 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-177 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 1e-176 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 1e-154 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 1e-152 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 1e-32 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 2e-31 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 2e-09 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 6e-31 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 2e-30 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-29 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 7e-10 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-28 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 3e-11 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 2e-23 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 1e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-07 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 2e-07 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 2e-05 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 2e-04 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 2e-04 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 9e-04 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 543 bits (1402), Expect = e-180
Identities = 192/799 (24%), Positives = 320/799 (40%), Gaps = 82/799 (10%)
Query: 60 SHDYIALDVEPEPSSSHDEANKLVSNSIDPDMDGIRLAEMVK--NKDSHTLSLLGGVEGV 117
+++ +++ P PS +L M K + H LS V +
Sbjct: 6 NYELYQVELGPGPSGDMAAKMSKKKAGRGGGKRKEKLENMKKEMEINDHQLS----VAEL 61
Query: 118 ANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAA 177
T+ G++ + G N P ++ V AA
Sbjct: 62 EQKYQTSATKGLS--ASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAA 119
Query: 178 LSLGFGIKEHGAEEG-----WYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIK 232
+ L + + Y ++ V + + F+ + +
Sbjct: 120 ICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQ-Q 178
Query: 233 VEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVE-- 290
V+R+ + QI+ LVVGD+V +K GD++PAD L +VD SS+TGES+
Sbjct: 179 ATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQGRKVDNSSLTGESEPQTRS 238
Query: 291 VDSTNNPFL------FSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARL 344
+ T+ L F + +G AQ LVV+ G T G + S S NE+TP+ +
Sbjct: 239 PECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEKTPIAIEI 298
Query: 345 DKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAA 404
+ I + + +V + ++IV A
Sbjct: 299 EHFVDIIAGLAILFGATFFIVAMCI------------------GYTFLRAMVFFMAIVVA 340
Query: 405 AVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTL 464
+PEGL VT+ L+ + KR+ + +V+ L A ET+GS +VIC+DKTGTLT
Sbjct: 341 Y-------VPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQ 393
Query: 465 NQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSV----SKLKPGSSVAEFS 520
N+M V+ W +T + D + + K G
Sbjct: 394 NRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVP 453
Query: 521 -----GSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTH 575
G +E A+L ++++ + FNS K + +
Sbjct: 454 KRIVIGDASETALLK-FSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPR 512
Query: 576 --IHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVS 633
+ KGA E +L CS G +D R + + R + F +S
Sbjct: 513 HVLVMKGAPERVLERCSSIL-IKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLS 571
Query: 634 EEETAYNNDVKARQR-LKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNV 692
E++ GL+ G+V + DP R V AV C++AG+ + M+TGD+
Sbjct: 572 EKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHP 631
Query: 693 FTAKAIATECGILRLDQQV-------------------EKGEVVEGVEFRNYTDEERIQK 733
TAKAIA GI+ + + V+ G++ ++ E ++
Sbjct: 632 ITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEA 691
Query: 734 VDKIR--VMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEV 791
+ V AR+SP KL++V+ ++ G +VAVTGDG ND+PALK+AD+G++MGI G++
Sbjct: 692 LRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDA 751
Query: 792 AKESSDIVILDDDFTSVAT 810
AK ++D+++LDD+F S+ T
Sbjct: 752 AKNAADMILLDDNFASIVT 770
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 537 bits (1387), Expect = e-177
Identities = 197/792 (24%), Positives = 339/792 (42%), Gaps = 85/792 (10%)
Query: 67 DVEPEPSSSHDEANKLVSNSIDPDMDGIRLAEMVKNKDSHTLSLLGGVEGVANALGTNPE 126
+ ++ K + ID D L + V D H LS ++ + N GT+
Sbjct: 11 EPAATSENATKSKKKGKKDKIDKKRDLDELKKEVSMDD-HKLS----LDELHNKYGTDLT 65
Query: 127 YGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALS-LGFGIK 185
G+ + G N+ PP ++L + A L L +GI+
Sbjct: 66 RGLT--NARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQ 123
Query: 186 EHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIK------VEVVREA 239
+E + + V + V++V+ ++ Q K S+I ++ K V+R+
Sbjct: 124 AATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEA---KSSRIMDSFKNMVPQQALVIRDG 180
Query: 240 RRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVE--VDSTNNP 297
+ I+ +V GD+V +K GD+IPAD + H +VD SS+TGES+ + ++
Sbjct: 181 EKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSEN 240
Query: 298 FL------FSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTI 351
L F + +G A+ +VV G T G + + S RTP+ ++ I
Sbjct: 241 PLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVGRTPIAIEIEHFIHII 300
Query: 352 GKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVV 411
V + + ++ L + ++ I+ A
Sbjct: 301 TGVAVFLGVSFFILSLIL------------------GYSWLEAVIFLIGIIVAN------ 336
Query: 412 AIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTK 471
+PEGL VT+ L + KRM +V+ L A ET+GS + IC+DKTGTLT N+M V
Sbjct: 337 -VPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAH 395
Query: 472 FWLGQESI-------VQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFS--GS 522
W + S+ + L + + + S G
Sbjct: 396 MWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGD 455
Query: 523 PTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTH--IHWKG 580
+E A+L + + ++ + + FNS K + + + + + KG
Sbjct: 456 ASESALLK-CIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKG 514
Query: 581 AAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYN 640
A E IL CS NG + + + + +N + R + F + + E++
Sbjct: 515 APERILDRCSTIL-LNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEG 573
Query: 641 NDVKARQR-LKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIA 699
A + L +G++ + DP R V AV C+SAG+++ M+TGD+ TAKAIA
Sbjct: 574 YPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIA 633
Query: 700 TECGILRLDQQV-------------------EKGEVVEGVEFRNYTDEERIQKVDKIR-- 738
GI+ + K VV G + ++ + E +
Sbjct: 634 KGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILHYHTEI 693
Query: 739 VMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDI 798
V AR+SP KL++V+ +++G +VAVTGDG ND+PALK+AD+G++MGI G++V+K+++D+
Sbjct: 694 VFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADM 753
Query: 799 VILDDDFTSVAT 810
++LDD+F S+ T
Sbjct: 754 ILLDDNFASIVT 765
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 532 bits (1372), Expect = e-176
Identities = 208/777 (26%), Positives = 333/777 (42%), Gaps = 99/777 (12%)
Query: 103 KDSHTLSLLGGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLE 162
+ +H+ S E G + G+ + V R + +G N K L V+E
Sbjct: 3 EAAHSKS----TEECLAYFGVSETTGLT--PDQVKRHLEKYGHNELPAEEGKSLWELVIE 56
Query: 163 AFKDTTILILLVCAALSLGFGIKEHGAEEG--WYEGGSIFVAVFLVIVVSAFSNFRQARQ 220
F+D + ILL+ A +S E G E + E I + + +V +
Sbjct: 57 QFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENA 116
Query: 221 FDKLSKISNNIKVEVVREARRLQISI--FDLVVGDIVFLKIGDQIPADG--LFLDGHSLQ 276
+ L + +V R R+ I D+V GDIV + +GD++PAD L + +L+
Sbjct: 117 IEALKEYEPE-MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLR 175
Query: 277 VDESSMTGESDHVE-----VDSTNNPF------LFSGSKVADGYAQMLVVSVGMNTAWGE 325
VD+S +TGES V V LFSG+ +A G A +V + G++T G+
Sbjct: 176 VDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGK 235
Query: 326 MMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYN 385
+ +++ ++TPLQ +LD+ + KV + V ++ + + G
Sbjct: 236 IRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGG-------- 287
Query: 386 GSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPAC 445
F V++ AA IPEGLP +T LA +RM A+VR LP+
Sbjct: 288 SWIRGAIYYFKIAVALAVAA-------IPEGLPAVITTCLALGTRRMAKKNAIVRSLPSV 340
Query: 446 ETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTG 505
ET+G +VIC+DKTGTLT NQM V K ++ + S+ + G G
Sbjct: 341 ETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDF------CSLNEFSITGSTYAPEG 394
Query: 506 SV---------------------------SKLKPGSSVAEFS--GSPTEKAVLSWA---- 532
V S L + + G TE A+ +
Sbjct: 395 EVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMN 454
Query: 533 -----------VLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTH----IH 577
V ++Q F+ ++K V + +
Sbjct: 455 VFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMF 514
Query: 578 WKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIH--GMAASSLRCIAFAYKQVSEE 635
KGA E ++ C++ M G + ++ ++I G +LRC+A A + +
Sbjct: 515 VKGAPEGVIDRCNYVR-VGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPK 573
Query: 636 ETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTA 695
D +R E LT +G+VG+ DP R V +++ C+ AG+ + MITGDN TA
Sbjct: 574 REEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTA 633
Query: 696 KAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCL 755
AI GI +++V G EF + E+ + + AR P K +V+ L
Sbjct: 634 IAICRRIGIFGENEEVA-DRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYL 692
Query: 756 KKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTS-VATV 811
+ + A+TGDG NDAPALK+A++G++MG GT VAK +S++V+ DD+F++ VA V
Sbjct: 693 QSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAV 748
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 472 bits (1216), Expect = e-154
Identities = 159/710 (22%), Positives = 290/710 (40%), Gaps = 93/710 (13%)
Query: 101 KNKDSHTLSLLGGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFV 160
+ D + +E V L + E G+ ++ R Q+FG N + LL F
Sbjct: 10 ETVDLEKIP----IEEVFQQLKCSRE-GLT--TQEGEDRIQIFGPNKLEEKKESKLLKF- 61
Query: 161 LEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQ 220
L + ++ + A +++ + G W + I + + +S
Sbjct: 62 LGFMWNPLSWVMEMAAIMAIALANGD-GRPPDWQDFVGIICLLVINSTISFIEENNAGNA 120
Query: 221 FDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDES 280
L K +V+R+ + + LV GDIV +K+GD IPAD L+G L+VD+S
Sbjct: 121 AAALMAGLAP-KTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQS 179
Query: 281 SMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPL 340
++TGES V +FSGS G + +V++ G++T +G+ + S +N+
Sbjct: 180 ALTGESLPVTKHPGQ--EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHF 236
Query: 341 QARLDKLTSTIGKV--GLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAV 398
Q L IG +V+ +++ D + +
Sbjct: 237 QKVLTA----IGNFCICSIAIGMVIEIIVMYPIQRR---------------KYRDGIDNL 277
Query: 399 VSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDK 458
+ ++ + IP +P +++T+A R+ A+ +++ A E M V+C+DK
Sbjct: 278 LVLL-------IGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 330
Query: 459 TGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAE 518
TGTLTLN++ V K + ++F +GV + + + +S E
Sbjct: 331 TGTLTLNKLSVDKNLV------------------EVFCKGVEKDQVLLFAAM---ASRVE 369
Query: 519 FSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHW 578
+ + A++ M + + + +H FN KR+ + H
Sbjct: 370 -NQDAIDA-----AMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDG-SGNWHRVS 422
Query: 579 KGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETA 638
KGA E IL + + ++ +II A LR +A A + V E+
Sbjct: 423 KGAPEQILELA-----------KASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKE 471
Query: 639 YNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAI 698
+G++ + DP R + + + GV +KMITGD + K
Sbjct: 472 SP----------GAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKET 521
Query: 699 ATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKK 758
G+ ++ + N + ++K A P K +V+ L+++
Sbjct: 522 GRRLGM--GTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQER 579
Query: 759 GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSV 808
H+V +TGDG NDAPALK+AD+G+++ T+ A+ +SDIV+ + + +
Sbjct: 580 KHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVI 628
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 469 bits (1208), Expect = e-152
Identities = 161/688 (23%), Positives = 278/688 (40%), Gaps = 95/688 (13%)
Query: 120 ALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALS 179
L T+ G+ E+V +R + +G N + L F L F ++ A L+
Sbjct: 79 MLQTDTRVGLT--SEEVVQRRRKYGLNQMKEEKENHFLKF-LGFFVGPIQFVMEGAAVLA 135
Query: 180 LGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREA 239
G W + G I + L VV F+ D+L K K V+R+
Sbjct: 136 AGLE--------DWVDFGVICGLLLLNAVVGFVQEFQAGSIVDELKKTLAL-KAVVLRDG 186
Query: 240 RRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHS-LQVDESSMTGESDHVEVDSTNNPF 298
+I ++V GDI+ ++ G IPADG + + LQVD+S++TGES V+ +
Sbjct: 187 TLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTGESLAVDKHKGDQ-- 244
Query: 299 LFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAV 358
+F+ S V G A +++ + G NT G + +++ S L+ + + + + V
Sbjct: 245 VFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLIL---V 301
Query: 359 AFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLP 418
F +L+V ++ ++ N +V I+ + I ++ +P GLP
Sbjct: 302 IFTLLIVWVSSFYRSN----------------------PIVQILEFTLAITIIGVPVGLP 339
Query: 419 LAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQES 478
VT T+A + +A+V+KL A E++ ++C+DKTGTLT N++ + +
Sbjct: 340 AVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGV 399
Query: 479 IVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGM 538
DL L +S + +KA L +
Sbjct: 400 -----------DPEDLMLTAC-LA-----------ASRKKKGIDAIDKAFLKSL--KYYP 434
Query: 539 EMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGV 598
V KY +L F+ K+ ++ KGA +L
Sbjct: 435 RAKSVLSKYKVLQFHPFDPVSKKVVAVVE-SPQGERITCVKGAPLFVLKTVEE------- 486
Query: 599 IKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLG 658
+ +N + A R + A K+ E +LG
Sbjct: 487 DHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG------------------EGSWEILG 528
Query: 659 IVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVE 718
I+ DP R K V ++ G+ IKM+TGD V A+ + + G+ + E +
Sbjct: 529 IMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGL---GTNIYNAERLG 585
Query: 719 GVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEA 778
+ E V+ A P K +V+ L+++G++VA+TGDG NDAP+LK+A
Sbjct: 586 LGGGGDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKA 645
Query: 779 DVGLSMGIQGTEVAKESSDIVILDDDFT 806
D G+++ ++ A+ ++DIV L
Sbjct: 646 DTGIAVE-GSSDAARSAADIVFLAPGLG 672
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 1e-32
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 33/157 (21%)
Query: 656 LLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGE 715
+ I D RP ++ +E ++ G++I +++GD K ++ E I
Sbjct: 127 PIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNI----------- 175
Query: 716 VVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPAL 775
E + SP DK+ +++ LK+ G+ V + GDG NDA AL
Sbjct: 176 -----------QE----------YYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAAL 214
Query: 776 KEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVL 812
ADV ++MG G +++K +DI+++ +D ++ ++
Sbjct: 215 ALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLI 250
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 2e-31
Identities = 53/173 (30%), Positives = 84/173 (48%), Gaps = 42/173 (24%)
Query: 647 QRLKEEGLT---------LLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKA 697
L+ +G + + ++ ++DP + + + Q +G+EI M+TGD+ TA+A
Sbjct: 527 DELRGKGASVMFMAVDGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEA 586
Query: 698 IATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKK 757
+A GI + V+A P DK +V LK
Sbjct: 587 VAGTLGI----------------------KK----------VVAEIMPEDKSRIVSELKD 614
Query: 758 KGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVAT 810
KG +VA+ GDG NDAPAL +AD+G++MG GT+VA ES+ + +L D +A
Sbjct: 615 KGLIVAMAGDGVNDAPALAKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAK 666
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 60.3 bits (147), Expect = 2e-09
Identities = 57/260 (21%), Positives = 101/260 (38%), Gaps = 70/260 (26%)
Query: 235 VVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDST 294
+ + ++S+ ++ VGD++ ++ G++IP DG +G S VDES +TGE + V
Sbjct: 230 IKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSF-VDESMVTGEP--IPVAKE 286
Query: 295 NNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKV 354
+ + + G M + VG +T ++ +S R P+Q D ++
Sbjct: 287 ASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGW---- 342
Query: 355 GLAVAFLVLVVLLAR------YFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTI 408
F+ V+L+A G A+ + AAV++
Sbjct: 343 -----FVPAVILVAVLSFIVWALLGPQ--------------------PALSYGLIAAVSV 377
Query: 409 VVVAIP--EGL--PLAVTLTLAYSMKRMMTDQAMV------------RKLPACETMGSAT 452
+++A P GL P+++ MV + A E M
Sbjct: 378 LIIACPCALGLATPMSI----------------MVGVGKGAQSGVLIKNAEALERMEKVN 421
Query: 453 VICTDKTGTLTLNQMKVTKF 472
+ DKTGTLT K+T+
Sbjct: 422 TLVVDKTGTLTEGHPKLTRI 441
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 6e-31
Identities = 53/175 (30%), Positives = 91/175 (52%), Gaps = 43/175 (24%)
Query: 647 QRLKEEGLT---------LLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKA 697
++LK++G T + G++ + D RP ++A+ ++ G++ M+TGDN F AK
Sbjct: 117 EKLKQQGKTVVFILKNGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKW 176
Query: 698 IATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKK 757
+A E G+ D+ A P +K V+ + +
Sbjct: 177 VAEELGL----------------------DD----------YFAEVLPHEKAEKVKEV-Q 203
Query: 758 KGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVL 812
+ +V A+ GDG NDAPAL +ADVG+++G GT+VA E++DIV++ +D VA ++
Sbjct: 204 QKYVTAMVGDGVNDAPALAQADVGIAIG-AGTDVAVETADIVLVRNDPRDVAAIV 257
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 2e-30
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 43/176 (24%)
Query: 644 KARQRLKEEGLT---------LLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFT 694
A ++L+ E T + GI+ + D + + AV+ + G+++ MITGDN +
Sbjct: 133 LALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRS 192
Query: 695 AKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQC 754
A+AI+ E + D V+A P K V+
Sbjct: 193 AEAISRELNL----------------------DL----------VIAEVLPHQKSEEVKK 220
Query: 755 LKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVAT 810
L + VVA GDG NDAPAL +AD+G+++G G++VA ES DIV++ DD V
Sbjct: 221 L-QAKEVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVA 274
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 123 bits (312), Expect = 2e-29
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 43/176 (24%)
Query: 644 KARQRLKEEGLT---------LLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFT 694
A ++L+ E T + GI+ + D + + AV+ + G+++ MITGDN +
Sbjct: 427 LALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRS 486
Query: 695 AKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQC 754
A+AI+ E + D V+A P K V+
Sbjct: 487 AEAISRELNL----------------------DL----------VIAEVLPHQKSEEVKK 514
Query: 755 LKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVAT 810
L+ VVA GDG NDAPAL +AD+G+++G G++VA ES DIV++ DD V
Sbjct: 515 LQA-KEVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVA 568
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 61.8 bits (151), Expect = 7e-10
Identities = 58/251 (23%), Positives = 99/251 (39%), Gaps = 53/251 (21%)
Query: 235 VVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDST 294
V+R+ + + + + ++ VGDIV ++ G++IP DG+ ++G S VDES ++GE V V +
Sbjct: 137 VIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEP--VPVLKS 193
Query: 295 NNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKV 354
+F + G ++ VG T +++ + + P+Q DK+ +
Sbjct: 194 KGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPT 253
Query: 355 GLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIP 414
L VA + + YF + + A + ++VVA P
Sbjct: 254 VLLVA---ISAFIYWYFIAH-----------------APLLFAFT----TLIAVLVVACP 289
Query: 415 EGLPLAVTLTLAYSMKRMMTDQA-MV------------RKLPACETMGSATVICTDKTGT 461
LA T A V + A E T + DKTGT
Sbjct: 290 CAFGLA-------------TPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGT 336
Query: 462 LTLNQMKVTKF 472
LT + +VT
Sbjct: 337 LTKGKPEVTDL 347
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 1e-28
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 43/176 (24%)
Query: 644 KARQRLKEEGLT---------LLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFT 694
A ++L+ E T + GI+ + D + + AV+ + G+++ MITGDN +
Sbjct: 505 LALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRS 564
Query: 695 AKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQC 754
A+AI+ E + D V+A P K V+
Sbjct: 565 AEAISRELNL----------------------DL----------VIAEVLPHQKSEEVKK 592
Query: 755 LKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVAT 810
L + VVA GDG NDAPAL +AD+G+++G G++VA ES DIV++ DD V
Sbjct: 593 L-QAKEVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVA 646
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 66.0 bits (162), Expect = 3e-11
Identities = 58/249 (23%), Positives = 99/249 (39%), Gaps = 53/249 (21%)
Query: 235 VVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDST 294
V+R+ + + + + ++ VGDIV ++ G++IP DG+ ++G S VDES ++GE V V +
Sbjct: 215 VIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEP--VPVLKS 271
Query: 295 NNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKV 354
+F + G ++ VG T +++ + + P+Q DK+ +
Sbjct: 272 KGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPT 331
Query: 355 GLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIP 414
L VA + + YF + + A + ++VVA P
Sbjct: 332 VLLVA---ISAFIYWYFIAH-----------------APLLFAFT----TLIAVLVVACP 367
Query: 415 EGLPLAVTLTLAYSMKRMMTDQA-MV------------RKLPACETMGSATVICTDKTGT 461
LA T A V + A E T + DKTGT
Sbjct: 368 CAFGLA-------------TPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGT 414
Query: 462 LTLNQMKVT 470
LT + +VT
Sbjct: 415 LTKGKPEVT 423
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 96.5 bits (241), Expect = 2e-23
Identities = 30/145 (20%), Positives = 53/145 (36%), Gaps = 12/145 (8%)
Query: 521 GSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKG 580
+ + AVL + ++ + F+ E++R V++ + KG
Sbjct: 33 KNLLDTAVLEGT---DEESARSLASRWQKIDEIPFDFERRRMSVVVAEN-TEHHQLVCKG 88
Query: 581 AAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYN 640
A + IL +CS NG I +D +++ + + LR +A A K + E Y
Sbjct: 89 ALQEILNVCSQVRH-NGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQ 147
Query: 641 NDVKARQRLKEEGLTLLGIVGIKDP 665
E L L G + D
Sbjct: 148 RAD-------ESDLILEGYIAFLDH 165
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 55.6 bits (135), Expect = 1e-09
Identities = 21/56 (37%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 235 VVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVE 290
V+R+ + + + + ++ VGDIV ++ G++IP DG+ ++G S VDES ++GE V
Sbjct: 16 VIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVL 70
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.9 bits (131), Expect = 1e-07
Identities = 65/370 (17%), Positives = 114/370 (30%), Gaps = 112/370 (30%)
Query: 536 MGMEMDKVKQKYS-ILHV--ETF-------NSEKKRSGVLIRRKADNTTHIHWKGAAE-- 583
M E + + +Y IL V + F + + +L + + D HI A
Sbjct: 7 MDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEID---HIIMSKDAVSG 63
Query: 584 ---IILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYN 640
+ + S + V K ++ + I + S I +Q S Y
Sbjct: 64 TLRLFWTLLS--KQEEMVQKFVEE-----VLRINYKFLMSP---IKTEQRQPSMMTRMYI 113
Query: 641 -------NDV---------------KARQRLKE----EGLTLLGIVGIKDPCRPGVQK-- 672
ND K RQ L E + + + G++G G K
Sbjct: 114 EQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGS------G--KTW 165
Query: 673 -AVEACQSAGVEIKMITGDNVF--TAKAIATECGIL----RLDQQVEKGEVVEGVEFRNY 725
A++ C S V+ KM +F K + +L +L Q++ N
Sbjct: 166 VALDVCLSYKVQCKM--DFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI 223
Query: 726 TDEERIQKV-DKIRVMARSSPFDKLLMV---------------QCLKKKGHVVAVTGDG- 768
+ RI + ++R + +S P++ L+V C K ++ T
Sbjct: 224 --KLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSC-K----ILLTTRFKQ 276
Query: 769 -TNDAPALKEADVGLSMGIQG-TEVAKESSDIV--ILD---DDFTSVATVLSP------G 815
T+ A + L T E ++ LD D +P
Sbjct: 277 VTDFLSAATTTHISLDHHSMTLTP--DEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIA 334
Query: 816 DQLHSGCFCW 825
+ + G W
Sbjct: 335 ESIRDGLATW 344
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 49.4 bits (119), Expect = 2e-07
Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 243 QISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGES 286
Q+ + + GDI+ + G + P DG ++GHS VDES +TGE+
Sbjct: 36 QVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITGEA 78
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 2e-05
Identities = 14/123 (11%), Positives = 31/123 (25%), Gaps = 20/123 (16%)
Query: 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGIL------RLDQQVEKGEVVE 718
R G ++ V + +I+G F + + +
Sbjct: 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHAS--FDNDYIHI 134
Query: 719 GVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEA 778
K V+ + + +++ + GD D A K +
Sbjct: 135 DWPHSCKGTCSNQCGCCKPSVIH-----------ELSEPNQYIIMI-GDSVTDVEAAKLS 182
Query: 779 DVG 781
D+
Sbjct: 183 DLC 185
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 25/153 (16%), Positives = 48/153 (31%), Gaps = 27/153 (17%)
Query: 668 PGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGI-------LRLDQQVEKGEVVEGV 720
G + V A + ++ +G + L ++ G V +
Sbjct: 78 EGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVENDALNGLVTGHM 137
Query: 721 EFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADV 780
F + K + + V+ R K + + V GDG ND K A
Sbjct: 138 MFSHS-------KGEMLLVLQRLLNISK----------TNTLVV-GDGANDLSMFKHA-- 177
Query: 781 GLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813
+ + EV K+ + I + D + ++
Sbjct: 178 HIKIAFNAKEVLKQHATHCINEPDLALIKPLIE 210
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 22/153 (14%), Positives = 48/153 (31%), Gaps = 27/153 (17%)
Query: 668 PGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGI-------LRLDQQVEKGEVVEGV 720
PG+ + ++ G + +I+G + + + + + V + +
Sbjct: 182 PGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPI 241
Query: 721 EFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADV 780
K + +A +++A GDG ND P L+ A
Sbjct: 242 MNAAN-------KKQTLVDLAARLNIAT----------ENIIAC-GDGANDLPMLEHA-- 281
Query: 781 GLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813
G + + V +E I F + ++
Sbjct: 282 GTGIAWKAKPVVREKIHHQINYHGFELLLFLIE 314
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 9e-04
Identities = 25/153 (16%), Positives = 51/153 (33%), Gaps = 27/153 (17%)
Query: 668 PGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGI-------LRLDQQVEKGEVVEGV 720
P + + V + G ++ + +G + + + + + L + G+V+ V
Sbjct: 181 PELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEV 240
Query: 721 EFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADV 780
K D + +A+ + + VAV GDG ND + A
Sbjct: 241 VSAQT-------KADILLTLAQQYDVE----------IHNTVAV-GDGANDLVMMAAA-- 280
Query: 781 GLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813
GL + + + + V +LS
Sbjct: 281 GLGVAYHAKPKVEAKAQTAVRFAGLGGVVCILS 313
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 825 | |||
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.93 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.94 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.92 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.91 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.9 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.84 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.83 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.3 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.24 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.21 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.17 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.15 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.08 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.07 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.07 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.01 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.91 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.88 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.84 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.84 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.77 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.74 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.71 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.69 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.68 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.65 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.63 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.62 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.59 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.57 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.55 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.55 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.55 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.55 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.53 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.53 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.48 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.46 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.4 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.36 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.35 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.32 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.3 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.27 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.27 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.23 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.21 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.21 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.2 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.19 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.19 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.18 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.15 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.15 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.13 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.09 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.07 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.07 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.06 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.02 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.01 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 97.99 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 97.98 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 97.98 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 97.97 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 97.97 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 97.96 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 97.95 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.94 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.93 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 97.93 | |
| 4aqr_D | 57 | Calcium-transporting ATPase 8, plasma membrane-TY; | 97.92 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.92 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 97.9 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.9 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.87 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.83 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.8 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.8 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.79 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.76 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.73 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.72 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.68 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.68 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.65 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.65 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.62 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.61 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.61 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.59 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.55 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.53 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.52 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.48 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.46 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.42 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.42 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.37 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.36 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.34 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.32 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.32 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.31 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.29 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.24 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.23 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.21 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 97.06 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.93 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 96.91 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.78 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.59 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.56 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 96.56 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 96.5 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 96.35 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 96.34 | |
| 2l1w_B | 26 | Vacuolar calcium ATPase BCA1 peptide; calmodulin, | 96.33 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 96.33 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.31 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 96.08 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.07 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 95.97 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 95.94 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 95.75 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 95.43 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 95.35 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 94.91 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 94.81 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 94.55 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 94.42 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 94.38 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 94.24 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 94.03 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 93.9 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 93.65 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 93.58 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 93.13 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 89.92 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 89.63 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 87.54 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 87.02 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 86.84 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 83.26 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 81.47 |
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-113 Score=1065.72 Aligned_cols=681 Identities=27% Similarity=0.397 Sum_probs=572.8
Q ss_pred CHHHHHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhhcccc-----C
Q 003371 113 GVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKE-----H 187 (825)
Q Consensus 113 gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g~~~-----~ 187 (825)
.++++++.|+++..+||++++ +.+|+++||+|++++++++++|..++++|.++++++|++++++|++++... +
T Consensus 52 ~~~~~~~~l~t~~~~GLs~~e--~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~ 129 (1028)
T 2zxe_A 52 SLDELHNKYGTDLTRGLTNAR--AKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDE 129 (1028)
T ss_dssp CHHHHHHHHTCCSSSCBCHHH--HHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred CHHHHHHHhCcCccCCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 789999999999999998855 999999999999999988999999999999999999999999998775321 1
Q ss_pred CCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeeceE
Q 003371 188 GAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADG 267 (825)
Q Consensus 188 g~~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDg 267 (825)
.+..+|++++.|++.+++..++..+++++.++..++|.+. .+..++|+|||++++|++.||||||||.|++||+|||||
T Consensus 130 ~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l-~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 208 (1028)
T 2zxe_A 130 PANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNM-VPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADL 208 (1028)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTT-SCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCBCCSEE
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCCeeEEEECCEEEEEEHHHCCcCCEEEECCCCEeeceE
Confidence 1123467776666666666666666666666667777655 467899999999999999999999999999999999999
Q ss_pred EEEecCcceecCCCCCCCCCeeeecCCC--------CceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCCh
Q 003371 268 LFLDGHSLQVDESSMTGESDHVEVDSTN--------NPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTP 339 (825)
Q Consensus 268 ili~g~~l~VDES~LTGEs~pv~k~~~~--------~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tp 339 (825)
+|++|+++.||||+|||||.|+.|.+.. .+++|+||.|.+|.+.++|++||.+|.+|++++++.+.+.++||
T Consensus 209 ~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~ 288 (1028)
T 2zxe_A 209 RIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVGRTP 288 (1028)
T ss_dssp EEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHHSCCCCCH
T ss_pred EEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHHHhccCCCCCCCc
Confidence 9999988899999999999999998532 24799999999999999999999999999999999988999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhH
Q 003371 340 LQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPL 419 (825)
Q Consensus 340 lq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lpl 419 (825)
+|+.+++++.++..+++++++++|++.+ +.+. .+...+.+++++++++||||||+
T Consensus 289 lq~~~~~~~~~l~~~~l~~~~~~~~~~~---~~~~----------------------~~~~~~~~~i~llv~~iP~~Lp~ 343 (1028)
T 2zxe_A 289 IAIEIEHFIHIITGVAVFLGVSFFILSL---ILGY----------------------SWLEAVIFLIGIIVANVPEGLLA 343 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HTTC----------------------CHHHHHHHHHHHHHHHSCTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HccC----------------------cHHHHHHHHHHHHHHHcCchHHH
Confidence 9999999999999988888877776632 2221 23456778889999999999999
Q ss_pred HHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccccccc-------cCChHHH
Q 003371 420 AVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYC-------KIASSIR 492 (825)
Q Consensus 420 avtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~-------~~~~~~~ 492 (825)
++++++++++++|+++|++||+++++|+||++++||||||||||+|+|+|++++..+..+...... .......
T Consensus 344 ~vti~l~~~~~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (1028)
T 2zxe_A 344 TVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATW 423 (1028)
T ss_dssp HHHHHHHHHHHHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHH
T ss_pred HHHHHHHHHHHHHhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHH
Confidence 999999999999999999999999999999999999999999999999999999876543211100 0112223
Q ss_pred HHHHHHHhhcCCccccccCCCC--CcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecC
Q 003371 493 DLFHQGVGLNTTGSVSKLKPGS--SVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKA 570 (825)
Q Consensus 493 ~~l~~~i~~n~~~~~~~~~~~~--~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~ 570 (825)
+.+....++|+++......... ...+..|+|+|.||++++. +.+.+.+..+..+++++.+||+|++|||+++++..+
T Consensus 424 ~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~-~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~ 502 (1028)
T 2zxe_A 424 SALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIE-LCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEK 502 (1028)
T ss_dssp HHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHH-HHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSC
T ss_pred HHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHH-HhCCCHHHHHHhCceEEEeccCcccceEEEEEeccC
Confidence 3444456666655543210110 1234689999999999998 665667777888999999999999999999998642
Q ss_pred --CCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchh-HHhh
Q 003371 571 --DNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDV-KARQ 647 (825)
Q Consensus 571 --~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~-~~~~ 647 (825)
++++++|+|||||.|+++|+++. .+|...+++++.++.+.+.+++|+++|+||+++|||++++++....... ....
T Consensus 503 ~~~~~~~~~~KGA~e~il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~ 581 (1028)
T 2zxe_A 503 SSESRYLLVMKGAPERILDRCSTIL-LNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEP 581 (1028)
T ss_dssp TTTCCEEEEEEECHHHHHTTEEEEC-BTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTT
T ss_pred CCCCcEEEEEeCCcHHHHHHhhhhh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhh
Confidence 34588999999999999999864 4788889999999999999999999999999999999865321100000 0112
Q ss_pred hhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccc-----------------
Q 003371 648 RLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQ----------------- 710 (825)
Q Consensus 648 ~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~----------------- 710 (825)
...|.|++|+|+++++||+||+++++|++|+++||+|+|+|||+..||.+||++|||...+..
T Consensus 582 ~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~ 661 (1028)
T 2zxe_A 582 NFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVN 661 (1028)
T ss_dssp CSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSC
T ss_pred hhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhcc
Confidence 345789999999999999999999999999999999999999999999999999999854211
Q ss_pred --cccceeeechhhhcCCHHHHHhhccCee--EEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCC
Q 003371 711 --VEKGEVVEGVEFRNYTDEERIQKVDKIR--VMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGI 786 (825)
Q Consensus 711 --~~~~~vi~G~~~~~~~~~~~~~~~~~~~--V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~ 786 (825)
.....+++|.++..++++++.+.+.+.. ||||++|+||..+|+.||+.|++|+|+|||.||+|||++||||||||+
T Consensus 662 ~~~~~~~vi~G~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~ 741 (1028)
T 2zxe_A 662 PRDAKACVVHGSDLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGI 741 (1028)
T ss_dssp GGGCCEEEEEHHHHTTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESS
T ss_pred ccccceEEEEcHHhhhCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCC
Confidence 0124689999999999999988887764 999999999999999999999999999999999999999999999998
Q ss_pred CchHHHHHhcCeeeccCCchHHHHHHHHhHHhhcccc
Q 003371 787 QGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCF 823 (825)
Q Consensus 787 ~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~ 823 (825)
+|+++||++||+|+++|||++|++++++||++|+||.
T Consensus 742 ~gtd~ak~aAD~Vl~~~~~~~I~~~i~~gR~i~~ni~ 778 (1028)
T 2zxe_A 742 SGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLK 778 (1028)
T ss_dssp SCCHHHHHHCSEEETTCCTHHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHhcCEEecCCCHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999985
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-112 Score=1059.67 Aligned_cols=682 Identities=27% Similarity=0.400 Sum_probs=583.8
Q ss_pred CHHHHHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhhcccc-----C
Q 003371 113 GVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKE-----H 187 (825)
Q Consensus 113 gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g~~~-----~ 187 (825)
.++++++.|+|++.+||++++ +.+|+++||+|++++++++++|..++++|.+++.++|+++++++++.+... .
T Consensus 57 ~~~~~~~~l~~~~~~GLs~~e--a~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~ 134 (1034)
T 3ixz_A 57 SVAELEQKYQTSATKGLSASL--AAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDL 134 (1034)
T ss_pred CHHHHHHHhCCCcccCCCHHH--HHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHhhccCCC
Confidence 789999999999999999866 999999999999999999999999999999999999999999997654211 1
Q ss_pred CCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeeceE
Q 003371 188 GAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADG 267 (825)
Q Consensus 188 g~~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDg 267 (825)
.....|++++.|++.+++..++..+++++.++..++|.+. .+..++|+|||++++|++.||||||||.|++||+|||||
T Consensus 135 ~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l-~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VPAD~ 213 (1034)
T 3ixz_A 135 TTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNL-VPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADI 213 (1034)
T ss_pred ccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhcc-CCCeeEEEECCEEEEEEHHHCCCCcEEEEcCCceecCCe
Confidence 1123577888777777777788888888888888888765 356899999999999999999999999999999999999
Q ss_pred EEEecCcceecCCCCCCCCCeeeecCC--------CCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCCh
Q 003371 268 LFLDGHSLQVDESSMTGESDHVEVDST--------NNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTP 339 (825)
Q Consensus 268 ili~g~~l~VDES~LTGEs~pv~k~~~--------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tp 339 (825)
+|++|+++.||||+|||||.|+.|.+. ..+.+|+||.|.+|.++++|++||++|++|++++++...+.++||
T Consensus 214 ~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~~~~~~~~tp 293 (1034)
T 3ixz_A 214 RILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEKTP 293 (1034)
T ss_pred EEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhHHHHhhcccccCCCc
Confidence 999999999999999999999999752 346799999999999999999999999999999999988899999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhH
Q 003371 340 LQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPL 419 (825)
Q Consensus 340 lq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lpl 419 (825)
+|+++++++.++..+++++++++|++++. .+. .+...|..++++++++||||||+
T Consensus 294 l~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~----------------------~~~~~~~~~i~l~v~~iPe~Lp~ 348 (1034)
T 3ixz_A 294 IAIEIEHFVDIIAGLAILFGATFFIVAMC---IGY----------------------TFLRAMVFFMAIVVAYVPEGLLA 348 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcc----------------------hHHHHHHHHHHHHHheeccccHH
Confidence 99999999999988888777777666432 221 45677889999999999999999
Q ss_pred HHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccccccc-------cCChHHH
Q 003371 420 AVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYC-------KIASSIR 492 (825)
Q Consensus 420 avtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~-------~~~~~~~ 492 (825)
++|+++++++++|+++|++||+++++|+||++++||||||||||+|+|+|.++|+++..+..+... .......
T Consensus 349 ~vti~la~~~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (1034)
T 3ixz_A 349 TVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETW 428 (1034)
T ss_pred HHHHHHHHHHHHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHH
Confidence 999999999999999999999999999999999999999999999999999999876544321100 0111223
Q ss_pred HHHHHHHhhcCCccccccCCC--CCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecC
Q 003371 493 DLFHQGVGLNTTGSVSKLKPG--SSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKA 570 (825)
Q Consensus 493 ~~l~~~i~~n~~~~~~~~~~~--~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~ 570 (825)
..+...+++|+.+........ .......|+|+|.|++.++. ..+.+....+..+++++.+||+|++|+|++++...+
T Consensus 429 ~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~-~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~ 507 (1034)
T 3ixz_A 429 RALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSE-LTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLED 507 (1034)
T ss_pred HHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHH-HhCCChHHHHHhCcceEEeeecCCCceEEEEEEecC
Confidence 334455566665554321010 11345789999999999998 778888888899999999999999999988876543
Q ss_pred --CCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccch-hHHhh
Q 003371 571 --DNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNND-VKARQ 647 (825)
Q Consensus 571 --~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~-~~~~~ 647 (825)
++++++|+|||||.|+++|+++.. +|...+++++.++.+.+.+++|+.+|+||+++|||.+++++...... .....
T Consensus 508 ~~~~~~~l~~KGApe~il~~c~~~~~-~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~ 586 (1034)
T 3ixz_A 508 PRDPRHVLVMKGAPERVLERCSSILI-KGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAM 586 (1034)
T ss_pred CCCccEEEEEeCChHHHHHHhHHhhc-CCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhh
Confidence 245889999999999999998774 67888999999999999999999999999999999987532111100 01123
Q ss_pred hhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccc-----------------
Q 003371 648 RLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQ----------------- 710 (825)
Q Consensus 648 ~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~----------------- 710 (825)
+..|.||+|+|+++++||+||+++++|++|+++||+|+|+|||+..||.+||++|||..++..
T Consensus 587 ~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~ 666 (1034)
T 3ixz_A 587 NFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVN 666 (1034)
T ss_pred hccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhcc
Confidence 346899999999999999999999999999999999999999999999999999999764321
Q ss_pred --cccceeeechhhhcCCHHHHHhhccCe--eEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCC
Q 003371 711 --VEKGEVVEGVEFRNYTDEERIQKVDKI--RVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGI 786 (825)
Q Consensus 711 --~~~~~vi~G~~~~~~~~~~~~~~~~~~--~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~ 786 (825)
.....+++|.++..+.++++.+.+.+. .||||++|+||..+|+.+|+.|++|+|+|||.||+|||++||||||||+
T Consensus 667 ~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ 746 (1034)
T 3ixz_A 667 RKDARACVINGMQLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGI 746 (1034)
T ss_pred ccccceeEEecHhhhhCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCC
Confidence 112468999999999999988887765 4999999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHhcCeeeccCCchHHHHHHHHhHHhhccccC
Q 003371 787 QGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCFC 824 (825)
Q Consensus 787 ~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~~ 824 (825)
+|+++||++||+|++||||.+|+.++++||++|+||..
T Consensus 747 ng~d~aK~aAD~Vl~~~~~~gI~~ai~~GR~i~~ni~k 784 (1034)
T 3ixz_A 747 AGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKK 784 (1034)
T ss_pred ccCHHHHHhcCEEeccCCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999864
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-112 Score=1052.00 Aligned_cols=688 Identities=29% Similarity=0.441 Sum_probs=576.7
Q ss_pred CHHHHHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhhccccCC--CC
Q 003371 113 GVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHG--AE 190 (825)
Q Consensus 113 gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g--~~ 190 (825)
.++++++.|+++..+||++++ +.+|+++||+|+++.++++++|++++++|+++++++|++++++|+++++...+ ..
T Consensus 9 ~~~~~~~~l~~~~~~GLs~~e--~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~ 86 (995)
T 3ar4_A 9 STEECLAYFGVSETTGLTPDQ--VKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGEETI 86 (995)
T ss_dssp CHHHHHHHHTCCTTTCBCHHH--HHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGG
T ss_pred CHHHHHHHhCCCcccCCCHHH--HHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 689999999999999998755 99999999999999988899999999999999999999999999998865533 23
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCE--EEEEEecCcccCeEEEeCCCCeeeceEE
Q 003371 191 EGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREAR--RLQISIFDLVVGDIVFLKIGDQIPADGL 268 (825)
Q Consensus 191 ~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~--~~~I~~~dLvvGDIV~l~~Gd~VPaDgi 268 (825)
..|+|++.|++++++..++..+++++.++.+++|.+. .+..++|+|||+ .++|+++||||||||.|++||+|||||+
T Consensus 87 ~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~-~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~~ 165 (995)
T 3ar4_A 87 TAFVEPFVILLILIANAIVGVWQERNAENAIEALKEY-EPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIR 165 (995)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGG-SCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEEE
T ss_pred hhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCcccccEE
Confidence 4689998888888887888888888888888888765 567899999987 6999999999999999999999999999
Q ss_pred EEe--cCcceecCCCCCCCCCeeeecCCC-----------CceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCC
Q 003371 269 FLD--GHSLQVDESSMTGESDHVEVDSTN-----------NPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSN 335 (825)
Q Consensus 269 li~--g~~l~VDES~LTGEs~pv~k~~~~-----------~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~ 335 (825)
|++ +..+.||||+|||||.|+.|.+.. ++++|+||.|.+|.++++|++||.+|.+|++++++.+.+.
T Consensus 166 ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~ 245 (995)
T 3ar4_A 166 ILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATEQ 245 (995)
T ss_dssp EEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHTCCC
T ss_pred EEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhhcCCC
Confidence 965 456899999999999999998531 3799999999999999999999999999999999999899
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhcc
Q 003371 336 ERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPE 415 (825)
Q Consensus 336 ~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~ 415 (825)
++||+|+++++++.++.+++++++++++++++.. +.. . +.+ .+++..+..+|..++++++++|||
T Consensus 246 ~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~-----~~~-----~~~~~~~~~~~~~ai~l~v~aiP~ 310 (995)
T 3ar4_A 246 DKTPLQQKLDEFGEQLSKVISLICVAVWLINIGH-FND----P-----VHG-----GSWIRGAIYYFKIAVALAVAAIPE 310 (995)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGG-GGS----C-----SSS-----SCHHHHHHHHHHHHHHHHHHHSCT
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcc----c-----ccc-----chHHHHHHHHHHHHHHHHHHhcCc
Confidence 9999999999999999888777766655443211 100 0 000 011234556778899999999999
Q ss_pred chhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEecccccc---------------
Q 003371 416 GLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIV--------------- 480 (825)
Q Consensus 416 ~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~--------------- 480 (825)
+||+++++++++++++|+++|++||+++++|+||++++||||||||||+|+|+|.+++..+..+.
T Consensus 311 ~Lp~~vt~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (995)
T 3ar4_A 311 GLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTY 390 (995)
T ss_dssp THHHHHHHHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSS
T ss_pred chHHHHHHHHHHHHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999987532110
Q ss_pred -cccc---------ccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCC-ch--H------
Q 003371 481 -QETY---------CKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGM-EM--D------ 541 (825)
Q Consensus 481 -~~~~---------~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~-~~--~------ 541 (825)
+... ....+.... +....++|+++.+... +..+..+..|+|+|.|++.++. +.|. +. .
T Consensus 391 ~p~~~~~~~~~~~~~~~~~~~~~-l~~~~alc~~~~~~~~-~~~~~~~~~g~p~E~Al~~~a~-~~g~~~~~~~~i~~~~ 467 (995)
T 3ar4_A 391 APEGEVLKNDKPIRSGQFDGLVE-LATICALCNDSSLDFN-ETKGVYEKVGEATETALTTLVE-KMNVFNTEVRNLSKVE 467 (995)
T ss_dssp SSCCCEEETTEECCGGGCHHHHH-HHHHHHHSCCCEEEEE-TTTTEEEEESCHHHHHHHHHHH-HHCTTCCCCTTSCTTT
T ss_pred CCccccccccccccccccHHHHH-HHHHHHHcCCCccccc-CCCCceeecCCccHHHHHHHHH-HcCCcccccccccccc
Confidence 0000 001122333 3445556665554321 2233445679999999999987 6665 11 1
Q ss_pred -------HHhhcceEEEEecCCCCCceeEEEEEecCCC----eEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHH
Q 003371 542 -------KVKQKYSILHVETFNSEKKRSGVLIRRKADN----TTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQM 610 (825)
Q Consensus 542 -------~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~----~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~ 610 (825)
..+..|++++.+||+|+||||+|+++..++. ++++|+|||||.|+++|+++... +...+++++.++.+
T Consensus 468 ~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~-~~~~~l~~~~~~~~ 546 (995)
T 3ar4_A 468 RANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVG-TTRVPMTGPVKEKI 546 (995)
T ss_dssp STTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEET-TEEEECCHHHHHHH
T ss_pred ccccchhhhhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcC-CCcccCCHHHHHHH
Confidence 2456789999999999999999999876551 37899999999999999987663 46788999999999
Q ss_pred HHHHHHH--hhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEc
Q 003371 611 ENIIHGM--AASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMIT 688 (825)
Q Consensus 611 ~~~i~~~--a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvT 688 (825)
.+.+++| +++|+||+++|||+++..+..............|.+++|+|+++++||+||+++++|+.|+++||+|+|+|
T Consensus 547 ~~~~~~~~~a~~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miT 626 (995)
T 3ar4_A 547 LSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMIT 626 (995)
T ss_dssp HHHHHHHHHSTTCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHhhhccceEEEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEEC
Confidence 9999999 99999999999999854221110000112344688999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCC
Q 003371 689 GDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDG 768 (825)
Q Consensus 689 GD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG 768 (825)
||+..||.+||++|||...+.+. ...+++|.++..++++++.+.+++..||||++|+||.++|+.||++|++|+|+|||
T Consensus 627 GD~~~ta~~ia~~lgi~~~~~~i-~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG 705 (995)
T 3ar4_A 627 GDNKGTAIAICRRIGIFGENEEV-ADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDG 705 (995)
T ss_dssp SSCHHHHHHHHHHHTSSCTTCCC-TTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECS
T ss_pred CCCHHHHHHHHHHcCcCCCCCcc-cceEEEchhhhhCCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCC
Confidence 99999999999999998643211 24689999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhccccC
Q 003371 769 TNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCFC 824 (825)
Q Consensus 769 ~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~~ 824 (825)
+||+|||++|||||||| +|+++||++||+|+++|||.+|+++++|||++|+||..
T Consensus 706 ~ND~~alk~Advgiamg-~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k 760 (995)
T 3ar4_A 706 VNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQ 760 (995)
T ss_dssp GGGHHHHHHSTEEEEET-TSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHCCeEEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 99999999999999999999999999999999999853
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-111 Score=1023.25 Aligned_cols=642 Identities=26% Similarity=0.367 Sum_probs=542.6
Q ss_pred CCCCHHHHHHHhcCCChhHH---H---hhCCHHH-HHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHH
Q 003371 89 PDMDGIRLAEMVKNKDSHTL---S---LLGGVEG-VANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVL 161 (825)
Q Consensus 89 ~~~~~~~l~~~~~~~~~~~l---~---~~ggv~~-l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~ 161 (825)
++.+.++|.+.++.++.+.. . ..|++++ ++..|+++..+||++++ +.+|+++||+|++++++ +++|..++
T Consensus 41 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~e--a~~r~~~~G~N~l~~~~-~~~~~~~l 117 (920)
T 1mhs_A 41 EDEDIDALIEDLESHDGHDAEEEEEEATPGGGRVVPEDMLQTDTRVGLTSEE--VVQRRRKYGLNQMKEEK-ENHFLKFL 117 (920)
T ss_dssp CHHHHHHHHHHHSSCCCCCCSSSCCCSHHHHHSCCSSTTTTTCCCCCCCSHH--HHHHHHHTSSSSCCCCC-CSSHHHHT
T ss_pred hhcCHHHHHHHHhhhcccccccchhhhhcCccchhHHHHhCCCcCCCCCHHH--HHHHHHhcCCCccCCCC-CCHHHHHH
Confidence 45777788877775444322 1 2244444 45679999889999865 99999999999999664 67888899
Q ss_pred HHhhhHHHHHHHHHHHHHhhhccccCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEE
Q 003371 162 EAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARR 241 (825)
Q Consensus 162 ~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~ 241 (825)
++|.+++.++|+++++++++++ .|.|++.|++.+++..++..+++|+.++..++|.+. .+..++|+|||++
T Consensus 118 ~~f~~~~~~ll~~aai~s~~~g--------~~~~~~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l-~~~~a~V~RdG~~ 188 (920)
T 1mhs_A 118 GFFVGPIQFVMEGAAVLAAGLE--------DWVDFGVICGLLLLNAVVGFVQEFQAGSIVDELKKT-LALKAVVLRDGTL 188 (920)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCS--------CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTC-CCSSCEEECSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCEEEEEECCEE
Confidence 9999999999999999998876 588888777777778888999999998888888755 3568999999999
Q ss_pred EEEEecCcccCeEEEeCCCCeeeceEEEEecCc-ceecCCCCCCCCCeeeecCCCCceeeeCceeeeceEEEEEEEEccc
Q 003371 242 LQISIFDLVVGDIVFLKIGDQIPADGLFLDGHS-LQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMN 320 (825)
Q Consensus 242 ~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~-l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~ 320 (825)
++|++.||||||||.|++||+|||||+|++|++ +.||||+|||||.|+.|. .++.+|+||.|.+|.+.++|++||.+
T Consensus 189 ~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~l~VDES~LTGES~PV~K~--~gd~v~sGT~v~~G~~~~~V~~tG~~ 266 (920)
T 1mhs_A 189 KEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTGESLAVDKH--KGDQVFASSAVKRGEAFVVITATGDN 266 (920)
T ss_dssp EECCTTTSCTTSEEEECTTCBCSSEEEEEEESSCCEEBCTTTSSCCCCEECC--SSCEECSCBCCSCCCEEEEEEECSTT
T ss_pred EEEEHHHcCCCCEEEeCCCCccccceEEEecCceeeeeccccCCCCcceEec--CCCeeecCceEecceEEEEEEEeCCc
Confidence 999999999999999999999999999999996 999999999999999998 57899999999999999999999999
Q ss_pred chHHHHHhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHH
Q 003371 321 TAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVS 400 (825)
Q Consensus 321 T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (825)
|++|++.+++.+...+++|+|+.+++++.++..+.+++++++++.+ ++.+ . .+..
T Consensus 267 T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~---~~~~-------~---------------~~~~ 321 (920)
T 1mhs_A 267 TFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSS---FYRS-------N---------------PIVQ 321 (920)
T ss_dssp CSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT---TTTT-------C---------------CHHH
T ss_pred CHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcC-------C---------------cHHH
Confidence 9999999999888888999999999999887765554443332211 1100 0 3556
Q ss_pred HHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEecccccc
Q 003371 401 IVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIV 480 (825)
Q Consensus 401 ~~~~av~ilvvavP~~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~ 480 (825)
+|..++++++++||||||+++|+++++++.+|+++|++||+++++|+||++++||||||||||+|+|+|.+++..+. +.
T Consensus 322 ~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g-~~ 400 (920)
T 1mhs_A 322 ILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAG-VD 400 (920)
T ss_dssp HHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSC-CC
T ss_pred HHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCC-CC
Confidence 78889999999999999999999999999999999999999999999999999999999999999999998875432 11
Q ss_pred ccccccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCc
Q 003371 481 QETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKK 560 (825)
Q Consensus 481 ~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~k 560 (825)
. . +++. ..++|+... .. .+||+|.|+++++. +.+.. ......+++++.+||+|.+|
T Consensus 401 ~-------~---~ll~-~a~l~~~~~------~~-----~~~P~e~Al~~~~~-~~~~~-~~~~~~~~~~~~~pF~s~~k 456 (920)
T 1mhs_A 401 P-------E---DLML-TACLAASRK------KK-----GIDAIDKAFLKSLK-YYPRA-KSVLSKYKVLQFHPFDPVSK 456 (920)
T ss_dssp C-------T---HHHH-HHHHSCCCS------SC-----SCCSHHHHHHHHHH-HSSSC-CGGGSCCCEEEEEEEETTTT
T ss_pred H-------H---HHHH-HHHHhcCCc------cc-----CCChHHHHHHHHHH-hcccc-hhhccccceeEEeeccCCCC
Confidence 0 1 1222 233333211 00 25999999999887 55432 22345688999999999999
Q ss_pred eeEEEEEecCCCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhccc
Q 003371 561 RSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYN 640 (825)
Q Consensus 561 rmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~ 640 (825)
+|+++++.++++ ..+++|||||.|+++|+. ..+++++.++.+.+.+++|+++|+|++++||+..
T Consensus 457 ~ms~iv~~~~g~-~~~~~KGape~il~~c~~-------~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~-------- 520 (920)
T 1mhs_A 457 KVVAVVESPQGE-RITCVKGAPLFVLKTVEE-------DHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG-------- 520 (920)
T ss_dssp EEEEEECCSSSS-CEEEEEECHHHHHHHCCC-------SSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSS--------
T ss_pred eEEEEEEeCCCc-EEEEEeCCHHHHHHhccc-------cCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEecc--------
Confidence 999998765555 668899999999999974 2356777888899999999999999999999732
Q ss_pred chhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeech
Q 003371 641 NDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGV 720 (825)
Q Consensus 641 ~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~ 720 (825)
|.+++|+|+++++||+||+++++|+.|+++||+|+|+||||+.||.+||++|||..... .....+++|.
T Consensus 521 ----------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~-~~~~~~~~g~ 589 (920)
T 1mhs_A 521 ----------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIY-NAERLGLGGG 589 (920)
T ss_dssp ----------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCC-CSSSSSSCBC
T ss_pred ----------ccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCcccc-CccceeecCc
Confidence 35789999999999999999999999999999999999999999999999999974211 1123466666
Q ss_pred hhhcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeee
Q 003371 721 EFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVI 800 (825)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivl 800 (825)
..++++++.+.+++..||||++|+||.++|+.||++|++|+|||||+||+|||++|||||||| +|+++||++||+|+
T Consensus 590 --~~~~~~el~~~~~~~~V~arv~P~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADiVl 666 (920)
T 1mhs_A 590 --GDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVE-GSSDAARSAADIVF 666 (920)
T ss_dssp --CCGGGGGGGTTTTTTSCEESCCSTHHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEET-TSCHHHHHSSSEEE
T ss_pred --ccCCHHHHHHHHhhCeEEEEeCHHHHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccc-cccHHHHHhcCeEE
Confidence 567778888888999999999999999999999999999999999999999999999999999 89999999999999
Q ss_pred ccCCchHHHHHHHHhHHhhccccC
Q 003371 801 LDDDFTSVATVLSPGDQLHSGCFC 824 (825)
Q Consensus 801 ldd~f~sIv~~i~~gR~i~~ni~~ 824 (825)
+||||++|+++++|||++|+||..
T Consensus 667 ~~~~~~~I~~ai~~gR~~~~ni~k 690 (920)
T 1mhs_A 667 LAPGLGAIIDALKTSRQIFHRMYA 690 (920)
T ss_dssp SSCCSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999864
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-110 Score=1011.41 Aligned_cols=625 Identities=24% Similarity=0.349 Sum_probs=516.7
Q ss_pred CHHHHHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCCCc
Q 003371 113 GVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEG 192 (825)
Q Consensus 113 gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~ 192 (825)
.++++.+.|+++ .+||++++ +.+|+++||+|++++++ +++|..++++|.+++.++|++++++|++++... +....
T Consensus 18 ~~~~~~~~l~~~-~~GLs~~e--~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~~-~~~~~ 92 (885)
T 3b8c_A 18 PIEEVFQQLKCS-REGLTTQE--GEDRIQIFGPNKLEEKK-ESKLLKFLGFMWNPLSWVMEMAAIMAIALANGD-GRPPD 92 (885)
T ss_dssp STTCCTTTSSSC-SSCSTHHH--HHHHSSSCCSCCTTTTC-CCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCCT-TSCSC
T ss_pred CHHHHHHHhCCC-CCCCCHHH--HHHHHHhcCCCccCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccccc
Confidence 456667778888 68998855 99999999999999876 677888899999999999999999999887432 34457
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEec
Q 003371 193 WYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDG 272 (825)
Q Consensus 193 ~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g 272 (825)
|+|++.|++.+++..++..+.+++.++..++|.+. .+.+++|+|||++++|+++||||||||.|++||+|||||++++|
T Consensus 93 ~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~-~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g 171 (885)
T 3b8c_A 93 WQDFVGIICLLVINSTISFIEENNAGNAAAALMAG-LAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEG 171 (885)
T ss_dssp CTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTS-CSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeceEEEEc
Confidence 99988777766666667777777777777877654 45678999999999999999999999999999999999999999
Q ss_pred CcceecCCCCCCCCCeeeecCCCCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHHHHHH
Q 003371 273 HSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIG 352 (825)
Q Consensus 273 ~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~ 352 (825)
+++.||||+|||||.|+.|. .++.+|+||.|.+|.+.++|++||.+|++|++.+++.+ ..+++|+|+.+++++.++.
T Consensus 172 ~~l~VdES~LTGES~Pv~K~--~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~-~~~~~~lq~~~~~i~~~~~ 248 (885)
T 3b8c_A 172 DPLKVDQSALTGESLPVTKH--PGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTAIGNFCI 248 (885)
T ss_dssp SCBCCCCCSTTCCSSCCCBS--SCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCS-CSCCSTTTTTTHHHHHHHH
T ss_pred CcccccccccCCCCcceEec--CCCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhc-ccccChHHHHHHHHHHHHH
Confidence 99899999999999999998 57899999999999999999999999999999988876 6788999999999987643
Q ss_pred H-HHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 003371 353 K-VGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKR 431 (825)
Q Consensus 353 ~-~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~ 431 (825)
. ++++++++++++ |+.. .. .+...+..++++++++|||+||+++++++++++.+
T Consensus 249 ~~~~~~~~~~~~~~----~~~~-------~~--------------~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r 303 (885)
T 3b8c_A 249 CSIAIGMVIEIIVM----YPIQ-------RR--------------KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 303 (885)
T ss_dssp HHHHHHHHHHSTTT----TTTT-------CS--------------CSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHH
T ss_pred HHHHHHHHHHHHHH----HHHc-------cC--------------cHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 2 222222222211 1110 00 11235678899999999999999999999999999
Q ss_pred HhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccccccccCChHHHHHHHHHHhhcCCccccccC
Q 003371 432 MMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLK 511 (825)
Q Consensus 432 m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~ 511 (825)
|+++|++||+++++|+||++++||||||||||+|+|+|.+.++.. +.. ..+ ..+++..+. +|+..
T Consensus 304 ~ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~--~~~----~~~--~~~ll~~aa-~~~~~------ 368 (885)
T 3b8c_A 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEV--FCK----GVE--KDQVLLFAA-MASRV------ 368 (885)
T ss_dssp HTTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCCS--SCS----STT--HHHHHHHHH-HHCCS------
T ss_pred HHhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEec--cCC----CCC--HHHHHHHHH-HHhCC------
Confidence 999999999999999999999999999999999999997533110 100 011 122333333 33211
Q ss_pred CCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhccc
Q 003371 512 PGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSH 591 (825)
Q Consensus 512 ~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~ 591 (825)
..+||+|.|+++++. + ....+..+++++.+||+|.+|||+++++..+|. .++++|||||.++++|+.
T Consensus 369 -------~~~~p~~~Al~~~~~-~----~~~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~-~~~~~KGa~e~il~~c~~ 435 (885)
T 3b8c_A 369 -------ENQDAIDAAMVGMLA-D----PKEARAGIREVHFLPFNPVDKRTALTYIDGSGN-WHRVSKGAPEQILELAKA 435 (885)
T ss_dssp -------SSCCSHHHHHHHTTC-C----TTCCCCSSCCBCCCCCCTTTCCCCCBBCSSSSC-BCBCCCCSGGGTSSSSCC
T ss_pred -------CCCCchHHHHHHHhh-c----hhhHhhcCceeecccCCcccceEEEEEEecCCc-EEEEEeCCHHHHHHhccC
Confidence 147999999998764 2 222345678889999999999999988654444 678899999999999973
Q ss_pred ccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHH
Q 003371 592 YYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQ 671 (825)
Q Consensus 592 ~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~ 671 (825)
+++.++.+.+.+++|+++|+|++++||+++++++ .+..|++++|+|+++++||+|||++
T Consensus 436 -----------~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~----------~~~~e~~l~~lGli~i~Dp~R~~a~ 494 (885)
T 3b8c_A 436 -----------SNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKT----------KESPGAPWEFVGLLPLFDPPRHDSA 494 (885)
T ss_dssp -----------CSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSS----------SSCCCCCCCCCEEEEECCCCCHHHH
T ss_pred -----------chhhHHHHHHHHHHHHhCCCeEEEEEEecccccc----------ccccccCcEEEEEEEeecccchhHH
Confidence 1233455778899999999999999999886421 1234678999999999999999999
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhc-CCHHHHHhhccCeeEEEecCHHHHHH
Q 003371 672 KAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRN-YTDEERIQKVDKIRVMARSSPFDKLL 750 (825)
Q Consensus 672 ~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~-~~~~~~~~~~~~~~V~ar~sP~dK~~ 750 (825)
++|+.|+++||+|+|+||||+.||.+||+++||..... ...+++|.+++. +++.++.+.+++..||||++|+||.+
T Consensus 495 ~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~---~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~~K~~ 571 (885)
T 3b8c_A 495 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY---PSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYE 571 (885)
T ss_dssp HHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCS---TTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCHHHHHH
T ss_pred HHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccC---CcceeeccccccccchhHHHHHHhhCcEEEEECHHHHHH
Confidence 99999999999999999999999999999999964211 234678888876 77777888888899999999999999
Q ss_pred HHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhccccC
Q 003371 751 MVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCFC 824 (825)
Q Consensus 751 lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~~ 824 (825)
+|+.||++|++|+|||||+||+|||++|||||||| +|+++||++||+|++||||++|++++++||++|+||..
T Consensus 572 iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~~ 644 (885)
T 3b8c_A 572 IVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKN 644 (885)
T ss_dssp HHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeC-CccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 89999999999999999999999999999999999864
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-82 Score=758.28 Aligned_cols=494 Identities=26% Similarity=0.368 Sum_probs=413.6
Q ss_pred CCcchhhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHhchhCCCeeEEEe-CCEEEEEEecCcccCeEEEeCCCCeeeceE
Q 003371 190 EEGWYEGGSIFVAVFL-VIVVSAFSNFRQARQFDKLSKISNNIKVEVVR-EARRLQISIFDLVVGDIVFLKIGDQIPADG 267 (825)
Q Consensus 190 ~~~~~d~~~i~~~v~l-v~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R-~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDg 267 (825)
...|+|.+++++++++ --+++...+.+.++..++|.++ .+..++|+| ||++++|++++|+|||+|.|++||+|||||
T Consensus 184 ~~~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l-~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg 262 (736)
T 3rfu_A 184 VAVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKL-VPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDG 262 (736)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCC-CCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCE
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccE
Confidence 3468887765544333 2333333333334445555544 356777887 999999999999999999999999999999
Q ss_pred EEEecCcceecCCCCCCCCCeeeecCCCCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCChhHHHHHHH
Q 003371 268 LFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKL 347 (825)
Q Consensus 268 ili~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~ 347 (825)
++++|++ .||||+|||||.|+.|. .++.+|+||.+.+|.++++|+++|.+|.+|++++++.+.+.+++|+|+.++++
T Consensus 263 ~vl~G~~-~VDES~LTGES~Pv~K~--~gd~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~ 339 (736)
T 3rfu_A 263 EVQEGRS-FVDESMVTGEPIPVAKE--ASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTV 339 (736)
T ss_dssp EECSSCE-EEECSSSTTCSSCEEEC--TTCEECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHH
T ss_pred EEEECce-EeeecccCCccccEEec--cCCcCCCceEeccceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHH
Confidence 9999997 89999999999999998 57899999999999999999999999999999999998888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH
Q 003371 348 TSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAY 427 (825)
Q Consensus 348 a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~ 427 (825)
+.++.++++++++++|++|++ .+.. . .+...+..++++++++|||+|++++|++++.
T Consensus 340 a~~~v~~vl~ia~~~~~~w~~---~~~~------~--------------~~~~~l~~ai~vlviacPcaL~la~p~a~~~ 396 (736)
T 3rfu_A 340 SGWFVPAVILVAVLSFIVWAL---LGPQ------P--------------ALSYGLIAAVSVLIIACPCALGLATPMSIMV 396 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---HCSS------S--------------STTHHHHHHHHHHHHHCCSTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH---hCCC------c--------------hHHHHHHHHHHhHHHhhhhHHHHHHHHHHHH
Confidence 999999999999999888643 2210 0 1235678899999999999999999999999
Q ss_pred HHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccccccccCChHHHHHHHHHHhhcCCccc
Q 003371 428 SMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSV 507 (825)
Q Consensus 428 ~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~ 507 (825)
++.+++++|+++|+++++|+||++++||||||||||+|+|+|.+++..+.. + .+++....++.
T Consensus 397 ~~~~~a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~----------~--~~~l~~aa~le----- 459 (736)
T 3rfu_A 397 GVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVTDDFV----------E--DNALALAAALE----- 459 (736)
T ss_dssp HHHHHHHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEEESSSC----------H--HHHHHHHHHHH-----
T ss_pred HHHHHhhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEEecCCC----------H--HHHHHHHHHHh-----
Confidence 999999999999999999999999999999999999999999999843211 1 12222222111
Q ss_pred cccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHH
Q 003371 508 SKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILA 587 (825)
Q Consensus 508 ~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~ 587 (825)
..+.||.++|+++++. +.+... ....+|++..++. +... .++..+ .+|+++.+.+
T Consensus 460 ----------~~s~hPla~Aiv~~a~-~~~~~~---------~~~~~f~~~~g~g-v~~~-~~g~~~---~~G~~~~~~~ 514 (736)
T 3rfu_A 460 ----------HQSEHPLANAIVHAAK-EKGLSL---------GSVEAFEAPTGKG-VVGQ-VDGHHV---AIGNARLMQE 514 (736)
T ss_dssp ----------HSSCCHHHHHHHHHHH-TTCCCC---------CCCSCCCCCTTTE-EEEC-SSSSCE---EEESHHHHHH
T ss_pred ----------hcCCChHHHHHHHHHH-hcCCCc---------cCcccccccCCce-EEEE-ECCEEE---EEcCHHHHHH
Confidence 1256999999999987 555432 2345788877653 3332 244433 5699998865
Q ss_pred hcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCc
Q 003371 588 MCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCR 667 (825)
Q Consensus 588 ~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR 667 (825)
.+.. ...+.+..++++.+|+|++++|+ +.+++|+++++|++|
T Consensus 515 ~~~~---------------~~~~~~~~~~~~~~G~~vl~va~-----------------------d~~~~G~i~i~D~i~ 556 (736)
T 3rfu_A 515 HGGD---------------NAPLFEKADELRGKGASVMFMAV-----------------------DGKTVALLVVEDPIK 556 (736)
T ss_dssp HCCC---------------CHHHHHHHHHHHHTTCEEEEEEE-----------------------TTEEEEEEEEECCBC
T ss_pred cCCC---------------hhHHHHHHHHHHhcCCeEEEEEE-----------------------CCEEEEEEEeeccch
Confidence 4321 12356678899999999999998 447999999999999
Q ss_pred ccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHH
Q 003371 668 PGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFD 747 (825)
Q Consensus 668 ~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~d 747 (825)
|+++++|++|+++|++++|+|||+..+|.++|+++||.. ++++++|+|
T Consensus 557 ~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~--------------------------------v~a~~~P~~ 604 (736)
T 3rfu_A 557 SSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKK--------------------------------VVAEIMPED 604 (736)
T ss_dssp SSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCC--------------------------------EECSCCHHH
T ss_pred hhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCE--------------------------------EEEecCHHH
Confidence 999999999999999999999999999999999999964 899999999
Q ss_pred HHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhcccc
Q 003371 748 KLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCF 823 (825)
Q Consensus 748 K~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~ 823 (825)
|..+|+.||++|+.|+|+|||.||+|||++|||||||| +|+++||++||+|+++||+..|++++++||++|.||.
T Consensus 605 K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg-~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~ 679 (736)
T 3rfu_A 605 KSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIR 679 (736)
T ss_dssp HHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEES-SSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeC-CccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 8999999999999999999999999999999999985
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-79 Score=726.43 Aligned_cols=480 Identities=27% Similarity=0.389 Sum_probs=396.9
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHH-------HHHHhchhCCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeec
Q 003371 193 WYEGGSIFVAVFLVIVVSAFSNFRQARQ-------FDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPA 265 (825)
Q Consensus 193 ~~d~~~i~~~v~lv~~v~~~~~~~~~~~-------~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPa 265 (825)
||+..++++.++++ .+|.+.++ .++|.+. .+.+++|+|||++++|+++||+|||+|.|++||+|||
T Consensus 95 ~~~~~~~i~~~~~i------g~~le~~~~~~~~~~l~~l~~l-~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPa 167 (645)
T 3j08_A 95 FYETSVLLLAFLLL------GRTLEARAKSRTGEAIKKLVGL-QAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPV 167 (645)
T ss_dssp CCCSHHHHHHHHHH------HHHHHHHHHCCCCCCCHHHHHT-SCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCS
T ss_pred HHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHhcC-CCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEee
Confidence 67776655444332 33333332 3444333 4678999999999999999999999999999999999
Q ss_pred eEEEEecCcceecCCCCCCCCCeeeecCCCCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCChhHHHHH
Q 003371 266 DGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLD 345 (825)
Q Consensus 266 Dgili~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~ 345 (825)
||++++|++ .||||+|||||.|+.|. .++.+|+||.+.+|.++++|+++|.+|.+|++++++.+...+++|+|+.++
T Consensus 168 Dg~vl~G~~-~VdeS~LTGES~Pv~K~--~g~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d 244 (645)
T 3j08_A 168 DGVVVEGES-YVDESMISGEPVPVLKS--KGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLAD 244 (645)
T ss_dssp EEEEEECCE-EEECHHHHCCSSCEEEC--TTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHH
T ss_pred EEEEEECcE-EEEcccccCCCCceecC--CCCEeeccEEEecCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHH
Confidence 999999987 89999999999999998 578999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHH
Q 003371 346 KLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTL 425 (825)
Q Consensus 346 ~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~l 425 (825)
+++.++.++.++++++++++|. +... ..| ...+..++++++++|||+||+++|+++
T Consensus 245 ~~~~~~~~~vl~~a~~~~~~~~---~~~~-------~~~--------------~~~~~~~i~vlvia~P~aL~la~p~a~ 300 (645)
T 3j08_A 245 KVVAYFIPTVLLVAISAFIYWY---FIAH-------APL--------------LFAFTTLIAVLVVACPCAFGLATPTAL 300 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSS---CCCS-------CSC--------------CCTTTTTHHHHHHHSCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---HhcC-------CcH--------------HHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 9999999988888887776542 1110 011 123556789999999999999999999
Q ss_pred HHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccccccccCChHHHHHHHHHHhhcCCc
Q 003371 426 AYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTG 505 (825)
Q Consensus 426 a~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~ 505 (825)
+.++.+++++|++||+++++|+||++++||||||||||+|+|+|.+++..+.. ..+++.....+.
T Consensus 301 ~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~------------~~~~l~~aa~~e--- 365 (645)
T 3j08_A 301 TVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD------------ERELLRLAAIAE--- 365 (645)
T ss_dssp HHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESSSC------------HHHHHHHHHHHH---
T ss_pred HHHHHHHHHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeCCCC------------HHHHHHHHHHHh---
Confidence 99999999999999999999999999999999999999999999999876421 112222222111
Q ss_pred cccccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHH
Q 003371 506 SVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEII 585 (825)
Q Consensus 506 ~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~i 585 (825)
..+.||.+.|+++++. +.|.+.... .+|.+..++ ++.. ..+.+|+++.+
T Consensus 366 ------------~~s~hPla~Aiv~~a~-~~g~~~~~~---------~~~~~~~g~-g~~~--------~~v~~g~~~~~ 414 (645)
T 3j08_A 366 ------------RRSEHPIAEAIVKKAL-EHGIELGEP---------EKVEVIAGE-GVVA--------DGILVGNKRLM 414 (645)
T ss_dssp ------------TTCCSHHHHHHHHHHH-HTTCCCCSC---------CCCEEETTT-EEEE--------TTEEEECHHHH
T ss_pred ------------hcCCChhHHHHHHHHH-hcCCCcCCc---------cceEEecCC-ceEE--------EEEEECCHHHH
Confidence 1256999999999997 666543211 122221111 1111 12356888776
Q ss_pred HHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCC
Q 003371 586 LAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDP 665 (825)
Q Consensus 586 l~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~Dp 665 (825)
.+... ...+.+.+.+++++.+|+|++++|+ +++++|+++++|+
T Consensus 415 ~~~~~--------------~~~~~~~~~~~~~~~~g~~~l~va~-----------------------~~~~~G~i~~~D~ 457 (645)
T 3j08_A 415 EDFGV--------------AVSNEVELALEKLEREAKTAVIVAR-----------------------NGRVEGIIAVSDT 457 (645)
T ss_dssp HHTTC--------------CCCHHHHHHHHHHHTTTCCCEEEEE-----------------------TTEEEEEEEEECC
T ss_pred HhcCC--------------CccHHHHHHHHHHHhcCCeEEEEEE-----------------------CCEEEEEEEecCC
Confidence 54321 1123567778899999999999997 4579999999999
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCH
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSP 745 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP 745 (825)
+||+++++|+.|+++|++++|+|||+..+|.++|+++||.. ++++++|
T Consensus 458 l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~--------------------------------~~~~~~P 505 (645)
T 3j08_A 458 LKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL--------------------------------VIAEVLP 505 (645)
T ss_dssp CTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE--------------------------------EECSCCT
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE--------------------------------EEEeCCH
Confidence 99999999999999999999999999999999999999964 8999999
Q ss_pred HHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhcccc
Q 003371 746 FDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCF 823 (825)
Q Consensus 746 ~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~ 823 (825)
+||..+|+.|+++ +.|+|+|||.||+|||++|||||||| +|+++|+++||+|+++||+..|++++++||++|.||.
T Consensus 506 ~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~ 581 (645)
T 3j08_A 506 HQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 581 (645)
T ss_dssp TCHHHHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEEC-CCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEeC-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988 89999999999999999999999999 8999999999999999999999999999999999985
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-79 Score=733.21 Aligned_cols=486 Identities=26% Similarity=0.385 Sum_probs=397.9
Q ss_pred chhhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEe
Q 003371 193 WYEGGSIFVAVFLV-IVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLD 271 (825)
Q Consensus 193 ~~d~~~i~~~v~lv-~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~ 271 (825)
||+..+++++++++ -.++.....+.++..++|.+. .+..++|+|||++++|+++||+|||+|.|++||+|||||++++
T Consensus 173 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l-~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~ 251 (723)
T 3j09_A 173 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGL-QAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE 251 (723)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHT-SCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEE
Confidence 67766655444332 111111111112233444333 4678999999999999999999999999999999999999999
Q ss_pred cCcceecCCCCCCCCCeeeecCCCCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHHHHH
Q 003371 272 GHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTI 351 (825)
Q Consensus 272 g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i 351 (825)
|++ .||||+|||||.|+.|. .++.+|+||.+.+|.+.++|+++|.+|.+|++++++.+...+++|+|+.+++++.++
T Consensus 252 G~~-~VdeS~LTGES~pv~K~--~g~~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~ 328 (723)
T 3j09_A 252 GES-YVDESMISGEPVPVLKS--KGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYF 328 (723)
T ss_dssp CCE-EEECHHHHCCSSCEEEC--TTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHH
T ss_pred CCe-EEecccccCCCcceeec--CCCeeccceEEecCcEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHH
Confidence 987 89999999999999998 588999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 003371 352 GKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKR 431 (825)
Q Consensus 352 ~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~ 431 (825)
.++.+++++++|++|. +... . .+...+..++++++++|||+|++++|++++.++.+
T Consensus 329 ~~~vl~~a~~~~~~~~---~~~~-------~--------------~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~ 384 (723)
T 3j09_A 329 IPTVLLVAISAFIYWY---FIAH-------A--------------PLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGK 384 (723)
T ss_dssp HHHHHHHHHHHHTTSC---SSTT-------C--------------TTCCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH---HhcC-------C--------------cHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 9988888887776542 1110 0 11234677899999999999999999999999999
Q ss_pred HhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccccccccCChHHHHHHHHHHhhcCCccccccC
Q 003371 432 MMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLK 511 (825)
Q Consensus 432 m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~ 511 (825)
++++|+++|+++++|+||++++||||||||||+|+|+|.+++..+.. ..+++.....+.
T Consensus 385 ~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~------------~~~~l~~aa~~e--------- 443 (723)
T 3j09_A 385 GAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD------------ERELLRLAAIAE--------- 443 (723)
T ss_dssp HHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSSC------------HHHHHHHHHHHH---------
T ss_pred HHHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeCCCC------------HHHHHHHHHHHh---------
Confidence 99999999999999999999999999999999999999999875421 112222222111
Q ss_pred CCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhccc
Q 003371 512 PGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSH 591 (825)
Q Consensus 512 ~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~ 591 (825)
..+.||.+.|+++++. +.|...... .+|.+...+ ++.. ..+.+|+++.+.+.+..
T Consensus 444 ------~~s~hP~~~Ai~~~a~-~~~~~~~~~---------~~~~~~~g~-g~~~--------~~~~~g~~~~~~~~~~~ 498 (723)
T 3j09_A 444 ------RRSEHPIAEAIVKKAL-EHGIELGEP---------EKVEVIAGE-GVVA--------DGILVGNKRLMEDFGVA 498 (723)
T ss_dssp ------TTCCSHHHHHHHHHHH-HTTCCCCSC---------CCCEEETTT-EEEE--------TTEEEECHHHHHHTTCC
T ss_pred ------ccCCCchhHHHHHHHH-hcCCCcCCc---------cceEEecCC-ceEE--------EEEEECCHHHHHhcCCC
Confidence 1256999999999997 666543211 122211111 1111 12356888776543211
Q ss_pred ccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHH
Q 003371 592 YYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQ 671 (825)
Q Consensus 592 ~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~ 671 (825)
..+.+.+.+++++.+|+|++++|+ +++++|+++++|++||+++
T Consensus 499 --------------~~~~~~~~~~~~~~~g~~~~~va~-----------------------~~~~~G~i~i~D~~~~~~~ 541 (723)
T 3j09_A 499 --------------VSNEVELALEKLEREAKTAVIVAR-----------------------NGRVEGIIAVSDTLKESAK 541 (723)
T ss_dssp --------------CCHHHHHHHHHHHTTTCEEEEEEE-----------------------TTEEEEEEEEECCSCTTHH
T ss_pred --------------ccHHHHHHHHHHHhcCCeEEEEEE-----------------------CCEEEEEEeecCCcchhHH
Confidence 123567788899999999999997 5689999999999999999
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHH
Q 003371 672 KAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLM 751 (825)
Q Consensus 672 ~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~l 751 (825)
++|+.|+++|++++|+|||+..+|.++|+++||.. ++++++|+||..+
T Consensus 542 ~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~--------------------------------~~~~~~P~~K~~~ 589 (723)
T 3j09_A 542 PAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL--------------------------------VIAEVLPHQKSEE 589 (723)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE--------------------------------EECSCCTTCHHHH
T ss_pred HHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcE--------------------------------EEccCCHHHHHHH
Confidence 99999999999999999999999999999999964 8999999999999
Q ss_pred HHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhcccc
Q 003371 752 VQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCF 823 (825)
Q Consensus 752 V~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~ 823 (825)
|+.||++ +.|+|+|||.||+|||++|||||||| +|+++|+++||+|+++||+..|++++++||++|.||.
T Consensus 590 v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~ 659 (723)
T 3j09_A 590 VKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 659 (723)
T ss_dssp HHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECC-CCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcC-CeEEEEECChhhHHHHhhCCEEEEeC-CCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999988 89999999999999999999999999 8999999999999999999999999999999999984
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=8.4e-32 Score=285.45 Aligned_cols=258 Identities=26% Similarity=0.376 Sum_probs=194.9
Q ss_pred HHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccccccccCChHHHHHHHHHHhhcCCcc
Q 003371 427 YSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGS 506 (825)
Q Consensus 427 ~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~ 506 (825)
.++.++++.|+|+|+..++|.|+++++||||||||||+|+|.|.+++ .. ...+.++. .
T Consensus 4 ~a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~-~~------------~~~l~~~~---------~ 61 (263)
T 2yj3_A 4 SLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI-GD------------SLSLAYAA---------S 61 (263)
Confidence 37789999999999999999999999999999999999999998874 00 01111111 0
Q ss_pred ccccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHH
Q 003371 507 VSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIIL 586 (825)
Q Consensus 507 ~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il 586 (825)
....+.||...|+..++. +.|...... ..|... .|..+...+.|....+
T Consensus 62 ---------~e~~s~hp~a~ai~~~~~-~~g~~~~~~---------~~~~~~-----------~G~g~~~~~~~~~~~~- 110 (263)
T 2yj3_A 62 ---------VEALSSHPIAKAIVKYAK-EQGVKILEV---------KDFKEI-----------SGIGVRGKISDKIIEV- 110 (263)
Confidence 112367899999988775 444321110 001000 0000110011100000
Q ss_pred HhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCC
Q 003371 587 AMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPC 666 (825)
Q Consensus 587 ~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~Dpl 666 (825)
|. ..++.+ +.+++ +-.+.|.+.+.|++
T Consensus 111 ----------G~-------------------~~~~~~-~~~~~-----------------------~~~~~~~~~~~~~~ 137 (263)
T 2yj3_A 111 ----------KK-------------------AENNND-IAVYI-----------------------NGEPIASFNISDVP 137 (263)
Confidence 00 001222 22222 23578999999999
Q ss_pred cccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHH
Q 003371 667 RPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPF 746 (825)
Q Consensus 667 R~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~ 746 (825)
+|+++++++.|+++|+++.|+|||+..++..+++++||.. +|+...|+
T Consensus 138 ~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~--------------------------------~f~~~~p~ 185 (263)
T 2yj3_A 138 RPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE--------------------------------YYSNLSPE 185 (263)
Confidence 9999999999999999999999999999999999999854 57777899
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhcccc
Q 003371 747 DKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCF 823 (825)
Q Consensus 747 dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~ 823 (825)
+|..+++.|+..++.|+|+|||.||++|++.|++|++|| .+++.+++.||++++++++..++.+++.+|+++.+|.
T Consensus 186 ~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g-~~~~~~~~~ad~v~~~~~l~~l~~~l~~~r~~~~~i~ 261 (263)
T 2yj3_A 186 DKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIP 261 (263)
Confidence 999999999998899999999999999999999999999 7899999999999999999999999999999999986
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.94 E-value=6.2e-26 Score=243.46 Aligned_cols=279 Identities=28% Similarity=0.370 Sum_probs=204.8
Q ss_pred HHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccccccccCChHHHHHHHHHHhhcCCccc
Q 003371 428 SMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSV 507 (825)
Q Consensus 428 ~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~ 507 (825)
+.+++++.|+++|++.++|+|+++++||||||||||.+.+.+.+++..+. . ...++.+ ..++
T Consensus 9 ~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~--~-------~~~~l~~---~~~~------ 70 (287)
T 3a1c_A 9 GSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG--D-------ERELLRL---AAIA------ 70 (287)
T ss_dssp -----CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS--C-------HHHHHHH---HHHH------
T ss_pred hHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC--C-------HHHHHHH---HHHH------
Confidence 57889999999999999999999999999999999999999998877543 1 1122222 1111
Q ss_pred cccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHH
Q 003371 508 SKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILA 587 (825)
Q Consensus 508 ~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~ 587 (825)
. ..+.||.+.|+..++. +.|.+.... +.+..++ .+++. . . .+.+|.++.+..
T Consensus 71 e---------~~s~hp~~~a~~~~~~-~~g~~~~~~----~~~~~~~------G~~~~--~---~---~~~~g~~~~~~~ 122 (287)
T 3a1c_A 71 E---------RRSEHPIAEAIVKKAL-EHGIELGEP----EKVEVIA------GEGVV--A---D---GILVGNKRLMED 122 (287)
T ss_dssp T---------TTCCSHHHHHHHHHHH-HTTCCCCCC----SCEEEET------TTEEE--E---T---TEEEECHHHHHH
T ss_pred h---------hcCCCHHHHHHHHHHH-hcCCCcccc----ccceeec------CCCeE--E---E---EEEECCHHHHHh
Confidence 1 1257999999999887 666542110 0011000 01111 0 1 123466554432
Q ss_pred hcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCc
Q 003371 588 MCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCR 667 (825)
Q Consensus 588 ~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR 667 (825)
.+. +++ ..+.+..+.+..+|.+++++++ +.++++.+...++++
T Consensus 123 ~~~----------~~~----~~~~~~~~~~~~~g~~~i~~~~-----------------------d~~~~~~~~~~~~~~ 165 (287)
T 3a1c_A 123 FGV----------AVS----NEVELALEKLEREAKTAVIVAR-----------------------NGRVEGIIAVSDTLK 165 (287)
T ss_dssp TTC----------CCC----HHHHHHHHHHHHTTCEEEEEEE-----------------------TTEEEEEEEEECCBC
T ss_pred cCC----------Ccc----HHHHHHHHHHHhCCCeEEEEEE-----------------------CCEEEEEEEeccccc
Confidence 211 111 2345567778889999999987 235888889999999
Q ss_pred ccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHH
Q 003371 668 PGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFD 747 (825)
Q Consensus 668 ~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~d 747 (825)
|+++++++.|+++|+++.++||++...+..+++.+|+.. +|....|..
T Consensus 166 ~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--------------------------------~f~~i~~~~ 213 (287)
T 3a1c_A 166 ESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL--------------------------------VIAEVLPHQ 213 (287)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE--------------------------------EECSCCTTC
T ss_pred hhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCce--------------------------------eeeecChHH
Confidence 999999999999999999999999999999999999854 566667899
Q ss_pred HHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhcccc
Q 003371 748 KLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCF 823 (825)
Q Consensus 748 K~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~ 823 (825)
|...++.|+.. +.++|+||+.||.+|++.|++++++| ++.+..++.+|+++.++++..+..+++++|+++.||.
T Consensus 214 K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 214 KSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp HHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEEC-CCSCCSSCCSSEEESSSCTHHHHHHHHTTC-------
T ss_pred HHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEEeC-CCCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHhhC
Confidence 99999999888 88999999999999999999999998 6777677889999999999999999999999999984
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.92 E-value=3.3e-25 Score=201.84 Aligned_cols=107 Identities=26% Similarity=0.477 Sum_probs=98.5
Q ss_pred HHHhchhCCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCcceecCCCCCCCCCeeeecCCCCceeee
Q 003371 222 DKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFS 301 (825)
Q Consensus 222 ~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l~VDES~LTGEs~pv~k~~~~~~~l~s 301 (825)
++|.++ .+..++|+|+|++++|++.+|+|||+|.|++||+|||||++++|+. .||||+|||||.|+.|. .++.+|+
T Consensus 4 ~~L~~l-~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~~-~vdeS~LTGEs~pv~k~--~g~~v~a 79 (113)
T 2hc8_A 4 KKLVGL-QAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKS--KGDEVFG 79 (113)
T ss_dssp HHHHHH-SCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCE-EEECHHHHCCSSCEEEC--TTCEECT
T ss_pred HHHhcC-CCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEceE-EEEccccCCCCccEEEC--CCCEEEe
Confidence 444433 4678999999999999999999999999999999999999999985 99999999999999998 5789999
Q ss_pred CceeeeceEEEEEEEEcccchHHHHHhhccC
Q 003371 302 GSKVADGYAQMLVVSVGMNTAWGEMMSSISS 332 (825)
Q Consensus 302 Gt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~ 332 (825)
||.+.+|.+.++|+++|.+|.+|+|++++.+
T Consensus 80 Gt~~~~G~~~~~V~~~g~~T~~~~i~~lv~~ 110 (113)
T 2hc8_A 80 ATINNTGVLKIRATRVGGETLLAQIVKLVED 110 (113)
T ss_dssp TCEECSSCEEEEEEECGGGSHHHHHHHHHHH
T ss_pred CCEEeeceEEEEEEEecCcCHHHHHHHHHHH
Confidence 9999999999999999999999999988753
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=9.2e-25 Score=202.43 Aligned_cols=115 Identities=25% Similarity=0.392 Sum_probs=101.5
Q ss_pred HHHHHHHHHHhchhCCCeeEEEeCCE------EEEEEecCcccCeEEEeCCCCeeeceEEEEecCcceecCCCCCCCCCe
Q 003371 215 FRQARQFDKLSKISNNIKVEVVREAR------RLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDH 288 (825)
Q Consensus 215 ~~~~~~~~~l~~~~~~~~v~V~R~g~------~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l~VDES~LTGEs~p 288 (825)
++..+..++|.++ .+..++|+|+|+ ++.|++.+|+|||+|.|++||+|||||++++|++ .||||+|||||.|
T Consensus 3 ~ka~~~l~~L~~l-~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~~-~vdeS~LTGEs~p 80 (124)
T 2kij_A 3 FTMSEALAKLISL-QATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITGEAMP 80 (124)
T ss_dssp ---CCHHHHHHHT-CCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCCC-EEECTTTTCCSSC
T ss_pred HHHHHHHHHHhcc-CCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEccE-EEEeccccCCCcc
Confidence 3445556666544 467899999764 6899999999999999999999999999999998 8999999999999
Q ss_pred eeecCCCCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCC
Q 003371 289 VEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSD 333 (825)
Q Consensus 289 v~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~ 333 (825)
+.|. .++.+|+||.+.+|.+.++|+++|.+|.+|+|++++.++
T Consensus 81 v~k~--~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 81 VAKK--PGSTVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp EECC--TTEEECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred EEeC--CCCEEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 9998 589999999999999999999999999999999998653
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-22 Score=214.93 Aligned_cols=268 Identities=26% Similarity=0.340 Sum_probs=195.2
Q ss_pred cccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccccccccCChHHHHHHHHHHhhcCCccccccCCCCCcce
Q 003371 439 VRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAE 518 (825)
Q Consensus 439 vr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~ 518 (825)
+|++.++|+|++++.||||++||||.|+|+|.+++..+.. ......++.. + . .
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~~---------~~~~~~~~~~-~--~---------------~ 53 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNHS---------EDELLQIAAS-L--E---------------A 53 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSSC---------HHHHHHHHHH-H--H---------------T
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCCC---------HHHHHHHHHH-h--h---------------c
Confidence 5889999999999999999999999999999998765431 1122222211 1 1 1
Q ss_pred ecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcccccccCCe
Q 003371 519 FSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGV 598 (825)
Q Consensus 519 ~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~ 598 (825)
.+.++...++.+++. +.|..... ...+...+ .+.....+ ++. .+..|.++.+...+...
T Consensus 54 ~s~~~~~~a~~~~~~-~~g~~~~~----~~~~~~~~----g~~~~~~~---~~~---~~~~~~~~~~~~~~~~~------ 112 (280)
T 3skx_A 54 RSEHPIAAAIVEEAE-KRGFGLTE----VEEFRAIP----GKGVEGIV---NGR---RYMVVSPGYIRELGIKT------ 112 (280)
T ss_dssp TCCSHHHHHHHHHHH-HTTCCCCC----CEEEEEET----TTEEEEEE---TTE---EEEEECHHHHHHTTCCC------
T ss_pred cCCCHHHHHHHHHHH-hcCCCCCC----ccceeecC----CCEEEEEE---CCE---EEEEecHHHHHHcCCCc------
Confidence 134678888888776 66654211 11111111 11111111 222 12336666665433211
Q ss_pred eecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHH
Q 003371 599 IKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQ 678 (825)
Q Consensus 599 ~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~ 678 (825)
. ..+..+..++.+.+.+++ +..++|.+.+.++++|+++++++.|+
T Consensus 113 ----~--------~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~l~~l~ 157 (280)
T 3skx_A 113 ----D--------ESVEKLKQQGKTVVFILK-----------------------NGEVSGVIALADRIRPESREAISKLK 157 (280)
T ss_dssp ----C--------TTHHHHHTTTCEEEEEEE-----------------------TTEEEEEEEEEEEECTTHHHHHHHHH
T ss_pred ----h--------HHHHHHHhCCCeEEEEEE-----------------------CCEEEEEEEecCCCCHhHHHHHHHHH
Confidence 0 123456677778777665 33588999999999999999999999
Q ss_pred hCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhC
Q 003371 679 SAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKK 758 (825)
Q Consensus 679 ~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~ 758 (825)
+.|+++.++||++...+..+++++|+.. .|....|.+|...++.+.+.
T Consensus 158 ~~g~~~~i~T~~~~~~~~~~~~~~gl~~--------------------------------~f~~~~~~~k~~~~k~~~~~ 205 (280)
T 3skx_A 158 AIGIKCMMLTGDNRFVAKWVAEELGLDD--------------------------------YFAEVLPHEKAEKVKEVQQK 205 (280)
T ss_dssp HTTCEEEEECSSCHHHHHHHHHHHTCSE--------------------------------EECSCCGGGHHHHHHHHHTT
T ss_pred HCCCEEEEEeCCCHHHHHHHHHHcCChh--------------------------------HhHhcCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999864 57788899999999999887
Q ss_pred CCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhcccc
Q 003371 759 GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCF 823 (825)
Q Consensus 759 g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~ 823 (825)
.+ ++|+||+.||.+|++.|++|++|| ++++.+++.||+++..+++..+..+++++|+++.++.
T Consensus 206 ~~-~~~vGD~~nDi~~~~~Ag~~va~~-~~~~~~~~~a~~~~~~~~~~~l~~~l~~~~~~~~~~~ 268 (280)
T 3skx_A 206 YV-TAMVGDGVNDAPALAQADVGIAIG-AGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFH 268 (280)
T ss_dssp SC-EEEEECTTTTHHHHHHSSEEEECS-CCSSSCCCSSSEECSSCCTHHHHHHHHHHHTCCC---
T ss_pred CC-EEEEeCCchhHHHHHhCCceEEec-CCcHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHH
Confidence 64 589999999999999999999999 7888899999999999999999999999999887764
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.84 E-value=7.8e-21 Score=186.53 Aligned_cols=134 Identities=25% Similarity=0.364 Sum_probs=112.3
Q ss_pred cCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcccccccCCee
Q 003371 520 SGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVI 599 (825)
Q Consensus 520 ~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~ 599 (825)
.+||+|.||+.++. ..+ ....+..|+++..+||+|++|||+|+++.+++ .+++++|||||.|+++|+.+. .+|..
T Consensus 32 ~~n~~d~Ail~~~~-~~~--~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g-~~~l~~KGApE~IL~~C~~~~-~~g~~ 106 (170)
T 3gwi_A 32 LKNLLDTAVLEGTD-EES--ARSLASRWQKIDEIPFDFERRRMSVVVAENTE-HHQLVCKGALQEILNVCSQVR-HNGEI 106 (170)
T ss_dssp CCCHHHHHHHHTSC-HHH--HHHHHHHSEEEEEECCCTTTCEEEEEEESSSS-EEEEEEEECHHHHHTTEEEEE-ETTEE
T ss_pred CCChHHHHHHHHHH-hcC--hhhhhhcCeEEeeEecCcccCcEEEEEEeCCC-CEEEEEcCCcHHHHHHhHHHh-cCCCc
Confidence 46999999999875 322 34567889999999999999999999976544 488999999999999999875 48899
Q ss_pred ecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCC
Q 003371 600 KSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDP 665 (825)
Q Consensus 600 ~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~Dp 665 (825)
.|++++.++.+.+.+++|+++|+|||++|||+++..+... ....|++|+|+|++||-|.
T Consensus 107 ~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~-------~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 107 VPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDY-------QRADESDLILEGYIAFLDH 165 (170)
T ss_dssp EECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCC-------CGGGSCSEEEEEEEEEEC-
T ss_pred ccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCcccc-------CccccCCcEEEehhccccc
Confidence 9999999999999999999999999999999996532111 1235899999999999885
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.83 E-value=8.1e-22 Score=212.45 Aligned_cols=146 Identities=15% Similarity=0.179 Sum_probs=116.8
Q ss_pred ccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhc--cCeeE
Q 003371 662 IKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKV--DKIRV 739 (825)
Q Consensus 662 i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~--~~~~V 739 (825)
..+++|||++++++.|+++|++|+|+|||+..+++++|+++|+...+... .-...++ +++++...+ +.+.+
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i----~~n~l~~---~~~~~~~~~~~~~i~~ 210 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKV----VSNFMDF---DENGVLKGFKGELIHV 210 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEE----EEECEEE---CTTSBEEEECSSCCCT
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceE----EeeeEEE---cccceeEeccccccch
Confidence 46899999999999999999999999999999999999999997542111 0000001 111110001 22346
Q ss_pred EEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHH---hhhCCccEecCC------CchHHHHHhcCeeeccCCchHHHH
Q 003371 740 MARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPA---LKEADVGLSMGI------QGTEVAKESSDIVILDDDFTSVAT 810 (825)
Q Consensus 740 ~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapA---Lk~AdVGiamg~------~gt~vAk~aaDivlldd~f~sIv~ 810 (825)
+++..|.+|...+..+++.++.|+|+|||+||+|| |+.||||||||. +|++++++++||||+||+|.+|+.
T Consensus 211 ~~k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~ 290 (297)
T 4fe3_A 211 FNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVN 290 (297)
T ss_dssp TCHHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHH
T ss_pred hhcccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHH
Confidence 78889999999999999999999999999999999 559999999995 688888999999999999999999
Q ss_pred HHHH
Q 003371 811 VLSP 814 (825)
Q Consensus 811 ~i~~ 814 (825)
+|..
T Consensus 291 ~il~ 294 (297)
T 4fe3_A 291 SILQ 294 (297)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8753
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.30 E-value=3.4e-12 Score=127.65 Aligned_cols=116 Identities=16% Similarity=0.263 Sum_probs=99.4
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHH
Q 003371 673 AVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMV 752 (825)
Q Consensus 673 aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV 752 (825)
+++.|+++|+++.++||++...+..+++++||.. +|... .+|...+
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~--------------------------------~f~~~--~~K~~~~ 99 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH--------------------------------LFQGR--EDKLVVL 99 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE--------------------------------EECSC--SCHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH--------------------------------HhcCc--CChHHHH
Confidence 9999999999999999999999999999999964 23222 5676777
Q ss_pred HHHHhC----CCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCC----chHHHHHHHHhHHhhcccc
Q 003371 753 QCLKKK----GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDD----FTSVATVLSPGDQLHSGCF 823 (825)
Q Consensus 753 ~~Lq~~----g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~----f~sIv~~i~~gR~i~~ni~ 823 (825)
+.+.++ .+.++|+||+.||.+|++.|++|++|+ ++.+.+++.||+++.+++ +..+.+.+...|..|.+|.
T Consensus 100 ~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~ 177 (189)
T 3mn1_A 100 DKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVA-NAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAH 177 (189)
T ss_dssp HHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHH
Confidence 666654 467999999999999999999999999 789999999999998764 7788888999988888773
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.24 E-value=5.9e-12 Score=126.47 Aligned_cols=118 Identities=18% Similarity=0.184 Sum_probs=96.1
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHH
Q 003371 672 KAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLM 751 (825)
Q Consensus 672 ~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~l 751 (825)
.+|+.|+++|+++.++||++...+..+++++||.. +|... ..|...
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~--------------------------------~~~~~--k~k~~~ 104 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL--------------------------------IYQGQ--DDKVQA 104 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE--------------------------------EECSC--SSHHHH
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE--------------------------------EeeCC--CCcHHH
Confidence 35999999999999999999999999999999964 23333 346666
Q ss_pred HHHHHhC----CCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCC----chHHHHHHHHhHHhhcccc
Q 003371 752 VQCLKKK----GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDD----FTSVATVLSPGDQLHSGCF 823 (825)
Q Consensus 752 V~~Lq~~----g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~----f~sIv~~i~~gR~i~~ni~ 823 (825)
++.+.++ .+.++|+||+.||.+|++.|+++++|+ ++.+.+++.||+|+.+++ +..+.+.+...|..|+++.
T Consensus 105 ~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~-na~~~~~~~ad~v~~~~~~~G~~~~~~~~il~~~~~~~~~~ 183 (195)
T 3n07_A 105 YYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVA-DGHPLLAQRANYVTHIKGGHGAVREVCDLILQARNELDVHK 183 (195)
T ss_dssp HHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCHHHHHHCSEECSSCTTTTHHHHHHHHHHHHTTSSCCC-
T ss_pred HHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEEC-ChHHHHHHhCCEEEcCCCCCCHHHHHHHHHHHhcccHHHHH
Confidence 6555443 356899999999999999999999999 899999999999998765 5567777777888888765
Q ss_pred C
Q 003371 824 C 824 (825)
Q Consensus 824 ~ 824 (825)
.
T Consensus 184 ~ 184 (195)
T 3n07_A 184 G 184 (195)
T ss_dssp -
T ss_pred H
Confidence 4
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.21 E-value=3.9e-11 Score=130.97 Aligned_cols=144 Identities=15% Similarity=0.174 Sum_probs=105.2
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCccccccc--ccceeeechhhhcCCHHHHHhhccCeeEEE
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQV--EKGEVVEGVEFRNYTDEERIQKVDKIRVMA 741 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~--~~~~vi~G~~~~~~~~~~~~~~~~~~~V~a 741 (825)
-+++|++.++++.|+++|+++.|+||+....+..+++++|+....... .....++|.-... .+.+
T Consensus 177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~-------------~~~~ 243 (335)
T 3n28_A 177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGE-------------VVSA 243 (335)
T ss_dssp CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESC-------------CCCH
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeeccc-------------ccCh
Confidence 378999999999999999999999999999999999999996421100 0000001100000 0111
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhcc
Q 003371 742 RSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSG 821 (825)
Q Consensus 742 r~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~n 821 (825)
+..|+-...+.+.+.-..+.++|+|||.||.+|++.|++|++| ++.+..++.||.++..+++..|..+++......++
T Consensus 244 kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~--~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r 321 (335)
T 3n28_A 244 QTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY--HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQK 321 (335)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTC
T ss_pred hhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhh
Confidence 2333334444444443356799999999999999999999999 68999999999999999999999999877665555
Q ss_pred c
Q 003371 822 C 822 (825)
Q Consensus 822 i 822 (825)
|
T Consensus 322 ~ 322 (335)
T 3n28_A 322 L 322 (335)
T ss_dssp C
T ss_pred h
Confidence 5
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.17 E-value=1.2e-10 Score=119.81 Aligned_cols=151 Identities=15% Similarity=0.124 Sum_probs=109.2
Q ss_pred cCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceee--echhh-hc---------------
Q 003371 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVV--EGVEF-RN--------------- 724 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi--~G~~~-~~--------------- 724 (825)
...+.|+++++|++|+++|+++.++||++...+..+++++|+..+-...++..+. +|+.+ ..
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~ 99 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 99 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999999999985421111222232 23222 00
Q ss_pred ----------------------CCHHHHHhhcc--CeeEE-----EecCH--HHHHHHHHHHHhC-C---CEEEEEcCCc
Q 003371 725 ----------------------YTDEERIQKVD--KIRVM-----ARSSP--FDKLLMVQCLKKK-G---HVVAVTGDGT 769 (825)
Q Consensus 725 ----------------------~~~~~~~~~~~--~~~V~-----ar~sP--~dK~~lV~~Lq~~-g---~vVa~~GDG~ 769 (825)
..++++.+... .+.+. ....| .+|...++.+.+. | +.|+++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~ 179 (227)
T 1l6r_A 100 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 179 (227)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred hcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcH
Confidence 01111111111 23332 12234 6899988888764 2 4689999999
Q ss_pred cCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHH
Q 003371 770 NDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSP 814 (825)
Q Consensus 770 NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~ 814 (825)
||.+|++.|++|++|| ++.+..|+.||+++.+.+-..|.+++++
T Consensus 180 nD~~m~~~ag~~va~~-n~~~~~k~~a~~v~~~~~~~Gv~~~l~~ 223 (227)
T 1l6r_A 180 NDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 223 (227)
T ss_dssp GGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred HhHHHHHHcCceEEec-CchHHHHHhCCEEecCCCCcHHHHHHHH
Confidence 9999999999999999 7889999999999998888999988863
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.15 E-value=5.4e-11 Score=120.96 Aligned_cols=115 Identities=17% Similarity=0.225 Sum_probs=97.2
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHH
Q 003371 673 AVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMV 752 (825)
Q Consensus 673 aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV 752 (825)
+++.|+++|+++.++||++...+..+++++||.. +|... .+|...+
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~--------------------------------~f~~~--k~K~~~l 129 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH--------------------------------LYQGQ--SDKLVAY 129 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE--------------------------------EECSC--SSHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch--------------------------------hhccc--CChHHHH
Confidence 9999999999999999999999999999999964 33333 5677777
Q ss_pred HHHHhC----CCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCC----chHHHHHHHHhHHhhccc
Q 003371 753 QCLKKK----GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDD----FTSVATVLSPGDQLHSGC 822 (825)
Q Consensus 753 ~~Lq~~----g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~----f~sIv~~i~~gR~i~~ni 822 (825)
+.+.++ .+.++|+||+.||.+|++.|+++++|+ ++.+.+++.||+|+.+.+ +..+.+.+...+..|+++
T Consensus 130 ~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~-~~~~~~~~~Ad~v~~~~~~~G~v~e~~~~ll~~~~~~~~~ 206 (211)
T 3ij5_A 130 HELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVA-DAHPLLLPKAHYVTRIKGGRGAVREVCDLILLAQDKLEGA 206 (211)
T ss_dssp HHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTTHHHHHHHHHHHHTTCTTTC
T ss_pred HHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeC-CccHHHHhhCCEEEeCCCCCcHHHHHHHHHHHHcCcHHHH
Confidence 776654 567999999999999999999999999 688999999999998764 566777777777767664
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.08 E-value=1.8e-10 Score=115.20 Aligned_cols=117 Identities=13% Similarity=0.153 Sum_probs=95.7
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEE--ecCHHHHHH
Q 003371 673 AVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMA--RSSPFDKLL 750 (825)
Q Consensus 673 aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~a--r~sP~dK~~ 750 (825)
+++.|+++|+++.++||+....+..+++++|+.. +|. ...|+-...
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~--------------------------------~~~~~kpk~~~~~~ 101 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH--------------------------------YYKGQVDKRSAYQH 101 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE--------------------------------EECSCSSCHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc--------------------------------ceeCCCChHHHHHH
Confidence 4999999999999999999999999999999964 222 234555555
Q ss_pred HHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCC----chHHHHHHHHhHHhhccc
Q 003371 751 MVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDD----FTSVATVLSPGDQLHSGC 822 (825)
Q Consensus 751 lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~----f~sIv~~i~~gR~i~~ni 822 (825)
+.+.+.-..+.++|+||+.||.+|++.|+++++|+ ++.+.+++.||+++.+++ +..+.+.+...|..|+++
T Consensus 102 ~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~ 176 (191)
T 3n1u_A 102 LKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVS-NAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELA 176 (191)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHH
Confidence 66655545567999999999999999999999999 788999999999999877 555666676677776654
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=4e-10 Score=111.44 Aligned_cols=122 Identities=15% Similarity=0.168 Sum_probs=96.1
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCH
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSP 745 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP 745 (825)
+.++..++|+.|+++|+++.++||++...+..+++++|+.. +|...
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~--------------------------------~~~~~-- 81 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------FFLGK-- 81 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE--------------------------------EEESC--
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce--------------------------------eecCC--
Confidence 34667899999999999999999999999999999999864 22222
Q ss_pred HHHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHH----HHHHHhHH
Q 003371 746 FDKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVA----TVLSPGDQ 817 (825)
Q Consensus 746 ~dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv----~~i~~gR~ 817 (825)
..|...++.+.++ | +.|+|+||+.||.+|++.|+++++|+ ++.+.+++.||+++.+.+...++ +.+...|.
T Consensus 82 k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~ 160 (180)
T 1k1e_A 82 LEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQG 160 (180)
T ss_dssp SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTT
T ss_pred CCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeC-CccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcC
Confidence 3456666555433 4 67999999999999999999999998 78899999999999887665555 33444555
Q ss_pred hhccc
Q 003371 818 LHSGC 822 (825)
Q Consensus 818 i~~ni 822 (825)
.|+++
T Consensus 161 ~~~~~ 165 (180)
T 1k1e_A 161 KSSVF 165 (180)
T ss_dssp CTHHH
T ss_pred chhhh
Confidence 55554
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.07 E-value=3.2e-10 Score=111.77 Aligned_cols=103 Identities=15% Similarity=0.142 Sum_probs=86.2
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHH
Q 003371 673 AVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMV 752 (825)
Q Consensus 673 aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV 752 (825)
+++.|+++|+++.++||+....+..+++++||. +++.. ..|...+
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~---------------------------------~~~~~--~~k~~~l 91 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP---------------------------------VLHGI--DRKDLAL 91 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC---------------------------------EEESC--SCHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe---------------------------------eEeCC--CChHHHH
Confidence 899999999999999999999999999999984 12222 4566776
Q ss_pred HHHHhC----CCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHH
Q 003371 753 QCLKKK----GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATV 811 (825)
Q Consensus 753 ~~Lq~~----g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~ 811 (825)
+.+.++ .+.++|+||+.||.+|++.|+++++|+ ++++.+++.||+++.+++..+++..
T Consensus 92 ~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~g~~~~ 153 (176)
T 3mmz_A 92 KQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVA-SAHDVVRGAARAVTTVPGGDGAIRE 153 (176)
T ss_dssp HHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHH
T ss_pred HHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECC-ChhHHHHHhCCEEecCCCCCcHHHH
Confidence 666554 366899999999999999999999999 7899999999999998885554443
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.01 E-value=2.9e-10 Score=111.17 Aligned_cols=109 Identities=17% Similarity=0.172 Sum_probs=87.8
Q ss_pred EEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH--HcCCcccccccccceeeechhhhcCCHHHHHh
Q 003371 655 TLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIAT--ECGILRLDQQVEKGEVVEGVEFRNYTDEERIQ 732 (825)
Q Consensus 655 ~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~--~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~ 732 (825)
..++.+.++|. .+|+.|+++|+++.|+||+ ..+..+++ ++||.
T Consensus 32 ~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~--------------------------- 76 (168)
T 3ewi_A 32 KEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK--------------------------- 76 (168)
T ss_dssp CCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC---------------------------
T ss_pred CEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE---------------------------
Confidence 45667777776 3899999999999999999 67888888 56653
Q ss_pred hccCeeEEEecCHHHHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchH
Q 003371 733 KVDKIRVMARSSPFDKLLMVQCLKKK----GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTS 807 (825)
Q Consensus 733 ~~~~~~V~ar~sP~dK~~lV~~Lq~~----g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~s 807 (825)
++. .+.+|...++.+.++ .+.++|+||+.||.+|++.|+++++|+ ++.+.+|+.||+|+.+++=..
T Consensus 77 ------~~~--g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~-na~~~~k~~Ad~v~~~~~~~G 146 (168)
T 3ewi_A 77 ------TEV--SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPA-DACSGAQKAVGYICKCSGGRG 146 (168)
T ss_dssp ------EEC--SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECT-TCCHHHHTTCSEECSSCTTTT
T ss_pred ------EEE--CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeC-ChhHHHHHhCCEEeCCCCCcc
Confidence 121 235688877777654 356899999999999999999999998 899999999999998665443
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=2.6e-09 Score=103.53 Aligned_cols=106 Identities=19% Similarity=0.200 Sum_probs=85.8
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHH
Q 003371 673 AVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMV 752 (825)
Q Consensus 673 aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV 752 (825)
+++.|+++|+++.++||++...+..+++++|+.. ++... ..|...+
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~--------------------------------~~~~~--kpk~~~~ 84 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY--------------------------------LFQGV--VDKLSAA 84 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE--------------------------------EECSC--SCHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE--------------------------------eeccc--CChHHHH
Confidence 8999999999999999999999999999999964 22222 3344444
Q ss_pred HHHHhC----CCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCC----chHHHHHHH
Q 003371 753 QCLKKK----GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDD----FTSVATVLS 813 (825)
Q Consensus 753 ~~Lq~~----g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~----f~sIv~~i~ 813 (825)
+.+.++ .+.++|+||+.||.+|++.|+++++++ ++.+.+++.||+++.+++ +..+++.+.
T Consensus 85 ~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~e~~~~ll 152 (164)
T 3e8m_A 85 EELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPA-SAPFYIRRLSTIFLEKRGGEGVFREFVEKVL 152 (164)
T ss_dssp HHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCT-TSCHHHHTTCSSCCCCCTTTTHHHHHHHHHT
T ss_pred HHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcC-ChHHHHHHhCcEEeccCCCCcHHHHHHHHHH
Confidence 444332 357899999999999999999999998 789999999999999988 444554443
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.88 E-value=4e-09 Score=118.54 Aligned_cols=138 Identities=15% Similarity=0.188 Sum_probs=106.7
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCccccccc--ccceeeechhhhcCCHHHHHhhccCeeEEEe
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQV--EKGEVVEGVEFRNYTDEERIQKVDKIRVMAR 742 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~--~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar 742 (825)
+++||+.+.++.|++.|+++.++||.....+..+++++|+....... .....++|..... -
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~-----------------v 318 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLTGRVVGP-----------------I 318 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEEEEEECSS-----------------C
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEEEeeEccC-----------------C
Confidence 78999999999999999999999999999999999999995321000 0000111110000 0
Q ss_pred cCHHHHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHh
Q 003371 743 SSPFDKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQL 818 (825)
Q Consensus 743 ~sP~dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i 818 (825)
..+..|..+++.+.++ | +.+.|+|||.||.+|++.|++|+++ ++.+..++.||+++..+++..+..++.++|.-
T Consensus 319 ~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~--~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~ 396 (415)
T 3p96_A 319 IDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF--NAKPALREVADASLSHPYLDTVLFLLGVTRGE 396 (415)
T ss_dssp CCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHH
T ss_pred CCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE--CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHH
Confidence 1256777777766554 3 5688999999999999999999999 57888899999999999999999999998876
Q ss_pred hcc
Q 003371 819 HSG 821 (825)
Q Consensus 819 ~~n 821 (825)
+.+
T Consensus 397 ~~~ 399 (415)
T 3p96_A 397 IEA 399 (415)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.84 E-value=4.1e-09 Score=106.32 Aligned_cols=135 Identities=16% Similarity=0.136 Sum_probs=96.7
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEe-
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMAR- 742 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar- 742 (825)
-+++|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.-.+-. ....+...
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f-----~~~~~~~~~~-----------~~~~~~~~~ 137 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAF-----SNTLIVENDA-----------LNGLVTGHM 137 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEE-----EEEEEEETTE-----------EEEEEEESC
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhc-----cceeEEeCCE-----------EEeeeccCC
Confidence 468999999999999999999999999999999999999986421 1111100000 00000010
Q ss_pred cCHHHHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhH
Q 003371 743 SSPFDKLLMVQCLKKK----GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGD 816 (825)
Q Consensus 743 ~sP~dK~~lV~~Lq~~----g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR 816 (825)
..+..|...++.+.++ .+.+.++||+.||.+|++.|+++++| ++.+..++.||+|+.++||..+..++.|-.
T Consensus 138 ~~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~--~~~~~l~~~ad~v~~~~dl~~~~~~~~~~~ 213 (217)
T 3m1y_A 138 MFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF--NAKEVLKQHATHCINEPDLALIKPLIEGHH 213 (217)
T ss_dssp CSTTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE--SCCHHHHTTCSEEECSSBGGGGTTC-----
T ss_pred CCCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE--CccHHHHHhcceeecccCHHHHHHHhcccc
Confidence 1234566666555443 35688999999999999999999999 577888999999999999999998888753
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.84 E-value=7.5e-09 Score=112.71 Aligned_cols=150 Identities=19% Similarity=0.202 Sum_probs=103.9
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeech------------------hhhcCC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGV------------------EFRNYT 726 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~------------------~~~~~~ 726 (825)
+++++++++++.|++ |+.+.++||++...+..+.+.+|+.... ....+.-. .+....
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 177 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGEL----HGTEVDFDSIAVPEGLREELLSIIDVIASLSG 177 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEE----EEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhh----cccccchhhhccccccceeEEecCHHHHhhhh
Confidence 568999999999999 9999999999977777888888874210 00001100 011000
Q ss_pred HHHHHhhccCe-------eEE---EecCHHHHHHHHHHHHhCC--CEEEEEcCCccCHHHhhhC----CccEecCCCchH
Q 003371 727 DEERIQKVDKI-------RVM---ARSSPFDKLLMVQCLKKKG--HVVAVTGDGTNDAPALKEA----DVGLSMGIQGTE 790 (825)
Q Consensus 727 ~~~~~~~~~~~-------~V~---ar~sP~dK~~lV~~Lq~~g--~vVa~~GDG~NDapALk~A----dVGiamg~~gt~ 790 (825)
++++ +.++.+ .+. --..+.+|...++.+.... ++|+++|||.||.+||+.| ++|+|| ++.+
T Consensus 178 ~~~l-~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam--na~~ 254 (332)
T 1y8a_A 178 EELF-RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF--NGNE 254 (332)
T ss_dssp HHHH-HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--SCCH
T ss_pred HHHH-HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe--cCCH
Confidence 0111 111110 000 0113567988888776543 6699999999999999999 999999 6899
Q ss_pred HHHHhcCeeeccCCchHHHHH----HHHhHHhhcccc
Q 003371 791 VAKESSDIVILDDDFTSVATV----LSPGDQLHSGCF 823 (825)
Q Consensus 791 vAk~aaDivlldd~f~sIv~~----i~~gR~i~~ni~ 823 (825)
.+|+.||+|+.+++...|..+ +..||..+ |+.
T Consensus 255 ~lk~~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~-~~~ 290 (332)
T 1y8a_A 255 YALKHADVVIISPTAMSEAKVIELFMERKERAF-EVL 290 (332)
T ss_dssp HHHTTCSEEEECSSTHHHHHHHHHHHHHGGGGG-GGG
T ss_pred HHHhhCcEEecCCCCCHHHHHHHHHHHcCCchh-HHH
Confidence 999999999999899777666 56688887 654
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.77 E-value=9.6e-09 Score=111.04 Aligned_cols=132 Identities=15% Similarity=0.212 Sum_probs=96.9
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEE-ec
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMA-RS 743 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~a-r~ 743 (825)
+++||+.+.++.|+++|+++.++||.....+..+++.+|+...... ....++..+.. .+.. -.
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~---~l~~~dg~~tg-------------~i~~~~~ 242 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSN---TVEIRDNVLTD-------------NITLPIM 242 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE---CEEEETTEEEE-------------EECSSCC
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEE---EEEeeCCeeee-------------eEecccC
Confidence 4899999999999999999999999999999999999999642110 00000000000 0000 01
Q ss_pred CHHHHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHH
Q 003371 744 SPFDKLLMVQCLKKK----GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSP 814 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~----g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~ 814 (825)
.+..|..+++.+.++ .+.+.|+||+.||.+|++.|++|++++ +.+..++.||.++..+++..+..++++
T Consensus 243 ~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~~--~~~~~~~~a~~~i~~~~L~~ll~~L~~ 315 (317)
T 4eze_A 243 NAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAWK--AKPVVREKIHHQINYHGFELLLFLIED 315 (317)
T ss_dssp CHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEES--CCHHHHHHCCEEESSSCGGGGGGGTCS
T ss_pred CCCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEeC--CCHHHHHhcCeeeCCCCHHHHHHHHHh
Confidence 345666666555432 356899999999999999999999994 677888999999999999998877643
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.74 E-value=3.7e-08 Score=103.96 Aligned_cols=67 Identities=33% Similarity=0.478 Sum_probs=58.2
Q ss_pred HHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHH
Q 003371 747 DKLLMVQCLKKK----GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSP 814 (825)
Q Consensus 747 dK~~lV~~Lq~~----g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~ 814 (825)
.|...++.+.++ .+-|+++||+.||.+|++.|++|+||| ++.+.+|++||+|..+++=..|.++|++
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 4dw8_A 197 DKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMG-NAQEPVKKAADYITLTNDEDGVAEAIER 267 (279)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcC-CCcHHHHHhCCEEcCCCCCcHHHHHHHH
Confidence 677777776654 245899999999999999999999999 8999999999999998888899988864
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.71 E-value=1.3e-07 Score=100.20 Aligned_cols=68 Identities=24% Similarity=0.329 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHH
Q 003371 746 FDKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSP 814 (825)
Q Consensus 746 ~dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~ 814 (825)
..|...++.+.++ | +-|+++||+.||.+|++.|++|+||| ++.+..|+.||+|..+++=..|.++|+.
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMG-NAVPEIKRKADWVTRSNDEQGVAYMMKE 272 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEec-CCcHHHHHhcCEECCCCCccHHHHHHHH
Confidence 3577777777654 2 45899999999999999999999999 8999999999999988888889888764
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=2.6e-08 Score=99.03 Aligned_cols=107 Identities=17% Similarity=0.220 Sum_probs=84.4
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHH
Q 003371 672 KAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLM 751 (825)
Q Consensus 672 ~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~l 751 (825)
.+++.|+++|+++.++||++...+..+++++|+.. +|... ..|...
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~--------------------------------~~~~~--kpk~~~ 105 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH--------------------------------LYQGQ--SNKLIA 105 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE--------------------------------EECSC--SCSHHH
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce--------------------------------eecCC--CCCHHH
Confidence 48999999999999999999999999999999864 22222 234445
Q ss_pred HHHHHh-CC---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHH-HHHH
Q 003371 752 VQCLKK-KG---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVA-TVLS 813 (825)
Q Consensus 752 V~~Lq~-~g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv-~~i~ 813 (825)
++.+.+ .| +.++|+||+.||.++++.|+++++++ ++.+.+++.||+++.+.+-..++ .+++
T Consensus 106 ~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 106 FSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp HHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEec-CcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 544433 24 57899999999999999999999998 67777888999999877555555 5443
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=2.2e-08 Score=100.14 Aligned_cols=129 Identities=18% Similarity=0.255 Sum_probs=89.8
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEe-
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMAR- 742 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar- 742 (825)
-++.|+++++++.|++.|+++.++||+....+..+.+++|+..... .........+ ...+...
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-------------~~~~~~~~ 138 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFA---NRLIVKDGKL-------------TGDVEGEV 138 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEE---EEEEEETTEE-------------EEEEECSS
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEE---eeeEEECCEE-------------cCCcccCc
Confidence 3567899999999999999999999999998888999998743100 0011100000 0001001
Q ss_pred cCHHHHHHHHHHHHh-CC---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHH
Q 003371 743 SSPFDKLLMVQCLKK-KG---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVAT 810 (825)
Q Consensus 743 ~sP~dK~~lV~~Lq~-~g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~ 810 (825)
..+..|...+..+.+ .| +.+.++||+.||.+|++.|+++++|+ +.+..++.||.++.++++..+..
T Consensus 139 ~~~~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~--~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 139 LKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC--AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp CSTTHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES--CCHHHHTTCSEEECSSCGGGGGG
T ss_pred cCCccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC--CCHHHHhhcceeecchhHHHHHH
Confidence 123567665555543 33 45899999999999999999999998 45666889999998777876654
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.65 E-value=4.8e-08 Score=103.09 Aligned_cols=66 Identities=29% Similarity=0.367 Sum_probs=46.9
Q ss_pred HHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 747 DKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 747 dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
+|...++.|.+. | +-|+++||+.||.+|++.|++|+||| ++.+..|+.||.|..+++=..|.++|+
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMG-NAIDEVKEAAQAVTLTNAENGVAAAIR 266 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC----CCHHHHHCSCBC------CHHHHHC
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeecc-CCCHHHHHhcceeccCCCccHHHHHHH
Confidence 477777776654 2 45899999999999999999999999 899999999999998888788888774
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.63 E-value=1.3e-07 Score=100.41 Aligned_cols=67 Identities=27% Similarity=0.252 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCe--eeccCCchHHHHHHH
Q 003371 746 FDKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDI--VILDDDFTSVATVLS 813 (825)
Q Consensus 746 ~dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDi--vlldd~f~sIv~~i~ 813 (825)
..|..-++.|.+. | +-|+++||+.||.+|++.|++|+||| ++.+..|++||. |..+++=..|.++|+
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~-Na~~~vk~~A~~~~v~~sn~edGva~~i~ 280 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMA-NAHQRLKDLHPELEVIGSNADDAVPRYLR 280 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCTTSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEcc-CCCHHHHHhCCCCEecccCCcchHHHHHH
Confidence 3587777777654 3 45899999999999999999999999 899999999994 666777788888875
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.62 E-value=1.1e-07 Score=91.85 Aligned_cols=110 Identities=14% Similarity=0.154 Sum_probs=86.3
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
.+.|++.++++.|++.|+++.++||.+...+..+.+++|+.. .|....
T Consensus 36 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--------------------------------~~~~~k 83 (162)
T 2p9j_A 36 VFNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE--------------------------------IYTGSY 83 (162)
T ss_dssp EEEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE--------------------------------EEECC-
T ss_pred eecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh--------------------------------hccCCC
Confidence 346788999999999999999999999999999999999853 222222
Q ss_pred HHHHHHHHH-HHHhC---CCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHH
Q 003371 745 PFDKLLMVQ-CLKKK---GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVA 809 (825)
Q Consensus 745 P~dK~~lV~-~Lq~~---g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv 809 (825)
| |...++ .+++. .+.+.|+||+.||.++++.|+++++++ ++.+..++.||+++.+.+-..++
T Consensus 84 p--~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~a~~v~~~~~~~g~~ 149 (162)
T 2p9j_A 84 K--KLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVR-NAVEEVRKVAVYITQRNGGEGAL 149 (162)
T ss_dssp ---CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECSSCSSSSHH
T ss_pred C--CHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEec-CccHHHHhhCCEEecCCCCCcHH
Confidence 2 333332 23332 456899999999999999999999998 67888889999999887766655
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.59 E-value=2.5e-07 Score=94.98 Aligned_cols=150 Identities=21% Similarity=0.205 Sum_probs=102.5
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeee-ch-------------------hh-
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVE-GV-------------------EF- 722 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~-G~-------------------~~- 722 (825)
..+.+.+.+++++++++|+.+.++||.....+..+.+++|+..+....++..+.. |+ ++
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~ 98 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 98 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCC
Confidence 3467889999999999999999999999999999999998743111111111111 11 00
Q ss_pred --h-----------------cCCHHHHHhh---c-cCeeEE-----EecCH--HHHHHHHHHHHhC-C---CEEEEEcCC
Q 003371 723 --R-----------------NYTDEERIQK---V-DKIRVM-----ARSSP--FDKLLMVQCLKKK-G---HVVAVTGDG 768 (825)
Q Consensus 723 --~-----------------~~~~~~~~~~---~-~~~~V~-----ar~sP--~dK~~lV~~Lq~~-g---~vVa~~GDG 768 (825)
. +...+...+. + ..+.+. ....| ..|...++.+.++ | +.|+++||+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~ 178 (231)
T 1wr8_A 99 NARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 178 (231)
T ss_dssp TCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred CceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCC
Confidence 0 0022222221 1 123333 12222 3687787777653 2 468899999
Q ss_pred ccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHH
Q 003371 769 TNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSP 814 (825)
Q Consensus 769 ~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~ 814 (825)
.||.+|++.|++|++|| ++.+..|+.||+++.+.+-..+.+++++
T Consensus 179 ~nD~~~~~~ag~~v~~~-~~~~~~~~~a~~v~~~~~e~Gv~~~l~~ 223 (231)
T 1wr8_A 179 ENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYH 223 (231)
T ss_dssp GGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEec-CCCHHHHhhCCEEecCCCcchHHHHHHH
Confidence 99999999999999999 6788889999999887776778888754
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.57 E-value=3.3e-08 Score=97.96 Aligned_cols=119 Identities=20% Similarity=0.334 Sum_probs=91.7
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
+++|++.+.++.|++.|+++.++|+++...+..+ +.+|+... . .........+ --....
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~---~~~~~~~~~~----------------~~~~~~ 137 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-A---NRAIFEDGKF----------------QGIRLR 137 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-E---EEEEEETTEE----------------EEEECC
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-e---eeEEeeCCce----------------ECCcCC
Confidence 7899999999999999999999999999888888 88887532 0 0111111100 013456
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
|..|...++.+ ..+.+.++||+.||.+|++.|++|++|+ ++.+ .||+++. ++..+..+++
T Consensus 138 ~~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~-~~~~----~ad~v~~--~~~el~~~l~ 197 (201)
T 4ap9_A 138 FRDKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVG-REIP----GADLLVK--DLKELVDFIK 197 (201)
T ss_dssp SSCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEES-SCCT----TCSEEES--SHHHHHHHHH
T ss_pred ccCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEEC-CCCc----cccEEEc--cHHHHHHHHH
Confidence 77899988888 4566789999999999999999999999 5555 7999986 6777777764
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.55 E-value=5.3e-07 Score=93.97 Aligned_cols=67 Identities=27% Similarity=0.269 Sum_probs=56.7
Q ss_pred HHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHH
Q 003371 747 DKLLMVQCLKKK----GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSP 814 (825)
Q Consensus 747 dK~~lV~~Lq~~----g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~ 814 (825)
.|..-++.|.+. .+-|+++||+.||.+||+.|++|+||| ++.+..|+.||.|..+.+-..|.++++.
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~dGva~~i~~ 253 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMG-NAHEEVKRVADFVTKPVDKEGIWYGLKQ 253 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEET-TCCHHHHHTCSEEECCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeC-CCcHHHHHhCCEEeCCCCcchHHHHHHH
Confidence 466556666543 345889999999999999999999999 8999999999999988888899998863
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.55 E-value=1.6e-07 Score=95.96 Aligned_cols=130 Identities=24% Similarity=0.302 Sum_probs=95.9
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.... ....
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~-----f~~~~~~~~~~----------------~~kp 161 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTR-----LTVIAGDDSVE----------------RGKP 161 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGT-----CSEEECTTTSS----------------SCTT
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhh-----eeeEEeCCCCC----------------CCCC
Confidence 35679999999999999999999999999999999999998643 12233333211 0112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc---cEecCCCchHHHHH-hcCeeeccCCchHHHHHHHHhH
Q 003371 744 SPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADV---GLSMGIQGTEVAKE-SSDIVILDDDFTSVATVLSPGD 816 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdV---Giamg~~gt~vAk~-aaDivlldd~f~sIv~~i~~gR 816 (825)
.|+--..+.+.+.-..+.+.++||+.||..|++.|++ +++||.+..+..++ .+|+++. ++..+..+++.|+
T Consensus 162 ~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--~~~el~~~l~~~~ 236 (237)
T 4ex6_A 162 HPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVD--SFPAAVTAVLDGH 236 (237)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEES--SHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEEC--CHHHHHHHHHccC
Confidence 2333344455554445668999999999999999999 99999544354454 7999985 8999999988765
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.55 E-value=2e-07 Score=98.76 Aligned_cols=67 Identities=18% Similarity=0.187 Sum_probs=58.6
Q ss_pred HHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHH
Q 003371 747 DKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSP 814 (825)
Q Consensus 747 dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~ 814 (825)
+|...++.|.+. | +-|+++||+.||.+|++.|++|+||| ++.+..|+.||.|..+++=..|.++|+.
T Consensus 211 ~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~s~~edGv~~~l~~ 281 (283)
T 3dao_A 211 SKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVS-NARQEVIAAAKHTCAPYWENGVLSVLKS 281 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHHSSEEECCGGGTHHHHHHHH
T ss_pred cHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcC-CCCHHHHHhcCeECCCCCCChHHHHHHH
Confidence 588888777654 3 45899999999999999999999999 8999999999999998888889988863
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.55 E-value=2.3e-07 Score=97.36 Aligned_cols=67 Identities=19% Similarity=0.212 Sum_probs=58.1
Q ss_pred HHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHH
Q 003371 747 DKLLMVQCLKKK----GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSP 814 (825)
Q Consensus 747 dK~~lV~~Lq~~----g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~ 814 (825)
.|...++.+.++ .+-++++||+.||.+|++.|++|+||| ++.+..|+.||.|..+.+=..|.+++++
T Consensus 200 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 200 HKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMK-NSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp SHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEET-TSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEec-CccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 577777766554 356899999999999999999999999 8999999999999998888899998864
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.53 E-value=3.1e-07 Score=98.46 Aligned_cols=68 Identities=25% Similarity=0.294 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHH
Q 003371 746 FDKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSP 814 (825)
Q Consensus 746 ~dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~ 814 (825)
..|..-++.|.++ | +-|+++||+.||.+|++.|++|+||| ++.+..|+.||.|..+++=..|.++|++
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~~ 298 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMA-NAPKNVKAAANYQAKSNDESGVLDVIDN 298 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcC-CcCHHHHHhccEEcCCCCcchHHHHHHH
Confidence 4688777777654 3 45899999999999999999999999 8999999999999998888889988863
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.53 E-value=2.2e-07 Score=97.36 Aligned_cols=68 Identities=26% Similarity=0.364 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHH
Q 003371 746 FDKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSP 814 (825)
Q Consensus 746 ~dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~ 814 (825)
..|..-++.+.++ | +-|+++||+.||.+|++.|++|+||| ++.+.+|++||.|..+++=..|.++++.
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMG-NASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeC-CCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 3677777776654 2 45889999999999999999999999 8999999999999999999999998853
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.48 E-value=6.5e-07 Score=89.53 Aligned_cols=129 Identities=15% Similarity=0.086 Sum_probs=95.9
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+..... ..++.+.+.. ....-.-.
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~----~~~~~~~~~~-------------~~~~~~p~ 130 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLC----HKLEIDDSDR-------------VVGYQLRQ 130 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEE----EEEEECTTSC-------------EEEEECCS
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceec----ceeEEcCCce-------------EEeeecCC
Confidence 5789999999999999 9999999999999999999999864210 1111111110 00001257
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
|..|...++.+......+.|+||+.||.+|++.|+++++++ ...+..+.+.+++ .-+++..+..+++
T Consensus 131 p~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~-~~~~~~~l~~~l~ 197 (206)
T 1rku_A 131 KDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFP-AVHTYEDLKREFL 197 (206)
T ss_dssp SSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSC-EECSHHHHHHHHH
T ss_pred CchHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEEC-CcHHHHHHHhhhc-cccchHHHHHHHH
Confidence 88999999999888889999999999999999999999986 4444433344543 3457888888774
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.46 E-value=7.5e-07 Score=94.38 Aligned_cols=67 Identities=24% Similarity=0.289 Sum_probs=57.7
Q ss_pred HHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHH
Q 003371 747 DKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSP 814 (825)
Q Consensus 747 dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~ 814 (825)
+|...++.+.+. | +.++++||+.||.+|++.|++|++|| ++.+..|+.||.++.+.+-..|.++++.
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~a~~v~~~~~~dGV~~~l~~ 268 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIEK 268 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEec-CCcHHHHhhCCEEecCCCcchHHHHHHH
Confidence 788888887654 2 45899999999999999999999999 7888899999999988888888888753
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.40 E-value=9e-07 Score=88.49 Aligned_cols=131 Identities=16% Similarity=0.116 Sum_probs=89.7
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechh-hhcCCHHHHHhhccCeeEEEec
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVE-FRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~-~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
.++|++.+.++.|++.|+++.++|+.....+..+.+.+|+...... ....+..... +.. ......
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-------------~~~~~~ 147 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIF-AVETIWNSDGSFKE-------------LDNSNG 147 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEE-EEEEEECTTSBEEE-------------EECTTS
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEE-EeeeeecCCCceec-------------cCCCCC
Confidence 3789999999999999999999999999999999999998531100 0001110000 000 011123
Q ss_pred CHHHHHHHHHHH-HhCCCEEEEEcCCccCHHHhhh----CCccEecCCCchHHHHHhcCeeeccCCchHHHHHH
Q 003371 744 SPFDKLLMVQCL-KKKGHVVAVTGDGTNDAPALKE----ADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVL 812 (825)
Q Consensus 744 sP~dK~~lV~~L-q~~g~vVa~~GDG~NDapALk~----AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i 812 (825)
+|..|...+..+ .-..+.+.|+||+.||.+|++. +.||++|+ +..+..+..||+++. ++..+..++
T Consensus 148 ~~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~-~~~~~~~~~ad~v~~--~~~el~~~l 218 (219)
T 3kd3_A 148 ACDSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEH-IEREKVINLSKYVAR--NVAELASLI 218 (219)
T ss_dssp TTTCHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSS-CCCHHHHHHCSEEES--SHHHHHHHH
T ss_pred CcccHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCc-cccHHHHhhcceeeC--CHHHHHHhh
Confidence 455666666554 3346789999999999999976 45556666 466778889999985 777776654
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=2.6e-07 Score=92.40 Aligned_cols=130 Identities=15% Similarity=0.132 Sum_probs=94.0
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+..... ...++.+.. . ...-.
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~---~~~i~~~~~-~----------------~~kp~ 129 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFA---EADVLGRDE-A----------------PPKPH 129 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSC---GGGEECTTT-S----------------CCTTS
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcC---cceEEeCCC-C----------------CCCCC
Confidence 456899999999999999999999999999999999999864210 012222211 0 01112
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc-cEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADV-GLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQ 817 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdV-Giamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~ 817 (825)
|.--..+.+.+.-..+.+.++||+.||..|.+.|++ +|+|+ +|.+..++.||+++. ++..+...++-.|+
T Consensus 130 ~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~~ad~v~~--~~~el~~~~~~~~~ 200 (205)
T 3m9l_A 130 PGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVN-LPDNPWPELTDWHAR--DCAQLRDLLSAEGH 200 (205)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECS-SSSCSCGGGCSEECS--SHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEe-CCCCcccccCCEEeC--CHHHHHHHHHhccc
Confidence 222223333332223568999999999999999999 99999 666667788999985 89999998877664
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=2e-06 Score=82.37 Aligned_cols=143 Identities=15% Similarity=0.243 Sum_probs=87.3
Q ss_pred CcCccccCceEEEEEEeccccccccccccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHc-
Q 003371 458 KTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEM- 536 (825)
Q Consensus 458 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~- 536 (825)
..||+|.|.++|+.+...+. + + ..+++..+.++. ..+.||..+||++++. +.
T Consensus 13 ~~~tit~gnr~vt~v~~~~g-~--------~--e~elL~lAAs~E---------------~~SeHPla~AIv~~A~-~~~ 65 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQG-V--------D--EKTLADAAQLAS---------------LADETPEGRSIVILAK-QRF 65 (156)
T ss_dssp --------CEEEEEEEECTT-S--------C--HHHHHHHHHHTT---------------SSCCSHHHHHHHHHHH-HHT
T ss_pred CCCceecCCCeEEEEEecCC-C--------C--HHHHHHHHHHHh---------------CcCCCHHHHHHHHHHH-Hhc
Confidence 47999999999999875432 1 1 122333222211 1256999999999998 44
Q ss_pred CCchHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHH
Q 003371 537 GMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHG 616 (825)
Q Consensus 537 g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~ 616 (825)
+......... .....+|++..++.+|.+ +|. .+.+|+++.|...+.. .|. .+. ..+.+.+++
T Consensus 66 ~l~~~~~~~~--~~~~~~F~a~~G~~Gv~v---~G~---~v~vGn~~~i~~l~~~----~gi--~~~----~~~~~~~~~ 127 (156)
T 1svj_A 66 NLRERDVQSL--HATFVPFTAQSRMSGINI---DNR---MIRKGSVDAIRRHVEA----NGG--HFP----TDVDQKVDQ 127 (156)
T ss_dssp TCCCCCHHHH--TCEEEEEETTTTEEEEEE---TTE---EEEEEEHHHHHHHHHH----HTC--CCC----HHHHHHHHH
T ss_pred CCCccccccc--ccceeeccccCCCCeEEE---CCE---EEEEeCcHHHHHHHHH----cCC--CCc----HHHHHHHHH
Confidence 5443211000 123578999998888844 443 3567998877766542 111 111 236777889
Q ss_pred HhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcc
Q 003371 617 MAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRP 668 (825)
Q Consensus 617 ~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~ 668 (825)
++.+|.+++.+|. |..++|++++.|++||
T Consensus 128 la~~G~T~v~VA~-----------------------d~~l~GvIalaD~iK~ 156 (156)
T 1svj_A 128 VARQGATPLVVVE-----------------------GSRVLGVIALKDIVKG 156 (156)
T ss_dssp HHHTTCEEEEEEE-----------------------TTEEEEEEEEEECCCC
T ss_pred HHhCCCCEEEEEE-----------------------CCEEEEEEEEecCCCC
Confidence 9999999999996 3469999999999997
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.32 E-value=2.8e-06 Score=86.47 Aligned_cols=112 Identities=18% Similarity=0.168 Sum_probs=78.3
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEE-Eec
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVM-ARS 743 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~-ar~ 743 (825)
+++||+.+.++.|++.|+++.++||.....+..+++.+|+..-.. .........+. -.+. ...
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~-------------g~~~~~~~ 155 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIA---TDPEYRDGRYT-------------GRIEGTPS 155 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEE---CEEEEETTEEE-------------EEEESSCS
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEE---cceEEECCEEe-------------eeecCCCC
Confidence 579999999999999999999999999999999999999853100 00000000000 0001 112
Q ss_pred CHHHHHHHHHHHH-hCC------CEEEEEcCCccCHHHhhhCCccEecCCCchHHHH
Q 003371 744 SPFDKLLMVQCLK-KKG------HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAK 793 (825)
Q Consensus 744 sP~dK~~lV~~Lq-~~g------~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk 793 (825)
.+..|...++.+. +.| +.+.|+||+.||.+|++.|++++++. ...++.+
T Consensus 156 ~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~-~~~~l~~ 211 (232)
T 3fvv_A 156 FREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN-PSPGLRE 211 (232)
T ss_dssp STHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES-CCHHHHH
T ss_pred cchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC-cCHHHHH
Confidence 2467777665544 345 57999999999999999999999996 4444433
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.30 E-value=1.1e-06 Score=88.85 Aligned_cols=128 Identities=11% Similarity=0.127 Sum_probs=91.0
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+..... ...
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~~----------------~kp 143 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYF-----DAIVGSSLDGK----------------LST 143 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGC-----SEEEEECTTSS----------------SCS
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhe-----eeeeccCCCCC----------------CCC
Confidence 357899999999999999999999999999999999999986431 12222222110 001
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc---cEecCCCchHH-HHHhcCeeeccCCchHHHHHHHH
Q 003371 744 SPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADV---GLSMGIQGTEV-AKESSDIVILDDDFTSVATVLSP 814 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdV---Giamg~~gt~v-Ak~aaDivlldd~f~sIv~~i~~ 814 (825)
.|.--..+.+.+.-..+.+.++||+.||..|++.|++ +++||....+. .+..||+++. ++..+..++..
T Consensus 144 ~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--s~~el~~~~~~ 216 (226)
T 3mc1_A 144 KEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVN--SVDELHKKILE 216 (226)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEES--SHHHHHHHHHT
T ss_pred CHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEEC--CHHHHHHHHHH
Confidence 1222223333333233578999999999999999999 99998433333 3688999986 78888887754
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.27 E-value=8.1e-06 Score=87.31 Aligned_cols=67 Identities=27% Similarity=0.325 Sum_probs=57.4
Q ss_pred HHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeec-cCCchHHHHHHHH
Q 003371 747 DKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVIL-DDDFTSVATVLSP 814 (825)
Q Consensus 747 dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivll-dd~f~sIv~~i~~ 814 (825)
+|...++.|.+. | ..|+++||+.||.+|++.|++|++|| ++.+..|+.||+++. +.+-..|..+++.
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~~dGVa~~l~~ 295 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLKK 295 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHH
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEc-CCcHHHHhhCCEEEccCCCCcHHHHHHHH
Confidence 687777777654 2 35889999999999999999999999 788888999999998 8888889888863
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.23 E-value=1.1e-06 Score=90.70 Aligned_cols=139 Identities=9% Similarity=0.156 Sum_probs=92.4
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc-CCccccccccccee---------------------------
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATEC-GILRLDQQVEKGEV--------------------------- 716 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~-GI~~~~~~~~~~~v--------------------------- 716 (825)
.+-+.++++|++|+++| .|.++||.....+..+.+++ +++.. ++..+
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l~~~I~~----nGa~i~~~~~~~~~~~~~~~~~l~~~~~~~i~ 97 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLDINMICY----HGACSKINGQIVYNNGSDRFLGVFDRIYEDTR 97 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSSCEEEEG----GGTEEEETTEEEECTTGGGGHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccchheEEE----CCEEEeeCCeeeecccccccchhhHHHHHHHH
Confidence 46789999999999999 99999999999999887765 11111 11111
Q ss_pred ----------eechh------hhcC---CHH---HHHhhc---cCeeEE-----EecCHH--HHHHHHHHHHhCCCEEEE
Q 003371 717 ----------VEGVE------FRNY---TDE---ERIQKV---DKIRVM-----ARSSPF--DKLLMVQCLKKKGHVVAV 764 (825)
Q Consensus 717 ----------i~G~~------~~~~---~~~---~~~~~~---~~~~V~-----ar~sP~--dK~~lV~~Lq~~g~vVa~ 764 (825)
+++.+ ++.. .++ ++.+.+ +.+.+. -...|. +|..-++.|.+.-. |++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~g-via 176 (239)
T 1u02_A 98 SWVSDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVRGERP-AII 176 (239)
T ss_dssp THHHHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHHHTCEEEECSSEEEEECTTCCHHHHHHHHHTTSC-EEE
T ss_pred HHHhhCCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhccCCcEEEeCCcEEEEEcCCCCHHHHHHHHHhhCC-eEE
Confidence 11110 0000 111 111111 222221 123333 78888888887633 889
Q ss_pred EcCCccCHHHhhhC--CccEecCCCchHHHHHhcCeeecc-CCchHHHHHHHH
Q 003371 765 TGDGTNDAPALKEA--DVGLSMGIQGTEVAKESSDIVILD-DDFTSVATVLSP 814 (825)
Q Consensus 765 ~GDG~NDapALk~A--dVGiamg~~gt~vAk~aaDivlld-d~f~sIv~~i~~ 814 (825)
+||+.||.+||+.| ++||||| ++ ++.||.++.+ ++-..|..+++.
T Consensus 177 ~GD~~ND~~Ml~~a~~g~~vam~-Na----~~~A~~v~~~~~~~~gV~~~l~~ 224 (239)
T 1u02_A 177 AGDDATDEAAFEANDDALTIKVG-EG----ETHAKFHVADYIEMRKILKFIEM 224 (239)
T ss_dssp EESSHHHHHHHHTTTTSEEEEES-SS----CCCCSEEESSHHHHHHHHHHHHH
T ss_pred EeCCCccHHHHHHhhCCcEEEEC-CC----CCcceEEeCCCCCHHHHHHHHHH
Confidence 99999999999999 9999999 55 6789999887 667778777753
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.21 E-value=1.8e-06 Score=87.37 Aligned_cols=129 Identities=16% Similarity=0.042 Sum_probs=91.3
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
-++.|++.+.++.|++.|+++.++|+.....+..+.+..|+.... ..++.+.+... ...
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~~----------------~kp 148 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINK-----INIVTRDDVSY----------------GKP 148 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTS-----SCEECGGGSSC----------------CTT
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhh-----heeeccccCCC----------------CCC
Confidence 346799999999999999999999999999999999999986531 22333332210 111
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc---cEecCCCchHHHHHh-cCeeeccCCchHHHHHHHHh
Q 003371 744 SPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADV---GLSMGIQGTEVAKES-SDIVILDDDFTSVATVLSPG 815 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdV---Giamg~~gt~vAk~a-aDivlldd~f~sIv~~i~~g 815 (825)
.|.--..+.+.+.-..+.++++||+.||..|++.|++ ++++|.+..+..++. +|+++- ++..+...++..
T Consensus 149 ~~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~--~~~el~~~l~~~ 222 (233)
T 3s6j_A 149 DPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYE--DPLDLLNHLDEI 222 (233)
T ss_dssp STHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEES--SHHHHHHTGGGT
T ss_pred ChHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEEC--CHHHHHHHHHHH
Confidence 1222222333332223568999999999999999999 888885555555554 999885 788888887554
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.21 E-value=1.9e-06 Score=87.39 Aligned_cols=130 Identities=21% Similarity=0.236 Sum_probs=87.3
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
-+++||+.++++.|+++|+++.++|+.....+..+.+.+|+..... ...++. |. ..-.+.+.-
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~---f~~~~~---~~-----------~~~~~~~~~ 147 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNV---FANRLK---FY-----------FNGEYAGFD 147 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGE---EEECEE---EC-----------TTSCEEEEC
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccE---EeeeEE---Ec-----------CCCcEecCC
Confidence 3688999999999999999999999999999999999999863100 000000 00 000011111
Q ss_pred ------CHHHHHHHHHHHHhC-C-CEEEEEcCCccCHHHhhhCCccEecCCCc-hHHHHHhcCeeeccCCchHHHHHH
Q 003371 744 ------SPFDKLLMVQCLKKK-G-HVVAVTGDGTNDAPALKEADVGLSMGIQG-TEVAKESSDIVILDDDFTSVATVL 812 (825)
Q Consensus 744 ------sP~dK~~lV~~Lq~~-g-~vVa~~GDG~NDapALk~AdVGiamg~~g-t~vAk~aaDivlldd~f~sIv~~i 812 (825)
.+..|-.+++.+.++ | +.+.|+||+.||.+|.+.|+++|++|... .+.....+|.++. ++..+...+
T Consensus 148 ~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 223 (225)
T 1nnl_A 148 ETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVELLGEL 223 (225)
T ss_dssp TTSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGGGCC--
T ss_pred CCCcccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeec--CHHHHHHHH
Confidence 123566666555443 4 56889999999999999999988887432 2445567899885 676665444
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.20 E-value=1.7e-06 Score=95.70 Aligned_cols=111 Identities=18% Similarity=0.212 Sum_probs=74.8
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEe-
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMAR- 742 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar- 742 (825)
..++|++++.|+.||++|++|+||||.....++.+|+++|+.-... ...|+ |..+.... .-.+-.+
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip---~~~Vi-g~~l~~~~---------dG~~tg~~ 286 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMK---EEKVL-GLRLMKDD---------EGKILPKF 286 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCC---GGGEE-EECEEECT---------TCCEEEEE
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCC---cceEE-EeEEEEec---------CCceeeee
Confidence 3478999999999999999999999999999999999998732100 00011 11111000 0001111
Q ss_pred ------cCHHHHHHHHHHHHhC--C-CEEEEEcCCccCHHHhhh-CCccEecCCC
Q 003371 743 ------SSPFDKLLMVQCLKKK--G-HVVAVTGDGTNDAPALKE-ADVGLSMGIQ 787 (825)
Q Consensus 743 ------~sP~dK~~lV~~Lq~~--g-~vVa~~GDG~NDapALk~-AdVGiamg~~ 787 (825)
+..+.|...|+.+-.. | ..|.++|||.||.|||++ +|.++++.++
T Consensus 287 ~~~~p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~liin 341 (385)
T 4gxt_A 287 DKDFPISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSLIIH 341 (385)
T ss_dssp CTTSCCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEEEEC
T ss_pred cCccceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEEEEc
Confidence 2456799988876432 1 246677999999999997 6777776554
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.19 E-value=1e-05 Score=84.81 Aligned_cols=66 Identities=33% Similarity=0.439 Sum_probs=56.6
Q ss_pred HHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 747 DKLLMVQCLKKK----GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 747 dK~~lV~~Lq~~----g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
+|...++.+.+. ...++++||+.||.+|++.|++|++|| ++.+..|+.||.++.+.+-..|.++++
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEec-CCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 687777777653 245889999999999999999999999 788888999999998888888988875
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.19 E-value=3.2e-06 Score=88.80 Aligned_cols=67 Identities=27% Similarity=0.321 Sum_probs=57.1
Q ss_pred HHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHH
Q 003371 747 DKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSP 814 (825)
Q Consensus 747 dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~ 814 (825)
.|...++.+.+. | +.++++||+.||.+|++.|++|++|| ++.+..|+.||.|+.+.+-..|.+++++
T Consensus 191 ~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~dGVa~~l~~ 261 (271)
T 1rlm_A 191 HKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQA 261 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeC-CccHHHHHhCCeeCcCCCCChHHHHHHH
Confidence 677777777654 3 45899999999999999999999999 7888889999999988777888888764
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=5.5e-06 Score=86.38 Aligned_cols=64 Identities=19% Similarity=0.226 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHhC-C-----CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 746 FDKLLMVQCLKKK-G-----HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 746 ~dK~~lV~~Lq~~-g-----~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
.+|...++.+.++ | ..++++||+.||.+|++.|++|++|| ++.+ . .++++..+++-..+.++++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~-~--~~~~~~~~~~~~gv~~~~~ 244 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVG-RGDP-P--EGVLATPAPGPEGFRYAVE 244 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECS-SSCC-C--TTCEECSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeC-Chhh-c--CCcEEeCCCCchHHHHHHH
Confidence 5788888887665 3 67999999999999999999999999 6777 4 6888888877777877765
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.15 E-value=1.1e-05 Score=85.63 Aligned_cols=67 Identities=31% Similarity=0.393 Sum_probs=55.5
Q ss_pred HHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHH
Q 003371 747 DKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSP 814 (825)
Q Consensus 747 dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~ 814 (825)
+|...++.+.+. | +.++++||+.||.+|++.|++|++|| ++.+..|+.||.++.+.+-..|.++++.
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-~~~~~~~~~a~~v~~~~~~dGVa~~i~~ 286 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMKH 286 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEc-CCCHHHHhhCceeecCCCcChHHHHHHH
Confidence 455556666543 2 45899999999999999999999999 7888889999999988888889888863
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.15 E-value=4.2e-06 Score=87.01 Aligned_cols=128 Identities=17% Similarity=0.193 Sum_probs=88.5
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.|++.+.++.|++.|+++.++|++....+..+.+.+|+.... ...++.+.... .....
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~----------------~~kp~ 162 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK----PDFLVTPDDVP----------------AGRPY 162 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC----CSCCBCGGGSS----------------CCTTS
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccC----hHheecCCccC----------------CCCCC
Confidence 46799999999999999999999999999888888888765321 01222222211 01123
Q ss_pred HHHHHHHHHHHHhCC-CEEEEEcCCccCHHHhhhCC---ccEecCCCc-----------------------hHHHHHh-c
Q 003371 745 PFDKLLMVQCLKKKG-HVVAVTGDGTNDAPALKEAD---VGLSMGIQG-----------------------TEVAKES-S 796 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g-~vVa~~GDG~NDapALk~Ad---VGiamg~~g-----------------------t~vAk~a-a 796 (825)
|.--..+.+.+.-.. +.++++||+.||..|++.|+ |++++|... .+..++. |
T Consensus 163 ~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 242 (267)
T 1swv_A 163 PWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGA 242 (267)
T ss_dssp SHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCC
Confidence 443344555554334 57899999999999999999 788888431 2334444 9
Q ss_pred CeeeccCCchHHHHHHHH
Q 003371 797 DIVILDDDFTSVATVLSP 814 (825)
Q Consensus 797 Divlldd~f~sIv~~i~~ 814 (825)
|+++- ++..+..++..
T Consensus 243 d~v~~--~~~el~~~l~~ 258 (267)
T 1swv_A 243 HFTIE--TMQELESVMEH 258 (267)
T ss_dssp SEEES--SGGGHHHHHHH
T ss_pred ceecc--CHHHHHHHHHH
Confidence 99984 78888877743
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.13 E-value=1.4e-05 Score=84.33 Aligned_cols=147 Identities=11% Similarity=0.027 Sum_probs=75.3
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcc-cccccccceee-ec--h---h---h-hcCCHHH-----
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILR-LDQQVEKGEVV-EG--V---E---F-RNYTDEE----- 729 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~-~~~~~~~~~vi-~G--~---~---~-~~~~~~~----- 729 (825)
+-+.++++|++|+++|+++.++||.....+..+.+++|+.. +-...+++.+. ++ + . + ..++.+.
T Consensus 27 ~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 106 (275)
T 1xvi_A 27 DWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLVL 106 (275)
T ss_dssp SCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTTCTTSTTTTEEECSSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEecCcccccCceEEEecCCCHHHHHHHH
Confidence 44678999999999999999999999999999999998743 11111222222 11 1 0 0 0111100
Q ss_pred --------------------------------------------------------HHhhcc--CeeEE-----EecCHH
Q 003371 730 --------------------------------------------------------RIQKVD--KIRVM-----ARSSPF 746 (825)
Q Consensus 730 --------------------------------------------------------~~~~~~--~~~V~-----ar~sP~ 746 (825)
+.+.+. .+.+. -...|.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~leI~~~ 186 (275)
T 1xvi_A 107 NTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWHVLDA 186 (275)
T ss_dssp HHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCHHHHHHHHHHHHHTTEEEEECSSCEEEEET
T ss_pred HHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHhhccCceeEecCCHHHHHHHHHHHHhhCeEEEECCceEEEecC
Confidence 000000 01111 011111
Q ss_pred --HHHHHHHHHHhC-C----CE--EEEEcCCccCHHHhhhCCccEecCCCch---HHHHHh--cC-eeeccCCchHHHHH
Q 003371 747 --DKLLMVQCLKKK-G----HV--VAVTGDGTNDAPALKEADVGLSMGIQGT---EVAKES--SD-IVILDDDFTSVATV 811 (825)
Q Consensus 747 --dK~~lV~~Lq~~-g----~v--Va~~GDG~NDapALk~AdVGiamg~~gt---~vAk~a--aD-ivlldd~f~sIv~~ 811 (825)
+|...++.|.+. | +. |+++||+.||.+|++.|++|++|| ++. +..|+. || +|..+++-..|.++
T Consensus 187 ~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~ 265 (275)
T 1xvi_A 187 SAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVK-GLNREGVHLHDEDPARVWRTQREGPEGWREG 265 (275)
T ss_dssp TCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECC-CCC----------------------------
T ss_pred CCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEec-CCCccchhhccccCCceeEccCCCchHHHHH
Confidence 465555555432 3 34 889999999999999999999999 676 445543 78 88877777778777
Q ss_pred HH
Q 003371 812 LS 813 (825)
Q Consensus 812 i~ 813 (825)
++
T Consensus 266 l~ 267 (275)
T 1xvi_A 266 LD 267 (275)
T ss_dssp --
T ss_pred HH
Confidence 65
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.09 E-value=5.1e-06 Score=83.35 Aligned_cols=122 Identities=15% Similarity=0.175 Sum_probs=84.6
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.... .....
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~----------------~~kp~ 152 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF-----DALASAEKLP----------------YSKPH 152 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC-----SEEEECTTSS----------------CCTTS
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhC-----cEEEeccccC----------------CCCCC
Confidence 45799999999999999999999999999889999999885421 1222222111 00112
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEec----CCCchHHHHHhcCeeeccCCchHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSM----GIQGTEVAKESSDIVILDDDFTSVAT 810 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiam----g~~gt~vAk~aaDivlldd~f~sIv~ 810 (825)
|.--..+.+.+.-..+.+.++||+.||.+|++.|+++++| + ++.+..+..||.++. ++..+..
T Consensus 153 ~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~~~~~~~a~~v~~--~~~el~~ 219 (226)
T 1te2_A 153 PQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPE-AQNDPRFVLANVKLS--SLTELTA 219 (226)
T ss_dssp THHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTT-TTTCGGGGGSSEECS--CGGGCCH
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCC-CcccccccccCeEEC--CHHHHhH
Confidence 3333344444443345688999999999999999999999 5 334445788999875 4544433
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.07 E-value=1.7e-06 Score=89.18 Aligned_cols=124 Identities=20% Similarity=0.292 Sum_probs=85.9
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.++... .-
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~-----f~~~~~~~~~~~~----------------Kp 171 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHL-----FSEMLGGQSLPEI----------------KP 171 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG-----CSEEECTTTSSSC----------------TT
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchhe-----EEEEEecccCCCC----------------Cc
Confidence 35779999999999999999999999999999999999998642 1233333322111 11
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEe---cCCC-chHHHHHhcCeeeccCCchHHHH
Q 003371 744 SPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLS---MGIQ-GTEVAKESSDIVILDDDFTSVAT 810 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGia---mg~~-gt~vAk~aaDivlldd~f~sIv~ 810 (825)
.|.--..+.+.+.-..+.++|+||+.||.+|++.|+++.. .|.. +.+..+..+|+++. ++..+..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~--~~~el~~ 240 (243)
T 2hsz_A 172 HPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADILK 240 (243)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGGG
T ss_pred CHHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEEC--CHHHHHH
Confidence 2333344445554344668999999999999999998743 2311 23445677999885 5665544
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.07 E-value=4.5e-06 Score=85.32 Aligned_cols=126 Identities=14% Similarity=0.107 Sum_probs=87.7
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+..... ...
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~~----------------~kp 167 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYF-----KYIAGSNLDGT----------------RVN 167 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC-----SEEEEECTTSC----------------CCC
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhE-----EEEEeccccCC----------------CCC
Confidence 356899999999999999999999999999999999999986531 12222221110 011
Q ss_pred CHHHHHHHHHHHHhC-CCEEEEEcCCccCHHHhhhCCc---cEecCCCchHH-HHHhcCeeeccCCchHHHHHH
Q 003371 744 SPFDKLLMVQCLKKK-GHVVAVTGDGTNDAPALKEADV---GLSMGIQGTEV-AKESSDIVILDDDFTSVATVL 812 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~-g~vVa~~GDG~NDapALk~AdV---Giamg~~gt~v-Ak~aaDivlldd~f~sIv~~i 812 (825)
.|.--..+.+.+.-. .+.+.++||+.||..|++.|++ ++++|....+. .+..+|.++. ++..+..++
T Consensus 168 ~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--~~~el~~~l 239 (240)
T 3sd7_A 168 KNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVE--NVESIKDIL 239 (240)
T ss_dssp HHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEES--SSTTHHHHH
T ss_pred CHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEEC--CHHHHHHHh
Confidence 122122333333333 4568999999999999999999 88888433333 3578999886 677777654
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.06 E-value=4.8e-06 Score=88.24 Aligned_cols=131 Identities=17% Similarity=0.141 Sum_probs=88.4
Q ss_pred CCcccHHHHHHHHHhC-CCeEEEEcCC---------------------CHHHHHHHHHHcCCcccccccccceeeechhh
Q 003371 665 PCRPGVQKAVEACQSA-GVEIKMITGD---------------------NVFTAKAIATECGILRLDQQVEKGEVVEGVEF 722 (825)
Q Consensus 665 plR~~v~~aI~~l~~a-GI~V~mvTGD---------------------~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~ 722 (825)
..++++.+.++.+++. |+++...|.. ....+..+.++.|+.... .....+
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~--------~~~~~~ 193 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNI--------NRCNPL 193 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEE--------EECCGG
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEE--------EEcccc
Confidence 4678999999999988 9998888876 334445555555553210 000000
Q ss_pred hcCCHHHHHhhccCeeEEEecCH--HHHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhc
Q 003371 723 RNYTDEERIQKVDKIRVMARSSP--FDKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESS 796 (825)
Q Consensus 723 ~~~~~~~~~~~~~~~~V~ar~sP--~dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aa 796 (825)
..- +.-..+....| ..|...++.+.++ | +.++++||+.||.+|++.|++|++|| ++.+..++.|
T Consensus 194 ~~~---------~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~-~~~~~~~~~a 263 (289)
T 3gyg_A 194 AGD---------PEDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLK-NATQEAKNLH 263 (289)
T ss_dssp GTC---------CTTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TCCHHHHHHC
T ss_pred ccC---------CCCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEEC-CccHHHHHhC
Confidence 000 00001222222 3566666666543 3 45899999999999999999999999 7888899999
Q ss_pred CeeeccCCchHHHHHHH
Q 003371 797 DIVILDDDFTSVATVLS 813 (825)
Q Consensus 797 Divlldd~f~sIv~~i~ 813 (825)
|+++.+.+-..+..+++
T Consensus 264 ~~v~~~~~~~gv~~~~~ 280 (289)
T 3gyg_A 264 NLITDSEYSKGITNTLK 280 (289)
T ss_dssp CCBCSSCHHHHHHHHHH
T ss_pred CEEcCCCCcCHHHHHHH
Confidence 99998887788888886
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.02 E-value=4e-06 Score=85.00 Aligned_cols=129 Identities=17% Similarity=0.167 Sum_probs=90.0
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
-++.|++.++++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.+.. ...-
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~-----f~~i~~~~~~~----------------~~Kp 140 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGY-----FDLIVGGDTFG----------------EKKP 140 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG-----CSEEECTTSSC----------------TTCC
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHH-----heEEEecCcCC----------------CCCC
Confidence 35689999999999999999999999999999999999998542 12233222211 0112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc-Eec--CCCchHHHHHhcCeeeccCCchHHHHHHHHhHH
Q 003371 744 SPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVG-LSM--GIQGTEVAKESSDIVILDDDFTSVATVLSPGDQ 817 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVG-iam--g~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~ 817 (825)
.|+--..+.+.+.-....++++||+.||.+|.+.|++. +++ |....+. ..+|.++- ++..+..++.....
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~--~~~~~~~~--~~~el~~~l~~~~~ 213 (222)
T 2nyv_A 141 SPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS--QIPDFTLS--RPSDLVKLMDNHIV 213 (222)
T ss_dssp TTHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC--CCCSEEES--STTHHHHHHHTTSS
T ss_pred ChHHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc--cCCCEEEC--CHHHHHHHHHHhhh
Confidence 34444455555544456688999999999999999977 444 4222222 56888875 78999888765443
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.01 E-value=3.7e-06 Score=84.33 Aligned_cols=113 Identities=10% Similarity=0.085 Sum_probs=77.7
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.|++.+.++.|++.|+++.++|++ ..+..+.+.+|+... ...++.+.+... ....
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~-----f~~~~~~~~~~~----------------~Kp~ 147 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGY-----FDAIADPAEVAA----------------SKPA 147 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGG-----CSEECCTTTSSS----------------CTTS
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHH-----cceEeccccCCC----------------CCCC
Confidence 46799999999999999999999998 445677788887542 122233222110 0112
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeecc
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILD 802 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlld 802 (825)
|+--..+.+.+.-..+.+.++||+.||.+|++.|+++++|+ ++.+..+ .||.++.+
T Consensus 148 ~~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~-~~~~~~~-~a~~v~~~ 203 (221)
T 2wf7_A 148 PDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGV-GRPEDLG-DDIVIVPD 203 (221)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEE-SCHHHHC-SSSEEESS
T ss_pred hHHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEE-CCHHHhc-cccchhcC
Confidence 22223333433323456889999999999999999999998 6666666 89998853
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=97.99 E-value=3.9e-06 Score=84.20 Aligned_cols=123 Identities=18% Similarity=0.168 Sum_probs=79.7
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCH
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSP 745 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP 745 (825)
+.|++.+.++.|++.|+++.++|+........+.+.+|+... ...++.+..... ....|
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~----------------~k~~~ 148 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDW-----FDIIIGGEDVTH----------------HKPDP 148 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTC-----CSEEECGGGCSS----------------CTTST
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhh-----eeeeeehhhcCC----------------CCCCh
Confidence 468999999999999999999999999999999998887542 112222221110 00112
Q ss_pred HHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEec----CCCchHHHHHh-cCeeeccCCchHHHHHH
Q 003371 746 FDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSM----GIQGTEVAKES-SDIVILDDDFTSVATVL 812 (825)
Q Consensus 746 ~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiam----g~~gt~vAk~a-aDivlldd~f~sIv~~i 812 (825)
.--..+.+.+.-..+.+.++||+.||.+|++.|+++++| + +..+..++. ||.++. ++..+...+
T Consensus 149 ~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~-~~~~~l~~~~ad~v~~--~~~el~~~l 217 (225)
T 3d6j_A 149 EGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGM-TTAQEFQAYPYDRIIS--TLGQLISVP 217 (225)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSS-CCTTGGGGSCCSEEES--SGGGGC---
T ss_pred HHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCC-CChHHHhhcCCCEEEC--CHHHHHHhh
Confidence 222233333332234588999999999999999998887 4 233333444 898885 555555555
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=97.98 E-value=2.2e-05 Score=79.34 Aligned_cols=124 Identities=19% Similarity=0.189 Sum_probs=90.4
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+... ...++.+.+... ..-.
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~-----f~~~~~~~~~~~----------------~kp~ 157 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDL-----FDSITTSEEAGF----------------FKPH 157 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGG-----CSEEEEHHHHTB----------------CTTS
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHH-----cceeEeccccCC----------------CCcC
Confidence 5679999999999999 99999999999999999999998643 122333322211 1112
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCc-cCHHHhhhCC---ccEecCCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGT-NDAPALKEAD---VGLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~-NDapALk~Ad---VGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
|.--..+.+.+.-..+.+.++||+. ||..|.+.|+ +++++| ++.+..++.+|+++. ++..+..+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~a~~~~~--~~~el~~~l~ 227 (234)
T 3u26_A 158 PRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRK-GEKREFWDKCDFIVS--DLREVIKIVD 227 (234)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSS-STTGGGGGGCSEEES--STHHHHHHHH
T ss_pred HHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCC-CCccccccCCCEeeC--CHHHHHHHHH
Confidence 3222334444433346689999997 9999999999 788888 566666678999986 7888888775
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=97.98 E-value=5.6e-06 Score=85.90 Aligned_cols=55 Identities=24% Similarity=0.176 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHhC-----CCEEEEEcCCccCHHHhhhCCccEecCCCch-HHHHHhcCeeec
Q 003371 746 FDKLLMVQCLKKK-----GHVVAVTGDGTNDAPALKEADVGLSMGIQGT-EVAKESSDIVIL 801 (825)
Q Consensus 746 ~dK~~lV~~Lq~~-----g~vVa~~GDG~NDapALk~AdVGiamg~~gt-~vAk~aaDivll 801 (825)
.+|..-++.|.+. ..-|+++||+.||.+||+.|++|+||| ++. +..|+.||+|+.
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~g-na~~~~~~~~a~~v~~ 238 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVG-SLKHKKAQNVSSIIDV 238 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEES-SCCCTTEEEESSHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeC-CCCccccchhceEEec
Confidence 3588877777654 357899999999999999999999999 676 656777887754
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.97 E-value=7.1e-06 Score=82.84 Aligned_cols=126 Identities=13% Similarity=0.080 Sum_probs=88.7
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+... ..-
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~~----------------~kp 153 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSF-----DHLISVDEVRL----------------FKP 153 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGC-----SEEEEGGGTTC----------------CTT
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhc-----ceeEehhhccc----------------CCC
Confidence 467899999999999999999999999999999999999986531 22333332211 111
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCC---CchHHHHHhcCeeeccCCchHHHHHH
Q 003371 744 SPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGI---QGTEVAKESSDIVILDDDFTSVATVL 812 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~---~gt~vAk~aaDivlldd~f~sIv~~i 812 (825)
.|.--..+.+.+.-..+.+.++||+.||..|.+.|+++++|-. +..+..+..+|+++- ++..+..++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 223 (230)
T 3um9_A 154 HQKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVS--DVGVLASRF 223 (230)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEES--SHHHHHHTC
T ss_pred ChHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeC--CHHHHHHHH
Confidence 2222233444443334568899999999999999999999922 333444567898886 677776654
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.97 E-value=7.6e-06 Score=80.60 Aligned_cols=119 Identities=13% Similarity=0.157 Sum_probs=83.1
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.|++.+.++.|++.|+++.++|+....... +.+.+|+... ...++.+.+... ....
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~-----f~~~~~~~~~~~----------------~Kp~ 142 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESY-----FTEILTSQSGFV----------------RKPS 142 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGG-----EEEEECGGGCCC----------------CTTS
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhh-----eeeEEecCcCCC----------------CCCC
Confidence 45799999999999999999999999988888 8888887542 112222222110 0111
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc-EecCCCchHHHHHhcCeeeccCCchHHHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVG-LSMGIQGTEVAKESSDIVILDDDFTSVATVL 812 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVG-iamg~~gt~vAk~aaDivlldd~f~sIv~~i 812 (825)
|+--..+.+.+.-..+.++++||+.||.+|++.|+++ ++|+ +|.+ .+|.++. ++..+..++
T Consensus 143 ~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~-~~~~----~a~~v~~--~~~el~~~l 204 (207)
T 2go7_A 143 PEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFL-ESTY----EGNHRIQ--ALADISRIF 204 (207)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESS-CCSC----TTEEECS--STTHHHHHT
T ss_pred cHHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEe-cCCC----CCCEEeC--CHHHHHHHH
Confidence 3333344455543445688999999999999999997 8888 5552 6888874 677776654
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.96 E-value=1.5e-05 Score=80.76 Aligned_cols=113 Identities=15% Similarity=0.125 Sum_probs=73.4
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.|++.+.++.|++.|+++.++|+... +..+.+.+|+.... ..++.+.+.. ...-.
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f-----~~i~~~~~~~----------------~~Kp~ 148 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDF-----HAIVDPTTLA----------------KGKPD 148 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTC-----SEECCC-------------------------
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhc-----CEEeeHhhCC----------------CCCCC
Confidence 4689999999999999999999999754 77888899986431 2222222111 11111
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeecc
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILD 802 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlld 802 (825)
|+-=..+.+.+.-..+.+.|+||+.||..|.+.|+++++|. ++.+..+ .||+++.+
T Consensus 149 ~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~-~ad~v~~s 204 (233)
T 3nas_A 149 PDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGV-GQGQPML-GADLVVRQ 204 (233)
T ss_dssp CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEEC-C--------CSEECSS
T ss_pred hHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEE-CCccccc-cCCEEeCC
Confidence 22223344444433466889999999999999999999998 4555455 89998863
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.95 E-value=6.2e-06 Score=83.57 Aligned_cols=128 Identities=11% Similarity=0.070 Sum_probs=92.2
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+... ..-
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~~----------------~kp 156 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLF-----DHVLSVDAVRL----------------YKT 156 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTC-----SEEEEGGGTTC----------------CTT
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhc-----CEEEEecccCC----------------CCc
Confidence 356799999999999999999999999999999999999986531 22333332211 111
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEec----CCCchHHHHHhcCeeeccCCchHHHHHHHHh
Q 003371 744 SPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSM----GIQGTEVAKESSDIVILDDDFTSVATVLSPG 815 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiam----g~~gt~vAk~aaDivlldd~f~sIv~~i~~g 815 (825)
.|.--..+.+.+.-..+.+.++||+.||..|.+.|+++.+| + +..+..+..+|.++- ++..+..++...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~-~~~~~~~~~~~~v~~--~~~el~~~l~~~ 229 (233)
T 3umb_A 157 APAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLG-HPPEALDVAPAAAGH--DMRDLLQFVQAR 229 (233)
T ss_dssp SHHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTC-CCCCSSSCCCSEEES--SHHHHHHHHHC-
T ss_pred CHHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCC-CCchhccCCCCEEEC--CHHHHHHHHHHh
Confidence 23223334444433345688999999999999999999999 5 444444667999986 899998887653
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.94 E-value=1.3e-05 Score=82.09 Aligned_cols=141 Identities=13% Similarity=0.136 Sum_probs=92.0
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHh--hccCeeEEE
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQ--KVDKIRVMA 741 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~--~~~~~~V~a 741 (825)
-+++||+.++++.|+++|+++.++|+.....+..+.+ |+... . .++.+.....- ..+.. .-|.-..+.
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~-----~v~~~~~~~~~--~~~~~~~~kp~p~~~~ 145 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-D-----RIYCNHASFDN--DYIHIDWPHSCKGTCS 145 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-G-----GEEEEEEECSS--SBCEEECTTCCCTTCC
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-C-----eEEeeeeEEcC--CceEEecCCCCccccc
Confidence 4678999999999999999999999999998888888 76432 1 12222211000 00000 000001011
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHh--cCeeeccCCchHHHHHHHHhHH
Q 003371 742 RSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKES--SDIVILDDDFTSVATVLSPGDQ 817 (825)
Q Consensus 742 r~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~a--aDivlldd~f~sIv~~i~~gR~ 817 (825)
+....+|..+++.+.-..+.+.|+||+.||.+|.+.|++.++.+ ...+..++. +|+++ ++|..+...+.....
T Consensus 146 ~~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~~--~~~~el~~~l~~~~~ 220 (236)
T 2fea_A 146 NQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLPY--QDFYEIRKEIENVKE 220 (236)
T ss_dssp SCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEECC--SSHHHHHHHHHTSHH
T ss_pred cccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeech-HHHHHHHHCCCCeeec--CCHHHHHHHHHHhHH
Confidence 11245788888888766788999999999999999999988753 112223333 66666 489999888765433
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.93 E-value=2.1e-05 Score=79.62 Aligned_cols=122 Identities=16% Similarity=0.151 Sum_probs=80.6
Q ss_pred CCcccHHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 665 PCRPGVQKAVEACQSA-GVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 665 plR~~v~~aI~~l~~a-GI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
++.|++.+.++.|++. |+++.++|+.....+..+.+.+|+.... ..++.+.+.. .
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~-----------------~-- 148 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF-----PFGAFADDAL-----------------D-- 148 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC-----SCEECTTTCS-----------------S--
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhc-----CcceecCCCc-----------------C--
Confidence 3579999999999999 9999999999999999999999986431 1122222111 0
Q ss_pred CHHHHHHH-HHHHHhCC-----CEEEEEcCCccCHHHhhhCC---ccEecCCCchHHHHH-hcCeeeccCCchHHHHHH
Q 003371 744 SPFDKLLM-VQCLKKKG-----HVVAVTGDGTNDAPALKEAD---VGLSMGIQGTEVAKE-SSDIVILDDDFTSVATVL 812 (825)
Q Consensus 744 sP~dK~~l-V~~Lq~~g-----~vVa~~GDG~NDapALk~Ad---VGiamg~~gt~vAk~-aaDivlldd~f~sIv~~i 812 (825)
.|.-+..+ -+.+++.| +.+.++||+.||.+|++.|+ |++++|....+..+. .+|.++. ++..+...+
T Consensus 149 ~~k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~--~~~el~~~l 225 (234)
T 2hcf_A 149 RNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAETDEVL 225 (234)
T ss_dssp GGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCCHHHHH
T ss_pred ccchHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeC--CHHhHHHHH
Confidence 11111222 22233333 56889999999999999999 677776333333332 2898875 455555544
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=97.93 E-value=5e-06 Score=82.51 Aligned_cols=122 Identities=18% Similarity=0.165 Sum_probs=86.0
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.+... ....
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~-----f~~~~~~~~~~~----------------~kp~ 147 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGF-----FDIVLSGEEFKE----------------SKPN 147 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG-----CSEEEEGGGCSS----------------CTTS
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhh-----eeeEeecccccC----------------CCCC
Confidence 4679999999999999999999999999999999999998653 123333332211 1112
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCc-hHHHHHhcCeeeccCCchHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQG-TEVAKESSDIVILDDDFTSVA 809 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~g-t~vAk~aaDivlldd~f~sIv 809 (825)
|+--..+.+.+.-..+.+.++||+.||..|.+.|+++..|...+ ....+..+|.++- ++..+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~--~~~el~ 211 (214)
T 3e58_A 148 PEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLD--SLTDVL 211 (214)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEES--SGGGGG
T ss_pred hHHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHH--HHHHHH
Confidence 33333444444433456899999999999999999988886443 3333467888875 555443
|
| >4aqr_D Calcium-transporting ATPase 8, plasma membrane-TY; Ca-binding protein-hydrolase complex, plasma-membrane calciu; 1.95A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.92 E-value=2.1e-06 Score=64.82 Aligned_cols=26 Identities=19% Similarity=0.261 Sum_probs=24.6
Q ss_pred chHHHHhHHHhhhhhccchhhhhccc
Q 003371 23 LTKAQKRWRLAYWTIYSFRAMLSVLP 48 (825)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 48 (825)
+.++++|||+|++|+|++|||+++++
T Consensus 2 s~e~L~rWR~a~lVlNa~RRFR~t~d 27 (57)
T 4aqr_D 2 SIERLQQWRKAALVLNASRRFRYTLD 27 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhchHhhhhhhcc
Confidence 57999999999999999999999987
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.92 E-value=1.9e-05 Score=80.01 Aligned_cols=122 Identities=11% Similarity=0.147 Sum_probs=84.1
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+... ..-.
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f-----~~i~~~~~~~~----------------~Kp~ 161 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYF-----DSIIGSGDTGT----------------IKPS 161 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC-----SEEEEETSSSC----------------CTTS
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhe-----eeEEcccccCC----------------CCCC
Confidence 46799999999999999999999999999999999999986421 12222221110 1112
Q ss_pred HHHHHHHHHHHHhCCC-EEEEEcCCccCHHHhhhCCc-cEecCCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 745 PFDKLLMVQCLKKKGH-VVAVTGDGTNDAPALKEADV-GLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~-vVa~~GDG~NDapALk~AdV-Giamg~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
|+--..+.+.+.-..+ .+.++||+.||..|.+.|++ ++.++ .+.+ ..+|.++- +|..+..++.
T Consensus 162 ~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~-~~~~---~~~~~~~~--~~~el~~~l~ 226 (231)
T 3kzx_A 162 PEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYG-STNI---IKDILSFK--NFYDIRNFIC 226 (231)
T ss_dssp SHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEEC-C--------CCEEES--SHHHHHHHHH
T ss_pred hHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEEC-CCCC---CCCceeeC--CHHHHHHHHH
Confidence 2222344444443344 68899999999999999997 77777 4444 35677765 7888888774
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=97.90 E-value=6e-05 Score=78.44 Aligned_cols=143 Identities=18% Similarity=0.166 Sum_probs=86.1
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCH------HHHH-HHHHHcCC-ccccc-------ccccceeeechhhhcCCHHHH
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNV------FTAK-AIATECGI-LRLDQ-------QVEKGEVVEGVEFRNYTDEER 730 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~------~tA~-aIA~~~GI-~~~~~-------~~~~~~vi~G~~~~~~~~~~~ 730 (825)
.++.+++.++.+++.|+.+.+.|+|.. .... ..-+.+++ ..... ......++.+.+-. ..++
T Consensus 86 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~---~~~~ 162 (261)
T 2rbk_A 86 PQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFITEEE---EKEV 162 (261)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEECCCHHH---HHHH
T ss_pred CHHHHHHHHHHHHHcCCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCccccchhccCceeEEEEEeCHHH---HHHH
Confidence 467789999999999999888888764 1111 11122232 00000 00011122111100 0112
Q ss_pred HhhccCeeEEEecC---------HHHHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcC
Q 003371 731 IQKVDKIRVMARSS---------PFDKLLMVQCLKKK----GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSD 797 (825)
Q Consensus 731 ~~~~~~~~V~ar~s---------P~dK~~lV~~Lq~~----g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaD 797 (825)
...++.+.+. ++. ...|...++.+.++ .+.+.++||+.||.+|++.|++|++|| ++.+..|+.||
T Consensus 163 ~~~~~~~~~~-~s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~ 240 (261)
T 2rbk_A 163 LPSIPTCEIG-RWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAAD 240 (261)
T ss_dssp GGGSTTCEEE-CSSTTCCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSS
T ss_pred HHhcCCeEEE-EecCCeEEecCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEec-CccHHHHhhCC
Confidence 2223333322 222 23677777766543 246889999999999999999999999 78888899999
Q ss_pred eeeccCCchHHHHHHH
Q 003371 798 IVILDDDFTSVATVLS 813 (825)
Q Consensus 798 ivlldd~f~sIv~~i~ 813 (825)
.++.+.+=..+..+++
T Consensus 241 ~v~~~~~~dGv~~~l~ 256 (261)
T 2rbk_A 241 YVTAPIDEDGISKAMK 256 (261)
T ss_dssp EECCCGGGTHHHHHHH
T ss_pred EEeccCchhhHHHHHH
Confidence 9987655556888775
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.90 E-value=2.4e-05 Score=81.31 Aligned_cols=128 Identities=15% Similarity=0.068 Sum_probs=88.7
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...++.+..... ..-.
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~----------------~kp~ 170 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYT----PASTVFATDVVR----------------GRPF 170 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCC----CSEEECGGGSSS----------------CTTS
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCC----CceEecHHhcCC----------------CCCC
Confidence 56799999999999999999999999999999999998875420 122333322111 1112
Q ss_pred HHHHHHHHHHHHhCC-CEEEEEcCCccCHHHhhhCC---ccEecCCC-----------------------chHHHH-Hhc
Q 003371 745 PFDKLLMVQCLKKKG-HVVAVTGDGTNDAPALKEAD---VGLSMGIQ-----------------------GTEVAK-ESS 796 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g-~vVa~~GDG~NDapALk~Ad---VGiamg~~-----------------------gt~vAk-~aa 796 (825)
|.-=..+.+.+.-.. +.+.|+||+.||..|.+.|+ |++++|.+ ..+..+ ..+
T Consensus 171 ~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a 250 (277)
T 3iru_A 171 PDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGA 250 (277)
T ss_dssp SHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCC
Confidence 222233444444345 67899999999999999999 67888732 123333 449
Q ss_pred CeeeccCCchHHHHHHHH
Q 003371 797 DIVILDDDFTSVATVLSP 814 (825)
Q Consensus 797 Divlldd~f~sIv~~i~~ 814 (825)
|+|+- ++..+..++..
T Consensus 251 d~v~~--~~~el~~~l~~ 266 (277)
T 3iru_A 251 HYVID--SVADLETVITD 266 (277)
T ss_dssp SEEES--SGGGTHHHHHH
T ss_pred CEEec--CHHHHHHHHHH
Confidence 99986 78888877753
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.87 E-value=2e-05 Score=79.56 Aligned_cols=124 Identities=11% Similarity=0.103 Sum_probs=83.9
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEe
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDN---VFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMAR 742 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~---~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar 742 (825)
+.|++.+.++.|++.|+++.++|+.. ...+..+.+.+|+... ...++.+.++... .
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~-----f~~~~~~~~~~~~----------------k 158 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEF-----IDKTFFADEVLSY----------------K 158 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGG-----CSEEEEHHHHTCC----------------T
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHH-----hhhheeccccCCC----------------C
Confidence 47999999999999999999999999 8888899999998643 1223333322111 1
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEEcCCc-cCHHHhhhCCccEec---CCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 743 SSPFDKLLMVQCLKKKGHVVAVTGDGT-NDAPALKEADVGLSM---GIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 743 ~sP~dK~~lV~~Lq~~g~vVa~~GDG~-NDapALk~AdVGiam---g~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
..|+--..+.+.+.-..+.+.++||+. ||..|++.|+++++| | +..+-.+..+|.++- ++..+..+++
T Consensus 159 p~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~-~~~~~~~~~~~~~~~--~~~el~~~l~ 230 (235)
T 2om6_A 159 PRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQE-GDKVRKLEERGFEIP--SIANLKDVIE 230 (235)
T ss_dssp TCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTT-CCSCEEEETTEEEES--SGGGHHHHHH
T ss_pred CCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCC-CCCcccCCCCcchHh--hHHHHHHHHH
Confidence 122222223333322235688999999 999999999999999 5 222222345787764 7777777664
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=2.4e-05 Score=79.93 Aligned_cols=124 Identities=11% Similarity=0.091 Sum_probs=85.2
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.+... ..-.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~-----f~~~~~~~~~~~----------------~Kp~ 163 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRV-----LDSCLSADDLKI----------------YKPD 163 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG-----CSEEEEGGGTTC----------------CTTS
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHH-----cCEEEEccccCC----------------CCCC
Confidence 5789999999999999999999999999999999999998643 122333332211 1112
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCC---ccEecCCCchHHHHHhc-CeeeccCCchHHHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEAD---VGLSMGIQGTEVAKESS-DIVILDDDFTSVATVL 812 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~Ad---VGiamg~~gt~vAk~aa-Divlldd~f~sIv~~i 812 (825)
|+--..+.+.+.-..+.+.++||+.||..|.+.|+ +++..|. +.+..+..+ |.++- ++..+...+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~-~~~~~~~~~~~~~~~--~~~el~~~l 232 (240)
T 2no4_A 164 PRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQG-NPPEYEFAPLKHQVN--SLSELWPLL 232 (240)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTC-CCCCCTTSCCSEEES--SGGGHHHHH
T ss_pred HHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCC-CCCcccCCCCceeeC--CHHHHHHHH
Confidence 33333344444333456889999999999999999 5555563 222233456 88875 677777665
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.80 E-value=1.5e-05 Score=80.72 Aligned_cols=125 Identities=10% Similarity=0.074 Sum_probs=86.6
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+.. ...-.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~Kp~ 153 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF-----DHLLSVDPVQ----------------VYKPD 153 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC-----SEEEESGGGT----------------CCTTS
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhh-----heEEEecccC----------------CCCCC
Confidence 57799999999999999999999999999999999999986421 2233332221 11123
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCc---hHHHHHhcCeeeccCCchHHHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQG---TEVAKESSDIVILDDDFTSVATVL 812 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~g---t~vAk~aaDivlldd~f~sIv~~i 812 (825)
|.--..+.+.+.-..+.+.++||+.||..|.+.|+++.+|-..+ .+..+..+|.++. ++..+...+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 222 (232)
T 1zrn_A 154 NRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVELF 222 (232)
T ss_dssp HHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHTTC
T ss_pred HHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEEC--CHHHHHHHH
Confidence 33333444444433456889999999999999999999883222 2223456888875 677776554
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.80 E-value=1.3e-05 Score=84.35 Aligned_cols=130 Identities=12% Similarity=-0.002 Sum_probs=86.3
Q ss_pred CCCcccHHHHHHHHHhCCC--eEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEE
Q 003371 664 DPCRPGVQKAVEACQSAGV--EIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMA 741 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI--~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~a 741 (825)
-++.|++.+.++.|++.|+ ++.++|+.....+..+.+.+|+.... ..++.+...... ...+
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~f-----d~v~~~~~~~~~------------~~~~ 203 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLF-----DGLTYCDYSRTD------------TLVC 203 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSC-----SEEECCCCSSCS------------SCCC
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCccccc-----ceEEEeccCCCc------------ccCC
Confidence 3578999999999999999 99999999999999999999986531 122222111000 0011
Q ss_pred ecCHHHHHHHHHHHHhCC-CEEEEEcCCccCHHHhhhCCccEecCCCchHHH-----HHhcCeeeccCCchHHHHHH
Q 003371 742 RSSPFDKLLMVQCLKKKG-HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVA-----KESSDIVILDDDFTSVATVL 812 (825)
Q Consensus 742 r~sP~dK~~lV~~Lq~~g-~vVa~~GDG~NDapALk~AdVGiamg~~gt~vA-----k~aaDivlldd~f~sIv~~i 812 (825)
.-.|+-=..+.+.+.-.. +.+.++||+.||..|.+.|++|.+|+....... ...+|+++- ++..+..++
T Consensus 204 Kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~--sl~el~~~l 278 (282)
T 3nuq_A 204 KPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVIS--DILELPHVV 278 (282)
T ss_dssp TTSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEES--SGGGGGGTS
T ss_pred CcCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeC--CHHHHHHHh
Confidence 112222223333333334 678999999999999999999999985433321 236788876 676666544
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00014 Score=74.27 Aligned_cols=125 Identities=18% Similarity=0.134 Sum_probs=85.2
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.+... ..-.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~-----f~~~~~~~~~~~----------------~Kp~ 152 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDF-----FEHVIISDFEGV----------------KKPH 152 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGG-----CSEEEEGGGGTC----------------CTTC
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhh-----ccEEEEeCCCCC----------------CCCC
Confidence 4679999999999999999999999999999999999998642 122333322211 1112
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCc-cCHHHhhhCCccEec---CCCchHHHHH---hcCeeeccCCchHHHHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGT-NDAPALKEADVGLSM---GIQGTEVAKE---SSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~-NDapALk~AdVGiam---g~~gt~vAk~---aaDivlldd~f~sIv~~i~ 813 (825)
|+-=..+.+.+.-..+.+.++||+. ||..|.+.|+++..+ | .+...... .+|.++- ++..+...+.
T Consensus 153 ~~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g-~~~~~~~~~~~~~~~~i~--~~~el~~~l~ 225 (241)
T 2hoq_A 153 PKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYG-KHSERELEYRKYADYEID--NLESLLEVLA 225 (241)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCS-CCCHHHHTTGGGCSEEES--STTHHHHHHH
T ss_pred HHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCC-CCCcccccccCCCCEEEC--CHHHHHHHHH
Confidence 2222233333333345688999998 999999999987554 4 23333332 6898875 7888887774
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.76 E-value=4.4e-05 Score=74.40 Aligned_cols=125 Identities=16% Similarity=0.067 Sum_probs=80.6
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcC--Ccccccccccceee-echhhhcCC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNV---------------FTAKAIATECG--ILRLDQQVEKGEVV-EGVEFRNYT 726 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~---------------~tA~aIA~~~G--I~~~~~~~~~~~vi-~G~~~~~~~ 726 (825)
++.|++.++++.|+++|+++.++|+... ..+..+.+++| +..-. .... .+.+..
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-----~~~~~~~~~~~--- 98 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIF-----MCPHGPDDGCA--- 98 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEE-----EECCCTTSCCS---
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEE-----EcCCCCCCCCC---
Confidence 5789999999999999999999999885 56667777787 32100 0000 000000
Q ss_pred HHHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCC---ccEecCCCchHHHH----HhcCee
Q 003371 727 DEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEAD---VGLSMGIQGTEVAK----ESSDIV 799 (825)
Q Consensus 727 ~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~Ad---VGiamg~~gt~vAk----~aaDiv 799 (825)
...-.|+-=..+.+.+.-..+.+.|+||+.||..+.+.|+ |++++| .+..... ..+|.+
T Consensus 99 -------------~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~~d~v 164 (179)
T 3l8h_A 99 -------------CRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTG-NGRKTLAQGGLPEGTRV 164 (179)
T ss_dssp -------------SSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTT-THHHHHHHCCCCTTEEE
T ss_pred -------------CCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCC-CcchhhhhcccCCCcEE
Confidence 0001121112233333333466899999999999999999 588888 4444444 357888
Q ss_pred eccCCchHHHHHHH
Q 003371 800 ILDDDFTSVATVLS 813 (825)
Q Consensus 800 lldd~f~sIv~~i~ 813 (825)
+- ++..+...+.
T Consensus 165 ~~--~l~el~~~l~ 176 (179)
T 3l8h_A 165 CE--DLAAVAEQLL 176 (179)
T ss_dssp ES--SHHHHHHHHH
T ss_pred ec--CHHHHHHHHH
Confidence 77 7888887764
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.73 E-value=4.4e-05 Score=77.85 Aligned_cols=128 Identities=13% Similarity=0.126 Sum_probs=81.6
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
.++.|++.+.++.|++.|+++.++|+.....+....+. |+..... ...++.+.+... ...
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~---~~~~~~~~~~~~----------------~kp 166 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQ---ANLMVTAFDVKY----------------GKP 166 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCC---GGGEECGGGCSS----------------CTT
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcC---CCeEEecccCCC----------------CCC
Confidence 46789999999999999999999999998877777777 8764210 022333332211 112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc---EecCCCchH-HHHHhcCeeeccCCchHHHHHHH
Q 003371 744 SPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVG---LSMGIQGTE-VAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVG---iamg~~gt~-vAk~aaDivlldd~f~sIv~~i~ 813 (825)
.|.--..+.+.+.-..+.+.++||+.||..|.+.|++. +..|....+ ..+..+|+++- ++..+..+++
T Consensus 167 ~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~--~~~el~~~l~ 238 (247)
T 3dv9_A 167 NPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFH--SMPDFNKNWE 238 (247)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEES--SHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEEC--CHHHHHHHHH
Confidence 23333344444443345688999999999999999954 333321112 22237999986 7888887765
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.72 E-value=4.1e-05 Score=79.14 Aligned_cols=129 Identities=14% Similarity=0.103 Sum_probs=87.9
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccce-eeechhhhcCCHHHHHhhccCeeEEEe
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGE-VVEGVEFRNYTDEERIQKVDKIRVMAR 742 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~-vi~G~~~~~~~~~~~~~~~~~~~V~ar 742 (825)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... .. ++.+.+... ...
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f-----~~~i~~~~~~~~---------------~~K 168 (259)
T 4eek_A 109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELA-----GEHIYDPSWVGG---------------RGK 168 (259)
T ss_dssp CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHH-----CSCEECGGGGTT---------------CCT
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhc-----cceEEeHhhcCc---------------CCC
Confidence 346799999999999999999999999999999999999985421 11 333332210 011
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc-EecCCCc-------h-HHHHHhcCeeeccCCchHHHHHHH
Q 003371 743 SSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVG-LSMGIQG-------T-EVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 743 ~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVG-iamg~~g-------t-~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
-.|+-=..+.+.+.-..+.+.++||+.||..|.+.|+++ +.+. .| . +..+..+|+++- ++..+..+++
T Consensus 169 p~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ad~vi~--~l~el~~~l~ 245 (259)
T 4eek_A 169 PHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLL-VPGHPHPDGAAALSRLGAARVLT--SHAELRAALA 245 (259)
T ss_dssp TSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEC-CTTSCCSSCHHHHHHHTCSEEEC--SHHHHHHHHH
T ss_pred CChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEc-cCCCcccccHHHHHhcCcchhhC--CHHHHHHHHH
Confidence 112222223333322345689999999999999999998 4443 23 2 333455899986 8999999886
Q ss_pred Hh
Q 003371 814 PG 815 (825)
Q Consensus 814 ~g 815 (825)
..
T Consensus 246 ~~ 247 (259)
T 4eek_A 246 EA 247 (259)
T ss_dssp HT
T ss_pred hc
Confidence 54
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=0.0001 Score=74.23 Aligned_cols=136 Identities=16% Similarity=0.119 Sum_probs=82.9
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCC---------------HHHHHHHHHHcCCcccccccccceeeechhhhcCCHHH
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDN---------------VFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEE 729 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~---------------~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~ 729 (825)
++.|++.++++.|+++|+++.++|+.. ...+..+.+++|+. . ...+..+.........
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-f-----~~~~~~~~~~~~~~~~- 122 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD-L-----DGIYYCPHHPQGSVEE- 122 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC-C-----SEEEEECCBTTCSSGG-
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc-e-----EEEEECCcCCCCcccc-
Confidence 678999999999999999999999999 46777888888874 1 1111111000000000
Q ss_pred HHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCC----ccEecCCCchHHHHHhcCeeeccCCc
Q 003371 730 RIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEAD----VGLSMGIQGTEVAKESSDIVILDDDF 805 (825)
Q Consensus 730 ~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~Ad----VGiamg~~gt~vAk~aaDivlldd~f 805 (825)
.........-.|+-=..+.+.+.-..+.+.|+||+.||..+.+.|+ |++..|....+.....+|.++- ++
T Consensus 123 ----~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~--~l 196 (211)
T 2gmw_A 123 ----FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLN--SL 196 (211)
T ss_dssp ----GBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEES--CG
T ss_pred ----cCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeC--CH
Confidence 0000001112232223333444333456889999999999999999 4555553333444456899875 78
Q ss_pred hHHHHHHH
Q 003371 806 TSVATVLS 813 (825)
Q Consensus 806 ~sIv~~i~ 813 (825)
..+..++.
T Consensus 197 ~el~~~l~ 204 (211)
T 2gmw_A 197 ADLPQAIK 204 (211)
T ss_dssp GGHHHHHH
T ss_pred HHHHHHHH
Confidence 88887764
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.68 E-value=4.3e-05 Score=78.15 Aligned_cols=127 Identities=13% Similarity=0.182 Sum_probs=83.6
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
-++.|++.+.++.|++.|+++.++|+.....+....+. |+..... ...++.+.+... ...
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~---~d~i~~~~~~~~----------------~kp 167 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFH---KELMVTAFDVKY----------------GKP 167 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCC---GGGEECTTTCSS----------------CTT
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcC---cceEEeHHhCCC----------------CCC
Confidence 35779999999999999999999999988877777777 7754210 022333332211 111
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc-EecCCCchH----HHHHhcCeeeccCCchHHHHHHH
Q 003371 744 SPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVG-LSMGIQGTE----VAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVG-iamg~~gt~----vAk~aaDivlldd~f~sIv~~i~ 813 (825)
.|+--..+.+.+.-..+.+.++||+.||..|.+.|+++ +.++ .|.. ..+..+|+++- ++..+..+++
T Consensus 168 ~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~--s~~el~~~l~ 239 (243)
T 3qxg_A 168 NPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVN-TGPLDGQVLLDAGADLLFP--SMQTLCDSWD 239 (243)
T ss_dssp SSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEEC-CSSSCHHHHHHTTCSEEES--CHHHHHHHHH
T ss_pred ChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEe-CCCCCHHHHHhcCCCEEEC--CHHHHHHHHH
Confidence 22222233333332345688999999999999999984 4444 3332 23346999985 8888888765
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.65 E-value=3.6e-05 Score=77.37 Aligned_cols=116 Identities=9% Similarity=0.051 Sum_probs=80.2
Q ss_pred CCcccHHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 665 PCRPGVQKAVEACQSAG-VEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 665 plR~~v~~aI~~l~~aG-I~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
++.|++.+.++.|++.| +++.++|+........+.+.+|+..... . +++..
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~-----~-----------------------~~~~~ 156 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFD-----H-----------------------IEVMS 156 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCS-----E-----------------------EEEES
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhh-----e-----------------------eeecC
Confidence 56799999999999999 9999999999999999999999864211 1 23333
Q ss_pred CHHHHHHHHHHHHh----CCCEEEEEcCCc-cCHHHhhhCCccEecCC------CchHHHHHhc-CeeeccCCchHHHHH
Q 003371 744 SPFDKLLMVQCLKK----KGHVVAVTGDGT-NDAPALKEADVGLSMGI------QGTEVAKESS-DIVILDDDFTSVATV 811 (825)
Q Consensus 744 sP~dK~~lV~~Lq~----~g~vVa~~GDG~-NDapALk~AdVGiamg~------~gt~vAk~aa-Divlldd~f~sIv~~ 811 (825)
.| |...++.+.+ ..+-+.++||+. ||..|.+.|+++.+|=. .+....+..+ |+++- ++..++.+
T Consensus 157 kp--k~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~--~l~el~~~ 232 (234)
T 3ddh_A 157 DK--TEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVK--RLDDLLSL 232 (234)
T ss_dssp CC--SHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECS--SGGGHHHH
T ss_pred CC--CHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecc--cHHHHHHh
Confidence 34 3333333332 235688999996 99999999999888721 2222223333 77765 67777654
Q ss_pred H
Q 003371 812 L 812 (825)
Q Consensus 812 i 812 (825)
+
T Consensus 233 l 233 (234)
T 3ddh_A 233 L 233 (234)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.65 E-value=7.7e-05 Score=76.31 Aligned_cols=125 Identities=10% Similarity=0.105 Sum_probs=82.4
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.|++.+.++.|++.|+++.++|+.....+..+-+.+|+. . ...++.+.+.. ...-.
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~-----f~~~~~~~~~~----------------~~Kp~ 167 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-S-----FDFALGEKSGI----------------RRKPA 167 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-T-----CSEEEEECTTS----------------CCTTS
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-c-----eeEEEecCCCC----------------CCCCC
Confidence 35699999999999999999999999988889999999874 2 12233322211 00111
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc---EecCCCc-hHHHHHhcCeeeccCCchHHHHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVG---LSMGIQG-TEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVG---iamg~~g-t~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
|+-=..+.+.+.-..+.+.|+||+.||..|.+.|++. +++|... .+..+..+|.++. ++..+...+.
T Consensus 168 p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~--~~~el~~~l~ 238 (240)
T 2hi0_A 168 PDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVD--TAEKLEEAIL 238 (240)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEEC--SHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEEC--CHHHHHHHhc
Confidence 2111222333322245689999999999999999984 6666322 2333346898875 6877776653
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00013 Score=71.26 Aligned_cols=107 Identities=18% Similarity=0.108 Sum_probs=70.9
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCH
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSP 745 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP 745 (825)
+.|++.+.++.|++.|+++.++|+... .+..+.+.+|+... ...++.+.+... ....|
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~-----f~~~~~~~~~~~----------------~kp~~ 140 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAY-----FTEVVTSSSGFK----------------RKPNP 140 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGG-----EEEEECGGGCCC----------------CTTSC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhh-----eeeeeeccccCC----------------CCCCH
Confidence 679999999999999999999998864 56778888887542 122333222110 01112
Q ss_pred HHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcC
Q 003371 746 FDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSD 797 (825)
Q Consensus 746 ~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaD 797 (825)
+--..+.+.+.-. .+.++||+.||.+|++.|++++++. +...-.++..+
T Consensus 141 ~~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~l~ 189 (190)
T 2fi1_A 141 ESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLF-TSIVNLRQVLD 189 (190)
T ss_dssp HHHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEEC-SCHHHHHHHHT
T ss_pred HHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEE-CCCCChhhccC
Confidence 2222233333222 6889999999999999999998887 44444555554
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.61 E-value=1.2e-05 Score=80.12 Aligned_cols=121 Identities=10% Similarity=0.143 Sum_probs=80.8
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+... ...++.+.+... ..-.
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~-----f~~~~~~~~~~~----------------~KP~ 140 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMR-----MAVTISADDTPK----------------RKPD 140 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGG-----EEEEECGGGSSC----------------CTTS
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhh-----ccEEEecCcCCC----------------CCCC
Confidence 4689999999999999 99999999999999999999888542 122333222210 0011
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCC---CchHHHHHhcCeeeccCCchHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGI---QGTEVAKESSDIVILDDDFTSVAT 810 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~---~gt~vAk~aaDivlldd~f~sIv~ 810 (825)
|+--..+.+.+.-..+.+.++||+.||.+|.+.|+++++|.. ...+..++ +|+++. ++..+..
T Consensus 141 ~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~--~~~el~~ 206 (209)
T 2hdo_A 141 PLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQ--KPLDILE 206 (209)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEES--SGGGGGG
T ss_pred cHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeC--CHHHHHH
Confidence 222233334333234568999999999999999999999742 12333344 898875 4555443
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.61 E-value=8.1e-05 Score=73.70 Aligned_cols=122 Identities=11% Similarity=0.123 Sum_probs=84.5
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.|++.+ ++.|++. +++.++|+.....+..+.+.+|+... ...++.+.+... ..-.
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~-----f~~~~~~~~~~~----------------~Kp~ 130 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRY-----FKGIFSAESVKE----------------YKPS 130 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGG-----CSEEEEGGGGTC----------------CTTC
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHh-----CcEEEehhhcCC----------------CCCC
Confidence 56799999 9999999 99999999999999999999998643 122333332211 1112
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCC---CchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGI---QGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~---~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
|+--..+.+.+. .+.+.|+||+.||..|.+.|+++..+-. ++.+..+..+|.++- ++..+...+.
T Consensus 131 ~~~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l~ 198 (201)
T 2w43_A 131 PKVYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVN--DFKELYEWIL 198 (201)
T ss_dssp HHHHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEES--SHHHHHHHHH
T ss_pred HHHHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEEC--CHHHHHHHHH
Confidence 333344455554 4567899999999999999999987711 222222446888775 6888777664
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.59 E-value=4.9e-05 Score=79.71 Aligned_cols=115 Identities=17% Similarity=0.058 Sum_probs=78.2
Q ss_pred CCcccHHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 665 PCRPGVQKAVEACQSA-GVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 665 plR~~v~~aI~~l~~a-GI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
++.|++.+.++.|++. |+++.++|+.....+..+.+.+|+.. ...++.+.+...- ..
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~------f~~i~~~~~~~~~----------------kp 171 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR------PEYFITANDVKQG----------------KP 171 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC------CSSEECGGGCSSC----------------TT
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc------cCEEEEcccCCCC----------------CC
Confidence 3479999999999999 99999999999999999999998752 1234444432110 11
Q ss_pred CHHHHHHHHHHHHh-------CCCEEEEEcCCccCHHHhhhCCccEec---CCCchHHHHHhcCeeec
Q 003371 744 SPFDKLLMVQCLKK-------KGHVVAVTGDGTNDAPALKEADVGLSM---GIQGTEVAKESSDIVIL 801 (825)
Q Consensus 744 sP~dK~~lV~~Lq~-------~g~vVa~~GDG~NDapALk~AdVGiam---g~~gt~vAk~aaDivll 801 (825)
.|+--..+.+.+.- ..+.+.++||+.||..|++.|+++++| |.+..+..+..||.++.
T Consensus 172 ~~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~ 239 (275)
T 2qlt_A 172 HPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVK 239 (275)
T ss_dssp SSHHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEES
T ss_pred ChHHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEEC
Confidence 23222334444433 334589999999999999999966555 63333333345898875
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00012 Score=74.00 Aligned_cols=124 Identities=8% Similarity=0.034 Sum_probs=85.0
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
-++.|++.+.++.|+ .|+++.++|+.....+..+.+.+|+... ...++.+.+... ...
T Consensus 106 ~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~-----f~~~~~~~~~~~----------------~kp 163 (240)
T 3qnm_A 106 SGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRY-----FKKIILSEDLGV----------------LKP 163 (240)
T ss_dssp CCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGG-----CSEEEEGGGTTC----------------CTT
T ss_pred CCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhh-----ceeEEEeccCCC----------------CCC
Confidence 356799999999999 9999999999999999999999998653 122333332211 111
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCc-cCHHHhhhCCccEecCCCchH-HHHHhcCeeeccCCchHHHHH
Q 003371 744 SPFDKLLMVQCLKKKGHVVAVTGDGT-NDAPALKEADVGLSMGIQGTE-VAKESSDIVILDDDFTSVATV 811 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~g~vVa~~GDG~-NDapALk~AdVGiamg~~gt~-vAk~aaDivlldd~f~sIv~~ 811 (825)
.|.--..+.+.+.-..+.+.++||+. ||..|.+.|+++++|...+.. ..+..+|+++- ++..+..+
T Consensus 164 ~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~--sl~e~~~~ 231 (240)
T 3qnm_A 164 RPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIH--SLKELMNL 231 (240)
T ss_dssp SHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEES--STHHHHHH
T ss_pred CHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEEC--CHHHHHHH
Confidence 12222222233322235689999995 999999999999999865542 34567899886 56666554
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00011 Score=75.89 Aligned_cols=124 Identities=12% Similarity=0.110 Sum_probs=86.2
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.|++.+.++.|+ |+++.++|+.....+..+.+.+|+.... ..++.+.+.. ...-.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f-----~~~~~~~~~~----------------~~Kp~ 149 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF-----DAVISVDAKR----------------VFKPH 149 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC-----SEEEEGGGGT----------------CCTTS
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhc-----cEEEEccccC----------------CCCCC
Confidence 67899999999999 9999999999999999999999986431 2233333221 11122
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCC-----------------------c---hHHHHHhcCe
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQ-----------------------G---TEVAKESSDI 798 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~-----------------------g---t~vAk~aaDi 798 (825)
|.--..+.+.+.-..+.+.|+||+.||..|.+.|+++.+|... + .+..+..+|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~ 229 (253)
T 1qq5_A 150 PDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDF 229 (253)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSE
T ss_pred HHHHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCe
Confidence 3333334444433335688999999999999999999988743 1 1222346888
Q ss_pred eeccCCchHHHHHHH
Q 003371 799 VILDDDFTSVATVLS 813 (825)
Q Consensus 799 vlldd~f~sIv~~i~ 813 (825)
++- ++..+..++.
T Consensus 230 ~~~--~~~el~~~l~ 242 (253)
T 1qq5_A 230 VVP--ALGDLPRLVR 242 (253)
T ss_dssp EES--SGGGHHHHHH
T ss_pred eeC--CHHHHHHHHH
Confidence 875 7888887764
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00013 Score=73.21 Aligned_cols=124 Identities=12% Similarity=0.130 Sum_probs=80.9
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.|++.+.++.++. ++.++|+........+.+++|+..... ..++.+.....- . ....
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~----~~~~~~~~~~~~------------~--~kpk 145 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFA----PHIYSAKDLGAD------------R--VKPK 145 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTT----TCEEEHHHHCTT------------C--CTTS
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhcc----ceEEeccccccC------------C--CCcC
Confidence 457888888888764 999999999999999999999864210 123332221100 0 0012
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc-EecCCCchH-------HHHHh-cCeeeccCCchHHHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVG-LSMGIQGTE-------VAKES-SDIVILDDDFTSVATVL 812 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVG-iamg~~gt~-------vAk~a-aDivlldd~f~sIv~~i 812 (825)
|.--..+.+.+.-..+.+.++||+.||.+|++.|+++ ++++ ++.. ..++. ||+++. ++..+..++
T Consensus 146 ~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~-~~~~~~~~~~~~l~~~~ad~v~~--~~~el~~~l 219 (229)
T 2fdr_A 146 PDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVIS--RMQDLPAVI 219 (229)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEES--CGGGHHHHH
T ss_pred HHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEe-cCCccchhhhHHHhhcCCceeec--CHHHHHHHH
Confidence 2222333444433345688999999999999999998 7776 4443 35666 999885 677777665
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00015 Score=73.34 Aligned_cols=124 Identities=10% Similarity=0.074 Sum_probs=85.7
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
-++.|++.+.++.|++. +++.++|+.....+..+.+.+|+... ...++.+.+... ..-
T Consensus 102 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~-----f~~~~~~~~~~~----------------~kp 159 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPF-----FKDIFVSEDTGF----------------QKP 159 (238)
T ss_dssp CCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGG-----CSEEEEGGGTTS----------------CTT
T ss_pred CCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhh-----hheEEEecccCC----------------CCC
Confidence 35779999999999999 99999999999999999999998653 122333322211 011
Q ss_pred CHHHHHHHHHHHHhCC----CEEEEEcCCc-cCHHHhhhCCccEecCCCc--hHHHHHhcCeeeccCCchHHHHHHHH
Q 003371 744 SPFDKLLMVQCLKKKG----HVVAVTGDGT-NDAPALKEADVGLSMGIQG--TEVAKESSDIVILDDDFTSVATVLSP 814 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~g----~vVa~~GDG~-NDapALk~AdVGiamg~~g--t~vAk~aaDivlldd~f~sIv~~i~~ 814 (825)
.|. .+-+.+++.| +.+.++||+. ||..|.+.|+++..+-..| .+..+..+|+++. ++..+..+++.
T Consensus 160 ~~~---~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~--~~~el~~~l~~ 232 (238)
T 3ed5_A 160 MKE---YFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIR--KLEELYHILNI 232 (238)
T ss_dssp CHH---HHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEES--SGGGHHHHHTC
T ss_pred ChH---HHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEEC--CHHHHHHHHHh
Confidence 121 2223333344 5689999998 9999999999953332233 4455667899986 78888887753
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.46 E-value=3.3e-05 Score=79.39 Aligned_cols=119 Identities=17% Similarity=0.209 Sum_probs=77.6
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH-HHcCCcccccccccceeeech--hhhcCCHHHHHhhccCeeEE
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIA-TECGILRLDQQVEKGEVVEGV--EFRNYTDEERIQKVDKIRVM 740 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA-~~~GI~~~~~~~~~~~vi~G~--~~~~~~~~~~~~~~~~~~V~ 740 (825)
-++.|++.+.++.|++.|+++.++|+.....+...- +..|+... ...++.+. +..
T Consensus 111 ~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~-----f~~~~~~~~~~~~----------------- 168 (250)
T 3l5k_A 111 AALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSL-----FSHIVLGDDPEVQ----------------- 168 (250)
T ss_dssp CCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTT-----SSCEECTTCTTCC-----------------
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhh-----eeeEEecchhhcc-----------------
Confidence 357899999999999999999999999876655433 22344321 11222222 111
Q ss_pred EecCHHHHHHHHHHHHhCC-----CEEEEEcCCccCHHHhhhCC---ccEecCCCchHHHHHhcCeeeccCCchHHH
Q 003371 741 ARSSPFDKLLMVQCLKKKG-----HVVAVTGDGTNDAPALKEAD---VGLSMGIQGTEVAKESSDIVILDDDFTSVA 809 (825)
Q Consensus 741 ar~sP~dK~~lV~~Lq~~g-----~vVa~~GDG~NDapALk~Ad---VGiamg~~gt~vAk~aaDivlldd~f~sIv 809 (825)
...|.- ..+-..+++.| +.+.++||+.||..|.+.|+ |++++| .+.+..+..||.++- ++..+.
T Consensus 169 -~~Kp~~-~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~ad~v~~--sl~el~ 240 (250)
T 3l5k_A 169 -HGKPDP-DIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDG-NLSRDLTTKATLVLN--SLQDFQ 240 (250)
T ss_dssp -SCTTST-HHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCT-TSCGGGSTTSSEECS--CGGGCC
T ss_pred -CCCCCh-HHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCC-CCchhhcccccEeec--CHHHhh
Confidence 111211 12233344433 67899999999999999999 777778 455557888999985 555543
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=9.5e-05 Score=76.28 Aligned_cols=67 Identities=13% Similarity=0.120 Sum_probs=56.1
Q ss_pred HHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHh-------cCeeeccCCchHHHHHHHH
Q 003371 747 DKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKES-------SDIVILDDDFTSVATVLSP 814 (825)
Q Consensus 747 dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~a-------aDivlldd~f~sIv~~i~~ 814 (825)
+|...++.+.+. | ..|+++||+.||.+|++.|++|++|| ++.+..|+. ||++..+.+-..|.+++++
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~-na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~~ 239 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEc-CCcHHHHHHHhcccccceeecCCcchhHHHHHHHH
Confidence 687777777654 2 45889999999999999999999999 788888885 7899888777888888863
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00012 Score=72.01 Aligned_cols=88 Identities=15% Similarity=0.064 Sum_probs=64.6
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDN-VFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~-~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
++.|++.++++.|++.|+++.++||.. ...+..+.+.+|+..... . ++.
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~----~------------------------~~~-- 117 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFV----H------------------------REI-- 117 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEE----E------------------------EEE--
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcc----e------------------------eEE--
Confidence 578999999999999999999999998 799999999999864210 0 101
Q ss_pred CHHHHHHH-HHHHHhC---CCEEEEEcCCccCHHHhhhCCccE
Q 003371 744 SPFDKLLM-VQCLKKK---GHVVAVTGDGTNDAPALKEADVGL 782 (825)
Q Consensus 744 sP~dK~~l-V~~Lq~~---g~vVa~~GDG~NDapALk~AdVGi 782 (825)
.+..|... .+.+++. .+.+.|+||+.||..+.++|++..
T Consensus 118 ~~~~k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~ 160 (187)
T 2wm8_A 118 YPGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTC 160 (187)
T ss_dssp SSSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred EeCchHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEE
Confidence 11223222 2333333 345889999999999999998753
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00024 Score=71.05 Aligned_cols=117 Identities=15% Similarity=0.133 Sum_probs=80.9
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.+.++.|++ |+++.++|+.....+..+-+.+|+..... .++ .+...
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~-----~i~----------------------~~~~~ 135 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFD-----GIY----------------------GSSPE 135 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCS-----EEE----------------------EECSS
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhee-----eee----------------------cCCCC
Confidence 467999999999999 99999999999888888999999865311 111 11101
Q ss_pred HHHHHHH-HHHHHhCC---CEEEEEcCCccCHHHhhhCCc---cEecCCCchHHHH-HhcCeeeccCCchHHHHH
Q 003371 745 PFDKLLM-VQCLKKKG---HVVAVTGDGTNDAPALKEADV---GLSMGIQGTEVAK-ESSDIVILDDDFTSVATV 811 (825)
Q Consensus 745 P~dK~~l-V~~Lq~~g---~vVa~~GDG~NDapALk~AdV---Giamg~~gt~vAk-~aaDivlldd~f~sIv~~ 811 (825)
+.-|-.+ .+.+++.| +-+.|+||+.||..|.++|++ ++++|....+..+ ..+|.++- ++..+...
T Consensus 136 ~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~--~~~el~~~ 208 (210)
T 2ah5_A 136 APHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAH--KPLEVLAY 208 (210)
T ss_dssp CCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEES--STTHHHHH
T ss_pred CCCChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEEC--CHHHHHHH
Confidence 1122233 33344443 458999999999999999998 8888843233333 35898875 56666543
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.0003 Score=69.30 Aligned_cols=105 Identities=8% Similarity=0.036 Sum_probs=73.8
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.|++.+.++.|++.| ++.++|+.....+..+.+.+|+.... ..++.+.+.. .....
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f-----~~~~~~~~~~----------------~~Kp~ 143 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFL-----LAFFTSSALG----------------VMKPN 143 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTC-----SCEEEHHHHS----------------CCTTC
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhc-----ceEEeecccC----------------CCCCC
Confidence 46799999999999999 99999999999999999999986421 1223322221 11123
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEV 791 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~v 791 (825)
|+--..+.+.+.-..+.+.++||+.||..|.+.|++...+-..+...
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~~ 190 (200)
T 3cnh_A 144 PAMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVDAAQL 190 (200)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSCHHHH
T ss_pred HHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEECCchhh
Confidence 33333344444333456889999999999999999998876455443
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00018 Score=74.70 Aligned_cols=125 Identities=11% Similarity=0.127 Sum_probs=87.1
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.|++.++++.|++.|+++.++|+.... ...+.+.+|+.... ..++.+.+.. ...-.
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f-----~~~~~~~~~~----------------~~Kp~ 163 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHF-----DFVLTSEAAG----------------WPKPD 163 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGC-----SCEEEHHHHS----------------SCTTS
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhh-----hEEEeecccC----------------CCCCC
Confidence 35799999999999999999999987664 68888899986431 2233333221 11223
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCc-cCHHHhhhCCccEecCCCchHH-----HHHhcCeeeccCCchHHHHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGT-NDAPALKEADVGLSMGIQGTEV-----AKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~-NDapALk~AdVGiamg~~gt~v-----Ak~aaDivlldd~f~sIv~~i~ 813 (825)
|.--..+.+.+.-..+.+.|+||+. ||..|.+.|+++.+|...+... ....+|+++- ++..+..++.
T Consensus 164 ~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~--~l~el~~~l~ 236 (263)
T 3k1z_A 164 PRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILP--SLAHLLPALD 236 (263)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEES--SGGGHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeC--CHHHHHHHHH
Confidence 3333444455543446689999997 9999999999999998655321 2236888886 7888887764
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00019 Score=72.39 Aligned_cols=123 Identities=11% Similarity=0.129 Sum_probs=85.7
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.|++.++++.|++ |+++.++|+.....+..+.+.++-. ...++.+.++.. ..-.
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~~-------fd~i~~~~~~~~----------------~KP~ 154 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGVE-------FDHIITAQDVGS----------------YKPN 154 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCSC-------CSEEEEHHHHTS----------------CTTS
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCCc-------cCEEEEccccCC----------------CCCC
Confidence 678999999999999 8999999999988877776664421 223344333321 1223
Q ss_pred HHHHHHHHHHHHhC---CCEEEEEcCCc-cCHHHhhhCCccEecCCCc----------hHHHHHhcCeeeccCCchHHHH
Q 003371 745 PFDKLLMVQCLKKK---GHVVAVTGDGT-NDAPALKEADVGLSMGIQG----------TEVAKESSDIVILDDDFTSVAT 810 (825)
Q Consensus 745 P~dK~~lV~~Lq~~---g~vVa~~GDG~-NDapALk~AdVGiamg~~g----------t~vAk~aaDivlldd~f~sIv~ 810 (825)
|.-....++.+++. .+.+.++||+. ||..|.+.|+++.+|...+ .+..+..+|+++- ++..+..
T Consensus 155 ~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~--~~~el~~ 232 (240)
T 3smv_A 155 PNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFN--SMGEMAE 232 (240)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEES--SHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeC--CHHHHHH
Confidence 44434444434443 35688999996 9999999999999995322 1334578899986 7888888
Q ss_pred HHH
Q 003371 811 VLS 813 (825)
Q Consensus 811 ~i~ 813 (825)
++.
T Consensus 233 ~l~ 235 (240)
T 3smv_A 233 AHK 235 (240)
T ss_dssp HHH
T ss_pred HHH
Confidence 775
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00064 Score=69.68 Aligned_cols=118 Identities=14% Similarity=0.130 Sum_probs=80.9
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.|++.+.++.|+ .|+++.++|+.....+....+.+|+..... . +++...
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~-----~-----------------------i~~~~k 162 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFP-----R-----------------------IEVVSE 162 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCC-----C-----------------------EEEESC
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCc-----e-----------------------eeeeCC
Confidence 46799999999999 999999999999998999999888854211 0 223323
Q ss_pred H--HHHHHHHHHHHhCCCEEEEEcCCc-cCHHHhhhCCccEecCCCchH--------HHHHhcCe-eeccCCchHHHHHH
Q 003371 745 P--FDKLLMVQCLKKKGHVVAVTGDGT-NDAPALKEADVGLSMGIQGTE--------VAKESSDI-VILDDDFTSVATVL 812 (825)
Q Consensus 745 P--~dK~~lV~~Lq~~g~vVa~~GDG~-NDapALk~AdVGiamg~~gt~--------vAk~aaDi-vlldd~f~sIv~~i 812 (825)
| +--..+.+.+.-..+.++++||+. ||..|.+.|++++++=..|.. .....+|. ++- ++..+..++
T Consensus 163 p~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~~l 240 (251)
T 2pke_A 163 KDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVP--DPSGWPAAV 240 (251)
T ss_dssp CSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECS--SGGGHHHHH
T ss_pred CCHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeC--CHHHHHHHH
Confidence 3 222333344433345689999999 999999999999876433322 11235787 554 677777766
Q ss_pred H
Q 003371 813 S 813 (825)
Q Consensus 813 ~ 813 (825)
.
T Consensus 241 ~ 241 (251)
T 2pke_A 241 R 241 (251)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.0002 Score=73.35 Aligned_cols=123 Identities=14% Similarity=0.130 Sum_probs=85.9
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+.- ..++.++.... ....
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f-------~~~~~~~~~~~----------------~kp~ 175 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPW-------DMLLCADLFGH----------------YKPD 175 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCC-------SEECCHHHHTC----------------CTTS
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCc-------ceEEeeccccc----------------CCCC
Confidence 4578999999999985 9999999999999999999999841 12222222110 1112
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCC----CchH----H-HHHhcCeeeccCCchHHHHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGI----QGTE----V-AKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~----~gt~----v-Ak~aaDivlldd~f~sIv~~i~ 813 (825)
|.-=..+.+.+.-..+-+.++||+.||..|.+.|+++++|.. .|.. + .+..+|+++- ++..+..++.
T Consensus 176 ~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~--~l~el~~~l~ 251 (254)
T 3umc_A 176 PQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIAS--DLLDLHRQLA 251 (254)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEES--SHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEEC--CHHHHHHHhc
Confidence 222233344443334568999999999999999999999985 2321 1 2567899986 7888888774
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.29 E-value=0.0006 Score=67.14 Aligned_cols=139 Identities=12% Similarity=0.061 Sum_probs=91.4
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCH---HHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEE
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNV---FTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVM 740 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~---~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ 740 (825)
-++.||+.++++.|+++|+++.++|+-.. ..+..+.+.+|+.... ..++...+.... .-.
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~f-----d~i~~~~~~~~~------------~~~ 95 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYF-----DFIYASNSELQP------------GKM 95 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGE-----EEEEECCTTSST------------TCC
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhhe-----EEEEEccccccc------------cCC
Confidence 36889999999999999999999998776 8899999999996531 122222111000 000
Q ss_pred EecCHHHHHHHHHHHHhCCCEEEEEcCC-ccCHHHhhhCCccEecCCCchHH------HHHhcCeeeccCCchHHHHHHH
Q 003371 741 ARSSPFDKLLMVQCLKKKGHVVAVTGDG-TNDAPALKEADVGLSMGIQGTEV------AKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 741 ar~sP~dK~~lV~~Lq~~g~vVa~~GDG-~NDapALk~AdVGiamg~~gt~v------Ak~aaDivlldd~f~sIv~~i~ 813 (825)
..-.|+--..+.+.+.-....+.|+||+ .+|..+-++|++....=..+... ....+|.++-+.++..+..+++
T Consensus 96 ~KP~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~ 175 (189)
T 3ib6_A 96 EKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALL 175 (189)
T ss_dssp CTTSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHH
T ss_pred CCcCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHH
Confidence 1112333333444443334668999999 79999999998864432122210 1126789988889999999988
Q ss_pred HhHHhh
Q 003371 814 PGDQLH 819 (825)
Q Consensus 814 ~gR~i~ 819 (825)
..+.-+
T Consensus 176 l~~~~~ 181 (189)
T 3ib6_A 176 LLKKIS 181 (189)
T ss_dssp HHHHHC
T ss_pred HHHHhh
Confidence 776543
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0012 Score=65.74 Aligned_cols=126 Identities=19% Similarity=0.232 Sum_probs=82.8
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.|++.++++.|++.|+++.++|+-+...+..+-+.+|+... ...++.+.++.. ..-.
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~-----fd~~~~~~~~~~----------------~KP~ 142 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKY-----FDVMVFGDQVKN----------------GKPD 142 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG-----CSEEECGGGSSS----------------CTTS
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCcc-----ccccccccccCC----------------Cccc
Confidence 4579999999999999999999999999999999999999753 223333333221 1112
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc----EecCCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVG----LSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVG----iamg~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
|+-=....+.+.-.-+.+.|+||..+|..+-++|++. +.-|.+..+..+++.+.++. ++..+++.++
T Consensus 143 p~~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~--~~~eli~~l~ 213 (216)
T 3kbb_A 143 PEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALV--KPEEILNVLK 213 (216)
T ss_dssp THHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEE--CGGGHHHHHH
T ss_pred HHHHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEEC--CHHHHHHHHH
Confidence 2222233344433345688999999999999999974 44444444444555444444 3445555554
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00028 Score=71.89 Aligned_cols=121 Identities=17% Similarity=0.153 Sum_probs=85.7
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.|++.++++.|++. +++.++|+.....+..+.+.+|+.- ..++.+..... ..
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f-------~~~~~~~~~~~------------------~k 169 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPW-------DVIIGSDINRK------------------YK 169 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCC-------SCCCCHHHHTC------------------CT
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCe-------eEEEEcCcCCC------------------CC
Confidence 5679999999999997 9999999999999999999999841 11222222111 11
Q ss_pred HHHHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCccEecCCC----ch----HH-HHHhcCeeeccCCchHHHHHH
Q 003371 745 PFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVGLSMGIQ----GT----EV-AKESSDIVILDDDFTSVATVL 812 (825)
Q Consensus 745 P~dK~~lV~~Lq~~---g~vVa~~GDG~NDapALk~AdVGiamg~~----gt----~v-Ak~aaDivlldd~f~sIv~~i 812 (825)
|. ...+-..+++. .+-+.++||+.||..|.+.|+++++|... |. +. .+..+|+++- ++..+..++
T Consensus 170 p~-~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~--~~~el~~~l 246 (254)
T 3umg_A 170 PD-PQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISAT--DITDLAAQL 246 (254)
T ss_dssp TS-HHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEES--SHHHHHHHH
T ss_pred CC-HHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEEC--CHHHHHHHh
Confidence 21 11222333333 35689999999999999999999999852 21 11 3567899886 899998887
Q ss_pred HH
Q 003371 813 SP 814 (825)
Q Consensus 813 ~~ 814 (825)
..
T Consensus 247 ~~ 248 (254)
T 3umg_A 247 RA 248 (254)
T ss_dssp HH
T ss_pred cC
Confidence 54
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00022 Score=70.88 Aligned_cols=104 Identities=8% Similarity=0.030 Sum_probs=71.3
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH------cCCcccccccccceeeechhhhcCCHHHHHhhccCee
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATE------CGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIR 738 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~------~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~ 738 (825)
++.|++.+.++.|++ |+++.++|+.....+..+.+. .|+... ...++.+.+..
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~-----f~~~~~~~~~~--------------- 147 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSF-----FDKVYASCQMG--------------- 147 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGG-----SSEEEEHHHHT---------------
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHH-----cCeEEeecccC---------------
Confidence 467999999999999 999999999998888888777 676432 12223222211
Q ss_pred EEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchH
Q 003371 739 VMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTE 790 (825)
Q Consensus 739 V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~ 790 (825)
...-.|+--..+.+.+.-..+.+.++||+.||..|.+.|+++..|...+.+
T Consensus 148 -~~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~~ 198 (211)
T 2i6x_A 148 -KYKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNGEN 198 (211)
T ss_dssp -CCTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCC
T ss_pred -CCCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCHHH
Confidence 011123233334444433345688999999999999999999998855443
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00017 Score=66.35 Aligned_cols=97 Identities=11% Similarity=0.011 Sum_probs=65.2
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+.. ...-.
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f-----~~i~~~~~~~----------------~~Kp~ 76 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVV-----DKVLLSGELG----------------VEKPE 76 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSS-----SEEEEHHHHS----------------CCTTS
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhc-----cEEEEeccCC----------------CCCCC
Confidence 46799999999999999999999999988888888888875421 1222222111 01112
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGL 782 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGi 782 (825)
|+--..+.+.+.-..+.+.|+||+.+|..+.++|++-.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~ 114 (137)
T 2pr7_A 77 EAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVG 114 (137)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEE
Confidence 22222233333222345889999999999999998743
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.93 E-value=0.00018 Score=71.23 Aligned_cols=106 Identities=10% Similarity=0.081 Sum_probs=67.1
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-cCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATE-CGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~-~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
++.|++.+.++.|++.|+++.++|+.....+..+... .|+... ...++.+.+.. ...-
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~-----f~~~~~~~~~~----------------~~Kp 149 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDA-----ADHIYLSQDLG----------------MRKP 149 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHH-----CSEEEEHHHHT----------------CCTT
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhh-----eeeEEEecccC----------------CCCC
Confidence 4679999999999999999999999765554443333 343221 11122222111 0111
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHH
Q 003371 744 SPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEV 791 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~v 791 (825)
.|+--..+.+.+.-..+.+.++||+.||..|.+.|++...+...+.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~~ 197 (206)
T 2b0c_A 150 EARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTTI 197 (206)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTTHH
T ss_pred CHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCCchH
Confidence 233333444444434456889999999999999999998887555543
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0014 Score=67.57 Aligned_cols=51 Identities=20% Similarity=0.281 Sum_probs=38.2
Q ss_pred HHHHHHHHHhCCCEEEEEcC----CccCHHHhhhCC-ccEecCCCchHHHHHhcCee
Q 003371 748 KLLMVQCLKKKGHVVAVTGD----GTNDAPALKEAD-VGLSMGIQGTEVAKESSDIV 799 (825)
Q Consensus 748 K~~lV~~Lq~~g~vVa~~GD----G~NDapALk~Ad-VGiamg~~gt~vAk~aaDiv 799 (825)
|..-++.|.+.-+-|+++|| |.||.+||+.|. +|++|+ ++.|..|...++.
T Consensus 188 Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~-n~~~~~~~~~~~~ 243 (246)
T 3f9r_A 188 KTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVT-SYKDTIAEVEKII 243 (246)
T ss_dssp GGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECS-SHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeC-CHHHHHHHHHHHh
Confidence 44334333333356899999 799999999996 899999 8888888766654
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0005 Score=69.36 Aligned_cols=137 Identities=12% Similarity=-0.001 Sum_probs=74.9
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCcccccccccceeeechhhhcCCHH
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNV---------------FTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDE 728 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~---------------~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~ 728 (825)
.++.|++.++++.|+++|+++.++|+... ..+..+.+++|+.-.. ......+.. ..+.
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~----~~~~~~~~~-g~~~-- 127 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDM----VLACAYHEA-GVGP-- 127 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSE----EEEECCCTT-CCST--
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCceee----EEEeecCCC-Ccee--
Confidence 46789999999999999999999999887 6778888888874110 000000000 0000
Q ss_pred HHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE-ec---CCCchHHHHHhcCeeeccCC
Q 003371 729 ERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGL-SM---GIQGTEVAKESSDIVILDDD 804 (825)
Q Consensus 729 ~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGi-am---g~~gt~vAk~aaDivlldd~ 804 (825)
+ ..... ....-.|.-=..+.+.+.-..+.++|+||+.||..+.+.|++.. .+ |....+.....+|.++- +
T Consensus 128 ~---~~~~~-~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~--~ 201 (218)
T 2o2x_A 128 L---AIPDH-PMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSS--E 201 (218)
T ss_dssp T---CCSSC-TTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHH--H
T ss_pred e---cccCC-ccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecc--c
Confidence 0 00000 00001111111122222222346889999999999999999764 22 31111111123555543 5
Q ss_pred chHHHHHHH
Q 003371 805 FTSVATVLS 813 (825)
Q Consensus 805 f~sIv~~i~ 813 (825)
+..+..++.
T Consensus 202 l~el~~~l~ 210 (218)
T 2o2x_A 202 LGDLLAAIE 210 (218)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666666654
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0024 Score=63.93 Aligned_cols=119 Identities=16% Similarity=0.170 Sum_probs=76.2
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.|++.++++.|++. +++.++|+.... -+.+|+... ...++.+.+... ..-.
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~-----f~~~~~~~~~~~----------------~kp~ 157 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADY-----FAFALCAEDLGI----------------GKPD 157 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGG-----CSEEEEHHHHTC----------------CTTS
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHH-----eeeeEEccccCC----------------CCcC
Confidence 4679999999999998 999999987754 244555432 112222222110 1122
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCc-cCHHHhhhCCccEec---CCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGT-NDAPALKEADVGLSM---GIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~-NDapALk~AdVGiam---g~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
|+--..+.+.+.-....+.|+||+. ||..|.+.|+++.++ |....+. +..+|+++- ++..+..++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~~--~l~el~~~l~ 227 (230)
T 3vay_A 158 PAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEIH--NLSQLPEVLA 227 (230)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEES--SGGGHHHHHH
T ss_pred HHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeEC--CHHHHHHHHH
Confidence 3222334444433345688999997 999999999998877 2222222 567888886 7888887764
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0042 Score=64.32 Aligned_cols=125 Identities=13% Similarity=0.141 Sum_probs=83.5
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.++++.|++ ++++.++|+.....+..+.+.+|+.... ..++.+.+... ..-.
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f-----~~i~~~~~~~~----------------~KP~ 178 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYF-----DAIVIGGEQKE----------------EKPA 178 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGC-----SEEEEGGGSSS----------------CTTC
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhh-----heEEecCCCCC----------------CCCC
Confidence 577999999999998 6999999999999999999999986531 22333332210 1112
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCC-ccCHHHhhhCCc--cEecCCCchH--HHHHhcCeeeccCCchHHHHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDG-TNDAPALKEADV--GLSMGIQGTE--VAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG-~NDapALk~AdV--Giamg~~gt~--vAk~aaDivlldd~f~sIv~~i~ 813 (825)
|+-=..+.+.+.-....+.|+||. .||..+-+.|++ .+.++..+.. .....+|.++. ++..+..++.
T Consensus 179 p~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~--~~~el~~~l~ 250 (260)
T 2gfh_A 179 PSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELPALLQ 250 (260)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHHHHHH
T ss_pred HHHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEEC--CHHHHHHHHH
Confidence 332233334443334568899994 999999999999 5777532221 12335788775 6777777664
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0018 Score=65.30 Aligned_cols=104 Identities=9% Similarity=-0.001 Sum_probs=70.4
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH------HHcCCcccccccccceeeechhhhcCCHHHHHhhccCee
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIA------TECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIR 738 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA------~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~ 738 (825)
++.|++.++++.|++. +++.++|+.....+..+. +..|+... ...++.+.+..
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~-----fd~i~~~~~~~--------------- 170 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDY-----FEKTYLSYEMK--------------- 170 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHH-----CSEEEEHHHHT---------------
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHh-----CCEEEeecccC---------------
Confidence 4679999999999999 999999999999888776 44555331 11222222221
Q ss_pred EEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchH
Q 003371 739 VMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTE 790 (825)
Q Consensus 739 V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~ 790 (825)
...-.|+-=..+.+.+.-..+.+.++||+.||..|.+.|+++..+...+.+
T Consensus 171 -~~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~ 221 (229)
T 4dcc_A 171 -MAKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGED 221 (229)
T ss_dssp -CCTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCC
T ss_pred -CCCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHHH
Confidence 112223333344444443446688999999999999999999988754433
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0067 Score=66.64 Aligned_cols=136 Identities=18% Similarity=0.246 Sum_probs=84.7
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.++++.|+++|+++.++|+-....+..+-+..|+..... ...++.+.+...- .+..+...-...-.
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd---~~~Ivs~ddv~~~-----~~~~~~~kp~~KP~ 286 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFE---ADFIATASDVLEA-----ENMYPQARPLGKPN 286 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSC---GGGEECHHHHHHH-----HHHSTTSCCCCTTS
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcC---CCEEEeccccccc-----ccccccccCCCCCC
Confidence 678999999999999999999999999999999999999865311 0134444433210 00000000001111
Q ss_pred HHHHHHHHHHHHhC-----------------CCEEEEEcCCccCHHHhhhCCccE-ec--CCCc----hHHHHHhcCeee
Q 003371 745 PFDKLLMVQCLKKK-----------------GHVVAVTGDGTNDAPALKEADVGL-SM--GIQG----TEVAKESSDIVI 800 (825)
Q Consensus 745 P~dK~~lV~~Lq~~-----------------g~vVa~~GDG~NDapALk~AdVGi-am--g~~g----t~vAk~aaDivl 800 (825)
|+- +...+++. ...+.|+||+.+|..|-++|++.. .+ |..+ .+.....+|.++
T Consensus 287 P~~---~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi 363 (384)
T 1qyi_A 287 PFS---YIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI 363 (384)
T ss_dssp THH---HHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEE
T ss_pred HHH---HHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEE
Confidence 211 22233332 256889999999999999998652 22 3111 123334689888
Q ss_pred ccCCchHHHHHHH
Q 003371 801 LDDDFTSVATVLS 813 (825)
Q Consensus 801 ldd~f~sIv~~i~ 813 (825)
- ++..+..+++
T Consensus 364 ~--sl~eL~~~l~ 374 (384)
T 1qyi_A 364 N--HLGELRGVLD 374 (384)
T ss_dssp S--SGGGHHHHHS
T ss_pred C--CHHHHHHHHH
Confidence 6 6888877664
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0035 Score=64.98 Aligned_cols=43 Identities=12% Similarity=0.057 Sum_probs=36.0
Q ss_pred cCCCcccHHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCCc
Q 003371 663 KDPCRPGVQKAVEACQSAGVEIKMITG---DNVFTAKAIATECGIL 705 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI~V~mvTG---D~~~tA~aIA~~~GI~ 705 (825)
.+.+-|+++++|++++++|++|.++|| ..........+++|+.
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~ 67 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE 67 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence 344568899999999999999999999 6777777777888875
|
| >2l1w_B Vacuolar calcium ATPase BCA1 peptide; calmodulin, calmodulin complex, soybean calmodulin, vacuolar ATPase, metal binding protein; NMR {Glycine max} | Back alignment and structure |
|---|
Probab=96.33 E-value=0.00073 Score=43.18 Aligned_cols=22 Identities=23% Similarity=0.338 Sum_probs=19.5
Q ss_pred HHHhHHHhh-hhhccchhhhhcc
Q 003371 26 AQKRWRLAY-WTIYSFRAMLSVL 47 (825)
Q Consensus 26 ~~~~~~~~~-~~~~~~~~~~~~~ 47 (825)
+++|||+|+ +++|+.|||++++
T Consensus 1 al~rWR~a~~~v~n~~rrfr~~~ 23 (26)
T 2l1w_B 1 ARQRWRSSVSIVKNRARRFRMIS 23 (26)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CchhHHHHHHHHhCccccccccc
Confidence 378999998 8899999999875
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0026 Score=65.74 Aligned_cols=85 Identities=12% Similarity=0.171 Sum_probs=66.0
Q ss_pred cCCCcccHHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCee
Q 003371 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNV----FTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIR 738 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI~V~mvTGD~~----~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~ 738 (825)
..|+.|++.+.++.|+++|+++.++||-.. ..+..-.+++||...... .
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~---------------------------~ 151 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDK---------------------------T 151 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTT---------------------------T
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccc---------------------------e
Confidence 468889999999999999999999999864 477777788999642100 0
Q ss_pred EEEecCHHHHHHHHHHHHhC-CCEEEEEcCCccCHHH
Q 003371 739 VMARSSPFDKLLMVQCLKKK-GHVVAVTGDGTNDAPA 774 (825)
Q Consensus 739 V~ar~sP~dK~~lV~~Lq~~-g~vVa~~GDG~NDapA 774 (825)
++-|....+|....+.|.+. -.+|+++||-.+|.++
T Consensus 152 Lilr~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 152 LLLKKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp EEEESSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred eEecCCCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 34443446788888888874 5678999999999986
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0015 Score=67.83 Aligned_cols=57 Identities=19% Similarity=0.330 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHh-CCCEEEEEcC----CccCHHHhhhCC-ccEecCCCchHHHHHhcCeeeccC
Q 003371 746 FDKLLMVQCLKK-KGHVVAVTGD----GTNDAPALKEAD-VGLSMGIQGTEVAKESSDIVILDD 803 (825)
Q Consensus 746 ~dK~~lV~~Lq~-~g~vVa~~GD----G~NDapALk~Ad-VGiamg~~gt~vAk~aaDivlldd 803 (825)
-+|..-++.|.. ..+-|+++|| |.||.+||+.|+ +|++|| ++.+..|+.||+|..+.
T Consensus 196 vsKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~-NA~~~~k~~a~~v~~~~ 258 (262)
T 2fue_A 196 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFFPET 258 (262)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHCTTC
T ss_pred CCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec-CCCHHHHHhhheeCCCC
Confidence 468888888811 1467899999 999999999999 599998 89999999999987644
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=96.08 E-value=0.064 Score=52.50 Aligned_cols=53 Identities=13% Similarity=0.197 Sum_probs=34.8
Q ss_pred EEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeE
Q 003371 576 IHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLT 655 (825)
Q Consensus 576 ~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~ 655 (825)
.+.-|..+.+.+..- .+++ .+...+.++..+|..++.+|. |-.
T Consensus 133 ~v~iGn~~~m~~~gi----------~i~~----~~~~~~~~~~~~G~T~V~vai-----------------------dg~ 175 (185)
T 2kmv_A 133 KVLIGNREWMIRNGL----------VINN----DVNDFMTEHERKGRTAVLVAV-----------------------DDE 175 (185)
T ss_dssp EEEEECHHHHHHHTC----------CCCH----HHHHHHHHHHHTTCEEEEEEE-----------------------TTE
T ss_pred EEEECCHHHHHHcCC----------CCCH----HHHHHHHHHHhCCCeEEEEEE-----------------------CCE
Confidence 345688888754221 1222 234456677788988888886 335
Q ss_pred EeeeecccCC
Q 003371 656 LLGIVGIKDP 665 (825)
Q Consensus 656 llG~v~i~Dp 665 (825)
++|++++.|+
T Consensus 176 l~g~iavaD~ 185 (185)
T 2kmv_A 176 LCGLIAIADT 185 (185)
T ss_dssp EEEEEEEECC
T ss_pred EEEEEEEEcC
Confidence 8999999995
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.07 E-value=0.012 Score=58.23 Aligned_cols=118 Identities=14% Similarity=0.056 Sum_probs=73.5
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.++++.|+++|+++.++||-....+..++. .. ...++.+.+. .+..
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~~-------~d~v~~~~~~------------------~~~K 87 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---PV-------NDWMIAAPRP------------------TAGW 87 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---TT-------TTTCEECCCC------------------SSCT
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---cc-------CCEEEECCcC------------------CCCC
Confidence 567999999999999999999999998877755443 11 0111211111 0112
Q ss_pred HHHHHHHHHHHHhCC----CEEEEEcCCccCHHHhhhCCc---cEecCCCc------------------------hHHHH
Q 003371 745 PFDKLLMVQCLKKKG----HVVAVTGDGTNDAPALKEADV---GLSMGIQG------------------------TEVAK 793 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g----~vVa~~GDG~NDapALk~AdV---Giamg~~g------------------------t~vAk 793 (825)
|. ...+.+.+++.| +.+.|+||..+|..+-+.|++ ++.-|... .+...
T Consensus 88 P~-p~~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~ 166 (196)
T 2oda_A 88 PQ-PDACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYS 166 (196)
T ss_dssp TS-THHHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CC-hHHHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHH
Confidence 21 123444444432 458899999999999999986 33333110 01112
Q ss_pred HhcCeeeccCCchHHHHHHH
Q 003371 794 ESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 794 ~aaDivlldd~f~sIv~~i~ 813 (825)
..+|.++- ++..+..++.
T Consensus 167 ~~~d~vi~--~~~eL~~~l~ 184 (196)
T 2oda_A 167 LGVHSVID--HLGELESCLA 184 (196)
T ss_dssp TTCSEEES--SGGGHHHHHH
T ss_pred cCCCEEeC--CHHHHHHHHH
Confidence 35888874 7888877664
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=95.97 E-value=0.0035 Score=64.88 Aligned_cols=85 Identities=13% Similarity=0.109 Sum_probs=64.7
Q ss_pred cCCCcccHHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCee
Q 003371 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNV----FTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIR 738 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI~V~mvTGD~~----~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~ 738 (825)
.+++.||+.+.++.|+++|+++.++||-.. ..+..-.+++||..-.. ..
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~---~~------------------------ 151 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEE---SA------------------------ 151 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSG---GG------------------------
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccc---cc------------------------
Confidence 478889999999999999999999998854 46777778899964110 01
Q ss_pred EEEecCHHHHHHHHHHHHhC-CCEEEEEcCCccCHHH
Q 003371 739 VMARSSPFDKLLMVQCLKKK-GHVVAVTGDGTNDAPA 774 (825)
Q Consensus 739 V~ar~sP~dK~~lV~~Lq~~-g~vVa~~GDG~NDapA 774 (825)
++-|..-.+|....+.|.+. -.+|+++||-.+|.++
T Consensus 152 Lilr~~~~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 152 FYLKKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp EEEESSCSCCHHHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred eeccCCCCChHHHHHHHHhcCCCEEEEECCChHHhcc
Confidence 33343345677788888777 4578999999999885
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=95.94 E-value=0.0022 Score=65.88 Aligned_cols=52 Identities=17% Similarity=0.268 Sum_probs=42.0
Q ss_pred HHHHHHHHHHh-CCCEEEEEcC----CccCHHHhhhCCc-cEecCCCchHHHHHhcCee
Q 003371 747 DKLLMVQCLKK-KGHVVAVTGD----GTNDAPALKEADV-GLSMGIQGTEVAKESSDIV 799 (825)
Q Consensus 747 dK~~lV~~Lq~-~g~vVa~~GD----G~NDapALk~AdV-Giamg~~gt~vAk~aaDiv 799 (825)
+|..-++.|.. ..+-|+++|| |.||.+||+.|+. |++|| ++.+..|+.||+|
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~-Na~~~vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APEDTRRICELLF 245 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHHHHHHHHHHC
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEee-CCCHHHHHHHhhc
Confidence 67777777711 2467999999 9999999999987 99999 8999999999987
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=95.75 E-value=0.018 Score=59.42 Aligned_cols=42 Identities=12% Similarity=0.003 Sum_probs=35.3
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCCcc
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITG---DNVFTAKAIATECGILR 706 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTG---D~~~tA~aIA~~~GI~~ 706 (825)
.+-|+++++|++++++|++|+++|| ..........+++|+..
T Consensus 22 ~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~ 66 (266)
T 3pdw_A 22 EKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPA 66 (266)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCC
T ss_pred EeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 3457899999999999999999988 67777777788888853
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=95.43 E-value=0.017 Score=58.14 Aligned_cols=116 Identities=11% Similarity=0.098 Sum_probs=73.8
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
-++.||+.+.++.|++.| ++.++|+-....+..+.+.+|+..... .+.....
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f~--------------------------~~~~~~~- 146 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEVE--------------------------GRVLIYI- 146 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHTT--------------------------TCEEEES-
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhcC--------------------------eeEEecC-
Confidence 367899999999999999 999999999999999999999853210 0001111
Q ss_pred CHHHHHHHHHHHHh--CCCEEEEEcCCcc---CHHHhhhCCc---cEecCCC--chHHHHHh--cCeeeccCCchHHHHH
Q 003371 744 SPFDKLLMVQCLKK--KGHVVAVTGDGTN---DAPALKEADV---GLSMGIQ--GTEVAKES--SDIVILDDDFTSVATV 811 (825)
Q Consensus 744 sP~dK~~lV~~Lq~--~g~vVa~~GDG~N---DapALk~AdV---Giamg~~--gt~vAk~a--aDivlldd~f~sIv~~ 811 (825)
.|..+.+.+.+ ..+.+.|+||+.| |..+-+.|++ ++.-|.. ..+..++. +|.++- ++..+..+
T Consensus 147 ---~K~~~~~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~--~~~el~~~ 221 (231)
T 2p11_A 147 ---HKELMLDQVMECYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVE--RIGDLVEM 221 (231)
T ss_dssp ---SGGGCHHHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEES--SGGGGGGC
T ss_pred ---ChHHHHHHHHhcCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeec--CHHHHHHH
Confidence 12223333332 3467999999999 5555566764 3433311 22223333 888875 56666544
Q ss_pred H
Q 003371 812 L 812 (825)
Q Consensus 812 i 812 (825)
+
T Consensus 222 l 222 (231)
T 2p11_A 222 D 222 (231)
T ss_dssp G
T ss_pred H
Confidence 3
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=95.35 E-value=0.022 Score=58.34 Aligned_cols=117 Identities=14% Similarity=0.227 Sum_probs=76.1
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
.++.|++.+.++.|++.|+++.+.|+-. .+..+-+.+|+... ...++.+.+... ..-
T Consensus 115 ~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~-----Fd~i~~~~~~~~----------------~KP 171 (250)
T 4gib_A 115 NDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDK-----FDFIADAGKCKN----------------NKP 171 (250)
T ss_dssp GGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGG-----CSEECCGGGCCS----------------CTT
T ss_pred cccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccc-----cceeecccccCC----------------CCC
Confidence 3578999999999999999988776543 45677888998754 233444443321 112
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc-cEecCCCchHHHHHhcCeeeccCCchHH
Q 003371 744 SPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADV-GLSMGIQGTEVAKESSDIVILDDDFTSV 808 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdV-Giamg~~gt~vAk~aaDivlldd~f~sI 808 (825)
.|+-=....+.|.-..+.+.|+||..+|..|-++|++ .|+++ +..+. ..||+++- ++..+
T Consensus 172 ~p~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~-~~~~~--~~ad~vi~--~l~eL 232 (250)
T 4gib_A 172 HPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVG-NYENL--KKANLVVD--STNQL 232 (250)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEES-CTTTT--TTSSEEES--SGGGC
T ss_pred cHHHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEEC-ChhHh--ccCCEEEC--ChHhC
Confidence 2333333444443334568899999999999999987 44554 22222 35899875 45544
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=94.91 E-value=0.015 Score=58.00 Aligned_cols=120 Identities=12% Similarity=0.063 Sum_probs=70.3
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.|++.+.++.|+++|+++.++|+... .+..+.+.+|+.... ..++.+.+. ....
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f-----~~~~~~~~~------------------~~~K 150 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYF-----DALALSYEI------------------KAVK 150 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGC-----SEEC---------------------------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHe-----eEEEecccc------------------CCCC
Confidence 4679999999999999999999999866 478888899986421 122222211 1112
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCcc-CHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTN-DAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~N-DapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
|.- ..+-..+++.|-.-.|+||+.+ |..+-+.|++....-..+... .+ .+.++ +++..+...+.
T Consensus 151 p~~-~~~~~~~~~~~~~~~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~-~~-~~~~i--~~l~el~~~l~ 215 (220)
T 2zg6_A 151 PNP-KIFGFALAKVGYPAVHVGDIYELDYIGAKRSYVDPILLDRYDFY-PD-VRDRV--KNLREALQKIE 215 (220)
T ss_dssp --C-CHHHHHHHHHCSSEEEEESSCCCCCCCSSSCSEEEEEBCTTSCC-TT-CCSCB--SSHHHHHHHHH
T ss_pred CCH-HHHHHHHHHcCCCeEEEcCCchHhHHHHHHCCCeEEEECCCCCC-CC-cceEE--CCHHHHHHHHH
Confidence 211 1222333333322289999999 999999998865432122110 01 13333 36777766653
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=94.81 E-value=0.029 Score=60.17 Aligned_cols=124 Identities=12% Similarity=0.084 Sum_probs=73.6
Q ss_pred cCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc----CCcccccccccceeeech-hhhcCCH-HHHHh----
Q 003371 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATEC----GILRLDQQVEKGEVVEGV-EFRNYTD-EERIQ---- 732 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~----GI~~~~~~~~~~~vi~G~-~~~~~~~-~~~~~---- 732 (825)
...+.|+.++.++.++++|++|++|||-....++.+|..+ ||...+..- ....++.. .-..... .+..+
T Consensus 141 ~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~ViG-~~~~~~~~~~~~~~~~~~~~~dg~y~ 219 (327)
T 4as2_A 141 PPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIG-VTTLLKNRKTGELTTARKQIAEGKYD 219 (327)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGGEEE-ECEEEECTTTCCEECHHHHHHTTCCC
T ss_pred ccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHHeEe-eeeeeecccccccccccccccccccc
Confidence 3457899999999999999999999999999999999985 665432100 00111110 0000000 01000
Q ss_pred --hccCeeEEEe-----cCHHHHHHHHHHHHhC-CCEEEEEcCC-ccCHHHhhh--CCccEecCCC
Q 003371 733 --KVDKIRVMAR-----SSPFDKLLMVQCLKKK-GHVVAVTGDG-TNDAPALKE--ADVGLSMGIQ 787 (825)
Q Consensus 733 --~~~~~~V~ar-----~sP~dK~~lV~~Lq~~-g~vVa~~GDG-~NDapALk~--AdVGiamg~~ 787 (825)
......+-.+ +--+-|..-|+..... ...+++.||+ ..|.+||.. ++.|+.+-++
T Consensus 220 ~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L~in 285 (327)
T 4as2_A 220 PKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHLWVN 285 (327)
T ss_dssp GGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEEEEC
T ss_pred ccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEEEEe
Confidence 0111112222 1235687777765533 3568899999 579999965 5566655443
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=94.55 E-value=0.048 Score=57.44 Aligned_cols=96 Identities=16% Similarity=0.045 Sum_probs=66.4
Q ss_pred ccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHH---HHHHHH--------cCCcccccccccceeeechhhhcCCHHHH
Q 003371 662 IKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTA---KAIATE--------CGILRLDQQVEKGEVVEGVEFRNYTDEER 730 (825)
Q Consensus 662 i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA---~aIA~~--------~GI~~~~~~~~~~~vi~G~~~~~~~~~~~ 730 (825)
.++++.||+.++++.|+++|+++.++||-....+ ..+-+. .|+. . ..++.+.+..
T Consensus 185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~-~------~~~~~~~~~~------- 250 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP-L------VMQCQREQGD------- 250 (301)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC-C------SEEEECCTTC-------
T ss_pred cccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCC-c------hheeeccCCC-------
Confidence 3678899999999999999999999999875433 333334 6872 1 1122111111
Q ss_pred HhhccCeeEEEecCHHHHHHHHHHHHhCC-CEEEEEcCCccCHHHhhhCCcc
Q 003371 731 IQKVDKIRVMARSSPFDKLLMVQCLKKKG-HVVAVTGDGTNDAPALKEADVG 781 (825)
Q Consensus 731 ~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g-~vVa~~GDG~NDapALk~AdVG 781 (825)
.+-.|+-|..+.+.+.... +.+.|+||..+|..|-++|++-
T Consensus 251 ----------~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~ 292 (301)
T 1ltq_A 251 ----------TRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 292 (301)
T ss_dssp ----------CSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred ----------CcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCe
Confidence 1234677777777774443 3467899999999999999875
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=94.42 E-value=0.025 Score=58.66 Aligned_cols=42 Identities=19% Similarity=0.205 Sum_probs=34.3
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCH---HHHHHHHHHcCCc
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNV---FTAKAIATECGIL 705 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~---~tA~aIA~~~GI~ 705 (825)
.++.|++.++++.|++.|+++.++||-.. ......-+.+||.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 46779999999999999999999999883 3444555677886
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=94.38 E-value=0.003 Score=63.87 Aligned_cols=43 Identities=14% Similarity=0.138 Sum_probs=31.0
Q ss_pred CCEEEEEcCC-ccCHHHhhhCCcc---EecCCCchHHHH---HhcCeeec
Q 003371 759 GHVVAVTGDG-TNDAPALKEADVG---LSMGIQGTEVAK---ESSDIVIL 801 (825)
Q Consensus 759 g~vVa~~GDG-~NDapALk~AdVG---iamg~~gt~vAk---~aaDivll 801 (825)
.+.++++||+ .||..|++.|+++ +++|....+..+ ..+|.++-
T Consensus 193 ~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~ 242 (250)
T 2c4n_A 193 SEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYP 242 (250)
T ss_dssp GGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEES
T ss_pred cceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEEC
Confidence 3568999999 6999999999988 455633323333 36888875
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.24 E-value=0.14 Score=52.11 Aligned_cols=40 Identities=13% Similarity=0.121 Sum_probs=35.8
Q ss_pred CcccHHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCc
Q 003371 666 CRPGVQKAVEACQSAGVEIKMIT---GDNVFTAKAIATECGIL 705 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvT---GD~~~tA~aIA~~~GI~ 705 (825)
+-++..++++.+++.|+++.++| |..........+++|+.
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 55888999999999999999999 99999888888888874
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=94.03 E-value=0.021 Score=55.25 Aligned_cols=93 Identities=20% Similarity=0.159 Sum_probs=59.8
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHcCCcccccccccceeeec----hhhhcC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGD---------------NVFTAKAIATECGILRLDQQVEKGEVVEG----VEFRNY 725 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD---------------~~~tA~aIA~~~GI~~~~~~~~~~~vi~G----~~~~~~ 725 (825)
++.|++.++++.|++.|+++.++|+- ....+..+.+.+|+. . ..+++.+ .+...
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-f-----d~v~~s~~~~~~~~~~- 114 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ-F-----DEVLICPHLPADECDC- 114 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC-E-----EEEEEECCCGGGCCSS-
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC-e-----eEEEEcCCCCcccccc-
Confidence 57899999999999999999999997 466788888899985 1 1122221 11100
Q ss_pred CHHHHHhhccCeeEEEecCHHHH--HHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc
Q 003371 726 TDEERIQKVDKIRVMARSSPFDK--LLMVQCLKKKGHVVAVTGDGTNDAPALKEADVG 781 (825)
Q Consensus 726 ~~~~~~~~~~~~~V~ar~sP~dK--~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVG 781 (825)
..|.-. ..+.+.+.-..+.+.|+||..+|..+-+.|++-
T Consensus 115 -----------------~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~ 155 (176)
T 2fpr_A 115 -----------------RKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGIN 155 (176)
T ss_dssp -----------------STTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSE
T ss_pred -----------------cCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCe
Confidence 011100 011122221234578999999999999999875
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=93.90 E-value=0.12 Score=53.19 Aligned_cols=42 Identities=14% Similarity=0.107 Sum_probs=37.4
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCc
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMIT---GDNVFTAKAIATECGIL 705 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvT---GD~~~tA~aIA~~~GI~ 705 (825)
.++-|++.++++.+++.|+++.++| |..........+++|+.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 5567899999999999999999999 88888888888888874
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=93.65 E-value=0.068 Score=55.05 Aligned_cols=42 Identities=12% Similarity=0.196 Sum_probs=37.1
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCcc
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMIT---GDNVFTAKAIATECGILR 706 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvT---GD~~~tA~aIA~~~GI~~ 706 (825)
.++ |+++++|++++++|++|+++| |..........+++|+..
T Consensus 21 ~~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~ 65 (264)
T 3epr_A 21 SRI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVET 65 (264)
T ss_dssp EEC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCC
T ss_pred EEC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 355 899999999999999999999 888888888888999854
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=93.58 E-value=0.15 Score=52.57 Aligned_cols=115 Identities=17% Similarity=0.151 Sum_probs=72.1
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc---CCcccccccccceeeechhhhcCCHHHHHhhccCeeEE
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATEC---GILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVM 740 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~---GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ 740 (825)
-++.||+.++++.|+++|+++.++|.-+...+..+-+.+ |+.... ..++.+ +..
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~f-----d~i~~~-~~~----------------- 185 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELV-----DGHFDT-KIG----------------- 185 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGC-----SEEECG-GGC-----------------
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhc-----cEEEec-CCC-----------------
Confidence 468899999999999999999999999988888776644 464321 122222 211
Q ss_pred EecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE-ecCCCch---HHHHHhcCeeec
Q 003371 741 ARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGL-SMGIQGT---EVAKESSDIVIL 801 (825)
Q Consensus 741 ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGi-amg~~gt---~vAk~aaDivll 801 (825)
..-.|+-=..+.+.+.-..+.+.|+||..+|..+-++|++-. .+...+. +.....+|.++-
T Consensus 186 ~KP~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~ 250 (261)
T 1yns_A 186 HKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 250 (261)
T ss_dssp CTTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred CCCCHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEEC
Confidence 111222222333444333456899999999999999998742 3321121 222345677764
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=93.13 E-value=0.17 Score=51.28 Aligned_cols=93 Identities=11% Similarity=0.134 Sum_probs=62.8
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.|++.+.++.|++.|+++.++|... .+..+-+.+|+... ...++.+.+.... .-.
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~--~~~~~l~~~gl~~~-----fd~i~~~~~~~~~----------------KP~ 151 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSL--NAPTILAALELREF-----FTFCADASQLKNS----------------KPD 151 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCT--THHHHHHHTTCGGG-----CSEECCGGGCSSC----------------TTS
T ss_pred cccccHHHHHHhhhcccccceeccccc--chhhhhhhhhhccc-----cccccccccccCC----------------CCc
Confidence 567999999999999999999999754 35667788898653 2234444433211 112
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADV 780 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdV 780 (825)
|+-=....+.|.-..+.+.|+||..+|..|-++|++
T Consensus 152 p~~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~ 187 (243)
T 4g9b_A 152 PEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGM 187 (243)
T ss_dssp THHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCC
Confidence 222222333333334568899999999999999985
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=89.92 E-value=0.073 Score=53.15 Aligned_cols=88 Identities=17% Similarity=0.193 Sum_probs=54.8
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH----cCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEE
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATE----CGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMA 741 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~----~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~a 741 (825)
+.|++.+.++.|+++|+++.++|+-....+..+.+. .+.+.. |.. ...+.
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~~-----------~~~---------------~~~~~ 142 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPAT-----------NMN---------------PVIFA 142 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTT-----------TBC---------------CCEEC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCcccc-----------ccc---------------hhhhc
Confidence 467999999999999999999999875433333332 222100 000 00111
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc
Q 003371 742 RSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVG 781 (825)
Q Consensus 742 r~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVG 781 (825)
...|. ...+.+.+++.|- +.|+||..+|..+-+.|++-
T Consensus 143 ~~KP~-p~~~~~~~~~~g~-~l~VGDs~~Di~aA~~aG~~ 180 (211)
T 2b82_A 143 GDKPG-QNTKSQWLQDKNI-RIFYGDSDNDITAARDVGAR 180 (211)
T ss_dssp CCCTT-CCCSHHHHHHTTE-EEEEESSHHHHHHHHHTTCE
T ss_pred CCCCC-HHHHHHHHHHCCC-EEEEECCHHHHHHHHHCCCe
Confidence 12221 1123444555554 99999999999999999874
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=89.63 E-value=1.9 Score=43.33 Aligned_cols=44 Identities=16% Similarity=0.223 Sum_probs=32.1
Q ss_pred cCCCcccHHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCcc
Q 003371 663 KDPCRPGVQKAVEACQSAGVEIKMIT---GDNVFTAKAIATECGILR 706 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI~V~mvT---GD~~~tA~aIA~~~GI~~ 706 (825)
.++.-+++.++++.+++.|+++.++| |-........-+++|+..
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~ 67 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEI 67 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCc
Confidence 45555789999999999999999999 666655555556677643
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=87.54 E-value=0.33 Score=54.77 Aligned_cols=100 Identities=11% Similarity=0.098 Sum_probs=60.9
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCC---CHHHHHHHHH-HcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEE
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGD---NVFTAKAIAT-ECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVM 740 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD---~~~tA~aIA~-~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ 740 (825)
++.||+.++++.|+++|+++.++|+- .......+.. ..|+... ...++.+.++..-
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~-----fd~i~~~~~~~~~--------------- 159 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMH-----FDFLIESCQVGMV--------------- 159 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTT-----SSEEEEHHHHTCC---------------
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhh-----eeEEEeccccCCC---------------
Confidence 57899999999999999999999995 1111111111 1244322 2234444443321
Q ss_pred EecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecC
Q 003371 741 ARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMG 785 (825)
Q Consensus 741 ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg 785 (825)
.-.|+-=..+.+.+.-..+.+.|+||..||..+.+.|++....-
T Consensus 160 -KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~ 203 (555)
T 3i28_A 160 -KPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV 203 (555)
T ss_dssp -TTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred -CCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEE
Confidence 11232223333444333456788899999999999999876543
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=87.02 E-value=3.4 Score=39.20 Aligned_cols=32 Identities=19% Similarity=0.278 Sum_probs=23.6
Q ss_pred HHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccC
Q 003371 610 MENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKD 664 (825)
Q Consensus 610 ~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~D 664 (825)
+...+..+..+|..++.+|. |-.++|++++.|
T Consensus 134 ~~~~~~~~~~~G~T~v~va~-----------------------dg~~~g~i~l~D 165 (165)
T 2arf_A 134 VSDAMTDHEMKGQTAILVAI-----------------------DGVLCGMIAIAD 165 (165)
T ss_dssp HHHHHHHHHTTTSEEEEEEE-----------------------TTEEEEEEEECC
T ss_pred HHHHHHHHHhCCCeEEEEEE-----------------------CCEEEEEEEEEC
Confidence 34455667778888888886 335899999987
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=86.84 E-value=0.18 Score=52.97 Aligned_cols=36 Identities=17% Similarity=0.153 Sum_probs=27.8
Q ss_pred Hhccccccccchhhhcc---------cCeEEEEecCcCccccCceE
Q 003371 432 MMTDQAMVRKLPACETM---------GSATVICTDKTGTLTLNQMK 468 (825)
Q Consensus 432 m~k~~~lvr~l~a~E~l---------g~v~~Ic~DKTGTLT~n~m~ 468 (825)
+.|.++++|++.++|.+ .+.. |+||||||||+....
T Consensus 16 l~k~~v~ikd~~~~e~~i~~~~kgg~~kL~-VV~DfdgTLT~~~~~ 60 (297)
T 4fe3_A 16 FQKSSVRIKNPTRVEEIICGLIKGGAAKLQ-IITDFNMTLSRFSYN 60 (297)
T ss_dssp GTSTTEECSCHHHHHHHHHHHHHHHHHHEE-EEECCTTTTBCSEET
T ss_pred HhcCCeEEcChHHHHHHHHHHHhCcchhEE-EEEcCCCCceeeccC
Confidence 57889999999999874 2233 677999999986543
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=83.26 E-value=1.2 Score=41.35 Aligned_cols=41 Identities=10% Similarity=-0.033 Sum_probs=34.9
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHcCCcc
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDN---VFTAKAIATECGILR 706 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~---~~tA~aIA~~~GI~~ 706 (825)
+-|++.++|+.++++|+.++++||.+ ...+....++.|+..
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~ 68 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEF 68 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCe
Confidence 34799999999999999999999997 566777788888853
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=81.47 E-value=1.4 Score=48.72 Aligned_cols=40 Identities=15% Similarity=0.258 Sum_probs=33.8
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCC------------HHHHHHHHHHcCCc
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDN------------VFTAKAIATECGIL 705 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~------------~~tA~aIA~~~GI~ 705 (825)
+-||+.++++.|+++|+++.++|+.. ...+..+.+++|+.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~ 139 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP 139 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC
Confidence 57999999999999999999999955 22377888889984
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 825 | ||||
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 9e-37 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 6e-36 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 1e-31 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 2e-22 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 4e-22 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 3e-20 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 5e-20 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 3e-15 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 4e-13 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 3e-08 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 3e-07 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 2e-06 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 3e-05 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 3e-04 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 6e-04 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 8e-04 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 8e-04 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 0.003 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 133 bits (336), Expect = 9e-37
Identities = 58/161 (36%), Positives = 90/161 (55%), Gaps = 2/161 (1%)
Query: 655 TLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKG 714
T DP R V +++ C+ AG+ + MITGDN TA AI GI +++V
Sbjct: 10 TGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVA-D 68
Query: 715 EVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPA 774
G EF + E+ + + AR P K +V+ L+ + A+TGDG NDAPA
Sbjct: 69 RAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPA 128
Query: 775 LKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPG 815
LK+A++G++MG GT VAK +S++V+ DD+F+++ + G
Sbjct: 129 LKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 138 bits (347), Expect = 6e-36
Identities = 42/389 (10%), Positives = 101/389 (25%), Gaps = 57/389 (14%)
Query: 439 VRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQG 498
L +G + I + + ++ F ++ I+ + +S D+
Sbjct: 27 YELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQ--KDKILNKLKSLGLNSNWDMLFIV 84
Query: 499 VGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSE 558
++ + KL +A + + +++ + +
Sbjct: 85 FSIHLIDILKKL----------SHDEIEAFMY-QDEPVELKLQNISTNLADCFNLNEQLP 133
Query: 559 KKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMA 618
+ + K + + A + + ++ + +A
Sbjct: 134 LQFLDNVKVGKNNIYA-ALEEFATTELHVSDAT---------------LFSLKGALWTLA 177
Query: 619 ASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPC--RPGVQKAVEA 676
+ K + E G + + V+ +
Sbjct: 178 QEVYQEWYLGSKLYEDVEK-----------KIARTTFKTGYIYQEIILRPVDEVKVLLND 226
Query: 677 CQSAGVEIKMITGDNVFTAKAIATECGILRL---DQQVEKGEVVEGVEFRNYTDEERIQK 733
+ AG E+ + TG G+L D +V+E
Sbjct: 227 LKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPN 286
Query: 734 VD---KIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEAD---VGLSMGIQ 787
++ + Q V + GD D + ++ +G G++
Sbjct: 287 PFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLK 346
Query: 788 GTEVAKE----SSDIVILDDDFTSVATVL 812
G + A E +D VI + + VL
Sbjct: 347 GKDAAGELEAHHADYVI--NHLGELRGVL 373
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 120 bits (302), Expect = 1e-31
Identities = 36/213 (16%), Positives = 68/213 (31%), Gaps = 13/213 (6%)
Query: 467 MKVTKFWLGQESI--------VQETYCKIASSIRDLFHQGVGLNT-TGSVSKLKPGSSVA 517
M V W + T+ K + + L N + S
Sbjct: 2 MTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKR 61
Query: 518 EFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIH 577
+ +G +E A+L + K++ + + +FNS K + R+ + +H+
Sbjct: 62 DTAGDASESALLKCI-ELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVL 120
Query: 578 -WKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEE 636
KGA E IL CS G +D + +N + R + F + +
Sbjct: 121 VMKGAPERILDRCSSIL-VQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGK 179
Query: 637 TAYNNDVKARQR-LKEEGLTLLGIVGIKDPCRP 668
+ E L +G++ + D
Sbjct: 180 FPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHH 212
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 94.6 bits (234), Expect = 2e-22
Identities = 40/233 (17%), Positives = 74/233 (31%), Gaps = 36/233 (15%)
Query: 459 TGTLTLNQMKVT--------KFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKL 510
+LN+ +T + + I + + +L N S
Sbjct: 14 GDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQF----DGLVELATICALCND--SSLDF 67
Query: 511 KPGSSVAEFSGSPTEKAVLSWA---------------VLEMGMEMDKVKQKYSILHVETF 555
V E G TE A+ + V ++Q F
Sbjct: 68 NETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEF 127
Query: 556 NSEKKRSGVLIRRKADNTTH----IHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQME 611
+ ++K V + + KGA E ++ C++ M G + ++
Sbjct: 128 SRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVR-VGTTRVPMTGPVKEKIL 186
Query: 612 NIIH--GMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGI 662
++I G +LRC+A A + + D +R E LT +G+VG+
Sbjct: 187 SVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 90.5 bits (224), Expect = 4e-22
Identities = 47/159 (29%), Positives = 73/159 (45%), Gaps = 34/159 (21%)
Query: 654 LTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEK 713
T G D + + AV+ + G+++ MITGDN +A+A
Sbjct: 10 KTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEA---------------- 53
Query: 714 GEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAP 773
++++ V+A P K V+ L + VVA GDG NDAP
Sbjct: 54 ----------------ISRELNLDLVIAEVLPHQKSEEVKKL-QAKEVVAFVGDGINDAP 96
Query: 774 ALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVL 812
AL +AD+G+++G G++VA ES DIV++ DD V +
Sbjct: 97 ALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAI 134
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 92.4 bits (229), Expect = 3e-20
Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 17/153 (11%)
Query: 326 MMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYN 385
++ ++TPLQ +LD+ + KV + V ++ + + G
Sbjct: 120 KEYEPAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWI----- 174
Query: 386 GSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPAC 445
+ AV + V AIPEGLP +T LA +RM A+VR LP+
Sbjct: 175 ----------RGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSV 224
Query: 446 ETMGSATVICTDK--TGTLTLNQMKVTKFWLGQ 476
ET+G A + ++ N +V +L
Sbjct: 225 ETLGRAIYNNMKQFIRYLISSNVGEVVCIFLTA 257
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 92.0 bits (228), Expect = 5e-20
Identities = 32/163 (19%), Positives = 60/163 (36%), Gaps = 14/163 (8%)
Query: 103 KDSHTLSLLGGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLE 162
+ +H+ S E G + G+ + V R + +G N K L V+E
Sbjct: 2 EAAHSKS----TEECLAYFGVSETTGLT--PDQVKRHLEKYGHNELPAEEGKSLWELVIE 55
Query: 163 AFKDTTILILLVCAALSLGFGIKEHGAEE--GWYEGGSIFVAVFLVIVVSAFSNFRQARQ 220
F+D + ILL+ A +S E G E + E I + + +V +
Sbjct: 56 QFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENA 115
Query: 221 FDKLSKI-SNNIKVEVVREARRL-----QISIFDLVVGDIVFL 257
+ L + + + ++L Q+S ++ V+L
Sbjct: 116 IEALKEYEPAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWL 158
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 70.5 bits (172), Expect = 3e-15
Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 15/111 (13%)
Query: 235 VVREARRL--QISIFDLVVGDIVFLKIGDQIPADGLFLDGH--SLQVDESSMTGESDHV- 289
V R R+ +I D+V GDIV + +GD++PAD L +L+VD+S +TGES V
Sbjct: 5 VYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVI 64
Query: 290 ----------EVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSI 330
V+ LFSG+ +A G A +V + G++T G++ +
Sbjct: 65 KHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 67.3 bits (163), Expect = 4e-13
Identities = 18/146 (12%), Positives = 40/146 (27%), Gaps = 9/146 (6%)
Query: 667 RPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYT 726
R G ++ V + +I+G F + D+ +
Sbjct: 77 REGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEK--DRIYCNHASFDNDYIHID- 133
Query: 727 DEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGI 786
+ K ++ L + + + GD D A K +D+ +
Sbjct: 134 -----WPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDY 188
Query: 787 QGTEVAKESSDIVILDDDFTSVATVL 812
+E + + DF + +
Sbjct: 189 -LLNECREQNLNHLPYQDFYEIRKEI 213
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.6 bits (125), Expect = 3e-08
Identities = 26/137 (18%), Positives = 51/137 (37%), Gaps = 10/137 (7%)
Query: 667 RPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYT 726
PG+++ V Q V++ +I+G + +A++ I ++ Y
Sbjct: 84 TPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNI---PATNVFANRLKFYFNGEYA 140
Query: 727 DEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMG- 785
D+ + A S K++ + K + + GDG D A AD + G
Sbjct: 141 ------GFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGG 194
Query: 786 IQGTEVAKESSDIVILD 802
+ K+++ I D
Sbjct: 195 NVIRQQVKDNAKWYITD 211
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 49.8 bits (117), Expect = 3e-07
Identities = 20/148 (13%), Positives = 47/148 (31%), Gaps = 13/148 (8%)
Query: 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRN 724
G ++ ++ ++ G + +++G I + G+ +
Sbjct: 75 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVK--------- 125
Query: 725 YTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSM 784
D + V+ + + + + GDG ND K+A + ++
Sbjct: 126 --DGKLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF 183
Query: 785 GIQGTEVAKESSDIVILDDDFTSVATVL 812
+ KE +DI I D + +
Sbjct: 184 C--AKPILKEKADICIEKRDLREILKYI 209
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 47.2 bits (111), Expect = 2e-06
Identities = 16/81 (19%), Positives = 23/81 (28%), Gaps = 1/81 (1%)
Query: 724 NYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLS 783
+ I D++ K V K + V GD ND L EA G+
Sbjct: 110 LLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGIL 169
Query: 784 MGIQGTEVAKESSDIVILDDD 804
V +E +
Sbjct: 170 FH-APENVIREFPQFPAVHTY 189
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 43.9 bits (102), Expect = 3e-05
Identities = 29/200 (14%), Positives = 60/200 (30%), Gaps = 56/200 (28%)
Query: 668 PGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGI----------------------- 704
+A+ +S G+ I ++TG+ V A+A + G
Sbjct: 22 EKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLAS 81
Query: 705 --------LRLDQQVEKGEVVEGVEFRNYT--------DEERIQKVDK------------ 736
+ ++ + R + E ++++
Sbjct: 82 MDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSG 141
Query: 737 ----IRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVA 792
++ + + L K VA GDG ND A K +++ Q ++
Sbjct: 142 FAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVA-QAPKIL 200
Query: 793 KESSDIVILDDDFTSVATVL 812
KE++D V + A +
Sbjct: 201 KENADYVTKKEYGEGGAEAI 220
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 41.5 bits (96), Expect = 3e-04
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 748 KLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTS 807
K L Q AV GD ND L+ A G++MG E K +D V L +D
Sbjct: 219 KRLAKQLNIPLEETAAV-GDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHG 276
Query: 808 VATVL 812
VA ++
Sbjct: 277 VAHMM 281
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 40.3 bits (93), Expect = 6e-04
Identities = 16/79 (20%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Query: 734 VDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAK 793
++ + K L K ++A+ GD ND ++ A VG+++ K
Sbjct: 189 LEILDKRVNKGTGVKSLADVLGIKPEEIMAI-GDQENDIAMIEYAGVGVAVD-NAIPSVK 246
Query: 794 ESSDIVILDDDFTSVATVL 812
E ++ V + VA +
Sbjct: 247 EVANFVTKSNLEDGVAFAI 265
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 40.0 bits (92), Expect = 8e-04
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 748 KLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTS 807
+ L + KK +V GD ND +EA + ++M E KE+SDIV L ++ +
Sbjct: 196 RFLRERMNWKKEEIVVF-GDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSG 253
Query: 808 VATVL 812
V+ VL
Sbjct: 254 VSYVL 258
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 39.5 bits (91), Expect = 8e-04
Identities = 23/117 (19%), Positives = 44/117 (37%), Gaps = 14/117 (11%)
Query: 709 QQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPF---------DKLLMVQCLKKKG 759
++ EV++ F +E+ + + R P K + + +
Sbjct: 139 EEASNKEVIQMTPFITEEEEKEVLPSIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHF 198
Query: 760 HV----VAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVL 812
+ GDG ND L+ A +G++MG Q E K ++D V D ++ +
Sbjct: 199 GIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAM 254
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 38.0 bits (87), Expect = 0.003
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Query: 734 VDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAK 793
+D I + L+ + +VVA+ GD NDA LK A +MG E K
Sbjct: 182 IDLIIPGLHKANGISRLLKRWDLSPQNVVAI-GDSGNDAEMLKMARYSFAMG-NAAENIK 239
Query: 794 ESSDIVILDDDFTSVATVL 812
+ + D++ V+
Sbjct: 240 QIARYATDDNNHEGALNVI 258
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 825 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 100.0 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.97 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.96 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.96 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.96 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.91 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.91 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.21 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.11 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.03 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.02 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.97 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.9 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.88 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.87 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.83 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.79 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.73 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.71 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.71 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.46 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.28 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.22 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.62 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.52 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.46 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.41 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.35 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.25 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 96.94 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.78 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.51 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.38 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.27 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.03 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 95.82 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 95.81 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 95.81 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 95.42 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 95.4 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 94.64 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 94.44 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 94.38 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 93.64 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 91.88 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 91.48 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 91.09 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 91.03 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 90.63 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 89.27 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 89.24 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 87.53 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 86.8 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1.8e-38 Score=308.78 Aligned_cols=150 Identities=38% Similarity=0.626 Sum_probs=144.4
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
||+||+++++|+.||++||+|+|+|||+..||++||++|||+..+.+. ....++|.+++.++..++.+.+++..||||+
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v-~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 97 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEV-ADRAYTGREFDDLPLAEQREACRRACCFARV 97 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCC-TTTEEEHHHHHHSCHHHHHHHHHHCCEEESC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCcccc-ccccccccccchhhHHHHhhhhhhhhhhhcc
Confidence 999999999999999999999999999999999999999999865443 4567999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHh
Q 003371 744 SPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPG 815 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~g 815 (825)
+|+||..+|+.||++|++|+|+|||+||+|||++|||||||| +|+++|+++|||||++|+|++|+++|+||
T Consensus 98 ~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~-~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 98 EPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEec-cccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999 89999999999999999999999999998
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.97 E-value=6e-32 Score=252.13 Aligned_cols=124 Identities=40% Similarity=0.561 Sum_probs=109.9
Q ss_pred EeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhcc
Q 003371 656 LLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVD 735 (825)
Q Consensus 656 llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~ 735 (825)
..+.++++||+||+++++|+.|+++||+|+|+|||+..||.++|++|||..
T Consensus 12 ~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~----------------------------- 62 (135)
T d2b8ea1 12 GTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL----------------------------- 62 (135)
T ss_dssp CCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-----------------------------
T ss_pred eEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhh-----------------------------
Confidence 456789999999999999999999999999999999999999999999954
Q ss_pred CeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 736 KIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 736 ~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
++++++|++|..+|+.+|+. ++|+|+|||.||+|||++|||||||| +|+++++++||++|++++|++|+.+|+
T Consensus 63 ---v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~-~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 63 ---VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp ---EECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEEC-CC--------SEEESSCCTHHHHHHHC
T ss_pred ---hccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecC-ccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 89999999999999999864 69999999999999999999999999 899999999999999999999999874
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.96 E-value=8.4e-30 Score=258.68 Aligned_cols=201 Identities=17% Similarity=0.221 Sum_probs=151.5
Q ss_pred eEEEEEEeccccccccc-------cccCChHHHHHHHHHHhhcCCccccccCC--CCCcceecCChhHHHHHHHHHHHcC
Q 003371 467 MKVTKFWLGQESIVQET-------YCKIASSIRDLFHQGVGLNTTGSVSKLKP--GSSVAEFSGSPTEKAVLSWAVLEMG 537 (825)
Q Consensus 467 m~v~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~~i~~n~~~~~~~~~~--~~~~~~~~g~p~e~All~~a~~~~g 537 (825)
|+|+++|++++.+.... ...........|..++++|+.+.+..... ........|+|||.||+.|+. +.|
T Consensus 2 MTV~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~-~~~ 80 (214)
T d1q3ia_ 2 MTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIE-LSC 80 (214)
T ss_dssp CEEEEEEETTEEEECCCC------CCCCCSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHH-HHH
T ss_pred eEEEEEEECCEEEEcCCCCcCCCcccccCCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHH-HhC
Confidence 99999999887654321 11233345555667777787776653211 112346789999999999998 899
Q ss_pred CchHHHhhcceEEEEecCCCCCceeEEEEEecCC-CeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHH
Q 003371 538 MEMDKVKQKYSILHVETFNSEKKRSGVLIRRKAD-NTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHG 616 (825)
Q Consensus 538 ~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~-~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~ 616 (825)
.++..++..+++++.+||+|++|+|+++++.+.+ +.+++|+|||||.||++|++++. +|...+|+++.++.+.+.+++
T Consensus 81 ~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~-~g~~~~l~~~~~~~i~~~~~~ 159 (214)
T d1q3ia_ 81 GSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILV-QGKEIPLDKEMQDAFQNAYLE 159 (214)
T ss_dssp SCHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHH
T ss_pred CCHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheee-CCceeechHHHHHHHHHHHHH
Confidence 9999999999999999999999999999987643 45889999999999999999886 899999999999999999999
Q ss_pred HhhccCeEEEEEEeecCchhhcccchh-HHhhhhhccCeEEeeeecccCCCccc
Q 003371 617 MAASSLRCIAFAYKQVSEEETAYNNDV-KARQRLKEEGLTLLGIVGIKDPCRPG 669 (825)
Q Consensus 617 ~a~~glR~l~lA~k~l~~~e~~~~~~~-~~~~~~~e~~l~llG~v~i~DplR~~ 669 (825)
||++|+||||||||+++.++....... ....+..+++|+|+|++||.||||++
T Consensus 160 ~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 160 LGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp HHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred HhhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 999999999999999976432211111 12234568899999999999999975
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.96 E-value=5.4e-31 Score=299.18 Aligned_cols=241 Identities=25% Similarity=0.376 Sum_probs=197.8
Q ss_pred CHHHHHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCC--
Q 003371 113 GVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAE-- 190 (825)
Q Consensus 113 gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~-- 190 (825)
+++++++.|+||+++||+++| +++|+++||+|++++++++|+|++++++|+|+++++|++++++|+++|...++..
T Consensus 8 ~~e~v~~~l~td~~~GLs~~e--a~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~ 85 (472)
T d1wpga4 8 STEECLAYFGVSETTGLTPDQ--VKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGEETI 85 (472)
T ss_dssp CHHHHHHHHTCCTTTCBCHHH--HHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCTTSTT
T ss_pred CHHHHHHHhCcCcccCcCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 799999999999999998865 9999999999999999999999999999999999999999999999997655433
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEE
Q 003371 191 EGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFL 270 (825)
Q Consensus 191 ~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili 270 (825)
..|+|++.|++.+++...+..+++++.++..+++.+.....
T Consensus 86 ~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~~--------------------------------------- 126 (472)
T d1wpga4 86 TAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA--------------------------------------- 126 (472)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCCC---------------------------------------
T ss_pred hhHhHhhhhhheeeeeeeEEeEEechHHHHHHHHhhhcccc---------------------------------------
Confidence 47999999999998888888888888887777776432110
Q ss_pred ecCcceecCCCCCCCCCeeeecCCCCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHHHH
Q 003371 271 DGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTST 350 (825)
Q Consensus 271 ~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~ 350 (825)
...+++|+|.++++++..
T Consensus 127 --------------------------------------------------------------~~~~~~P~d~~l~~~g~~ 144 (472)
T d1wpga4 127 --------------------------------------------------------------TEQDKTPLQQKLDEFGEQ 144 (472)
T ss_dssp --------------------------------------------------------------CCCCCCHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------ccccCchHHHHHHHHHHH
Confidence 113458999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHH
Q 003371 351 IGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMK 430 (825)
Q Consensus 351 i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~ 430 (825)
++..+..+++..+...+ +.....-....| ...++.+|..+++++|+++|||||+++|++|+++++
T Consensus 145 i~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~----------~~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~ 209 (472)
T d1wpga4 145 LSKVISLICVAVWLINI-----GHFNDPVHGGSW----------IRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTR 209 (472)
T ss_dssp HHHHHHHHHHHHHHHCC-----TTSSSCCSSSCS----------SSCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-----HHHHHHHhhhhh----------HHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHH
Confidence 98877766665554422 111110000111 124567788999999999999999999999999999
Q ss_pred HHhccccccccchhhhcccCeEEEEecCc--CccccCceEEEE
Q 003371 431 RMMTDQAMVRKLPACETMGSATVICTDKT--GTLTLNQMKVTK 471 (825)
Q Consensus 431 ~m~k~~~lvr~l~a~E~lg~v~~Ic~DKT--GTLT~n~m~v~~ 471 (825)
||+|+|++||++++||++|+.+++|+||| +|||.|.+.+..
T Consensus 210 rmak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n~~~v~~ 252 (472)
T d1wpga4 210 RMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGEVVC 252 (472)
T ss_dssp HHHTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhhhHHHHHH
Confidence 99999999999999999999999999998 999999877644
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.96 E-value=3.3e-34 Score=316.89 Aligned_cols=328 Identities=12% Similarity=0.053 Sum_probs=225.9
Q ss_pred ccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccccccccCChHHHHHHHHHHhhcCCccccccCCCCCccee
Q 003371 440 RKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEF 519 (825)
Q Consensus 440 r~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~ 519 (825)
+-+.+.|+||..++||+|||||+|.|+|++..+..+.. ........++.. ++++....+++..... ..
T Consensus 28 ~ll~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~i-l~~~k~~g~n~~-~dl~~~~~~~~~~~~~----------~~ 95 (380)
T d1qyia_ 28 ELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKI-LNKLKSLGLNSN-WDMLFIVFSIHLIDIL----------KK 95 (380)
T ss_dssp HHHHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHH-HHHHHHTTCCCH-HHHHHHHHHHHHHHHH----------TT
T ss_pred HHhhchhhcccceeeecCcccchhhhhheeeeecchhh-hHhhhhcCCChh-HHHHHHHHHHHHHHHH----------hh
Confidence 44567899999999999999999999998854332211 100001112211 2232222222221111 12
Q ss_pred cCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcccccccCCee
Q 003371 520 SGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVI 599 (825)
Q Consensus 520 ~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~ 599 (825)
.++|++.+++.... ..+..+...++.+......||++.+|+|+++....++ .+....||+++.+.
T Consensus 96 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~-~~~~~~~~a~~~~~------------- 160 (380)
T d1qyia_ 96 LSHDEIEAFMYQDE-PVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNN-IYAALEEFATTELH------------- 160 (380)
T ss_dssp SCHHHHHHHHHCSS-CHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHH-HHHHHHHHHHHHTT-------------
T ss_pred cCCCcHHHHHHHHh-hccchHHHHHHhccccccCCcchHHHHHhhhcccccc-hhHhhhhccHhhcC-------------
Confidence 56788888876543 3333455666777778889999999999876433222 23344556665542
Q ss_pred ecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcc--cHHHHHHHH
Q 003371 600 KSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRP--GVQKAVEAC 677 (825)
Q Consensus 600 ~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~--~v~~aI~~l 677 (825)
+++..+..+...+..|+.+|+|++++|++.++..+. ....+....|+++.+||+|| |++++++.|
T Consensus 161 --~~~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~~-----------~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~l 227 (380)
T d1qyia_ 161 --VSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEK-----------KIARTTFKTGYIYQEIILRPVDEVKVLLNDL 227 (380)
T ss_dssp --CSCCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHHC-----------SCCSCSSCCCTTTTCCBSSCHHHHHHHHHHH
T ss_pred --CcHHHHHHHHhHHHHHHHHHHHHHHHhhhccccccc-----------ccchhhHhcccccccccccchhhHHHHHHHH
Confidence 233445566778889999999999999976643211 12234456799999999665 999999999
Q ss_pred HhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHH---------HhhccCeeEEEecCHHHH
Q 003371 678 QSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEER---------IQKVDKIRVMARSSPFDK 748 (825)
Q Consensus 678 ~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~---------~~~~~~~~V~ar~sP~dK 748 (825)
+++||++.|+|||+..+|+++++++||..... ...++.+.+......... ...+....+++|.+|.+|
T Consensus 228 k~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~---~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k 304 (380)
T d1qyia_ 228 KGAGFELGIATGRPYTETVVPFENLGLLPYFE---ADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYES 304 (380)
T ss_dssp HHTTCEEEEECSSCHHHHHHHHHHHTCGGGSC---GGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHH
T ss_pred HHCCCeEEEECCCCHHHHHHHHHHcCCcccCC---cceEEecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHH
Confidence 99999999999999999999999999975321 123445544321110000 011222346899999999
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHHhhhCC---ccEecCCCchHHHHH----hcCeeeccCCchHHHHHH
Q 003371 749 LLMVQCLKKKGHVVAVTGDGTNDAPALKEAD---VGLSMGIQGTEVAKE----SSDIVILDDDFTSVATVL 812 (825)
Q Consensus 749 ~~lV~~Lq~~g~vVa~~GDG~NDapALk~Ad---VGiamg~~gt~vAk~----aaDivlldd~f~sIv~~i 812 (825)
..+|+.++..++.|+|||||.||+||+|+|| ||++||..|++++++ .||+|+ +++..|.+++
T Consensus 305 ~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii--~~~~el~~il 373 (380)
T d1qyia_ 305 YINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI--NHLGELRGVL 373 (380)
T ss_dssp HHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEE--SSGGGHHHHH
T ss_pred HHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEE--CCHHHHHHHH
Confidence 9999999999999999999999999999999 999999999987665 899999 5788875543
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.91 E-value=1.8e-25 Score=201.01 Aligned_cols=99 Identities=36% Similarity=0.546 Sum_probs=89.8
Q ss_pred eeEEEeCCEE--EEEEecCcccCeEEEeCCCCeeeceEEEEe--cCcceecCCCCCCCCCeeeecCC-----------CC
Q 003371 232 KVEVVREARR--LQISIFDLVVGDIVFLKIGDQIPADGLFLD--GHSLQVDESSMTGESDHVEVDST-----------NN 296 (825)
Q Consensus 232 ~v~V~R~g~~--~~I~~~dLvvGDIV~l~~Gd~VPaDgili~--g~~l~VDES~LTGEs~pv~k~~~-----------~~ 296 (825)
..+|+|+|++ ++|++.||||||||.|++||+|||||+|+. +.++.||||+|||||.|+.|.+. ..
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~ 81 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK 81 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence 5789999985 789999999999999999999999999986 44588999999999999999642 35
Q ss_pred ceeeeCceeeeceEEEEEEEEcccchHHHHHhhc
Q 003371 297 PFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSI 330 (825)
Q Consensus 297 ~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~ 330 (825)
|++|+||.|.+|+++++|++||.+|.+|+|++++
T Consensus 82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred ceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence 7899999999999999999999999999998763
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.91 E-value=3.3e-24 Score=220.95 Aligned_cols=167 Identities=20% Similarity=0.242 Sum_probs=132.6
Q ss_pred HHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCchH----------------HHhhcceEEEEecCC
Q 003371 493 DLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMD----------------KVKQKYSILHVETFN 556 (825)
Q Consensus 493 ~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~----------------~~~~~~~i~~~~~F~ 556 (825)
+.+..+.++|+.+.+... ...+.+...|+|||.||+.++. +.|+++. ..++.|++++.+||+
T Consensus 51 ~~ll~~~~LCn~a~l~~~-~~~~~~~~~G~pTE~ALl~~a~-k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~pF~ 128 (239)
T d1wpga3 51 VELATICALCNDSSLDFN-ETKGVYEKVGEATETALTTLVE-KMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFS 128 (239)
T ss_dssp HHHHHHHHHSCSCEEEEE-TTTTEEEEESCHHHHHHHHHHH-HHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCEeeec-CCCCeEEEcCCCCcHHHHHHHH-HhCCChHHhhccchhhhhccchhhhhhhCeEEEEeeec
Confidence 334455667777766543 3456678899999999999998 8887543 245789999999999
Q ss_pred CCCceeEEEEEecCCC----eEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHH--hhccCeEEEEEEe
Q 003371 557 SEKKRSGVLIRRKADN----TTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGM--AASSLRCIAFAYK 630 (825)
Q Consensus 557 s~~krmsvvv~~~~~~----~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~--a~~glR~l~lA~k 630 (825)
|+||||+|+++.++++ .+++|+|||||.||++|++++. +|...+++++.++.+.+.++++ |++||||||||||
T Consensus 129 S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A~k 207 (239)
T d1wpga3 129 RDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATR 207 (239)
T ss_dssp TTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEEEE
T ss_pred ccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceec-CCceeeCCHHHHHHHHHHHHHHhHhhCCCEEEEEEEE
Confidence 9999999999987653 3689999999999999998876 6788899999999999999986 7899999999999
Q ss_pred ecCchhhcccchhHHhhhhhccCeEEeeeecc
Q 003371 631 QVSEEETAYNNDVKARQRLKEEGLTLLGIVGI 662 (825)
Q Consensus 631 ~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i 662 (825)
+++..+.....+........|+||+|+|++||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 208 DTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp SSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred ECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence 99764332221112234567899999999986
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.21 E-value=2.3e-11 Score=121.76 Aligned_cols=151 Identities=20% Similarity=0.191 Sum_probs=106.5
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechh--h--------------------
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVE--F-------------------- 722 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~--~-------------------- 722 (825)
.+.+.+.+++++|+++|+.|.++||.....+..+++.+++..+.....+..+..... +
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 467899999999999999999999999999999999998853211100110000000 0
Q ss_pred ------------------hcCCHHH---HHhhcc-C-------eeEEEecCHHHHHHHHHHHHhC----CCEEEEEcCCc
Q 003371 723 ------------------RNYTDEE---RIQKVD-K-------IRVMARSSPFDKLLMVQCLKKK----GHVVAVTGDGT 769 (825)
Q Consensus 723 ------------------~~~~~~~---~~~~~~-~-------~~V~ar~sP~dK~~lV~~Lq~~----g~vVa~~GDG~ 769 (825)
.....+. +.+.+. . ..+-.......|...++.+.++ .+.|+++|||.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~ 178 (230)
T d1wr8a_ 99 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 178 (230)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCc
Confidence 0000111 111111 1 1122333455777777777554 35689999999
Q ss_pred cCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhH
Q 003371 770 NDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGD 816 (825)
Q Consensus 770 NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR 816 (825)
||.|||+.|++||||| ++++.+|++||+|+.+++...++.+++...
T Consensus 179 NDi~ml~~ag~~vav~-na~~~~k~~A~~v~~~~~~~gv~~~i~~~l 224 (230)
T d1wr8a_ 179 NDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYHIL 224 (230)
T ss_dssp GGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHHHH
T ss_pred cHHHHHHHCCeEEEEC-CCCHHHHHhCCEEECCCCcCHHHHHHHHHH
Confidence 9999999999999999 899999999999999999999999987654
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.11 E-value=1.9e-10 Score=115.32 Aligned_cols=151 Identities=15% Similarity=0.147 Sum_probs=104.9
Q ss_pred cCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechh---------------------
Q 003371 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVE--------------------- 721 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~--------------------- 721 (825)
+..+.+++.++++.|++.|+.++++||.+...+..++...|+..+-...++..+.+...
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 97 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHh
Confidence 34567899999999999999999999999999999999999854311111111111000
Q ss_pred ----------hhc------CCH---HHHHhhc--cCeeE-------EEecCHHHHHHHHHHHHhC----CCEEEEEcCCc
Q 003371 722 ----------FRN------YTD---EERIQKV--DKIRV-------MARSSPFDKLLMVQCLKKK----GHVVAVTGDGT 769 (825)
Q Consensus 722 ----------~~~------~~~---~~~~~~~--~~~~V-------~ar~sP~dK~~lV~~Lq~~----g~vVa~~GDG~ 769 (825)
++. ... +...... ....+ --.....+|...++.|.++ ..-|+++|||.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~ 177 (225)
T d1l6ra_ 98 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 177 (225)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred cCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCc
Confidence 000 000 1111110 11111 1122345888888877654 24488889999
Q ss_pred cCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHH
Q 003371 770 NDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSP 814 (825)
Q Consensus 770 NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~ 814 (825)
||.||++.|++||||+ ++.+.+|+.||+|...++..+|.++++.
T Consensus 178 nD~~m~~~a~~~vav~-na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 178 NDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp GGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred chHHHHHHCCeEEEEC-CCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 9999999999999999 8999999999999999999999998863
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.03 E-value=1.4e-10 Score=116.15 Aligned_cols=149 Identities=11% Similarity=0.049 Sum_probs=108.9
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
+++|++.+.++.|++.|+++.++|+-....+..+.+++|+...... .....++..+... ...+......+.+
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~a--n~~~~~~~~~~~~------~~~~~~~~~~~~k 146 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYC--NHASFDNDYIHID------WPHSCKGTCSNQC 146 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEE--EEEECSSSBCEEE------CTTCCCTTCCSCC
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceee--eeEEEeCCcceec------cccccccccccCC
Confidence 5789999999999999999999999999999999999998642100 0011111111000 0001111345678
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhccc
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGC 822 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni 822 (825)
|..|..+++.++..++.|.|+||+.||.+|+++||++||++..++.+.++..+.+ .-++|+.|+..+++-..+.+.|
T Consensus 147 ~~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~-~~~d~~~i~~~l~~~~~~~~~~ 223 (226)
T d2feaa1 147 GCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHL-PYQDFYEIRKEIENVKEVQEWL 223 (226)
T ss_dssp SSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEE-CCSSHHHHHHHHHTSHHHHHHH
T ss_pred HHHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCee-ecCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999998899999999999999999999999999843444444445544 4568999999998877766654
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.02 E-value=2.7e-10 Score=113.88 Aligned_cols=129 Identities=20% Similarity=0.204 Sum_probs=92.9
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccc-eeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKG-EVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~-~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
+++|++++.|+.||+.|++++++||.....+..+++.+||...+...+.. ...+|....... ...-.
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~------------~~p~~ 149 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDE------------TQPTA 149 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECT------------TSGGG
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhcccccee------------eeeee
Confidence 46899999999999999999999999999999999999996421100000 000111000000 00013
Q ss_pred CHHHHHHHHHHHHhC--CCEEEEEcCCccCHHHhhhCCccEecCCC-chHHHHHhcCeeeccCCchH
Q 003371 744 SPFDKLLMVQCLKKK--GHVVAVTGDGTNDAPALKEADVGLSMGIQ-GTEVAKESSDIVILDDDFTS 807 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~--g~vVa~~GDG~NDapALk~AdVGiamg~~-gt~vAk~aaDivlldd~f~s 807 (825)
.+..|..+++.++++ -..+.++|||.||.+|++.|++++|+|.+ ..+..++.+|.++. +|..
T Consensus 150 ~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~--~f~e 214 (217)
T d1nnla_ 150 ESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVE 214 (217)
T ss_dssp STTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGG
T ss_pred ccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeC--CHHH
Confidence 467899999999864 24688999999999999999999999733 45677788999985 5654
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.97 E-value=8.6e-10 Score=106.17 Aligned_cols=108 Identities=16% Similarity=0.249 Sum_probs=88.0
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHH
Q 003371 672 KAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLM 751 (825)
Q Consensus 672 ~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~l 751 (825)
.+|+.++..|+.+.++||+....+...++++++.. ++... .+|...
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~--------------------------------~~~~~--~~K~~~ 84 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------FFLGK--LEKETA 84 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE--------------------------------EEESC--SCHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc--------------------------------ccccc--ccHHHH
Confidence 48999999999999999999999999999999864 33333 355555
Q ss_pred HHHHHh-C---CCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCC----chHHHHHHHH
Q 003371 752 VQCLKK-K---GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDD----FTSVATVLSP 814 (825)
Q Consensus 752 V~~Lq~-~---g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~----f~sIv~~i~~ 814 (825)
++.+.+ . ...|+++|||.||.|+|+.|++|+||+ ++.+.+|+.||+|+.... +..++..|..
T Consensus 85 l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~-nA~~~vk~~A~~Vt~~~GG~GavrE~~e~il~ 154 (177)
T d1k1ea_ 85 CFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSDMILQ 154 (177)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHHHHHH
T ss_pred HHHHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcC-CccHHHHHhCCEEeCCCCCCchHHHHHHHHHH
Confidence 554433 2 477999999999999999999999999 899999999999998765 5555555543
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.90 E-value=1.5e-09 Score=111.55 Aligned_cols=66 Identities=23% Similarity=0.255 Sum_probs=57.9
Q ss_pred HHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 747 DKLLMVQCLKKK----GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 747 dK~~lV~~Lq~~----g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
+|...|+.|.+. ...|+++|||.||.+||+.|+.|+||+ ++++..|+.||+|...++=..+.++++
T Consensus 197 ~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~-na~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 197 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCcChHHHHHH
Confidence 699888888764 235889999999999999999999999 899999999999998777778888775
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.88 E-value=3.2e-09 Score=109.83 Aligned_cols=67 Identities=31% Similarity=0.393 Sum_probs=59.5
Q ss_pred HHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHH
Q 003371 747 DKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSP 814 (825)
Q Consensus 747 dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~ 814 (825)
+|..-++.|.+. | +.|+++|||.||.+||+.|+.|+||+ +|++.+|+.||+|....+-.+|.+++++
T Consensus 213 ~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~-na~~~~k~~A~~v~~~~~~~Gv~~~l~~ 283 (285)
T d1nrwa_ 213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMKH 283 (285)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred hhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHHH
Confidence 799988888764 2 45899999999999999999999999 8999999999999988888888888853
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.87 E-value=2.6e-09 Score=109.67 Aligned_cols=66 Identities=27% Similarity=0.325 Sum_probs=58.3
Q ss_pred HHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 747 DKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 747 dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
+|..-++.|.++ | +-|.++|||.||.|||+.|+.|+||+ ++.+.+|+.||.|+.+.+=.+|..+|+
T Consensus 190 sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~-Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 190 HKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred HHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 599888888764 3 34888999999999999999999999 899999999999998888888888875
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.83 E-value=4e-09 Score=108.67 Aligned_cols=66 Identities=27% Similarity=0.316 Sum_probs=53.2
Q ss_pred HHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccC-CchHHHHHHH
Q 003371 747 DKLLMVQCLKKK----GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDD-DFTSVATVLS 813 (825)
Q Consensus 747 dK~~lV~~Lq~~----g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd-~f~sIv~~i~ 813 (825)
.|...++.|.+. ...|+++|||.||.+||+.|++|+||+ +|.+.+|+.||+|+..+ +-..+..+++
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~-na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeC-CCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 576666666553 356999999999999999999999999 89999999999999754 4445666653
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.79 E-value=1.2e-08 Score=99.48 Aligned_cols=131 Identities=15% Similarity=0.125 Sum_probs=99.5
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
+..++....++.++ .+.++..+|+.........+...++..... ..++... ...........
T Consensus 69 ~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~-----~~l~~~~------------~~~~~~~~~~~ 130 (206)
T d1rkua_ 69 KPLEGAVEFVDWLR-ERFQVVILSDTFYEFSQPLMRQLGFPTLLC-----HKLEIDD------------SDRVVGYQLRQ 130 (206)
T ss_dssp CCCTTHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTTCCCEEE-----EEEEECT------------TSCEEEEECCS
T ss_pred cccchHHHHHHHhh-cCceEEEeccCchHHHHHHHHHhCCchhhc-----ceeeeec------------ccccccccccc
Confidence 45677777777765 789999999999999999999999865311 0111000 01122345556
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHh
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPG 815 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~g 815 (825)
+..+...++.++-..+.|+++|||.||.|||+.|++||||+ ++.++.++++|++.. .|+..+++++..-
T Consensus 131 ~~~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmn-a~~~v~~~~~~~~~~-~~~~d~~~~~~~~ 199 (206)
T d1rkua_ 131 KDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAV-HTYEDLKREFLKA 199 (206)
T ss_dssp SSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEE-CSHHHHHHHHHHH
T ss_pred hhhHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEEC-CCHHHHHhCCCceee-cCHHHHHHHHHHH
Confidence 67777888888888899999999999999999999999997 788888888899875 5788898877654
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.73 E-value=5.9e-09 Score=106.58 Aligned_cols=67 Identities=25% Similarity=0.330 Sum_probs=58.7
Q ss_pred HHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHH
Q 003371 747 DKLLMVQCLKKK----GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSP 814 (825)
Q Consensus 747 dK~~lV~~Lq~~----g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~ 814 (825)
.|..-++.|.++ ...++++|||.||.+||+.|+.|+||+ +|++.+|+.||+|...++=..|.++++.
T Consensus 186 sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~-na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred CHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeC-CCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 688888888664 356788899999999999999999999 8999999999999888888899998853
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.71 E-value=1.7e-08 Score=103.47 Aligned_cols=66 Identities=33% Similarity=0.447 Sum_probs=57.6
Q ss_pred HHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 747 DKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 747 dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
.|..-|+.|.++ | .-|+++|||.||.|||+.|++|+||| +|.+.+|+.||+|+.+++-.++..+|+
T Consensus 190 ~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~-na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred chhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 688888877654 2 34778899999999999999999999 899999999999999888889888874
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.71 E-value=7.9e-09 Score=100.96 Aligned_cols=131 Identities=15% Similarity=0.166 Sum_probs=93.2
Q ss_pred cCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEe
Q 003371 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMAR 742 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar 742 (825)
..++.+++.+.++.++..|..+.++||.....+....++.++..... ..+....... ......
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~------------~~~~~~ 135 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFA-----NRLIVKDGKL------------TGDVEG 135 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEE-----EEEEEETTEE------------EEEEEC
T ss_pred hhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhh-----hhhccccccc------------cccccc
Confidence 35788999999999999999999999999999999999998865211 1111111100 000000
Q ss_pred --cCHHHHHHHH----HHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHH
Q 003371 743 --SSPFDKLLMV----QCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVL 812 (825)
Q Consensus 743 --~sP~dK~~lV----~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i 812 (825)
..+..|...+ +.++-..+-+.++|||.||.||++.|++|||| ++.+..|+.||+|+-.+|+..|+++|
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~--na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 136 EVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF--CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp SSCSTTHHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE--SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred cccccccccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE--CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 1112233333 33333345688999999999999999999999 57888999999999888898887654
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.46 E-value=1.6e-07 Score=93.85 Aligned_cols=44 Identities=11% Similarity=0.043 Sum_probs=39.3
Q ss_pred cCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcc
Q 003371 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILR 706 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~ 706 (825)
.+...+.++++|++|+++|+++.++||.+...+..+.+++|+..
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~ 58 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence 34445778999999999999999999999999999999999864
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.28 E-value=7e-07 Score=89.62 Aligned_cols=145 Identities=12% Similarity=0.109 Sum_probs=94.1
Q ss_pred cHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccc--cccceeeechhhh---------cCC-----------
Q 003371 669 GVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQ--VEKGEVVEGVEFR---------NYT----------- 726 (825)
Q Consensus 669 ~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~--~~~~~vi~G~~~~---------~~~----------- 726 (825)
+...++.++++.|+.+.++||.+...+..+.+++++..+... ..+..+....... ...
T Consensus 22 ~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (244)
T d1s2oa1 22 EHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGF 101 (244)
T ss_dssp HHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcchHHHHHHHHHHhHHHHHHHHhhc
Confidence 445566777889999999999999999999999998654211 0111111111000 000
Q ss_pred -------------------------H---HHHH----hhccCee--------EEEecCHHHHHHHHHHHHhC-C---CEE
Q 003371 727 -------------------------D---EERI----QKVDKIR--------VMARSSPFDKLLMVQCLKKK-G---HVV 762 (825)
Q Consensus 727 -------------------------~---~~~~----~~~~~~~--------V~ar~sP~dK~~lV~~Lq~~-g---~vV 762 (825)
+ +++. +...... +---....+|...++.|.+. | ..|
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~gi~~~~~ 181 (244)
T d1s2oa1 102 EALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQT 181 (244)
T ss_dssp TTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGGE
T ss_pred ccccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHhccCChhhE
Confidence 0 1111 1111111 11123455799989888775 2 347
Q ss_pred EEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCe-------eeccCCchHHHHHHHH
Q 003371 763 AVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDI-------VILDDDFTSVATVLSP 814 (825)
Q Consensus 763 a~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDi-------vlldd~f~sIv~~i~~ 814 (825)
.++|||.||.|||+.|+.|++|| ++.+..|+.||. +=-.++...|.++++.
T Consensus 182 v~~GD~~ND~~Ml~~~~~~vav~-na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~ 239 (244)
T d1s2oa1 182 LVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp EEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred EEEcCCCCCHHHHhhCCcEEEeC-CCCHHHHHHhhcccccceEEcCCCCccHHHHHHHH
Confidence 88999999999999999999999 888989998884 4444456677777653
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.22 E-value=4.4e-06 Score=82.14 Aligned_cols=41 Identities=7% Similarity=-0.005 Sum_probs=38.3
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGIL 705 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~ 705 (825)
.+-+.+++++++|+++|+.++++||.+...+..+.+++|+.
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 46688999999999999999999999999999999999974
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.62 E-value=1.4e-05 Score=78.62 Aligned_cols=53 Identities=21% Similarity=0.332 Sum_probs=46.3
Q ss_pred HHHHHHHHHHhC-CCEEEEEcC----CccCHHHhhhCC-ccEecCCCchHHHHHhcCeee
Q 003371 747 DKLLMVQCLKKK-GHVVAVTGD----GTNDAPALKEAD-VGLSMGIQGTEVAKESSDIVI 800 (825)
Q Consensus 747 dK~~lV~~Lq~~-g~vVa~~GD----G~NDapALk~Ad-VGiamg~~gt~vAk~aaDivl 800 (825)
.|..-++.|.+. ..-|.++|| |-||.+||+.|. .|+||+ ++.|.+|..+||++
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~-na~~~~k~~~~~~~ 243 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFF 243 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHC
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcC-CHHHHHHHHHHhcC
Confidence 688888888764 567899999 569999999996 699999 99999999999986
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.52 E-value=8.3e-05 Score=72.95 Aligned_cols=125 Identities=18% Similarity=0.194 Sum_probs=84.3
Q ss_pred CcccHHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 666 CRPGVQKAVEACQSAG-VEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 666 lR~~v~~aI~~l~~aG-I~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
+-||+.+.+++|++.| +++.++|+.....+..+.+..||....+ .++.+.+.... .-.
T Consensus 92 ~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd-----~i~~~~~~~~~----------------k~~ 150 (228)
T d2hcfa1 92 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFP-----FGAFADDALDR----------------NEL 150 (228)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCS-----CEECTTTCSSG----------------GGH
T ss_pred ecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhccccccc-----ccccccccccc----------------cch
Confidence 3589999999999987 8999999999999999999999975321 12222111100 001
Q ss_pred HHHHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCC---ccEecCCCchH-HHHHhcCeeeccCCchHHHHHHH
Q 003371 745 PFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEAD---VGLSMGIQGTE-VAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 745 P~dK~~lV~~Lq~~---g~vVa~~GDG~NDapALk~Ad---VGiamg~~gt~-vAk~aaDivlldd~f~sIv~~i~ 813 (825)
|.--...++.+... .+.+.|+||+.+|..|-+.|+ |+++.|....+ ..+..+|+++- ||+.+..++.
T Consensus 151 p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~--~~~el~~~l~ 224 (228)
T d2hcfa1 151 PHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAETDEVLA 224 (228)
T ss_dssp HHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCCHHHHHH
T ss_pred hHHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEEC--CHHHHHHHHH
Confidence 22222233333322 356899999999999999999 55565643333 34446899984 8888888764
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.46 E-value=0.00017 Score=73.72 Aligned_cols=137 Identities=12% Similarity=0.137 Sum_probs=82.6
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccc-cceeeechhhhcCCHHHHHhhccCeeEEEe
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVE-KGEVVEGVEFRNYTDEERIQKVDKIRVMAR 742 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~-~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar 742 (825)
-++|||+++.++.|++.|+.+.++||--.....++++++|+..++.... .....++..+.. .++.- +
T Consensus 134 i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~--------~~~~~-~--- 201 (291)
T d2bdua1 134 VMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLK--------GFKGE-L--- 201 (291)
T ss_dssp CCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEE--------EECSS-C---
T ss_pred CCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEe--------eccCC-c---
Confidence 3589999999999999999999999999999999999999875421100 000011100000 00000 0
Q ss_pred cCHHHHHHHH----HHHHh--CCCEEEEEcCCccCHHHhhh---CCccEecCC--Cch--HH--HHHhcCeeeccCCchH
Q 003371 743 SSPFDKLLMV----QCLKK--KGHVVAVTGDGTNDAPALKE---ADVGLSMGI--QGT--EV--AKESSDIVILDDDFTS 807 (825)
Q Consensus 743 ~sP~dK~~lV----~~Lq~--~g~vVa~~GDG~NDapALk~---AdVGiamg~--~gt--~v--Ak~aaDivlldd~f~s 807 (825)
.....|...+ ..++. ....|.++|||.||.+|.+. ++.+++.|- .-. .. =.++-||||.+|.--.
T Consensus 202 i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~ 281 (291)
T d2bdua1 202 IHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLE 281 (291)
T ss_dssp CCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCH
T ss_pred cccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCChh
Confidence 0111222211 22222 34568899999999999875 344444442 111 11 2378899999987666
Q ss_pred HHHHH
Q 003371 808 VATVL 812 (825)
Q Consensus 808 Iv~~i 812 (825)
++..+
T Consensus 282 v~~~i 286 (291)
T d2bdua1 282 VVNSI 286 (291)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66554
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.41 E-value=0.00014 Score=70.67 Aligned_cols=60 Identities=17% Similarity=0.373 Sum_probs=43.6
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHH
Q 003371 747 DKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVL 812 (825)
Q Consensus 747 dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i 812 (825)
+|..-++.|.++.+ +.++||+.||.+||+.|+-|+||+ .|. ++.+|+..+. +...+..++
T Consensus 159 ~Kg~al~~l~~~~~-~i~~GDs~ND~~Mf~~~~~~~av~-~g~--~~~~A~~~~~--~~~ev~~~l 218 (229)
T d1u02a_ 159 NKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIK-VGE--GETHAKFHVA--DYIEMRKIL 218 (229)
T ss_dssp CHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEE-ESS--SCCCCSEEES--SHHHHHHHH
T ss_pred CHHHHHHHHhcccc-ceeecCCCChHHHHhccCCeEEEE-eCC--CCccCeEEcC--CHHHHHHHH
Confidence 79999999988755 567799999999999997776664 232 2457888875 344444443
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.35 E-value=6.5e-05 Score=73.14 Aligned_cols=125 Identities=22% Similarity=0.307 Sum_probs=86.9
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
.+.|++++.++.|++.|+++.++|+.....+..+.+++||.... ..++.+.+... ....
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f-----~~~~~~~~~~~----------------~kp~ 153 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF-----SEMLGGQSLPE----------------IKPH 153 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC-----SEEECTTTSSS----------------CTTS
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhc-----ccccccccccc----------------cccc
Confidence 45799999999999999999999999999999999999997532 12222222111 1223
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc---cEecCCCc-hHHHHHhcCeeeccCCchHHHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADV---GLSMGIQG-TEVAKESSDIVILDDDFTSVATVL 812 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdV---Giamg~~g-t~vAk~aaDivlldd~f~sIv~~i 812 (825)
|+--..+.+.++-....++|+||..+|..+-+.|++ ++..|... .+.....+|.++- +|+.+++++
T Consensus 154 p~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~--~l~dL~~ii 223 (224)
T d2hsza1 154 PAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADILKIT 223 (224)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGGGGT
T ss_pred chhhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEEC--CHHHHHHhh
Confidence 444444555555556779999999999999999986 44433222 2345556888876 677666543
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.25 E-value=0.00021 Score=69.29 Aligned_cols=119 Identities=15% Similarity=0.183 Sum_probs=81.1
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.++++.|++.|+++.++|+.....+..+.+..|+... ...++.+++... +.-.
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~-----F~~i~~~~~~~~----------------~Kp~ 146 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDS-----FDALASAEKLPY----------------SKPH 146 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG-----CSEEEECTTSSC----------------CTTS
T ss_pred cccchHHHHHHHhhhcccccccccccccccccccccccccccc-----cccccccccccc----------------chhh
Confidence 4569999999999999999999999999999999999999653 223444433221 1122
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCch----HHHHHhcCeeeccCCchH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGT----EVAKESSDIVILDDDFTS 807 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt----~vAk~aaDivlldd~f~s 807 (825)
|+-=..+++.+.-..+.++|+||+.+|..|-+.|++.. ++..+. +.....||.++- +|..
T Consensus 147 ~~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~-i~v~~~~~~~~~~~~~a~~~i~--~l~e 210 (218)
T d1te2a_ 147 PQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRS-IVVPAPEAQNDPRFVLANVKLS--SLTE 210 (218)
T ss_dssp THHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEE-EECCCTTTTTCGGGGGSSEECS--CGGG
T ss_pred HHHHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEE-EEECCCCCccchhhcCCCEEEC--Chhh
Confidence 33233445555444567899999999999999998743 332222 222245787765 4553
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=96.94 E-value=0.00072 Score=67.24 Aligned_cols=128 Identities=17% Similarity=0.211 Sum_probs=86.6
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
.++.||+.++++.|++.|+++.++||.+...+..+-+..|+.... ...++.+.+... ..-
T Consensus 98 ~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f----~d~~~~~d~~~~----------------~KP 157 (257)
T d1swva_ 98 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK----PDFLVTPDDVPA----------------GRP 157 (257)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC----CSCCBCGGGSSC----------------CTT
T ss_pred CccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccc----cccccccccccc----------------ccc
Confidence 357899999999999999999999999999999999999986421 112333332221 122
Q ss_pred CHHHHHHHHHHHHhC-CCEEEEEcCCccCHHHhhhCCc---cEecCCCc---hH---------------------HHHHh
Q 003371 744 SPFDKLLMVQCLKKK-GHVVAVTGDGTNDAPALKEADV---GLSMGIQG---TE---------------------VAKES 795 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~-g~vVa~~GDG~NDapALk~AdV---Giamg~~g---t~---------------------vAk~a 795 (825)
.|..=....+.|.-. .+.++|+||..+|..+=+.|++ |++-|.+- ++ ..+..
T Consensus 158 ~p~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 237 (257)
T d1swva_ 158 YPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENG 237 (257)
T ss_dssp SSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTT
T ss_pred ChHHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCC
Confidence 343334444444432 3568999999999999999985 44444210 00 11122
Q ss_pred cCeeeccCCchHHHHHHH
Q 003371 796 SDIVILDDDFTSVATVLS 813 (825)
Q Consensus 796 aDivlldd~f~sIv~~i~ 813 (825)
||+|+- ++..|..+|+
T Consensus 238 ad~vi~--~l~eL~~ii~ 253 (257)
T d1swva_ 238 AHFTIE--TMQELESVME 253 (257)
T ss_dssp CSEEES--SGGGHHHHHH
T ss_pred CCEEEC--CHHHHHHHHH
Confidence 899987 7888887775
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.78 E-value=0.00054 Score=65.81 Aligned_cols=121 Identities=14% Similarity=0.089 Sum_probs=82.4
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.+++.+.++.++..+ ++.++|+.....++.+.+.+|+.... ..++.+.+. ....
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~f-----d~v~~~~~~------------------~~~~ 139 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFF-----DGIYGSSPE------------------APHK 139 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGC-----SEEEEECSS------------------CCSH
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccc-----ccccccccc------------------cccc
Confidence 56799999999999775 89999999999999999999987532 222322221 1223
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc---cEecCCCchH-HHHHhcCeeeccCCchHHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADV---GLSMGIQGTE-VAKESSDIVILDDDFTSVATV 811 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdV---Giamg~~gt~-vAk~aaDivlldd~f~sIv~~ 811 (825)
|+--..+.+.+.-..+.+.|+||+.||..|-+.|++ ++.-|....+ .....+|+++- ++..+...
T Consensus 140 p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~--~l~el~~~ 208 (210)
T d2ah5a1 140 ADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAH--KPLEVLAY 208 (210)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEES--STTHHHHH
T ss_pred ccccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEEC--CHHHHHHH
Confidence 433333333333334568899999999999999997 5554533333 33344899865 57776654
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.51 E-value=0.0049 Score=59.81 Aligned_cols=125 Identities=17% Similarity=0.147 Sum_probs=81.9
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.++++.|+ +|+++.++|+........+.+.+|+.... ..++...+... ..-.
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~f-----d~i~~s~~~~~----------------~KP~ 157 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLF-----DSITTSEEAGF----------------FKPH 157 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGC-----SEEEEHHHHTB----------------CTTS
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccccc-----ccccccccccc----------------cchh
Confidence 46799999999996 58999999999999999999999986531 22332222221 1111
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCC-ccCHHHhhhCCccE---ecCCCchHHHHHhcCeeeccCCchHHHHHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDG-TNDAPALKEADVGL---SMGIQGTEVAKESSDIVILDDDFTSVATVLSP 814 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG-~NDapALk~AdVGi---amg~~gt~vAk~aaDivlldd~f~sIv~~i~~ 814 (825)
|+-=..+.+.+.-....+.|+||. .+|..+-++|++-. .-+ .......+.+|+++- +++.++.+++.
T Consensus 158 ~~~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~-~~~~~~~~~~d~~i~--~l~el~~~l~~ 228 (230)
T d1x42a1 158 PRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRK-GEKREFWDKCDFIVS--DLREVIKIVDE 228 (230)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTT-SCCGGGGGGSSEEES--STTHHHHHHHH
T ss_pred hHHHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCC-CCCcccccCCCEEEC--CHHHHHHHHHH
Confidence 211122233332234568999997 68999999888742 222 122234457899877 79999888863
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.38 E-value=0.0069 Score=56.81 Aligned_cols=63 Identities=22% Similarity=0.235 Sum_probs=44.5
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE--ec--CCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 749 LLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGL--SM--GIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 749 ~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGi--am--g~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
..+.+.+.-.-+.+.||||..+|..|=+.|+++- .+ |..-.+.....||+|+- ++..++++|+
T Consensus 115 ~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~--~l~dl~~~ik 181 (182)
T d2gmwa1 115 LSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLN--SLADLPQAIK 181 (182)
T ss_dssp HHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEES--CGGGHHHHHH
T ss_pred cchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEEC--CHHHHHHHhc
Confidence 3344444333456899999999999999999852 22 32224556677999877 8999988876
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.27 E-value=0.0016 Score=62.19 Aligned_cols=118 Identities=14% Similarity=0.171 Sum_probs=75.5
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||++++++.|++.|+++.++|+... .+..+-+..||... ...++...+.. ...-.
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~-----f~~i~~s~~~~----------------~~Kp~ 139 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESY-----FTEILTSQSGF----------------VRKPS 139 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGG-----EEEEECGGGCC----------------CCTTS
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccc-----ccccccccccc----------------ccchh
Confidence 4579999999999999999999998554 56678888998753 12222222221 11123
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE-ecCCCchHHHHHhcCeeeccCCchHHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGL-SMGIQGTEVAKESSDIVILDDDFTSVATV 811 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGi-amg~~gt~vAk~aaDivlldd~f~sIv~~ 811 (825)
|+-=..+.+.+.-..+.++|+||+.+|..+-+.|++-. .+. .|+. .+|..+ +++..|.++
T Consensus 140 ~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~-~~~~----~~~~~~--~~~~dl~~l 200 (204)
T d2go7a1 140 PEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFL-ESTY----EGNHRI--QALADISRI 200 (204)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESS-CCSC----TTEEEC--SSTTHHHHH
T ss_pred HHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEc-CCCC----CcCeec--CCHHHHHHH
Confidence 43334444544434567999999999999999998853 343 3432 244443 255555544
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.03 E-value=0.00085 Score=64.35 Aligned_cols=120 Identities=10% Similarity=0.157 Sum_probs=79.3
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.+.++.|+ +++++.++|+-....+..+.++.|+... ...++.+.+... ..-.
T Consensus 82 ~~~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~~~-----f~~i~~~~~~~~----------------~KP~ 139 (207)
T d2hdoa1 82 ELYPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFMMR-----MAVTISADDTPK----------------RKPD 139 (207)
T ss_dssp EECTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGGGG-----EEEEECGGGSSC----------------CTTS
T ss_pred ccccchhhhhhhhc-cccccccccccccccccccccccccccc-----cccccccccccc----------------chhh
Confidence 35699999999997 5799999999999999999999998753 122333322211 1112
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEec---CCCchHHHHHhcCeeeccCCchHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSM---GIQGTEVAKESSDIVILDDDFTSVA 809 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiam---g~~gt~vAk~aaDivlldd~f~sIv 809 (825)
|+--..+++.++-..+.+.|+||..+|..+-++|++...+ | ..+....+.+|.++- ++..|.
T Consensus 140 p~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~i~--~l~dll 204 (207)
T d2hdoa1 140 PLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWG-MDPNADHQKVAHRFQ--KPLDIL 204 (207)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGG-CCTTGGGSCCSEEES--SGGGGG
T ss_pred hhhhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecC-CCChhHhhhcCcEeC--CHHHHH
Confidence 3333344444432335688999999999999999887543 3 233334456777763 565554
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=95.82 E-value=0.0097 Score=53.00 Aligned_cols=107 Identities=16% Similarity=0.279 Sum_probs=69.4
Q ss_pred cCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcccccccCCee
Q 003371 520 SGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVI 599 (825)
Q Consensus 520 ~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~ 599 (825)
+.||..+||+++|.++.+..... ..+.-....||....+..++.+ +|. .+..|++..+...... .|.
T Consensus 29 SeHPlakAIv~~Ak~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~---~g~---~v~~G~~~~~~~~~~~----~g~- 95 (136)
T d2a29a1 29 DETPEGRSIVILAKQRFNLRERD--VQSLHATFVPFTAQSRMSGINI---DNR---MIRKGSVDAIRRHVEA----NGG- 95 (136)
T ss_dssp CCSHHHHHHHHHHHHHHCCCCCC--TTTTTCEEEEEETTTTEEEEEE---TTE---EEEEECHHHHHHHHHH----HTC-
T ss_pred CCchHHHHHHHHHHHhcCCCccc--cccccccccccccccceEEEEE---CCE---EEEecHHHHHHHHHHH----cCC-
Confidence 66999999999998443332111 1122234456666666555543 343 3456999877654321 111
Q ss_pred ecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCc
Q 003371 600 KSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCR 667 (825)
Q Consensus 600 ~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR 667 (825)
.....+.+.++.++.+|..++.+|. |-.++|++++.|+++
T Consensus 96 -----~~~~~~~~~~~~~~~~G~Tvv~Va~-----------------------d~~~~G~i~l~D~iK 135 (136)
T d2a29a1 96 -----HFPTDVDQKVDQVARQGATPLVVVE-----------------------GSRVLGVIALKDIVK 135 (136)
T ss_dssp -----CCCHHHHHHHHHHHHTTSEEEEEEE-----------------------TTEEEEEEEEEESSC
T ss_pred -----CCcHHHHHHHHHHHHCCCeEEEEEE-----------------------CCEEEEEEEEEeecC
Confidence 1234577888999999999999986 347999999999986
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.81 E-value=0.0092 Score=54.84 Aligned_cols=88 Identities=10% Similarity=-0.011 Sum_probs=61.9
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDN-VFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~-~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
++.||+.++++.|++.|+++.++|.-+ ...++.+-+..++..... .+....
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~----------------------------~~~~~~ 97 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFI----------------------------QREIYP 97 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCS----------------------------EEEESS
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccce----------------------------eeeccc
Confidence 478999999999999999999999654 566777777777653211 023333
Q ss_pred CHHHH--HHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc
Q 003371 744 SPFDK--LLMVQCLKKKGHVVAVTGDGTNDAPALKEADV 780 (825)
Q Consensus 744 sP~dK--~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdV 780 (825)
.|..+ ..+.+.+.-..+.+.|+||..+|..+-++|++
T Consensus 98 kp~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~ 136 (164)
T d1u7pa_ 98 GSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGV 136 (164)
T ss_dssp SCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTC
T ss_pred CCChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCC
Confidence 34433 23333333335678899999999999999977
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=95.81 E-value=0.013 Score=56.71 Aligned_cols=119 Identities=16% Similarity=0.073 Sum_probs=79.2
Q ss_pred cCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEe
Q 003371 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMAR 742 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar 742 (825)
.-.+.||+.+.++.|++.|+++.++|+........+...+|+...... .+....+. ...+
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~----~~~~~d~~----------------~~~K 184 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILEL----VDGHFDTK----------------IGHK 184 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGG----CSEEECGG----------------GCCT
T ss_pred ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhh----cceeeccc----------------cccC
Confidence 345689999999999999999999999999999999999998643110 00000000 0112
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEec----CCCchHHHHHhcCeeec
Q 003371 743 SSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSM----GIQGTEVAKESSDIVIL 801 (825)
Q Consensus 743 ~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiam----g~~gt~vAk~aaDivll 801 (825)
-.|+-=....+.+.-.-+.++|+||..+|+.+-++|++-... |.....-....++.+|.
T Consensus 185 P~p~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~ 247 (253)
T d1zs9a1 185 VESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 247 (253)
T ss_dssp TCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred CCcHHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEEC
Confidence 223222333344433356789999999999999999985544 43444445566777765
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.42 E-value=0.0042 Score=60.11 Aligned_cols=45 Identities=20% Similarity=0.339 Sum_probs=33.1
Q ss_pred HHHHHHHHHHhC-CCEEEEEcC----CccCHHHhhhCC-ccEecCCCchHHH
Q 003371 747 DKLLMVQCLKKK-GHVVAVTGD----GTNDAPALKEAD-VGLSMGIQGTEVA 792 (825)
Q Consensus 747 dK~~lV~~Lq~~-g~vVa~~GD----G~NDapALk~Ad-VGiamg~~gt~vA 792 (825)
+|..-++.|.+. .+-|+++|| |-||.+||+.|+ .|++++ +..|+-
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~-~~~~~~ 235 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APEDTR 235 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHHHH
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeC-CHHHHH
Confidence 677777766543 567899999 789999999997 788887 555543
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.40 E-value=0.021 Score=53.28 Aligned_cols=109 Identities=18% Similarity=0.090 Sum_probs=72.9
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+++.++.+++.|+++.++|+-...+. .+-+.+|+... ...++.+.++..- .-.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~-----fd~i~~~~~~~~~----------------KP~ 136 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAY-----FTEVVTSSSGFKR----------------KPN 136 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGG-----EEEEECGGGCCCC----------------TTS
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccc-----ccccccccccccc----------------CCC
Confidence 5679999999999999999999999766554 56788888653 2223333332211 111
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCe
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDI 798 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDi 798 (825)
|+--..+.+.+. -..+.|+||..+|..|-++|++=.. +..+.+-.++.-||
T Consensus 137 p~~~~~~~~~~~--~~~~l~vgDs~~Di~aA~~aG~~~i-~v~~~~~~~~~~d~ 187 (187)
T d2fi1a1 137 PESMLYLREKYQ--ISSGLVIGDRPIDIEAGQAAGLDTH-LFTSIVNLRQVLDI 187 (187)
T ss_dssp CHHHHHHHHHTT--CSSEEEEESSHHHHHHHHHTTCEEE-ECSCHHHHHHHHTC
T ss_pred HHHHHHHHHHcC--CCCeEEEeCCHHHHHHHHHcCCEEE-EECCCCChHhhcCC
Confidence 222222333332 2347899999999999999987754 34677778887775
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.64 E-value=0.051 Score=51.94 Aligned_cols=142 Identities=22% Similarity=0.282 Sum_probs=93.3
Q ss_pred ccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccc--cc-cceee-ec--h-------hhhcCCHHH-----
Q 003371 668 PGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQ--VE-KGEVV-EG--V-------EFRNYTDEE----- 729 (825)
Q Consensus 668 ~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~--~~-~~~vi-~G--~-------~~~~~~~~~----- 729 (825)
||+.++++.++++ ....++|---.+-.+++|+.+|+...... .. ...-+ +| + ...+.+.++
T Consensus 84 pgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~e~~ 162 (308)
T d1y8aa1 84 PDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELFRKL 162 (308)
T ss_dssp TTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCceeecccccccccCCChHHHHHHHHHhhhccCccHHHHHHHH
Confidence 9999999999987 68888888888999999999999621000 00 00000 00 0 000111122
Q ss_pred --------HHhhccCeeEEEecCHHHHHHHHHHHHhC-C-CEEEEEcCCccCHHHhhhCCc--cEecCCCchHHHHHhcC
Q 003371 730 --------RIQKVDKIRVMARSSPFDKLLMVQCLKKK-G-HVVAVTGDGTNDAPALKEADV--GLSMGIQGTEVAKESSD 797 (825)
Q Consensus 730 --------~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~-g-~vVa~~GDG~NDapALk~AdV--Giamg~~gt~vAk~aaD 797 (825)
...++.+++..+. ..|..+++..-.. + ..-+++||++.|..+|+.|.= |+|+.-+|.+-|...||
T Consensus 163 d~~f~~~e~~~i~e~Vk~VGg---g~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal~eA~ 239 (308)
T d1y8aa1 163 DELFSRSEVRKIVESVKAVGA---GEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYALKHAD 239 (308)
T ss_dssp HHHHHSHHHHHHHHTCBCCCH---HHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHHTTCS
T ss_pred HHHhccchHhhHHhhhcccCC---chhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCccccccccc
Confidence 2223344444332 5666666554322 2 223779999999999999853 77777789999999999
Q ss_pred eeeccCCchHHHHHHH
Q 003371 798 IVILDDDFTSVATVLS 813 (825)
Q Consensus 798 ivlldd~f~sIv~~i~ 813 (825)
|.+...+-.++..++.
T Consensus 240 VaiiS~~~~a~~~i~d 255 (308)
T d1y8aa1 240 VVIISPTAMSEAKVIE 255 (308)
T ss_dssp EEEECSSTHHHHHHHH
T ss_pred eEEeccchhHHHHHHH
Confidence 9999888888777764
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.44 E-value=0.033 Score=54.08 Aligned_cols=125 Identities=13% Similarity=0.133 Sum_probs=79.7
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.++++.|++ |+++.++|+.........-+.+|+.... ..++.+.+... +.-+
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f-----d~i~~s~~~~~----------------~KP~ 166 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYF-----DAIVIGGEQKE----------------EKPA 166 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGC-----SEEEEGGGSSS----------------CTTC
T ss_pred ccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccccc-----ccccccccccc----------------chhh
Confidence 367999999999985 8999999999999999999999987532 12333322221 1111
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCc-cCHHHhhhCCccEecCCCchH----HHHHhcCeeeccCCchHHHHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGT-NDAPALKEADVGLSMGIQGTE----VAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~-NDapALk~AdVGiamg~~gt~----vAk~aaDivlldd~f~sIv~~i~ 813 (825)
|+==..+.+.+.-..+.+.|+||.. +|..+-+.|++.-....++.. -....+|+++- ++..+..+++
T Consensus 167 p~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~--~l~eL~~ll~ 238 (247)
T d2gfha1 167 PSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELPALLQ 238 (247)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHHHHHH
T ss_pred hhhHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEEC--CHHHHHHHHH
Confidence 1111222333332345688999985 899999999986332111111 12233688776 6888888775
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=94.38 E-value=0.0075 Score=54.17 Aligned_cols=98 Identities=15% Similarity=0.030 Sum_probs=60.4
Q ss_pred cCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhh--ccCeeEE
Q 003371 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQK--VDKIRVM 740 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~--~~~~~V~ 740 (825)
+|++.|++.+.++.++++|+++.++||-+...+..+-+.++... ...... .+....+
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~---------------------~~~~~~~~~~~~~~~ 92 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTR---------------------KWVEDIAGVPLVMQC 92 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHH---------------------HHHHHTTCCCCSEEE
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHh---------------------hhhhhcCCCcEEEee
Confidence 57889999999999999999999999976322211111111000 000000 0001111
Q ss_pred E------ecCHHHHHHHHHHHHhC-CCEEEEEcCCccCHHHhhhCCcc
Q 003371 741 A------RSSPFDKLLMVQCLKKK-GHVVAVTGDGTNDAPALKEADVG 781 (825)
Q Consensus 741 a------r~sP~dK~~lV~~Lq~~-g~vVa~~GDG~NDapALk~AdVG 781 (825)
. |-.+.-|..+.+.+... ..+++|+||-..|+.|.++++|=
T Consensus 93 ~~~~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 93 QREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp ECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred cccccccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCc
Confidence 1 22345677777666554 55678899999999999998764
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=93.64 E-value=0.022 Score=54.20 Aligned_cols=85 Identities=18% Similarity=0.209 Sum_probs=61.5
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCC----HHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEE
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDN----VFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMA 741 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~----~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~a 741 (825)
+-|++.+.++.+++.|++|+.|||.. ..|++.+-+.+|+...... .+ ++.
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~---~v-----------------------ll~ 140 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMN---PV-----------------------IFA 140 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBC---CC-----------------------EEC
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCccccc---ce-----------------------Eee
Confidence 45899999999999999999999964 4577777788898653211 11 222
Q ss_pred ecC--HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc
Q 003371 742 RSS--PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADV 780 (825)
Q Consensus 742 r~s--P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdV 780 (825)
+.. ...|...|+ + -.+++++||..+|..|-++|++
T Consensus 141 ~~~~~K~~rr~~Ik---~-y~I~l~~GD~l~Df~aA~eagi 177 (209)
T d2b82a1 141 GDKPGQNTKSQWLQ---D-KNIRIFYGDSDNDITAARDVGA 177 (209)
T ss_dssp CCCTTCCCSHHHHH---H-TTEEEEEESSHHHHHHHHHTTC
T ss_pred CCCCCchHHHHHHH---H-cCeEEEecCCHHHHhHHHHcCC
Confidence 222 133555553 3 4689999999999999999975
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=91.88 E-value=0.11 Score=49.06 Aligned_cols=124 Identities=10% Similarity=0.035 Sum_probs=81.5
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
..+.+++.++++.+++.|+++.++|+-.......+-+..|+.... ..++...+... ..-
T Consensus 92 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~f-----d~~~~s~~~~~----------------~KP 150 (220)
T d1zrna_ 92 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF-----DHLLSVDPVQV----------------YKP 150 (220)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC-----SEEEESGGGTC----------------CTT
T ss_pred ccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccc-----cceeeeeeeec----------------ccc
Confidence 345789999999999999999999999999999999988887542 22333333221 111
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCC---CchHHHHHhcCeeeccCCchHHHH
Q 003371 744 SPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGI---QGTEVAKESSDIVILDDDFTSVAT 810 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~---~gt~vAk~aaDivlldd~f~sIv~ 810 (825)
.|+-=....+.+.-.-+.++|+||..+|.-+-++|++--..-. ...+-....+|.++- +|..|++
T Consensus 151 ~p~~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~--~l~el~~ 218 (220)
T d1zrna_ 151 DNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVE 218 (220)
T ss_dssp SHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHT
T ss_pred HHHHHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEEC--CHHHHHh
Confidence 2222223334443334568999999999999999987644211 111112344788874 6777664
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=91.48 E-value=0.07 Score=50.57 Aligned_cols=91 Identities=11% Similarity=0.165 Sum_probs=62.9
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
.++-||+.+.++.|++.|+++.++|+... +..+-+..|+... ...++.+.+... .
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~-----f~~i~~~~~~~~------------------~ 144 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGY-----FDAIADPAEVAA------------------S 144 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGG-----CSEECCTTTSSS------------------C
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhccccc-----cccccccccccc------------------c
Confidence 45679999999999999999999999754 5678888898763 222333332221 1
Q ss_pred CHHHHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCc
Q 003371 744 SPFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADV 780 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~---g~vVa~~GDG~NDapALk~AdV 780 (825)
.|.- ..+-+.+++. .+-+.|+||..+|..|-+.|++
T Consensus 145 KP~~-~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~ 183 (221)
T d1o08a_ 145 KPAP-DIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGA 183 (221)
T ss_dssp TTST-HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTC
T ss_pred ccCh-HHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCC
Confidence 2221 1233344443 4568899999999999999986
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=91.09 E-value=0.034 Score=54.58 Aligned_cols=35 Identities=17% Similarity=0.282 Sum_probs=30.9
Q ss_pred ccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc
Q 003371 668 PGVQKAVEACQSAGVEIKMITGDNVFTAKAIATEC 702 (825)
Q Consensus 668 ~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~ 702 (825)
|++.++|+.|+++|++++.+|+....+...+++++
T Consensus 21 ~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 21 PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 89999999999999999999998877777777654
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=91.03 E-value=0.18 Score=47.41 Aligned_cols=107 Identities=12% Similarity=0.127 Sum_probs=69.0
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcC----CCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEE
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITG----DNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVM 740 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTG----D~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ 740 (825)
.++|++.+.++.|+++|+++.++|+ .............|+... ...++.+.+...
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~-----fd~i~~s~~~~~---------------- 155 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQH-----FDFLIESCQVGM---------------- 155 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGG-----CSEEEEHHHHSC----------------
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhh-----hceeeehhhccC----------------
Confidence 3579999999999999999999996 334445555666676542 122333333221
Q ss_pred EecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc-cEecCCCchHHHH
Q 003371 741 ARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADV-GLSMGIQGTEVAK 793 (825)
Q Consensus 741 ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdV-Giamg~~gt~vAk 793 (825)
..-.|+--....+.++-.-+-+.|+||..+|..+-+.|++ +|-+. ++.+...
T Consensus 156 ~KP~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~-~~~~~~~ 208 (222)
T d1cr6a1 156 IKPEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVH-NTASALR 208 (222)
T ss_dssp CTTCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECC-SSSHHHH
T ss_pred CCCChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEEC-CcchHHH
Confidence 1224444455556665455668899999999999999987 44443 4444433
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=90.63 E-value=0.29 Score=47.64 Aligned_cols=62 Identities=18% Similarity=0.257 Sum_probs=39.8
Q ss_pred HHHHHHHhCCCEEEEEcCCc-cCHHHhhhCCc-cEec--CCCchHHHHHh---cCeeeccCCchHHHHHHH
Q 003371 750 LMVQCLKKKGHVVAVTGDGT-NDAPALKEADV-GLSM--GIQGTEVAKES---SDIVILDDDFTSVATVLS 813 (825)
Q Consensus 750 ~lV~~Lq~~g~vVa~~GDG~-NDapALk~AdV-Giam--g~~gt~vAk~a---aDivlldd~f~sIv~~i~ 813 (825)
.+.+.+.-.-+.++|+||.. +|..+-+.|++ ++.+ |....+-...+ .|+++- ++..|.++|+
T Consensus 193 ~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~--~l~eL~~~l~ 261 (261)
T d1vjra_ 193 VISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFK--NLGELAKAVQ 261 (261)
T ss_dssp HHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEES--SHHHHHHHHC
T ss_pred HHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEEC--CHHHHHHHhC
Confidence 34444433456789999995 69999999986 4444 32222222222 388877 8888887763
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=89.27 E-value=0.34 Score=45.48 Aligned_cols=123 Identities=13% Similarity=0.137 Sum_probs=76.6
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
.+.|++.+.++.++ .+..++|+-....+..+-+.+|+..... ..+..+..... .+..
T Consensus 85 ~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~~~----------------~~~K 141 (222)
T d2fdra1 85 KIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFA----PHIYSAKDLGA----------------DRVK 141 (222)
T ss_dssp CBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTT----TCEEEHHHHCT----------------TCCT
T ss_pred chhhhHHHHhhhcc---ccceeeeecchhhhhhhhcccccccccc----eeecccccccc----------------cccc
Confidence 46788888887775 4557899999999999999999986421 12222222110 1122
Q ss_pred HH--HHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc---cEecCCCc-----hHHHHHhcCeeeccCCchHHHHHH
Q 003371 745 PF--DKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADV---GLSMGIQG-----TEVAKESSDIVILDDDFTSVATVL 812 (825)
Q Consensus 745 P~--dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdV---Giamg~~g-----t~vAk~aaDivlldd~f~sIv~~i 812 (825)
|. -=....+.+.-..+.+.|+||..+|..+-+.|++ |++-|... .+....-+|+++- ++..+..++
T Consensus 142 P~~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~--~l~eL~~ll 217 (222)
T d2fdra1 142 PKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVIS--RMQDLPAVI 217 (222)
T ss_dssp TSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEES--CGGGHHHHH
T ss_pred cCHHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEEC--CHHHHHHHH
Confidence 32 2122333333334679999999999999999986 44333111 1123334899988 676666655
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=89.24 E-value=0.87 Score=42.98 Aligned_cols=125 Identities=13% Similarity=0.140 Sum_probs=79.7
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
.++.|++.+++++++ |+.+.++|.-+...+..+-+..|+... ...++.+.+.... .-
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~-----fd~v~~s~~~~~~----------------KP 148 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDS-----FDAVISVDAKRVF----------------KP 148 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGG-----CSEEEEGGGGTCC----------------TT
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccc-----ccccccccccccc----------------Cc
Confidence 456789999999886 788999999999999999999998764 2234444443321 11
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE-ecCCCchHH-H------------------------HHhcC
Q 003371 744 SPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGL-SMGIQGTEV-A------------------------KESSD 797 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGi-amg~~gt~v-A------------------------k~aaD 797 (825)
.|+-=...++.+.-.-+-+.|+||..+|.-+=++|++-- .+...|.+. . ....|
T Consensus 149 ~p~~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd 228 (245)
T d1qq5a_ 149 HPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPD 228 (245)
T ss_dssp SHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCS
T ss_pred cHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCC
Confidence 122112233333333345899999999999999987531 111111110 0 11378
Q ss_pred eeeccCCchHHHHHHH
Q 003371 798 IVILDDDFTSVATVLS 813 (825)
Q Consensus 798 ivlldd~f~sIv~~i~ 813 (825)
+++. ++..++.+|+
T Consensus 229 ~~i~--~l~el~~lv~ 242 (245)
T d1qq5a_ 229 FVVP--ALGDLPRLVR 242 (245)
T ss_dssp EEES--SGGGHHHHHH
T ss_pred EEEC--CHHHHHHHHH
Confidence 8885 8999998875
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.53 E-value=0.32 Score=45.22 Aligned_cols=100 Identities=10% Similarity=0.083 Sum_probs=59.3
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHH----HHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEE
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKA----IATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVM 740 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~a----IA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ 740 (825)
.+.|++.++++.|++.|+++.++|......... .-...|+... ...++.+.+...
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~-----fd~i~~s~~~~~---------------- 157 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMH-----FDFLIESCQVGM---------------- 157 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTT-----SSEEEEHHHHTC----------------
T ss_pred CCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhh-----ccEEEecccccc----------------
Confidence 357999999999999999999999754433322 2223333221 112232222211
Q ss_pred EecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc-cEecC
Q 003371 741 ARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADV-GLSMG 785 (825)
Q Consensus 741 ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdV-Giamg 785 (825)
..-.|+-=..+++.+.-...-++|+||...|..+-++|++ +|.+.
T Consensus 158 ~KP~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~ 203 (225)
T d1zd3a1 158 VKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQ 203 (225)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECS
T ss_pred chhHHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEEC
Confidence 1112222233334443333567799999999999999988 55554
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=86.80 E-value=0.4 Score=45.32 Aligned_cols=24 Identities=25% Similarity=0.513 Sum_probs=22.4
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcC
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITG 689 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTG 689 (825)
+-||+.++++.|+++|+++.++|-
T Consensus 49 l~pgv~e~L~~L~~~G~~l~IvTN 72 (209)
T d2o2xa1 49 LRPQMLPAIATANRAGIPVVVVTN 72 (209)
T ss_dssp BCGGGHHHHHHHHHHTCCEEEEEE
T ss_pred ecccHHHHHHHHHhhCCeEEEecc
Confidence 569999999999999999999994
|